National Library of Energy BETA

Sample records for vcrs visual contrast

  1. HPC Visualization

    SciTech Connect (OSTI)

    Monroe, Laura Marie

    2015-04-28

    A brief overview of the Los Alamos National Laboratory’s visualization capabilities and how projects benefits from these.

  2. Nessus Visualization

    Energy Science and Technology Software Center (OSTI)

    2012-10-01

    NV is a visualization tool for exploring vulnerabilities within a network. The data is created with a vulnerability assessment tool, such as Nessus (http://www.tenable.com/products/nessus).

  3. Visual Breakout

    Broader source: Energy.gov [DOE]

    Visual Breakout of the Cummulative Barrels of Oil Recovered by the Discoverer Enterprise, Q4000 and HP1. Updated through 12:00 AM on July 16, 2010.

  4. VISUAL-SOLAR

    Energy Science and Technology Software Center (OSTI)

    003661IBMPC00 Visual-SOLAR: Modeling and Visualization of Solar Radiation Potential on Individual Building Rooftops

  5. Nuclear magnetic resonance contrast agents

    DOE Patents [OSTI]

    Smith, P.H.; Brainard, J.R.; Jarvinen, G.D.; Ryan, R.R.

    1997-12-30

    A family of contrast agents for use in magnetic resonance imaging and a method of enhancing the contrast of magnetic resonance images of an object by incorporating a contrast agent of this invention into the object prior to forming the images or during formation of the images. A contrast agent of this invention is a paramagnetic lanthanide hexaazamacrocyclic molecule, where a basic example has the formula LnC{sub 16}H{sub 14}N{sub 6}. Important applications of the invention are in medical diagnosis, treatment, and research, where images of portions of a human body are formed by means of magnetic resonance techniques. 10 figs.

  6. Nuclear magnetic resonance contrast agents

    DOE Patents [OSTI]

    Smith, Paul H.; Brainard, James R.; Jarvinen, Gordon D.; Ryan, Robert R.

    1997-01-01

    A family of contrast agents for use in magnetic resonance imaging and a method of enhancing the contrast of magnetic resonance images of an object by incorporating a contrast agent of this invention into the object prior to forming the images or during formation of the images. A contrast agent of this invention is a paramagnetic lanthanide hexaazamacrocyclic molecule, where a basic example has the formula LnC.sub.16 H.sub.14 N.sub.6. Important applications of the invention are in medical diagnosis, treatment, and research, where images of portions of a human body are formed by means of magnetic resonance techniques.

  7. ESnet Visualization Widgets

    Energy Science and Technology Software Center (OSTI)

    2012-07-01

    The ESnet Visualization widgets are various data visualization widgets for use in web browsers to aid in the visualization of computer networks. In particular the widgets are targetted at displaying timeseries and topology data. They were developed for use in the MyESnet portal but are general enough to be used other places. The widgets are built using the d3.js library.

  8. Development of neutron tomography and phase contrast imaging technique

    SciTech Connect (OSTI)

    Kashyap, Y. S.; Agrawal, Ashish; Sarkar, P. S.; Shukla, Mayank; Sinha, Amar

    2013-02-05

    This paper presents design and development of a state of art neutron imaging technique at CIRUS reactor with special reference for techniques adopted for tomography and phase contrast imaging applications. Different components of the beamline such as collimator, shielding, sample manipulator, digital imaging system were designed keeping in mind the requirements of data acquisition time and resolution. The collimator was designed in such a way that conventional and phase contrast imaging can be done using same collimator housing. We have done characterization of fuel pins, study of hydride blisters in pressure tubes hydrogen based cells, two phase flow visualization, and online study of locomotive parts etc. using neutron tomography and radiography technique. We have also done some studies using neutron phase contrast imaging technique on this beamline.

  9. Visual Resources | Open Energy Information

    Open Energy Info (EERE)

    Visual Resources Jump to: navigation, search Retrieved from "http:en.openei.orgwindex.php?titleVisualResources&oldid612333...

  10. Contrasting soil microbial community functional structures in...

    Office of Scientific and Technical Information (OSTI)

    Contrasting soil microbial community functional structures in two major landscapes of the Tibetan alpine meadow Prev Next Title: Contrasting soil microbial community...

  11. Visualization of electronic density

    DOE Public Access Gateway for Energy & Science Beta (PAGES Beta)

    Grosso, Bastien; Cooper, Valentino R.; Pine, Polina; Hashibon, Adham; Yaish, Yuval; Adler, Joan

    2015-04-22

    An atom’s volume depends on its electronic density. Although this density can only be evaluated exactly for hydrogen-like atoms, there are many excellent numerical algorithms and packages to calculate it for other materials. 3D visualization of charge density is challenging, especially when several molecular/atomic levels are intertwined in space. We explore several approaches to 3D charge density visualization, including the extension of an anaglyphic stereo visualization application based on the AViz package to larger structures such as nanotubes. We will describe motivations and potential applications of these tools for answering interesting questions about nanotube properties.

  12. Visualization of electronic density

    SciTech Connect (OSTI)

    Grosso, Bastien; Cooper, Valentino R.; Pine, Polina; Hashibon, Adham; Yaish, Yuval; Adler, Joan

    2015-04-22

    An atoms volume depends on its electronic density. Although this density can only be evaluated exactly for hydrogen-like atoms, there are many excellent numerical algorithms and packages to calculate it for other materials. 3D visualization of charge density is challenging, especially when several molecular/atomic levels are intertwined in space. We explore several approaches to 3D charge density visualization, including the extension of an anaglyphic stereo visualization application based on the AViz package to larger structures such as nanotubes. We will describe motivations and potential applications of these tools for answering interesting questions about nanotube properties.

  13. Visualizations Image Gallery

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Act NIMROD 1 NIMROD Simulation 744889477276295a0862c.jpg A new Approach to Water Desalination map800-600.jpg Planck Cosmic Microwave Background electrons0000.png Visualization ...

  14. Notes for Visualization Requirememnts

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Notes for Vis Requirements Notes for Visualization Requirememnts Notes from June 5, 2002, Visualization Requirements for DOE-Sponsored Computational Science and Engineering Applications A DOE Workshop to Be Held 
at Lawrence Berkeley National Laboratory,
Berkeley, California, June 5, 2002 Workshop Co-organizers: Bernd Hamann 
University of California-Davis Lawrence Berkeley National Lab. E. Wes Bethel 
Lawrence Berkeley National Lab. Horst D. Simon
Lawrence Berkeley National Lab.

  15. Extreme Scale Visual Analytics

    SciTech Connect (OSTI)

    Steed, Chad A; Potok, Thomas E; Pullum, Laura L; Ramanathan, Arvind; Shipman, Galen M; Thornton, Peter E; Potok, Thomas E

    2013-01-01

    Given the scale and complexity of today s data, visual analytics is rapidly becoming a necessity rather than an option for comprehensive exploratory analysis. In this paper, we provide an overview of three applications of visual analytics for addressing the challenges of analyzing climate, text streams, and biosurveilance data. These systems feature varying levels of interaction and high performance computing technology integration to permit exploratory analysis of large and complex data of global significance.

  16. TRANSIMS Visualizations at TRACC

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Visualizations at TRACC TRACC is currently actively developing two separate visualization applications. One of these applications is 'Metropolis', developed by NCSA (the National Center for Supercomputing Applications), targets an interactive model that allows a modeler to navigate in three-dimensional space and time while displaying moving vehicles, dynamic volumes on the links, and many more such dynamic network features. The software is being developed based on OpenGL, and is comparable to

  17. Visualizations for Real-time Pricing Demonstration

    SciTech Connect (OSTI)

    Marinovici, Maria C.; Hammerstrom, Janelle L.; Widergren, Steven E.; Dayley, Greg K.

    2014-10-13

    In this paper, the visualization tools created for monitoring the operations of a real-time pricing demonstration system that runs at a distribution feeder level are presented. The information these tools provide gives insights into demand behavior from automated price responsive devices, distribution feeder characteristics, impact of weather on system’s development, and other significant dynamics. Given the large number of devices that bid into a feeder-level real-time electricity market, new techniques are explored to summarize the present state of the system and contrast that with previous trends as well as future projections. To better understand the system behavior and correctly inform decision-making procedures, effective visualization of the data is imperative.

  18. Robotic Intelligence Kernel: Visualization

    Energy Science and Technology Software Center (OSTI)

    2009-09-16

    The INL Robotic Intelligence Kernel-Visualization is the software that supports the user interface. It uses the RIK-C software to communicate information to and from the robot. The RIK-V illustrates the data in a 3D display and provides an operating picture wherein the user can task the robot.

  19. Multi-step contrast sensitivity gauge

    DOE Patents [OSTI]

    Quintana, Enrico C; Thompson, Kyle R; Moore, David G; Heister, Jack D; Poland, Richard W; Ellegood, John P; Hodges, George K; Prindville, James E

    2014-10-14

    An X-ray contrast sensitivity gauge is described herein. The contrast sensitivity gauge comprises a plurality of steps of varying thicknesses. Each step in the gauge includes a plurality of recesses of differing depths, wherein the depths are a function of the thickness of their respective step. An X-ray image of the gauge is analyzed to determine a contrast-to-noise ratio of a detector employed to generate the image.

  20. Contrasting soil microbial community functional structures in...

    Office of Scientific and Technical Information (OSTI)

    two major landscapes of the Tibetan alpine meadow Prev Next Title: Contrasting soil microbial community functional structures in two major landscapes of the Tibetan alpine...

  1. Visualization | OpenEI Community

    Open Energy Info (EERE)

    Enabling Unique Visualization and Manipulation of Energy Data at Multiple Scales FRED Free Energy Data Map OpenEI Tool Visualization The U.S. Department of Energy, the Pacific...

  2. Incompatibility of Contrast Medium and Trisodium Citrate

    SciTech Connect (OSTI)

    Delcour, Christian Bruninx, Guy

    2013-02-15

    To test the compatibility of trisodium citrate, a catheter lock solution, with iodinated contrast medium. Iohexol, iobitridol, iodixanol, ioxaglate, ioxithalamate, iomeprol, and iopromide were tested. In all tests, 2 ml of contrast medium were mixed with 2 ml of trisodium citrate solution. Iodixanol and ioxaglate provoked a highly viscous gluelike precipitation when mixed with trisodium citrate. A brief transient precipitate was observed with iohexol, iomeprol, and ioxithalamate. Permanent precipitation occurred with iobitridol and iopromide. One must be aware of the potential for precipitation when contrast medium is mixed with trisodium citrate solution. Before trisodium citrate solution is injected, the catheter should be thoroughly flushed with saline if a contrast medium has previously been injected through it.

  3. X-ray computed tomography of wood-adhesive bondlines: Attenuation and phase-contrast effects

    DOE Public Access Gateway for Energy & Science Beta (PAGES Beta)

    Paris, Jesse L.; Kamke, Frederick A.; Xiao, Xianghui

    2015-07-29

    Microscale X-ray computed tomography (XCT) is discussed as a technique for identifying 3D adhesive distribution in wood-adhesive bondlines. Visualization and material segmentation of the adhesives from the surrounding cellular structures require sufficient gray-scale contrast in the reconstructed XCT data. Commercial wood-adhesive polymers have similar chemical characteristics and density to wood cell wall polymers and therefore do not provide good XCT attenuation contrast in their native form. Here, three different adhesive types, namely phenol formaldehyde, polymeric diphenylmethane diisocyanate, and a hybrid polyvinyl acetate, are tagged with iodine such that they yield sufficient X-ray attenuation contrast. However, phase-contrast effects at material edgesmore » complicate image quality and segmentation in XCT data reconstructed with conventional filtered backprojection absorption contrast algorithms. A quantitative phase retrieval algorithm, which isolates and removes the phase-contrast effect, was demonstrated. The paper discusses and illustrates the balance between material X-ray attenuation and phase-contrast effects in all quantitative XCT analyses of wood-adhesive bondlines.« less

  4. Methods of visualizing graphs

    DOE Patents [OSTI]

    Wong, Pak C.; Mackey, Patrick S.; Perrine, Kenneth A.; Foote, Harlan P.; Thomas, James J.

    2008-12-23

    Methods for visualizing a graph by automatically drawing elements of the graph as labels are disclosed. In one embodiment, the method comprises receiving node information and edge information from an input device and/or communication interface, constructing a graph layout based at least in part on that information, wherein the edges are automatically drawn as labels, and displaying the graph on a display device according to the graph layout. In some embodiments, the nodes are automatically drawn as labels instead of, or in addition to, the label-edges.

  5. Assessment of contrast enhanced respiration managed cone-beam CT for image guided radiotherapy of intrahepatic tumors

    SciTech Connect (OSTI)

    Jensen, Nikolaj K. G.; Stewart, Errol; Imaging Research Lab, Robarts Research Institute, London, Ontario N6A 5B7; Imaging Program, Lawson Health Research Institute, London, Ontario N6C 2R5 ; Lock, Michael; Fisher, Barbara; Department of Oncology, University of Western Ontario, London, Ontario N6A 4L6 ; Kozak, Roman; Chen, Jeff; Department of Oncology, University of Western Ontario, London, Ontario N6A 4L6; Department of Medical Biophysics, University of Western Ontario, London, Ontario N6A 5C1 ; Lee, Ting-Yim; Imaging Research Lab, Robarts Research Institute, London, Ontario N6A 5B7; Imaging Program, Lawson Health Research Institute, London, Ontario N6C 2R5; Department of Oncology, University of Western Ontario, London, Ontario N6A 4L6; Department of Medical Biophysics, University of Western Ontario, London, Ontario N6A 5C1 ; Wong, Eugene; Department of Oncology, University of Western Ontario, London, Ontario N6A 4L6; Department of Medical Biophysics, University of Western Ontario, London, Ontario N6A 5C1; Department of Physics and Astronomy, University of Western Ontario, London, Ontario N6A 3K7

    2014-05-15

    Purpose: Contrast enhancement and respiration management are widely used during image acquisition for radiotherapy treatment planning of liver tumors along with respiration management at the treatment unit. However, neither respiration management nor intravenous contrast is commonly used during cone-beam CT (CBCT) image acquisition for alignment prior to radiotherapy. In this study, the authors investigate the potential gains of injecting an iodinated contrast agent in combination with respiration management during CBCT acquisition for liver tumor radiotherapy. Methods: Five rabbits with implanted liver tumors were subjected to CBCT with and without motion management and contrast injection. The acquired CBCT images were registered to the planning CT to determine alignment accuracy and dosimetric impact. The authors developed a simulation tool for simulating contrast-enhanced CBCT images from dynamic contrast enhanced CT imaging (DCE-CT) to determine optimal contrast injection protocols. The tool was validated against contrast-enhanced CBCT of the rabbit subjects and was used for five human patients diagnosed with hepatocellular carcinoma. Results: In the rabbit experiment, when neither motion management nor contrast was used, tumor centroid misalignment between planning image and CBCT was 9.2 mm. This was reduced to 2.8?mm when both techniques were employed. Tumors were not visualized in clinical CBCT images of human subjects. Simulated contrast-enhanced CBCT was found to improve tumor contrast in all subjects. Different patients were found to require different contrast injections to maximize tumor contrast. Conclusions: Based on the authors animal study, respiration managed contrast enhanced CBCT improves IGRT significantly. Contrast enhanced CBCT benefits from patient specific tracer kinetics determined from DCE-CT.

  6. MRI contrast agents and high-throughput screening by MRI

    DOE Patents [OSTI]

    Lu, Yi; Yigit, Mehmet Veysel; Mazumdar, Debapriya

    2013-10-29

    The present invention provides an MRI contrast agent, comprising: MRI contrast agent particles, and oligonucleotides, attached to the particles.

  7. An Assessment of Visual Testing

    SciTech Connect (OSTI)

    Cumblidge, Stephen E.; Anderson, Michael T.; Doctor, Steven R.

    2004-11-01

    In response to increasing interest from nuclear utilities in replacing some volumetric examinations of nuclear reactor components with remote visual testing, the Pacific Northwest National Laboratory has examined the capabilities of remote visual testing for the Nuclear Regulatory Commission. This report describes visual testing and explores the visual acuities of the camera systems used to examine nuclear reactor components. The types and sizes of cracks typically found in nuclear reactor components are reviewed. The current standards in visual testing are examined critically, and several suggestions for improving these standards are proposed. Also proposed for future work is a round robin test to determine the effectiveness of visual tests and experimental studies to determine the values for magnification and resolution needed to reliably image very tight cracks.

  8. Scientific Visualization, Seeing the Unseeable

    ScienceCinema (OSTI)

    LBNL

    2009-09-01

    June 24, 2008 Berkeley Lab lecture: Scientific visualization transforms abstract data into readily comprehensible images, provide a vehicle for "seeing the unseeable," and play a central role in bo... June 24, 2008 Berkeley Lab lecture: Scientific visualization transforms abstract data into readily comprehensible images, provide a vehicle for "seeing the unseeable," and play a central role in both experimental and computational sciences. Wes Bethel, who heads the Scientific Visualization Group in the Computational Research Division, presents an overview of visualization and computer graphics, current research challenges, and future directions for the field.

  9. Phase contrast portal imaging using synchrotron radiation

    SciTech Connect (OSTI)

    Umetani, K.; Kondoh, T.

    2014-07-15

    Microbeam radiation therapy is an experimental form of radiation treatment with great potential to improve the treatment of many types of cancer. We applied a synchrotron radiation phase contrast technique to portal imaging to improve targeting accuracy for microbeam radiation therapy in experiments using small animals. An X-ray imaging detector was installed 6.0 m downstream from an object to produce a high-contrast edge enhancement effect in propagation-based phase contrast imaging. Images of a mouse head sample were obtained using therapeutic white synchrotron radiation with a mean beam energy of 130 keV. Compared to conventional portal images, remarkably clear images of bones surrounding the cerebrum were acquired in an air environment for positioning brain lesions with respect to the skull structure without confusion with overlapping surface structures.

  10. Data visualization methods, data visualization devices, data visualization apparatuses, and articles of manufacture

    DOE Patents [OSTI]

    Turner, Alan E.; Crow, Vernon L.; Payne, Deborah A.; Hetzler, Elizabeth G.; Cook, Kristin A.; Cowley, Wendy E.

    2015-06-30

    Data visualization methods, data visualization devices, data visualization apparatuses, and articles of manufacture are described according to some aspects. In one aspect, a data visualization method includes accessing a plurality of initial documents at a first moment in time, first processing the initial documents providing processed initial documents, first identifying a plurality of first associations of the initial documents using the processed initial documents, generating a first visualization depicting the first associations, accessing a plurality of additional documents at a second moment in time after the first moment in time, second processing the additional documents providing processed additional documents, second identifying a plurality of second associations of the additional documents and at least some of the initial documents, wherein the second identifying comprises identifying using the processed initial documents and the processed additional documents, and generating a second visualization depicting the second associations.

  11. Exogenous contrast agents for thermoacoustic imaging: An investigation into the underlying sources of contrast

    SciTech Connect (OSTI)

    Ogunlade, Olumide Beard, Paul

    2015-01-15

    Purpose: Thermoacoustic imaging at microwave excitation frequencies is limited by the low differential contrast exhibited by high water content tissues. To overcome this, exogenous thermoacoustic contrast agents based on gadolinium compounds, iron oxide, and single wall carbon nanotubes have previously been suggested and investigated. However, these previous studies did not fully characterize the electric, magnetic, and thermodynamic properties of these agents thus precluding identification of the underlying sources of contrast. To address this, measurements of the complex permittivity, complex permeability, DC conductivity, and Grüneisen parameter have been made. These measurements allowed the origins of the contrast provided by each substance to be identified. Methods: The electric and magnetic properties of the contrast agents were characterized at 3 GHz using two rectangular waveguide cavities. The DC conductivity was measured separately using a conductivity meter. Thermoacoustic signals were then acquired and compared to those generated in water. Finally, 3D electromagnetic simulations were used to decouple the different contributions to the absorbed power density. Results: It was found that the gadolinium compounds provided appreciable electric contrast but not originating from the gadolinium itself. The contrast was either due to dissociation of the gadolinium salt which increased ionic conductivity or its nondissociated polar fraction which increased dielectric polarization loss or a combination of both. In addition, very high concentrations were required to achieve appreciable contrast, to the extent that the Grüneisen parameter increased significantly and became a source of contrast. Iron oxide particles were found to produce low but measurable dielectric contrast due to dielectric polarization loss, but this is attributed to the coating of the particles not the iron oxide. Single wall carbon nanotubes did not provide measurable contrast of any type

  12. Visualization Contest Applications due August 3

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Visualization Contest Applications due August 3 Visualization Contest Applications due August 3 June 22, 2012 by Francesca Verdier In support of the IEEE Symposium on Large-Scale Data Analysis and Visualization (LDAV) 2012's visualization contest, LDAV organizers are offering compute time to participants through a NERSC allocation awarded by ASCR. The LDAV Visualization Contest focuses on the area of visualization of extremely large datasets. The goal is to devise a visualization or a

  13. Mirror: Visually reflecting C{sup ++}

    SciTech Connect (OSTI)

    Orosco, R.; Campo, M.; Sole, J.P.

    1995-12-31

    Reflection is the ability of a system to inspect and change a model of itself. This ability allows to transparently control and extend the functionality of an existing system without performing any changes to the system itself. In dynamic object-oriented languages like CLOS or Smalltalk. the reflective ability is supported directly by the language. In C++, in contrast, reflection must be provided by some form of code annotation and pre-processing. In most cases, this approach either requires modification of the system code, or just supports the reflection of entire classes but not the reflection of determined objects. This work presents the Mirror environment that supports C++ reflective programming through visual association of meta-classes to classes. It allows full transparent reflection of objects using three-dimensional presentations of the different architecture levels. The environment adds reflective ability to C++ classes without any code modification visible to the user, as well as dynamically selective reflection of objects.

  14. Phased Contrast X-Ray Imaging

    ScienceCinema (OSTI)

    Erin Miller

    2012-12-31

    The Pacific Northwest National Laboratory is developing a range of technologies to broaden the field of explosives detection. Phased contrast X-ray imaging, which uses silicon gratings to detect distortions in the X-ray wave front, may be applicable to mail or luggage scanning for explosives; it can also be used in detecting other contraband, small-parts inspection, or materials characterization.

  15. Embedded high-contrast distributed grating structures

    DOE Patents [OSTI]

    Zubrzycki, Walter J.; Vawter, Gregory A.; Allerman, Andrew A.

    2002-01-01

    A new class of fabrication methods for embedded distributed grating structures is claimed, together with optical devices which include such structures. These new methods are the only known approach to making defect-free high-dielectric contrast grating structures, which are smaller and more efficient than are conventional grating structures.

  16. Contrast-to-noise ratio optimization for a prototype phase-contrast computed tomography scanner

    SciTech Connect (OSTI)

    Müller, Mark Yaroshenko, Andre; Velroyen, Astrid; Tapfer, Arne; Bech, Martin; Pauwels, Bart; Bruyndonckx, Peter; Sasov, Alexander; Pfeiffer, Franz

    2015-12-15

    In the field of biomedical X-ray imaging, novel techniques, such as phase-contrast and dark-field imaging, have the potential to enhance the contrast and provide complementary structural information about a specimen. In this paper, a first prototype of a preclinical X-ray phase-contrast CT scanner based on a Talbot-Lau interferometer is characterized. We present a study of the contrast-to-noise ratios for attenuation and phase-contrast images acquired with the prototype scanner. The shown results are based on a series of projection images and tomographic data sets of a plastic phantom in phase and attenuation-contrast recorded with varying acquisition settings. Subsequently, the signal and noise distribution of different regions in the phantom were determined. We present a novel method for estimation of contrast-to-noise ratios for projection images based on the cylindrical geometry of the phantom. Analytical functions, representing the expected signal in phase and attenuation-contrast for a circular object, are fitted to individual line profiles of the projection data. The free parameter of the fit function is used to estimate the contrast and the goodness of the fit is determined to assess the noise in the respective signal. The results depict the dependence of the contrast-to-noise ratios on the applied source voltages, the number of steps of the phase stepping routine, and the exposure times for an individual step. Moreover, the influence of the number of projection angles on the image quality of CT slices is investigated. Finally, the implications for future imaging purposes with the scanner are discussed.

  17. Visual Sample Plan

    Energy Science and Technology Software Center (OSTI)

    2007-10-25

    VSP selects the appropriate number and location of environmental samples to ensure that the results of statistical tests performed to provide input to risk decisions have the required confidence and performance. VSP Version 5.0 provides sample-size equations or algorithms needed by specific statistical tests appropriate for specific environmental sampling objectives. It also provides data quality assessment and statistical analysis functions to support evaluation of the data and determine whether the data support decisions regarding sitesmore » suspected of contamination. The easy-to-use program is highly visual and graphic. VSP runs on personal computers with Microsoft Windows operating systems (98, NT, 2000, Millennium Edition, CE, and XP) Designed primarily for project managers and users without expertise in statistics, VSP is applicable to two- and three-dimensional populations to be sampled (e.g., rooms and buildings, surface soil, a defined layer of subsurface soil, water bodies, and other similar applications) for studies of environmental quality. VSP is also applicable for designing sampling plans for assessing chem./rad/bio threat and hazard identification within rooms and buildings, and for designing geophysical surveys for UXO identification.« less

  18. Phase contrast in high resolution electron microscopy

    DOE Patents [OSTI]

    Rose, H.H.

    1975-09-23

    This patent relates to a device for developing a phase contrast signal for a scanning transmission electron microscope. The lens system of the microscope is operated in a condition of defocus so that predictable alternate concentric regions of high and low electron density exist in the cone of illumination. Two phase detectors are placed beneath the object inside the cone of illumination, with the first detector having the form of a zone plate, each of its rings covering alternate regions of either higher or lower electron density. The second detector is so configured that it covers the regions of electron density not covered by the first detector. Each detector measures the number of electrons incident thereon and the signal developed by the first detector is subtracted from the signal developed by the record detector to provide a phase contrast signal. (auth)

  19. Collaboration Topics - Visualization | National Nuclear Security

    National Nuclear Security Administration (NNSA)

    Administration | (NNSA) Visualization This collaboration area focuses on visualization and data analysis and centers on the open source development of the Visualization Toolkit (VTK), which forms the basis of our customized visualization and analysis tools (ParaView, VisIt and LOVE). We are partnering on common VTK needs and working on methods for visualizing and analyzing data on advanced architectures that are memory and I/O constrained. Accomplishments 1) Portions of the CEA visualization

  20. Contrasting behavior of intermediate-range order structures in...

    Office of Scientific and Technical Information (OSTI)

    Journal Article: Contrasting behavior of intermediate-range order structures in jadeite glass and melt Citation Details In-Document Search Title: Contrasting behavior of ...

  1. Laser speckle contrast imaging of skin blood perfusion responses...

    Office of Scientific and Technical Information (OSTI)

    Laser speckle contrast imaging of skin blood perfusion responses induced by laser coagulation Citation Details In-Document Search Title: Laser speckle contrast imaging of skin ...

  2. NREL: Energy Systems Integration Facility - Visualization of...

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Visualization of Electric Power System Information Workshop The Energy Systems Integration Facility workshop, Visualization of Electric Power System Information, was held September...

  3. Visual Design Group | The Ames Laboratory

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Visual Design Group Ames Laboratory Logos You are here Home Visual Design Group Graphics Services supports the design, printing and production needs of the Ames Laboratory. For...

  4. Visualization Gallery from the Computational Research Division...

    Office of Scientific and Technical Information (OSTI)

    Visualization Gallery from the Computational Research Division at Lawrence Berkeley ... Data from Enhanced Geothermal Systems; 3) PointCloudXplore: Visualization and ...

  5. Visualizing Individual Carbon Nanotubes with Optical Microscopy...

    Office of Scientific and Technical Information (OSTI)

    Published Article: Visualizing Individual Carbon Nanotubes with Optical Microscopy Title: Visualizing Individual Carbon Nanotubes with Optical Microscopy Authors: Novak, Michael A. ...

  6. Visualization of Bacterial Microcompartment Facet Assembly Using...

    Office of Scientific and Technical Information (OSTI)

    Visualization of Bacterial Microcompartment Facet Assembly Using High-Speed Atomic Force Microscopy Prev Next Title: Visualization of Bacterial Microcompartment Facet ...

  7. Visual Design Group | The Ames Laboratory

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Visual Design Group alternative text alternative text alternative text alternative text alternative text alternative text alternative text alternative text The Visual Design Group ...

  8. Visualization Gallery from the Computational Research Division...

    Office of Scientific and Technical Information (OSTI)

    Particle Acceleration Data; 2) Visualization of Microearthquake Data from Enhanced Geothermal Systems; 3) PointCloudXplore: Visualization and Analysis of 3D Gene Expression Data; ...

  9. Ocean Thermal Extractable Energy Visualization: Final Technical...

    Office of Environmental Management (EM)

    Ocean Thermal Extractable Energy Visualization: Final Technical Report Ocean Thermal Extractable Energy Visualization: Final Technical Report Report about the Ocean Thermal ...

  10. Dynamic visualization of data streams

    DOE Patents [OSTI]

    Wong, Pak Chung; Foote, Harlan P.; Adams, Daniel R.; Cowley, Wendy E.; Thomas, James J.

    2009-07-07

    One embodiment of the present invention includes a data communication subsystem to receive a data stream, and a data processing subsystem responsive to the data communication subsystem to generate a visualization output based on a group of data vectors corresponding to a first portion of the data stream. The processing subsystem is further responsive to a change in rate of receipt of the data to modify the visualization output with one or more other data vectors corresponding to a second portion of the data stream as a function of eigenspace defined with the group of data vectors. The system further includes a display device responsive to the visualization output to provide a corresponding visualization.

  11. Data mining and visualization techniques

    DOE Patents [OSTI]

    Wong, Pak Chung; Whitney, Paul; Thomas, Jim

    2004-03-23

    Disclosed are association rule identification and visualization methods, systems, and apparatus. An association rule in data mining is an implication of the form X.fwdarw.Y where X is a set of antecedent items and Y is the consequent item. A unique visualization technique that provides multiple antecedent, consequent, confidence, and support information is disclosed to facilitate better presentation of large quantities of complex association rules.

  12. Photoacoustic phasoscopy super-contrast imaging

    SciTech Connect (OSTI)

    Gao, Fei; Feng, Xiaohua; Zheng, Yuanjin

    2014-05-26

    Phasoscopy is a recently proposed concept correlating electromagnetic (EM) absorption and scattering properties based on energy conservation. Phase information can be extracted from EM absorption induced acoustic wave and scattered EM wave for biological tissue characterization. In this paper, an imaging modality, termed photoacoustic phasoscopy imaging (PAPS), is proposed and verified experimentally based on phasoscopy concept with laser illumination. Both endogenous photoacoustic wave and scattered photons are collected simultaneously to extract the phase information. The PAPS images are then reconstructed on vessel-mimicking phantom and ex vivo porcine tissues to show significantly improved contrast than conventional photoacoustic imaging.

  13. Computing and Visualizing Reachable Volumes for Maneuvering Satellites

    SciTech Connect (OSTI)

    Jiang, M; de Vries, W H; Pertica, A J; Olivier, S S

    2011-09-11

    Detecting and predicting maneuvering satellites is an important problem for Space Situational Awareness. The spatial envelope of all possible locations within reach of such a maneuvering satellite is known as the Reachable Volume (RV). As soon as custody of a satellite is lost, calculating the RV and its subsequent time evolution is a critical component in the rapid recovery of the satellite. In this paper, we present a Monte Carlo approach to computing the RV for a given object. Essentially, our approach samples all possible trajectories by randomizing thrust-vectors, thrust magnitudes and time of burn. At any given instance, the distribution of the 'point-cloud' of the virtual particles defines the RV. For short orbital time-scales, the temporal evolution of the point-cloud can result in complex, multi-reentrant manifolds. Visualization plays an important role in gaining insight and understanding into this complex and evolving manifold. In the second part of this paper, we focus on how to effectively visualize the large number of virtual trajectories and the computed RV. We present a real-time out-of-core rendering technique for visualizing the large number of virtual trajectories. We also examine different techniques for visualizing the computed volume of probability density distribution, including volume slicing, convex hull and isosurfacing. We compare and contrast these techniques in terms of computational cost and visualization effectiveness, and describe the main implementation issues encountered during our development process. Finally, we will present some of the results from our end-to-end system for computing and visualizing RVs using examples of maneuvering satellites.

  14. Data sonification and sound visualization.

    SciTech Connect (OSTI)

    Kaper, H. G.; Tipei, S.; Wiebel, E.; Mathematics and Computer Science; Univ. of Illinois

    1999-07-01

    Sound can help us explore and analyze complex data sets in scientific computing. The authors describe a digital instrument for additive sound synthesis (Diass) and a program to visualize sounds in a virtual reality environment (M4Cave). Both are part of a comprehensive music composition environment that includes additional software for computer-assisted composition and automatic music notation.

  15. VCAT: Visual Crosswalk Analysis Tool

    SciTech Connect (OSTI)

    Cleland, Timothy J.; Forslund, David W.; Cleland, Catherine A.

    2012-08-31

    VCAT is a knowledge modeling and analysis tool. It was synthesized from ideas in functional analysis, business process modeling, and complex network science. VCAT discovers synergies by analyzing natural language descriptions. Specifically, it creates visual analytic perspectives that capture intended organization structures, then overlays the serendipitous relationships that point to potential synergies within an organization or across multiple organizations.

  16. Absorption and Phase Contrast X-Ray Imaging in Paleontology Using Laboratory and Synchrotron Sources

    SciTech Connect (OSTI)

    Bidola, Pidassa; Stockmar, Marco; Achterhold, Klaus; Pfeiffer, Franz; Pacheco, Mirian L.A.F.; Soriano, Carmen; Beckmann, Felix; Herzen, Julia

    2015-10-01

    X-ray micro-computed tomography (CT) is commonly used for imaging of samples in biomedical or materials science research. Owing to the ability to visualize a sample in a nondestructive way, X-ray CT is perfectly suited to inspect fossilized specimens, which are mostly unique or rare. In certain regions of the world where important sedimentation events occurred in the Precambrian geological time, several fossilized animals are studied to understand questions related to their origin, environment, and life evolution. This article demonstrates the advantages of applying absorption and phase-contrast CT on the enigmatic fossil Corumbella werneri, one of the oldest known animals capable of building hard parts, originally discovered in Corumba (Brazil). Different tomographic setups were tested to visualize the fossilized inner structures: a commercial laboratory-based CT device, two synchrotron-based imaging setups using conventional absorption and propagation-based phase contrast, and a commercial X-ray microscope with a lens-coupled detector system, dedicated for radiography and tomography. Based on our results we discuss the strengths and weaknesses of the different imaging setups for paleontological studies.

  17. Energy Integration Visualization Room (Fact Sheet)

    SciTech Connect (OSTI)

    Not Available

    2012-08-01

    This two-page fact sheet describes the new Energy Integration Visualization Room in the ESIF and talks about some of the capabilities and unique visualization features of the the room.

  18. Visualization Graph | OpenEI Community

    Open Energy Info (EERE)

    8 August, 2012 - 12:37 New Gapminder Visualizations Added EIA Energy data Gapminder OECD OpenEI SEDS Visualization Graph OpenEI now features some cool new Gapminder...

  19. Visualization Contest Applications due August 3

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Contest Applications due August 3 June 22, 2012 by Francesca Verdier In support of the IEEE Symposium on Large-Scale Data Analysis and Visualization (LDAV) 2012's visualization...

  20. Research Challenges for Visualization Software. (Journal Article...

    Office of Scientific and Technical Information (OSTI)

    Research Challenges for Visualization Software. Citation ... IEEE Computer Magazine. Research Org: Sandia National Laboratories Sponsoring Org: USDOE National Nuclear Security ...

  1. Visual Patent Search - Energy Innovation Portal

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Visual Patent Search Site Map Printable Version Share this resource About Search Categories (15) Advanced Materials Biomass and Biofuels Building Energy Efficiency Electricity Transmission Energy Analysis Energy Storage Geothermal Hydrogen and Fuel Cell Hydropower, Wave and Tidal Industrial Technologies Solar Photovoltaic Solar Thermal Startup America Vehicles and Fuels Wind Energy Partners (27) Visual Patent Search Success Stories Visual Patent Search Read the Energy.gov Article Visual Patent

  2. Visualization Clusters | Argonne Leadership Computing Facility

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Analytics and Visualization Visualization Cluster Cooley The primary purpose of Cooley is to analyze and visualize data produced on Mira. Equipped with state-of-the-art graphics processing units (GPUs), Cooley converts computational data from Mira into high-resolution visual representations. The resulting images, videos, and animations help users to better analyze and understand the data generated by Mira. Cooley can also be used for statistical analysis, helping to pinpoint trends in the

  3. An interpersonal multimedia visualization system

    SciTech Connect (OSTI)

    Phillips, R.L.

    1990-01-01

    Media View is a computer program that provides a generic infrastructure for authoring and interacting with multimedia documents. Among its many applications is the ability to furnish a user with a comprehensive environment for analysis and visualization. With MediaView the user produces a document'' that contains mathematics, datasets and associated visualizations. From the dataset or embedded mathematics animated sequences can be produced in situ. The mathematical content of the document'' can be explored through manipulation with Mathematica {trademark}. Since the document'' is all digital, it can be shared with a co-worker on a local network or mailed electronically to a colleague at a distant site. Animations and any other substructure of the document'' persist through the mailing process and can be awakened at the destination by the recipient. 5 refs., 4 figs.

  4. Apparatus for separating particles utilizing engineered acoustic contrast capture particles

    DOE Patents [OSTI]

    Kaduchak, Gregory; Ward, Michael D

    2016-05-17

    An apparatus for separating particles from a medium includes a capillary defining a flow path therein that is in fluid communication with a medium source. The medium source includes engineered acoustic contrast capture particle having a predetermined acoustic contrast. The apparatus includes a vibration generator that is operable to produce at least one acoustic field within the flow path. The acoustic field produces a force potential minima for positive acoustic contrast particles and a force potential minima for negative acoustic contrast particles in the flow path and drives the engineered acoustic contrast capture particles to either the force potential minima for positive acoustic contrast particles or the force potential minima for negative acoustic contrast particles.

  5. Apparatus for separating particles utilizing engineered acoustic contrast capture particles

    DOE Patents [OSTI]

    Kaduchak, Gregory; Ward, Michael D.

    2011-12-27

    An apparatus for separating particles from a medium includes a capillary defining a flow path therein that is in fluid communication with a medium source. The medium source includes engineered acoustic contrast capture particle having a predetermined acoustic contrast. The apparatus includes a vibration generator that is operable to produce at least one acoustic field within the flow path. The acoustic field produces a force potential minima for positive acoustic contrast particles and a force potential minima for negative acoustic contrast particles in the flow path and drives the engineered acoustic contrast capture particles to either the force potential minima for positive acoustic contrast particles or the force potential minima for negative acoustic contrast particles.

  6. Apparatus for separating particles utilizing engineered acoustic contrast capture particles

    DOE Patents [OSTI]

    Kaduchak, Gregory; Ward, Michael D

    2014-10-21

    An apparatus for separating particles from a medium includes a capillary defining a flow path therein that is in fluid communication with a medium source. The medium source includes engineered acoustic contrast capture particle having a predetermined acoustic contrast. The apparatus includes a vibration generator that is operable to produce at least one acoustic field within the flow path. The acoustic field produces a force potential minima for positive acoustic contrast particles and a force potential minima for negative acoustic contrast particles in the flow path and drives the engineered acoustic contrast capture particles to either the force potential minima for positive acoustic contrast particles or the force potential minima for negative acoustic contrast particles.

  7. Visualizing Cyber Security: Usable Workspaces

    SciTech Connect (OSTI)

    Fink, Glenn A.; North, Christopher L.; Endert, Alexander; Rose, Stuart J.

    2009-10-11

    An environment that supports cyber analytics work should enable multiple, simultaneous investigations, information foraging, and provide a solution space for organizing data. We describe our study of cyber security professionals and visualizations in a large, high-resolution display work environment. We discuss the tasks and needs of analysts that such an environment can support and present several prototypes designed to support these needs. We conclude with a usability evaluation of the prototypes and additional lessons learned.

  8. MemAxes Visualization Software

    Energy Science and Technology Software Center (OSTI)

    2014-08-28

    Hardware advancements such as Intel's PEBS and AMD's IBS, as well as software developments such as the perf_event API in Linux have made available the acquisition of memory access samples with performance information. MemAxes is a visualization and analysis tool for memory access sample data. By mapping the samples to their associated code, variables, node topology, and application dataset, MemAxes provides intuitive views of the data.

  9. Cognitive Foundations for Visual Analytics

    SciTech Connect (OSTI)

    Greitzer, Frank L.; Noonan, Christine F.; Franklin, Lyndsey

    2011-02-25

    In this report, we provide an overview of scientific/technical literature on information visualization and VA. Topics discussed include an update and overview of the extensive literature search conducted for this study, the nature and purpose of the field, major research thrusts, and scientific foundations. We review methodologies for evaluating and measuring the impact of VA technologies as well as taxonomies that have been proposed for various purposes to support the VA community. A cognitive science perspective underlies each of these discussions.

  10. Visual Interface for Materials Simulations

    Energy Science and Technology Software Center (OSTI)

    2004-08-01

    VIMES (Visual Inteface for Materials Simulations) is a graphical user interface (GUI) for pre- and post-processing alomistic materials science calculations. The code includes tools for building and visualizing simple crystals, supercells, and surfaces, as well as tools for managing and modifying the input to Sandia materials simulations codes such as Quest (Peter Schultz, SNL 9235) and Towhee (Marcus Martin, SNL 9235). It is often useful to have a graphical interlace to construct input for materialsmore » simulations codes and to analyze the output of these programs. VIMES has been designed not only to build and visualize different materials systems, but also to allow several Sandia codes to be easier to use and analyze. Furthermore. VIMES has been designed to be reasonably easy to extend to new materials programs. We anticipate that users of Sandia materials simulations codes will use VIMCS to simplify the submission and analysis of these simulations. VIMES uses standard OpenGL graphics (as implemented in the Python programming language) to display the molecules. The algorithms used to rotate, zoom, and pan molecules are all standard applications using the OpenGL libraries. VIMES uses the Marching Cubes algorithm for isosurfacing 3D data such as molecular orbitals or electron densities around the molecules.« less

  11. Visual Interface for Materials Simulations

    SciTech Connect (OSTI)

    2004-08-01

    VIMES (Visual Inteface for Materials Simulations) is a graphical user interface (GUI) for pre- and post-processing alomistic materials science calculations. The code includes tools for building and visualizing simple crystals, supercells, and surfaces, as well as tools for managing and modifying the input to Sandia materials simulations codes such as Quest (Peter Schultz, SNL 9235) and Towhee (Marcus Martin, SNL 9235). It is often useful to have a graphical interlace to construct input for materials simulations codes and to analyze the output of these programs. VIMES has been designed not only to build and visualize different materials systems, but also to allow several Sandia codes to be easier to use and analyze. Furthermore. VIMES has been designed to be reasonably easy to extend to new materials programs. We anticipate that users of Sandia materials simulations codes will use VIMCS to simplify the submission and analysis of these simulations. VIMES uses standard OpenGL graphics (as implemented in the Python programming language) to display the molecules. The algorithms used to rotate, zoom, and pan molecules are all standard applications using the OpenGL libraries. VIMES uses the Marching Cubes algorithm for isosurfacing 3D data such as molecular orbitals or electron densities around the molecules.

  12. Visualization

    Office of Scientific and Technical Information (OSTI)

    ... as a search through a large tree of possible solutions. ... Guided by the energy function, it quickly creates a variety ... new functions to the source code and user interface simple. ...

  13. Visualization Tools for Adaptive Mesh Refinement Data

    SciTech Connect (OSTI)

    Weber, Gunther H.; Beckner, Vincent E.; Childs, Hank; Ligocki,Terry J.; Miller, Mark C.; Van Straalen, Brian; Bethel, E. Wes

    2007-05-09

    Adaptive Mesh Refinement (AMR) is a highly effective method for simulations that span a large range of spatiotemporal scales, such as astrophysical simulations that must accommodate ranges from interstellar to sub-planetary. Most mainstream visualization tools still lack support for AMR as a first class data type and AMR code teams use custom built applications for AMR visualization. The Department of Energy's (DOE's) Science Discovery through Advanced Computing (SciDAC) Visualization and Analytics Center for Enabling Technologies (VACET) is currently working on extending VisIt, which is an open source visualization tool that accommodates AMR as a first-class data type. These efforts will bridge the gap between general-purpose visualization applications and highly specialized AMR visual analysis applications. Here, we give an overview of the state of the art in AMR visualization research and tools and describe how VisIt currently handles AMR data.

  14. Visualization of Scalar Adaptive Mesh Refinement Data

    SciTech Connect (OSTI)

    VACET; Weber, Gunther; Weber, Gunther H.; Beckner, Vince E.; Childs, Hank; Ligocki, Terry J.; Miller, Mark C.; Van Straalen, Brian; Bethel, E. Wes

    2007-12-06

    Adaptive Mesh Refinement (AMR) is a highly effective computation method for simulations that span a large range of spatiotemporal scales, such as astrophysical simulations, which must accommodate ranges from interstellar to sub-planetary. Most mainstream visualization tools still lack support for AMR grids as a first class data type and AMR code teams use custom built applications for AMR visualization. The Department of Energy's (DOE's) Science Discovery through Advanced Computing (SciDAC) Visualization and Analytics Center for Enabling Technologies (VACET) is currently working on extending VisIt, which is an open source visualization tool that accommodates AMR as a first-class data type. These efforts will bridge the gap between general-purpose visualization applications and highly specialized AMR visual analysis applications. Here, we give an overview of the state of the art in AMR scalar data visualization research.

  15. Localized surface plasmon assisted contrast microscopy for ultrathin transparent specimens

    SciTech Connect (OSTI)

    Wei, Feifei; Lu, Dylan; Aguinaldo, Ryan; Ma, Yicong; Sinha, Sunil K.; Liu, Zhaowei

    2014-10-20

    We demonstrate a high contrast imaging technique, termed localized surface plasmon assisted contrast microscopy, by combining localized surface plasmon resonances (LSPR) and dark-field microscopy technique. Due to the sensitive response of LSPR to the refractive index of the surrounding media, this technique is capable of converting a small refractive index difference to a change in scattering intensity, resulting in a high-contrast, diffraction limited image of a thin unstained specimen with small, gradual refractive-index variation.

  16. Visualizing Twenty Years of Applications

    SciTech Connect (OSTI)

    Potel, Mike; Wong, Pak C.

    2014-11-01

    This issue of IEEE Computer Graphics and Applications marks the 20th anniversary of the Applications department as a regular feature of the magazine. We thought it might be interesting to look back at the 20 years of Applications department articles to assess its evolution over that time. By aggregating all twenty years of articles and applying a little statistical and visual analytics, we’ve uncovered some interesting characteristics and trends we thought we’d share to mark this 20 year milestone.

  17. Visual Analysis of Weblog Content

    SciTech Connect (OSTI)

    McColgin, David W.; Cramer, Nicholas O.; Gregory, Michelle L.; Payne, Deborah A.; Love, Douglas V.

    2007-03-26

    ABSTRACT In this demo we present an analytic tool that provides a comprehensive approach to weblog analysis. We have combined ingest tools that have been designed to work with the special characteristics of blog data with a mature visual analytic tool designed for in-depth document analysis. Using a subset of the Buzz Metrics data, we demonstrate how this combination of tools provides users with the capability to analyze blogs in multiple languages, investigate changes over time, and investigate the affect of blogs.

  18. Visual Analysis of Weblog Content

    SciTech Connect (OSTI)

    Gregory, Michelle L.; Payne, Deborah A.; McColgin, Dave; Cramer, Nick O.; Love, Douglas V.

    2007-03-26

    In recent years, one of the advances of the World Wide Web is social media and one of the fastest growing aspects of social media is the blogosphere. Blogs make content creation easy and are highly accessible through web pages and syndication. With their growing influence, a need has arisen to be able to monitor the opinions and insight revealed within their content. In this paper we describe a technical approach for analyzing the content of blog data using a visual analytic tool, IN-SPIRE, developed by Pacific Northwest National Laboratory. We highlight the capabilities of this tool that are particularly useful for information gathering from blog data.

  19. Visual-servoing optical microscopy

    DOE Patents [OSTI]

    Callahan, Daniel E.; Parvin, Bahram

    2011-05-24

    The present invention provides methods and devices for the knowledge-based discovery and optimization of differences between cell types. In particular, the present invention provides visual servoing optical microscopy, as well as analysis methods. The present invention provides means for the close monitoring of hundreds of individual, living cells over time; quantification of dynamic physiological responses in multiple channels; real-time digital image segmentation and analysis; intelligent, repetitive computer-applied cell stress and cell stimulation; and the ability to return to the same field of cells for long-term studies and observation. The present invention further provides means to optimize culture conditions for specific subpopulations of cells.

  20. Visual-servoing optical microscopy

    DOE Patents [OSTI]

    Callahan, Daniel E; Parvin, Bahram

    2013-10-01

    The present invention provides methods and devices for the knowledge-based discovery and optimization of differences between cell types. In particular, the present invention provides visual servoing optical microscopy, as well as analysis methods. The present invention provides means for the close monitoring of hundreds of individual, living cells over time; quantification of dynamic physiological responses in multiple channels; real-time digital image segmentation and analysis; intelligent, repetitive computer-applied cell stress and cell stimulation; and the ability to return to the same field of cells for long-term studies and observation. The present invention further provides means to optimize culture conditions for specific subpopulations of cells.

  1. Ocean Thermal Extractable Energy Visualization

    SciTech Connect (OSTI)

    Ascari, Matthew

    2012-10-28

    The Ocean Thermal Extractable Energy Visualization (OTEEV) project focuses on assessing the Maximum Practicably Extractable Energy (MPEE) from the world’s ocean thermal resources. MPEE is defined as being sustainable and technically feasible, given today’s state-of-the-art ocean energy technology. Under this project the OTEEV team developed a comprehensive Geospatial Information System (GIS) dataset and software tool, and used the tool to provide a meaningful assessment of MPEE from the global and domestic U.S. ocean thermal resources.

  2. Visual-servoing optical microscopy

    DOE Patents [OSTI]

    Callahan, Daniel E.; Parvin, Bahram

    2009-06-09

    The present invention provides methods and devices for the knowledge-based discovery and optimization of differences between cell types. In particular, the present invention provides visual servoing optical microscopy, as well as analysis methods. The present invention provides means for the close monitoring of hundreds of individual, living cells over time: quantification of dynamic physiological responses in multiple channels; real-time digital image segmentation and analysis; intelligent, repetitive computer-applied cell stress and cell stimulation; and the ability to return to the same field of cells for long-term studies and observation. The present invention further provides means to optimize culture conditions for specific subpopulations of cells.

  3. Contrasting Behavior of Carbon Nucleation in the Initial Stages...

    Office of Scientific and Technical Information (OSTI)

    of Graphene Epitaxial Growth on Stepped Metal Surfaces Citation Details In-Document Search Title: Contrasting Behavior of Carbon Nucleation in the Initial Stages of Graphene ...

  4. Visualizing Electric Vehicle Sales | Department of Energy

    Office of Energy Efficiency and Renewable Energy (EERE) Indexed Site

    Visualizing Electric Vehicle Sales Visualizing Electric Vehicle Sales July 25, 2013 - 2:48pm Addthis Data compiled by Yan (Joann) Zhou at Argonne National Laboratory. (*) Sales from the second quarter of 2013 for Tesla Model S are based off of estimates provided by the Hybrid Market Dashboard. Data updated 1/20/15. Daniel Wood Daniel Wood Data Visualization and Cartographic Specialist, Office of Public Affairs More on eGallon: Read more about electric vehicle sales and eGallon's continued

  5. Video-Visuals | Department of Energy

    Office of Energy Efficiency and Renewable Energy (EERE) Indexed Site

    Video-Visuals Video-Visuals See how we can generate clean, renewable energy from hot water sources deep beneath the Earth's surface. The video highlights the basic principles at work in geothermal energy production, and illustrates three different ways the Earth's heat can be converted into electricity. Multimedia resources at the United States Department of Energy help to message geothermal development visually through video, photographs, renderings of the subsurface, and resource maps. Video /

  6. Mini-review of Electron Density Visualization

    SciTech Connect (OSTI)

    Adler, Joan; Adler, Omri; Kreif, Meytal; Cohen, Or; Grosso, Bastien; Hashibon, Adham; Cooper, Valentino R

    2015-01-01

    We describe both educational and research oriented examples of electronic density visualization with AViz. Several detailed cases are presented and the procedures for their preparation are described.

  7. Collaboration Topics - Visualization | National Nuclear Security...

    National Nuclear Security Administration (NNSA)

    This collaboration area focuses on visualization and data analysis and centers on the open ... and analyzing data on advanced architectures that are memory and IO constrained. ...

  8. Magnetic field induced differential neutron phase contrast imaging

    SciTech Connect (OSTI)

    Strobl, M.; Treimer, W.; Walter, P.; Keil, S.; Manke, I.

    2007-12-17

    Besides the attenuation of a neutron beam penetrating an object, induced phase changes have been utilized to provide contrast in neutron and x-ray imaging. In analogy to differential phase contrast imaging of bulk samples, the refraction of neutrons by magnetic fields yields image contrast. Here, it will be reported how double crystal setups can provide quantitative tomographic images of magnetic fields. The use of magnetic air prisms adequate to split the neutron spin states enables a distinction of field induced phase shifts and these introduced by interaction with matter.

  9. Poster Thur Eve 16: 4DCT simulation with synchronized contrast injection of liver SBRT patients

    SciTech Connect (OSTI)

    Karotki, A.; Korol, R.; Milot, L.; Chu, W.; Chung, H. T.; Erler, D.

    2014-08-15

    Stereotactic body radiation therapy (SBRT) has recently emerged as a valid option for treating liver metastases. SBRT delivers highly conformai dose over a small number of fractions. As such it is particularly sensitive to the accuracy of target volume delineation by the radiation oncologist. However, contouring liver metastases remains challenging for the following reasons. First, the liver usually undergoes significant motion due to respiration. Second, liver metastases are often nearly indistinguishable from the surrounding tissue when using computed tomography (CT) for imaging making it difficult to identify and delineate them. Both problems can be overcome by using four dimensional CT (4DCT) synchronized with intravenous contrast injection. We describe a novel CT simulation process which involves two 4DCT scans. The first scan captures the tumor and immediately surrounding tissue which in turn reduces the 4DCT scan time so that it can be optimally timed with intravenous contrast injection. The second 4DCT scan covers a larger volume and is used as the primary CT dataset for dose calculation, as well as patient setup verification on the treatment unit. The combination of two 4DCT scans, short and long, allows visualization of the liver metastases over all phases of breathing cycle while simultaneously acquiring long enough 4DCT dataset suitable for planning and patient setup verification.

  10. Query-Driven Visualization and Analysis

    SciTech Connect (OSTI)

    Ruebel, Oliver; Bethel, E. Wes; Prabhat, Mr.; Wu, Kesheng

    2012-11-01

    This report focuses on an approach to high performance visualization and analysis, termed query-driven visualization and analysis (QDV). QDV aims to reduce the amount of data that needs to be processed by the visualization, analysis, and rendering pipelines. The goal of the data reduction process is to separate out data that is "scientifically interesting'' and to focus visualization, analysis, and rendering on that interesting subset. The premise is that for any given visualization or analysis task, the data subset of interest is much smaller than the larger, complete data set. This strategy---extracting smaller data subsets of interest and focusing of the visualization processing on these subsets---is complementary to the approach of increasing the capacity of the visualization, analysis, and rendering pipelines through parallelism. This report discusses the fundamental concepts in QDV, their relationship to different stages in the visualization and analysis pipelines, and presents QDV's application to problems in diverse areas, ranging from forensic cybersecurity to high energy physics.

  11. Visualizing Electric Vehicle Sales | Department of Energy

    Office of Energy Efficiency and Renewable Energy (EERE) Indexed Site

    Visualizing Electric Vehicle Sales Visualizing Electric Vehicle Sales Data compiled by Yan (Joann) Zhou at Argonne National Laboratory. (*) Sales from the second quarter of 2013 for Tesla Model S are based off of estimates provided by the Hybrid Market Dashboard. Data updated 1/20/15.

  12. Occam's Razor and Petascale Visual Data Analysis

    SciTech Connect (OSTI)

    Bethel, E. Wes; Johnson, Chris; Ahern, Sean; Bell, John; Bremer, Peer-Timo; Childs, Hank; Cormier-Michel, Estelle; Day, Marc; Deines, Eduard; Fogal, Tom; Garth, Christoph; Geddes, Cameron; Hagen, Hans; Hamann, Bernd; Hansen, Charles; Jacobsen, Janet; Joy, Ken; Kruger, Jens; Meredith, Jeremy; Messmer, Peter; Ostrouchov, George; Pascucci, Valerio; Potter, Kristi; Prabhat, D.; Pugmire, David; Rubel, Oliver; Sanderson, Allen; Silva, Claudio; Ushizima, Daniela; Weber, Gunther; Whitlock, Brad; Wu, Kesheng

    2009-06-12

    One of the central challenges facing visualization research is how to effectively enable knowledge discovery. An effective approach will likely combine application architectures that are capable of running on today?s largest platforms to address the challenges posed by large data with visual data analysis techniques that help find, represent, and effectively convey scientifically interesting features and phenomena.

  13. SAMPLES Visualization Tools V1.0

    Energy Science and Technology Software Center (OSTI)

    2000-01-17

    The SAMPLE Visualization Tools CD consists of a 2D Process Visualizer, 3D Visualizer, and integration code for use with AutoCAD uner Windows NT. The tools are intended to be an add-on package to the SAMPLES (Sandia Agile MEMS Prototyping, Layout Tools, Education and Services). Program CD, a previously published Sandia software package. The 2D Process Visualizer creates 2D cross-section slice views of a MEMS (micro-electromechanical)design. Views are created for each step in the MEMS fabricationmore » process. The 2D viewer has capabilities to pan, zoom, step forward and backward to allow the user to inspect the design. The 3D Visualizer creates an extruded-model view of a MEMS design. The 3D viewer has capabilities to pan, zoom, and fly around the model to allow the user to inspect the design.« less

  14. Computer systems and methods for visualizing data

    DOE Patents [OSTI]

    Stolte, Chris; Hanrahan, Patrick

    2010-07-13

    A method for forming a visual plot using a hierarchical structure of a dataset. The dataset comprises a measure and a dimension. The dimension consists of a plurality of levels. The plurality of levels form a dimension hierarchy. The visual plot is constructed based on a specification. A first level from the plurality of levels is represented by a first component of the visual plot. A second level from the plurality of levels is represented by a second component of the visual plot. The dataset is queried to retrieve data in accordance with the specification. The data includes all or a portion of the dimension and all or a portion of the measure. The visual plot is populated with the retrieved data in accordance with the specification.

  15. Nanoparticle Research Creates Great Contrast | GE Global Research

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Nanoparticle Research Creates Great Contrast Click to email this to a friend (Opens in new window) Share on Facebook (Opens in new window) Click to share (Opens in new window) ...

  16. Contrast from rotating frame relaxation by adiabatic pulses

    DOE Patents [OSTI]

    Michaeli, Shalom; Garwood, Michael G.; Ugurbil, Kamil; Sorce, Dennis J.

    2007-10-09

    This document discusses, among other things, a system and method for modulating transverse and longitudinal relaxation time contrast in a rotating frame based on a train of radio frequency pulses.

  17. Speckle contrast diffuse correlation tomography of complex turbid medium flow

    SciTech Connect (OSTI)

    Huang, Chong; Irwin, Daniel; Lin, Yu; Shang, Yu; He, Lian; Kong, Weikai; Yu, Guoqiang; Luo, Jia

    2015-07-15

    Purpose: Developed herein is a three-dimensional (3D) flow contrast imaging system leveraging advancements in the extension of laser speckle contrast imaging theories to deep tissues along with our recently developed finite-element diffuse correlation tomography (DCT) reconstruction scheme. This technique, termed speckle contrast diffuse correlation tomography (scDCT), enables incorporation of complex optical property heterogeneities and sample boundaries. When combined with a reflectance-based design, this system facilitates a rapid segue into flow contrast imaging of larger, in vivo applications such as humans. Methods: A highly sensitive CCD camera was integrated into a reflectance-based optical system. Four long-coherence laser source positions were coupled to an optical switch for sequencing of tomographic data acquisition providing multiple projections through the sample. This system was investigated through incorporation of liquid and solid tissue-like phantoms exhibiting optical properties and flow characteristics typical of human tissues. Computer simulations were also performed for comparisons. A uniquely encountered smear correction algorithm was employed to correct point-source illumination contributions during image capture with the frame-transfer CCD and reflectance setup. Results: Measurements with scDCT on a homogeneous liquid phantom showed that speckle contrast-based deep flow indices were within 12% of those from standard DCT. Inclusion of a solid phantom submerged below the liquid phantom surface allowed for heterogeneity detection and validation. The heterogeneity was identified successfully by reconstructed 3D flow contrast tomography with scDCT. The heterogeneity center and dimensions and averaged relative flow (within 3%) and localization were in agreement with actuality and computer simulations, respectively. Conclusions: A custom cost-effective CCD-based reflectance 3D flow imaging system demonstrated rapid acquisition of dense boundary

  18. VisIt - 3D Scientific Visualization

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    VisIt VisIt - 3D Scientific Visualization Description and Overview VisIt is a point-and-click 3D scientific visualization application that supports most common visualization techniques (e.g., iso-contouring and volume rendering) on structured and unstructured grids. Due to its distributed and parallel architecture, VisIt is able to handle very large datasets interactively. In addition, VisIt is extensible, allowing users to add data loaders or additional analysis tools to VisIt. The NERSC

  19. Visual inspection reliability for precision manufactured parts

    DOE Public Access Gateway for Energy & Science Beta (PAGES Beta)

    See, Judi E.

    2015-09-04

    Sandia National Laboratories conducted an experiment for the National Nuclear Security Administration to determine the reliability of visual inspection of precision manufactured parts used in nuclear weapons. In addition visual inspection has been extensively researched since the early 20th century; however, the reliability of visual inspection for nuclear weapons parts has not been addressed. In addition, the efficacy of using inspector confidence ratings to guide multiple inspections in an effort to improve overall performance accuracy is unknown. Further, the workload associated with inspection has not been documented, and newer measures of stress have not been applied.

  20. Multimedia Analysis plus Visual Analytics = Multimedia Analytics

    SciTech Connect (OSTI)

    Chinchor, Nancy; Thomas, James J.; Wong, Pak C.; Christel, Michael; Ribarsky, Martin W.

    2010-10-01

    Multimedia analysis has focused on images, video, and to some extent audio and has made progress in single channels excluding text. Visual analytics has focused on the user interaction with data during the analytic process plus the fundamental mathematics and has continued to treat text as did its precursor, information visualization. The general problem we address in this tutorial is the combining of multimedia analysis and visual analytics to deal with multimedia information gathered from different sources, with different goals or objectives, and containing all media types and combinations in common usage.

  1. Linking Advanced Visualization and MATLAB for the Analysis of...

    Office of Scientific and Technical Information (OSTI)

    Linking Advanced Visualization and MATLAB for the Analysis of 3D Gene Expression Data Citation Details In-Document Search Title: Linking Advanced Visualization and MATLAB for the ...

  2. Visualizing Group II Intron Catalysis through the Stages of Splicing...

    Office of Scientific and Technical Information (OSTI)

    SciTech Connect Search Results Journal Article: Visualizing Group II Intron Catalysis through the Stages of Splicing Citation Details In-Document Search Title: Visualizing Group II ...

  3. Visualization and Analysis of 3D Gene Expression Data (Technical...

    Office of Scientific and Technical Information (OSTI)

    Technical Report: Visualization and Analysis of 3D Gene Expression Data Citation Details In-Document Search Title: Visualization and Analysis of 3D Gene Expression Data Recent...

  4. Abengoa Solar Visual Inspection Tool | Department of Energy

    Office of Energy Efficiency and Renewable Energy (EERE) Indexed Site

    Abengoa Solar Visual Inspection Tool Abengoa Solar Visual Inspection Tool Presented at the ... - 27 2013, Golden, Colorado Final Report - Improved Large Aperture Collector Manufacturing

  5. Visualization of Fuel Cell Water Transport and Performance Characteriz...

    Office of Energy Efficiency and Renewable Energy (EERE) Indexed Site

    Visualization of Fuel Cell Water Transport and Performance Characterization under Freezing ... More Documents & Publications Visualization of Fuel Cell Water Transport and ...

  6. Thematic World Wide Web Visualization System

    Energy Science and Technology Software Center (OSTI)

    1996-10-10

    WebTheme is a system designed to facilitate world wide web information access and retrieval through visualization. It consists of two principal pieces, a WebTheme Server which allows users to enter in a query and automatocally harvest and process information of interest, and a WebTheme browser, which allows users to work with both Galaxies and Themescape visualizations of their data within a JAVA capable world wide web browser. WebTheme is an Internet solution, meaning that accessmore » to the server and the resulting visualizations can all be performed through the use of a WWW browser. This allows users to access and interact with SPIRE (Spatial Paradigm for Information Retrieval and Exploration) based visualizations through a web browser regardless of what computer platforms they are running on. WebTheme is specifically designed to create databases by harvesting and processing WWW home pages available on the Internet.« less

  7. Ontology-enriched Visualization of Human Anatomy

    SciTech Connect (OSTI)

    Pouchard, LC

    2005-12-20

    The project focuses on the problem of presenting a human anatomical 3D model associated with other types of human systemic information ranging from physiological to anatomical information while navigating the 3D model. We propose a solution that integrates a visual 3D interface and navigation features with the display of structured information contained in an ontology of anatomy where the structures of the human body are formally and semantically linked. The displayed and annotated anatomy serves as a visual entry point into a patient's anatomy, medical indicators and other information. The ontology of medical information provides labeling to the highlighted anatomical parts in the 3D display. Because of the logical organization and links between anatomical objects found in the ontology and associated 3D model, the analysis of a structure by a physician is greatly enhanced. Navigation within the 3D visualization and between this visualization and objects representing anatomical concepts within the model is also featured.

  8. Visualizing Energy Resources Dynamically on Earth (VERDE)

    Energy Science and Technology Software Center (OSTI)

    2009-06-01

    VERDE is a software service that ingests data on real-time eneryg grid status and analyzes the data with models and algorithms presenting the output in a form that can be visualized by client spatio-temporal browsers

  9. BPA's Visual Guidelines Quick Guide - 2015

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    35 The Visual Guidelines for BPA's Brand document can be found at www.bpa.govgotoBranding | Updated 2015 RGB 139 91 41 50 58 100 45 RGB 90 72 28 HEX 955300 HEX 5A481C 382 C...

  10. Building Adoption of Visual Analytics Software

    SciTech Connect (OSTI)

    Chinchor, Nancy; Cook, Kristin A.; Scholtz, Jean

    2012-01-05

    Adoption of technology is always difficult. Issues such as having the infrastructure necessary to support the technology, training for users, integrating the technology into current processes and tools, and having the time, managerial support, and necessary funds need to be addressed. In addition to these issues, the adoption of visual analytics tools presents specific challenges that need to be addressed. This paper discusses technology adoption challenges and approaches for visual analytics technologies.

  11. Finite Element Results Visualization for Unstructured Grids

    Energy Science and Technology Software Center (OSTI)

    1996-07-15

    GRIZ is a general-purpose post-processing application supporting interactive visualization of finite element analysis results on unstructured grids. In addition to basic pseudocolor renderings of state variables over the mesh surface, GRIZ provides modern visualization techniques such as isocontours and isosurfaces, cutting planes, vector field display, and particle traces. GRIZ accepts both command-line and mouse-driven input, and is portable to virtually any UNIX platform which provides Motif and OpenGl libraries.

  12. Differential phase contrast X-ray imaging system and components

    DOE Patents [OSTI]

    Stutman, Daniel; Finkenthal, Michael

    2014-07-01

    A differential phase contrast X-ray imaging system includes an X-ray illumination system, a beam splitter arranged in an optical path of the X-ray illumination system, and a detection system arranged in an optical path to detect X-rays after passing through the beam splitter.

  13. Dynamic Studies of Lung Fluid Clearance with Phase Contrast Imaging

    SciTech Connect (OSTI)

    Kitchen, Marcus J.; Williams, Ivan; Irvine, Sarah C.; Morgan, Michael J.; Paganin, David M.; Lewis, Rob A.; Pavlov, Konstantin; Hooper, Stuart B.; Wallace, Megan J.; Siu, Karen K. W.; Yagi, Naoto; Uesugi, Kentaro

    2007-01-19

    Clearance of liquid from the airways at birth is a poorly understood process, partly due to the difficulties of observing and measuring the distribution of air within the lung. Imaging dynamic processes within the lung in vivo with high contrast and spatial resolution is therefore a major challenge. However, phase contrast X-ray imaging is able to exploit inhaled air as a contrast agent, rendering the lungs of small animals visible due to the large changes in the refractive index at air/tissue interfaces. In concert with the high spatial resolution afforded by X-ray imaging systems (<100 {mu}m), propagation-based phase contrast imaging is ideal for studying lung development. To this end we have utilized intense, monochromatic synchrotron radiation, together with a fast readout CCD camera, to study fluid clearance from the lungs of rabbit pups at birth. Local rates of fluid clearance have been measured from the dynamic sequences using a single image phase retrieval algorithm.

  14. Analyzer-based phase-contrast imaging system using a micro focus x-ray source

    SciTech Connect (OSTI)

    Zhou, Wei; Majidi, Keivan; Brankov, Jovan G.

    2014-08-15

    Here we describe a new in-laboratory analyzer based phase contrast-imaging (ABI) instrument using a conventional X-ray tube source (CXS) aimed at bio-medical imaging applications. Phase contrast-imaging allows visualization of soft tissue details usually obscured in conventional X-ray imaging. The ABI system design and major features are described in detail. The key advantage of the presented system, over the few existing CXS ABI systems, is that it does not require high precision components, i.e., CXS, X-ray detector, and electro-mechanical components. To overcome a main problem introduced by these components, identified as temperature stability, the system components are kept at a constant temperature inside of three enclosures, thus minimizing the electrical and mechanical thermal drifts. This is achieved by using thermoelectric (Peltier) cooling/heating modules that are easy to control precisely. For CXS we utilized a microfocus X-ray source with tungsten (W) anode material. In addition the proposed system eliminates tungsten's multiple spectral lines by selecting monochromator crystal size appropriately therefore eliminating need for the costly mismatched, two-crystal monochromator. The system imaging was fine-tuned for tungsten Kα{sub 1} line with the energy of 59.3 keV since it has been shown to be of great clinical significance by a number of researchers at synchrotron facilities. In this way a laboratory system that can be used for evaluating and quantifying tissue properties, initially explored at synchrotron facilities, would be of great interest to a larger research community. To demonstrate the imaging capability of our instrument we use a chicken thigh tissue sample.

  15. Visualization and Analysis in Support of Fusion Science

    SciTech Connect (OSTI)

    Sanderson, Allen R.

    2012-10-01

    This report summarizes the results of the award for “Visualization and Analysis in Support of Fusion Science.” With this award our main efforts have been to develop and deploy visualization and analysis tools in three areas 1) magnetic field line analysis 2) query based visualization and 3) comparative visualization.

  16. System and method for floating-substrate passive voltage contrast

    DOE Patents [OSTI]

    Jenkins, Mark W.; Cole, Jr., Edward I.; Tangyunyong, Paiboon; Soden, Jerry M.; Walraven, Jeremy A.; Pimentel, Alejandro A.

    2009-04-28

    A passive voltage contrast (PVC) system and method are disclosed for analyzing ICs to locate defects and failure mechanisms. During analysis a device side of a semiconductor die containing the IC is maintained in an electrically-floating condition without any ground electrical connection while a charged particle beam is scanned over the device side. Secondary particle emission from the device side of the IC is detected to form an image of device features, including electrical vias connected to transistor gates or to other structures in the IC. A difference in image contrast allows the defects or failure mechanisms be pinpointed. Varying the scan rate can, in some instances, produce an image reversal to facilitate precisely locating the defects or failure mechanisms in the IC. The system and method are useful for failure analysis of ICs formed on substrates (e.g. bulk semiconductor substrates and SOI substrates) and other types of structures.

  17. High-contrast and fast electrochromic switching enabled by plasmonics

    DOE Public Access Gateway for Energy & Science Beta (PAGES Beta)

    Xu, Ting; Walter, Erich C.; Agrawal, Amit; Bohn, Christopher; Velmurugan, Jeyavel; Zhu, Wenqi; Lezec, Henri J.; Talin, A. Alec

    2016-01-27

    With vibrant colours and simple, room-temperature processing methods, electrochromic polymers have attracted attention as active materials for flexible, low-power-consuming devices. However, slow switching speeds in devices realized to date, as well as the complexity of having to combine several distinct polymers to achieve a full-colour gamut, have limited electrochromic materials to niche applications. Here we achieve fast, high-contrast electrochromic switching by significantly enhancing the interaction of light—propagating as deep-subwavelength-confined surface plasmon polaritons through arrays of metallic nanoslits, with an electrochromic polymer—present as an ultra-thin coating on the slit sidewalls. The switchable configuration retains the short temporal charge-diffusion characteristics of thinmore » electrochromic films, while maintaining the high optical contrast associated with thicker electrochromic coatings. In conclusion, we further demonstrate that by controlling the pitch of the nanoslit arrays, it is possible to achieve a full-colour response with high contrast and fast switching speeds, while relying on just one electrochromic polymer.« less

  18. Navigating nuclear science: Enhancing analysis through visualization

    SciTech Connect (OSTI)

    Irwin, N.H.; Berkel, J. van; Johnson, D.K.; Wylie, B.N.

    1997-09-01

    Data visualization is an emerging technology with high potential for addressing the information overload problem. This project extends the data visualization work of the Navigating Science project by coupling it with more traditional information retrieval methods. A citation-derived landscape was augmented with documents using a text-based similarity measure to show viability of extension into datasets where citation lists do not exist. Landscapes, showing hills where clusters of similar documents occur, can be navigated, manipulated and queried in this environment. The capabilities of this tool provide users with an intuitive explore-by-navigation method not currently available in today`s retrieval systems.

  19. A Visualization Tool for Meteorological Data

    Energy Science and Technology Software Center (OSTI)

    1999-09-28

    Graphical user interfaces (GUIs) have been buit to visualize surface and upper-meteorology data for any global location and time of interest. The user selects a domain (geographic location and bounding range) and time of interest using the Gui, and a file containing coded observations is accessed and decoded. two styles of the GUI have been built, depending on whether surface or upper air visualization is desired. The former indicates weather conditions near the earth''s surface,more » while the latter illustrates a vertical profile of atmospheric conditions.« less

  20. Framework for an Information Visualization System

    Energy Science and Technology Software Center (OSTI)

    2006-08-11

    The Program is a suite of Windows-based software applications and services for ingesting, storing, and analyzing large quantities of disparate inforamtion. The software supports the ingestion and storage of any information that can be represented in eXtensible Markup Language (XML) format. Stored information can be subsequently retrieved via search operations, then "visualized" in multiple ways using a client application that supports a variety of analytical functions. Visualization capabilities include tools for depicting a variety ofmore » relationships that may be present in the information, including geospatial, temporal, topical, categorical, and network relationships.« less

  1. Visual Matrix Clustering of Social Networks

    SciTech Connect (OSTI)

    Wong, Pak C.; Mackey, Patrick S.; Foote, Harlan P.; May, Richard A.

    2013-07-01

    The prevailing choices to graphically represent a social network in todays literature are a node-link graph layout and an adjacency matrix. Both visualization techniques have unique strengths and weaknesses when applied to different domain applications. In this article, we focus our discussion on adjacency matrix and how to turn the matrix-based visualization technique from merely showing pairwise associations among network actors (or graph nodes) to depicting clusters of a social network. We also use node-link layouts to supplement the discussion.

  2. 3D Imaging of Microbial Biofilms: Integration of Synchrotron Imaging and an Interactive Visualization Interface

    SciTech Connect (OSTI)

    Thomas, Mathew; Marshall, Matthew J.; Miller, Erin A.; Kuprat, Andrew P.; Kleese van Dam, Kerstin; Carson, James P.

    2014-08-26

    Understanding the interactions of structured communities known as “biofilms” and other complex matrixes is possible through the X-ray micro tomography imaging of the biofilms. Feature detection and image processing for this type of data focuses on efficiently identifying and segmenting biofilms and bacteria in the datasets. The datasets are very large and often require manual interventions due to low contrast between objects and high noise levels. Thus new software is required for the effectual interpretation and analysis of the data. This work specifies the evolution and application of the ability to analyze and visualize high resolution X-ray micro tomography datasets.

  3. Automatic visual inspection of hybrid microcircuits

    SciTech Connect (OSTI)

    Hines, R.E.

    1980-05-01

    An automatic visual inspection system using a minicomputer and a video digitizer was developed for inspecting hybrid microcircuits (HMC) and thin-film networks (TFN). The system performed well in detecting missing components on HMCs and reduced the testing time for each HMC by 75%.

  4. Final Report. Institute for Ultralscale Visualization

    SciTech Connect (OSTI)

    Ma, Kwan-Liu; Galli, Giulia; Gygi, Francois; Max, Nelson; Owens, John; Pickett, Warren; Huang, Jian; Humphreys, Gregory; Moreland, Kenneth; Ross, Rob; Shen, Han-Wei; Silver, Deborah

    2015-03-01

    The SciDAC Institute for Ultrascale Visualization brought together leading experts from visualization, high-performance computing, and science application areas to make advanced visualization solutions for SciDAC scientists and the broader community. Over the five-year project, the Institute introduced many new enabling visualization techniques, which have significantly enhanced scientists’ ability to validate their simulations, interpret their data, and communicate with others about their work and findings. This Institute project involved a large number of junior and student researchers, who received the opportunities to work on some of the most challenging science applications and gain access to the most powerful high-performance computing facilities in the world. They were readily trained and prepared for facing the greater challenges presented by extreme-scale computing. The Institute’s outreach efforts, through publications, workshops and tutorials, successfully disseminated the new knowledge and technologies to the SciDAC and the broader scientific communities. The scientific findings and experience of the Institute team helped plan the SciDAC3 program.

  5. Monitoring external beam radiotherapy using real-time beam visualization

    SciTech Connect (OSTI)

    Jenkins, Cesare H.; Naczynski, Dominik J.; Yu, Shu-Jung S.; Xing, Lei

    2015-01-15

    Purpose: To characterize the performance of a novel radiation therapy monitoring technique that utilizes a flexible scintillating film, common optical detectors, and image processing algorithms for real-time beam visualization (RT-BV). Methods: Scintillating films were formed by mixing Gd{sub 2}O{sub 2}S:Tb (GOS) with silicone and casting the mixture at room temperature. The films were placed in the path of therapeutic beams generated by medical linear accelerators (LINAC). The emitted light was subsequently captured using a CMOS digital camera. Image processing algorithms were used to extract the intensity, shape, and location of the radiation field at various beam energies, dose rates, and collimator locations. The measurement results were compared with known collimator settings to validate the performance of the imaging system. Results: The RT-BV system achieved a sufficient contrast-to-noise ratio to enable real-time monitoring of the LINAC beam at 20 fps with normal ambient lighting in the LINAC room. The RT-BV system successfully identified collimator movements with sub-millimeter resolution. Conclusions: The RT-BV system is capable of localizing radiation therapy beams with sub-millimeter precision and tracking beam movement at video-rate exposure.

  6. Cumulative phase delay imaging - A new contrast enhanced ultrasound modality

    SciTech Connect (OSTI)

    Demi, Libertario Sloun, Ruud J. G. van; Mischi, Massimo; Wijkstra, Hessel

    2015-10-28

    Recently, a new acoustic marker for ultrasound contrast agents (UCAs) has been introduced. A cumulative phase delay (CPD) between the second harmonic and fundamental pressure wave field components is in fact observable for ultrasound propagating through UCAs. This phenomenon is absent in the case of tissue nonlinearity and is dependent on insonating pressure and frequency, UCA concentration, and propagation path length through UCAs. In this paper, ultrasound images based on this marker are presented. The ULA-OP research platform, in combination with a LA332 linear array probe (Esaote, Firenze Italy), were used to image a gelatin phantom containing a PVC plate (used as a reflector) and a cylindrical cavity measuring 7 mm in diameter (placed in between the observation point and the PVC plate). The cavity contained a 240 µL/L SonoVueO{sup ®} UCA concentration. Two insonating frequencies (3 MHz and 2.5 MHz) were used to scan the gelatine phantom. A mechanical index MI = 0.07, measured in water at the cavity location with a HGL-0400 hydrophone (Onda, Sunnyvale, CA), was utilized. Processing the ultrasound signals backscattered from the plate, ultrasound images were generated in a tomographic fashion using the filtered back-projection method. As already observed in previous studies, significantly higher CPD values are measured when imaging at a frequency of 2.5 MHz, as compared to imaging at 3 MHz. In conclusion, these results confirm the applicability of the discussed CPD as a marker for contrast imaging. Comparison with standard contrast-enhanced ultrasound imaging modalities will be the focus of future work.

  7. Phase contrast and operation regimes in multifrequency atomic force microscopy

    SciTech Connect (OSTI)

    Santos, Sergio

    2014-04-07

    In amplitude modulation atomic force microscopy the attractive and the repulsive force regimes induce phase shifts above and below 90°, respectively. In the more recent multifrequency approach, however, multiple operation regimes have been reported and the theory should be revisited. Here, a theory of phase contrast in multifrequency atomic force microscopy is developed and discussed in terms of energy transfer between modes, energy dissipation and the kinetic energy and energy transfer associated with externally driven harmonics. The single frequency virial that controls the phase shift might undergo transitions in sign while the average force (modal virial) remains positive (negative)

  8. Fourier-transform and global contrast interferometer alignment methods

    DOE Patents [OSTI]

    Goldberg, Kenneth A.

    2001-01-01

    Interferometric methods are presented to facilitate alignment of image-plane components within an interferometer and for the magnified viewing of interferometer masks in situ. Fourier-transforms are performed on intensity patterns that are detected with the interferometer and are used to calculate pseudo-images of the electric field in the image plane of the test optic where the critical alignment of various components is being performed. Fine alignment is aided by the introduction and optimization of a global contrast parameter that is easily calculated from the Fourier-transform.

  9. SciDAC Institute for Ultra-Scale Visualization: Activity Recognition for Ultra-Scale Visualization

    SciTech Connect (OSTI)

    Silver, Deborah

    2014-04-30

    Understanding the science behind ultra-scale simulations requires extracting meaning from data sets of hundreds of terabytes or more. Developing scalable parallel visualization algorithms is a key step enabling scientists to interact and visualize their data at this scale. However, at extreme scales, the datasets are so huge, there is not even enough time to view the data, let alone explore it with basic visualization methods. Automated tools are necessary for knowledge discovery -- to help sift through the information and isolate characteristic patterns, thereby enabling the scientist to study local interactions, the origin of features and their evolution in large volumes of data. These tools must be able to operate on data of this scale and work with the visualization process. In this project, we developed a framework for activity detection to allow scientists to model and extract spatio-temporal patterns from time-varying data.

  10. Wind Energy Technology Trends: Comparing and Contrasting Recent Cost and Performance Forecasts (Poster)

    SciTech Connect (OSTI)

    Lantz, E.; Hand, M.

    2010-05-01

    Poster depicts wind energy technology trends, comparing and contrasting recent cost and performance forecasts.

  11. File:DIA Visual Development.pdf | Open Energy Information

    Open Energy Info (EERE)

    DIA Visual Development.pdf Jump to: navigation, search File File history File usage File:DIA Visual Development.pdf Size of this preview: 800 600 pixels. Go to page 1 2 3 4 5 6...

  12. Visualization and Analysis of 3D Gene Expression Data (Technical...

    Office of Scientific and Technical Information (OSTI)

    Technical Report: Visualization and Analysis of 3D Gene Expression Data Citation Details In-Document Search Title: Visualization and Analysis of 3D Gene Expression Data You are...

  13. 3D Visualization of Water Transport in Ferns

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    3D Visualization of Water Transport in Ferns 3D Visualization of Water Transport in Ferns Print Monday, 08 April 2013 00:00 Plants transport water through elongated cells called...

  14. OSTIblog Articles in the visualizations Topic | OSTI, US Dept...

    Office of Scientific and Technical Information (OSTI)

    The Jordan Aha Test for Visualizations by Sharon Jordan 24 Mar, 2010 in Technology 1567 Bucky20Ball.png The Jordan Aha Test for Visualizations Read more about 1567 It is said ...

  15. Visualizing OpenEI Data | OpenEI Community

    Open Energy Info (EERE)

    front page? There are several online tools that make organizing and visualizing data free and easy. OpenEI uses Google to visualize data in scatterplots, bar charts, and in the...

  16. Visualization of United States Renewable Consumption | Open Energy...

    Open Energy Info (EERE)

    Visualization of United States Renewable Consumption AgencyCompany Organization: Energy Information Administration Sector: Energy Resource Type: Softwaremodeling tools User...

  17. 7 Key Challenges for Visualization in Cyber Network Defense

    SciTech Connect (OSTI)

    Best, Daniel M.; Endert, Alexander; Kidwell, Dan

    2014-12-02

    In this paper we present seven challenges, informed by two user studies, to be considered when developing a visualization for cyber security purposes. Cyber security visualizations must go beyond isolated solutions and pretty picture visualizations in order to make impact to users. We provide an example prototype that addresses the challenges with a description of how they are met. Our aim is to assist in increasing utility and adoption rates for visualization capabilities in cyber security.

  18. Algorithms, Frameworks and Toolsets for High Performance, Remoteand Distributed Visualization

    SciTech Connect (OSTI)

    Bethel, E. Wes; Shalf, John M.

    2005-07-01

    This document is a two-page summary of research accomplishments in the LBNL Visualization program during FY2005.

  19. Prediction of the visual impact of motorways using GIS

    SciTech Connect (OSTI)

    Jiang, Like; Kang, Jian; Schroth, Olaf

    2015-11-15

    Large scale transportation projects can adversely affect the visual perception of environmental quality and require adequate visual impact assessment. In this study, we investigated the effects of the characteristics of the road project and the character of the existing landscape on the perceived visual impact of motorways, and developed a GIS-based prediction model based on the findings. An online survey using computer-visualised scenes of different motorway and landscape scenarios was carried out to obtain perception-based judgements on the visual impact. Motorway scenarios simulated included the baseline scenario without road, original motorway, motorways with timber noise barriers, transparent noise barriers and tree screen; different landscape scenarios were created by changing land cover of buildings and trees in three distance zones. The landscape content of each scene was measured in GIS. The result shows that presence of a motorway especially with the timber barrier significantly decreases the visual quality of the view. The resulted visual impact tends to be lower where it is less visually pleasant with more buildings in the view, and can be slightly reduced by the visual absorption effect of the scattered trees between the motorway and the viewpoint. Based on the survey result, eleven predictors were identified for the visual impact prediction model which was applied in GIS to generate maps of visual impact of motorways in different scenarios. The proposed prediction model can be used to achieve efficient and reliable assessment of visual impact of motorways. - Highlights: • Motorways induce significant visual impact especially with timber noise barriers. • Visual impact is negatively correlated with amount of buildings in the view. • Visual impact is positively correlated with percentage of trees in the view. • Perception-based motorway visual impact prediction model using mapped predictors • Predicted visual impacts in different scenarios are

  20. Structural Monitoring System (SMS) and Visual System (VS) | Department of

    Office of Energy Efficiency and Renewable Energy (EERE) Indexed Site

    Energy Structural Monitoring System (SMS) and Visual System (VS) Structural Monitoring System (SMS) and Visual System (VS) Axis Communications, Inc. has developed network ready, environmentally tolerant, low-light level camera-visual systems (VS) with built-in pan and tilt mechanisms that permit remote monitoring of facilities that are in standby mode. Structural Monitoring System (SMS) and Visual System (VS) (188.51 KB) More Documents & Publications GammaCam Technology Demonstration at

  1. Geographic Visualization of Power-Grid Dynamics

    SciTech Connect (OSTI)

    Sukumar, Sreenivas R.

    2015-06-18

    The visualization enables the simulation analyst to see changes in the frequency through time and space. With this technology, the analyst has a bird's eye view of the frequency at loads and generators as the simulated power system responds to the loss of a generator, spikes in load, and other contingencies. The significance of a contingency to the operation of an electrical power system depends critically on how the resulting tansients evolve in time and space. Consequently, these dynamic events can only be understood when seen in their proper geographic context. this understanding is indispensable to engineers working on the next generation of distributed sensing and control systems for the smart grid. By making possible a natural and intuitive presentation of dynamic behavior, our new visualization technology is a situational-awareness tool for power-system engineers.

  2. Topological Cacti: Visualizing Contour-based Statistics

    SciTech Connect (OSTI)

    Weber, Gunther H.; Bremer, Peer-Timo; Pascucci, Valerio

    2011-05-26

    Contours, the connected components of level sets, play an important role in understanding the global structure of a scalar field. In particular their nestingbehavior and topology-often represented in form of a contour tree-have been used extensively for visualization and analysis. However, traditional contour trees onlyencode structural properties like number of contours or the nesting of contours, but little quantitative information such as volume or other statistics. Here we use thesegmentation implied by a contour tree to compute a large number of per-contour (interval) based statistics of both the function defining the contour tree as well asother co-located functions. We introduce a new visual metaphor for contour trees, called topological cacti, that extends the traditional toporrery display of acontour tree to display additional quantitative information as width of the cactus trunk and length of its spikes. We apply the new technique to scalar fields ofvarying dimension and different measures to demonstrate the effectiveness of the approach.

  3. Geographic Visualization of Power-Grid Dynamics

    Energy Science and Technology Software Center (OSTI)

    2015-06-18

    The visualization enables the simulation analyst to see changes in the frequency through time and space. With this technology, the analyst has a bird's eye view of the frequency at loads and generators as the simulated power system responds to the loss of a generator, spikes in load, and other contingencies. The significance of a contingency to the operation of an electrical power system depends critically on how the resulting tansients evolve in time andmore » space. Consequently, these dynamic events can only be understood when seen in their proper geographic context. this understanding is indispensable to engineers working on the next generation of distributed sensing and control systems for the smart grid. By making possible a natural and intuitive presentation of dynamic behavior, our new visualization technology is a situational-awareness tool for power-system engineers.« less

  4. Introduction to Reading and Visualizing ARM Data

    SciTech Connect (OSTI)

    Mather, James

    2014-02-18

    Atmospheric Radiation Measurement (ARM) Program standard data format is NetCDF 3 (Network Common Data Form). The object of this tutorial is to provide a basic introduction to NetCDF with an emphasis on aspects of the ARM application of NetCDF. The goal is to provide basic instructions for reading and visualizing ARM NetCDF data with the expectation that these examples can then be applied to more complex applications.

  5. APPLYING SIMPLE TECHNOLOGY ACCOMPLISHES VISUAL INSPECTION CHALLENGES

    SciTech Connect (OSTI)

    Robinson, C

    2007-07-21

    This paper discusses the successful implementation of simple video technologies at the Savannah River Site (SRS) to perform complex visual inspection, monitoring, and surveillance tasks. Because SRS facilities are similar to those of an industrial plant, the environmental and accessibility considerations for remote viewing are the primary determining factors in the selection of technology. The constraints and challenges associated with remote viewing are discussed, and examples of applications are given.

  6. Ultrascale visualization capabilities for the ParaView/VTK framework

    Energy Science and Technology Software Center (OSTI)

    2009-06-09

    The software is a set of technologies developed by the SciDAC Institute for Ultrascale Visualization in order to address the visualization needs for petascale computing and beyond. These technologies include improved I/O performance, simulation co-processing, advanced rendering capabilities, and specialized visualization techniques developed for SciDAC applications.

  7. Multidimensional structured data visualization method and apparatus, text visualization method and apparatus, method and apparatus for visualizing and graphically navigating the world wide web, method and apparatus for visualizing hierarchies

    DOE Patents [OSTI]

    Risch, John S.; Dowson, Scott T.

    2012-03-06

    A method of displaying correlations among information objects includes receiving a query against a database; obtaining a query result set; and generating a visualization representing the components of the result set, the visualization including one of a plane and line to represent a data field, nodes representing data values, and links showing correlations among fields and values. Other visualization methods and apparatus are disclosed.

  8. Multidimensional structured data visualization method and apparatus, text visualization method and apparatus, method and apparatus for visualizing and graphically navigating the world wide web, method and apparatus for visualizing hierarchies

    DOE Patents [OSTI]

    Risch, John S.; Dowson, Scott T.; Hart, Michelle L.; Hatley, Wes L.

    2008-05-13

    A method of displaying correlations among information objects comprises receiving a query against a database; obtaining a query result set; and generating a visualization representing the components of the result set, the visualization including one of a plane and line to represent a data field, nodes representing data values, and links showing correlations among fields and values. Other visualization methods and apparatus are disclosed.

  9. Multivariate volume visualization through dynamic projections

    SciTech Connect (OSTI)

    Liu, Shusen; Wang, Bei; Thiagarajan, Jayaraman J.; Bremer, Peer -Timo; Pascucci, Valerio

    2014-11-01

    We propose a multivariate volume visualization framework that tightly couples dynamic projections with a high-dimensional transfer function design for interactive volume visualization. We assume that the complex, high-dimensional data in the attribute space can be well-represented through a collection of low-dimensional linear subspaces, and embed the data points in a variety of 2D views created as projections onto these subspaces. Through dynamic projections, we present animated transitions between different views to help the user navigate and explore the attribute space for effective transfer function design. Our framework not only provides a more intuitive understanding of the attribute space but also allows the design of the transfer function under multiple dynamic views, which is more flexible than being restricted to a single static view of the data. For large volumetric datasets, we maintain interactivity during the transfer function design via intelligent sampling and scalable clustering. As a result, using examples in combustion and climate simulations, we demonstrate how our framework can be used to visualize interesting structures in the volumetric space.

  10. Radial velocities of southern visual multiple stars

    SciTech Connect (OSTI)

    Tokovinin, Andrei; Pribulla, Theodor; Fischer, Debra E-mail: pribulla@ta3.sk

    2015-01-01

    High-resolution spectra of visual multiple stars were taken in 20082009 to detect or confirm spectroscopic subsystems and to determine their orbits. Radial velocities of 93 late-type stars belonging to visual multiple systems were measured by numerical cross-correlation. We provide the individual velocities, the width, and the amplitude of the Gaussians that approximate the correlations. The new information on the multiple systems resulting from these data is discussed. We discovered double-lined binaries in HD 41742B, HD 56593C, and HD 122613AB, confirmed several other known subsystems, and constrained the existence of subsystems in some visual binaries where both components turned out to have similar velocities. The orbits of double-lined subsystems with periods of 148 and 13 days are computed for HD 104471 Aa,Ab and HD 210349 Aa,Ab, respectively. We estimate individual magnitudes and masses of the components in these triple systems and update the outer orbit of HD 104471 AB.

  11. Dependency visualization for complex system understanding

    SciTech Connect (OSTI)

    Smart, J.A.C.

    1994-09-01

    With the volume of software in production use dramatically increasing, the importance of software maintenance has become strikingly apparent. Techniques now sought and developed for reverse engineering and design extraction and recovery. At present, numerous commercial products and research tools exist which are capable of visualizing a variety of programming languages and software constructs. The list of new tools and services continues to grow rapidly. Although the scope of the existing commercial and academic product set is quite broad, these tools still share a common underlying problem. The ability of each tool to visually organize object representations is increasingly impaired as the number of components and component dependencies within systems increases. Regardless of how objects are defined, complex ``spaghetti`` networks result in nearly all large system cases. While this problem is immediately apparent in modem systems analysis involving large software implementations, it is not new. As will be discussed in Chapter 2, related problems involving the theory of graphs were identified long ago. This important theoretical foundation provides a useful vehicle for representing and analyzing complex system structures. While the utility of directed graph based concepts in software tool design has been demonstrated in literature, these tools still lack the capabilities necessary for large system comprehension. This foundation must therefore be expanded with new orgnizational and visualization constructs necessary to meet this challenge. This dissertation addresses this need by constructing a conceptual model and a set of methods for interactively exploring, organizing, and understanding the structure of complex software systems.

  12. Contrast enhancing solution for use in confocal microscopy

    DOE Patents [OSTI]

    Tannous, Zeina; Torres, Abel; Gonzalez, Salvador

    2006-10-31

    A method of optically detecting a tumor during surgery. The method includes imaging at least one test point defined on the tumor using a first optical imaging system to provide a first tumor image. The method further includes excising a first predetermined layer of the tumor for forming an in-vivo defect area. A predetermined contrast enhancing solution is disposed on the in-vivo defect area, which is adapted to interact with at least one cell anomaly, such as basal cell carcinoma, located on the in-vivo defect area for optically enhancing the cell anomaly. Thereafter the defect area can be optically imaged to provide a clear and bright representation of the cell anomaly to aid a surgeon while surgically removing the cell anomaly.

  13. Visual probes and methods for placing visual probes into subsurface areas

    DOE Patents [OSTI]

    Clark, Don T.; Erickson, Eugene E.; Casper, William L.; Everett, David M.

    2004-11-23

    Visual probes and methods for placing visual probes into subsurface areas in either contaminated or non-contaminated sites are described. In one implementation, the method includes driving at least a portion of a visual probe into the ground using direct push, sonic drilling, or a combination of direct push and sonic drilling. Such is accomplished without providing an open pathway for contaminants or fugitive gases to reach the surface. According to one implementation, the invention includes an entry segment configured for insertion into the ground or through difficult materials (e.g., concrete, steel, asphalt, metals, or items associated with waste), at least one extension segment configured to selectively couple with the entry segment, at least one push rod, and a pressure cap. Additional implementations are contemplated.

  14. OSTIblog Articles in the visualizations Topic | OSTI, US Dept of Energy

    Office of Scientific and Technical Information (OSTI)

    Office of Scientific and Technical Information visualizations Topic

  15. Visual examinations of K east fuel elements

    SciTech Connect (OSTI)

    Pitner, A.L., Fluor Daniel Hanford

    1997-02-03

    Selected fuel elements stored in both ``good fuel`` and ``bad fuel`` canisters in K East Basin were extracted and visually examined full length for damage. Lower end damage in the ``bad fuel`` canisters was found to be more severe than expected based on top end appearances. Lower end damage for the ``good fuel`` canisters, however, was less than expected based on top end observations. Since about half of the fuel in K East Basin is contained in ``good fuel`` canisters based on top end assessments, the fraction of fuel projected to be intact with respect to IPS processing considerations remains at 50% based on these examination results.

  16. Visualizing Brain Metals in Health and Disease

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Visualizing Brain Metals in Health and Disease figure 1 Fig. 1. Rapid-scanning x-ray fluorescence mapping ex perimental setup. Synchrotron x-rays at 11 keV passed through a 50 µm aperture (Ap). The beam intensity was monitored with a N2-filled ion chamber (I0). The brain slice was mounted vertically on a motorized stage (St) at 45° to the incident x-ray beam and raster scanned in the beam. A 13-element Ge detector (Ge) was positioned at a 90° angle to the beam. We all require iron, copper and

  17. Hydraulic flow visualization method and apparatus

    DOE Patents [OSTI]

    Karidis, P.G.

    1984-01-01

    An apparatus and method for visualizing liquid flow. Pulses of gas bubbles are introduced into a liquid flow stream and a strobe light is operated at a frequency related to the frequency of the gas pulses to shine on the bubbles as they pass through the liquid stream. The gas pulses pass through a probe body having a valve element, and a reciprocating valve stem passes through the probe body to operate the valve element. A stem actuating device comprises a slidable reciprocating member, operated by a crank arm. The actuated member is adjustable to adjust the amount of the valve opening during each pulse.

  18. Visualization of information with an established order

    DOE Patents [OSTI]

    Wong, Pak Chung; Foote, Harlan P.; Thomas, James J.; Wong, Kwong-Kwok

    2007-02-13

    Among the embodiments of the present invention is a system including one or more processors operable to access data representative of a biopolymer sequence of monomer units. The one or more processors are further operable to establish a pattern corresponding to at least one fractal curve and generate one or more output signals corresponding to a number of image elements each representative of one of the monomer units. Also included is a display device responsive to the one or more output signals to visualize the biopolymer sequence by displaying the image elements in accordance with the pattern.

  19. Sequential pattern data mining and visualization

    DOE Patents [OSTI]

    Wong, Pak Chung (Richland, WA); Jurrus, Elizabeth R. (Kennewick, WA); Cowley, Wendy E. (Benton City, WA); Foote, Harlan P. (Richland, WA); Thomas, James J. (Richland, WA)

    2011-12-06

    One or more processors (22) are operated to extract a number of different event identifiers therefrom. These processors (22) are further operable to determine a number a display locations each representative of one of the different identifiers and a corresponding time. The display locations are grouped into sets each corresponding to a different one of several event sequences (330a, 330b, 330c. 330d, 330e). An output is generated corresponding to a visualization (320) of the event sequences (330a, 330b, 330c, 330d, 330e).

  20. Sequential pattern data mining and visualization

    DOE Patents [OSTI]

    Wong, Pak Chung (Richland, WA); Jurrus, Elizabeth R. (Kennewick, WA); Cowley, Wendy E. (Benton City, WA); Foote, Harlan P. (Richland, WA); Thomas, James J. (Richland, WA)

    2009-05-26

    One or more processors (22) are operated to extract a number of different event identifiers therefrom. These processors (22) are further operable to determine a number a display locations each representative of one of the different identifiers and a corresponding time. The display locations are grouped into sets each corresponding to a different one of several event sequences (330a, 330b, 330c. 330d, 330e). An output is generated corresponding to a visualization (320) of the event sequences (330a, 330b, 330c, 330d, 330e).

  1. Contrasting Behavior of GaP(001) and InP(001) at the Interface...

    Office of Scientific and Technical Information (OSTI)

    Contrasting Behavior of GaP(001) and InP(001) at the Interface with Water Citation Details In-Document Search Title: Contrasting Behavior of GaP(001) and InP(001) at the Interface ...

  2. Visual Analytics for Power Grid Contingency Analysis

    SciTech Connect (OSTI)

    Wong, Pak C.; Huang, Zhenyu; Chen, Yousu; Mackey, Patrick S.; Jin, Shuangshuang

    2014-01-20

    Contingency analysis is the process of employing different measures to model scenarios, analyze them, and then derive the best response to remove the threats. This application paper focuses on a class of contingency analysis problems found in the power grid management system. A power grid is a geographically distributed interconnected transmission network that transmits and delivers electricity from generators to end users. The power grid contingency analysis problem is increasingly important because of both the growing size of the underlying raw data that need to be analyzed and the urgency to deliver working solutions in an aggressive timeframe. Failure to do so may bring significant financial, economic, and security impacts to all parties involved and the society at large. The paper presents a scalable visual analytics pipeline that transforms about 100 million contingency scenarios to a manageable size and form for grid operators to examine different scenarios and come up with preventive or mitigation strategies to address the problems in a predictive and timely manner. Great attention is given to the computational scalability, information scalability, visual scalability, and display scalability issues surrounding the data analytics pipeline. Most of the large-scale computation requirements of our work are conducted on a Cray XMT multi-threaded parallel computer. The paper demonstrates a number of examples using western North American power grid models and data.

  3. From Question Answering to Visual Exploration

    SciTech Connect (OSTI)

    McColgin, Dave W.; Gregory, Michelle L.; Hetzler, Elizabeth G.; Turner, Alan E.

    2006-08-11

    Research in Question Answering has focused on the quality of information retrieval or extraction using the metrics of precision and recall to judge success; these metrics drive toward finding the specific best answer(s) and are best supportive of a lookup type of search. These do not address the opportunity that users? natural language questions present for exploratory interactions. In this paper, we present an integrated Question Answering environment that combines a visual analytics tool for unstructured text and a state-of-the-art query expansion tool designed to compliment the cognitive processes associated with an information analysts work flow. Analysts are seldom looking for factoid answers to simple questions; their information needs are much more complex in that they may be interested in patterns of answers over time, conflicting information, and even related non-answer data may be critical to learning about a problem or reaching prudent conclusions. In our visual analytics tool, questions result in a comprehensive answer space that allows users to explore the variety within the answers and spot related information in the rest of the data. The exploratory nature of the dialog between the user and this system requires tailored evaluation methods that better address the evolving user goals and counter cognitive biases inherent to exploratory search tasks.

  4. SU-D-12A-02: DeTECT, a Method to Enhance Soft Tissue Contrast From Mega Voltage CT

    SciTech Connect (OSTI)

    Sheng, K; Gou, S; Qi, S

    2014-06-01

    Purpose: MVCT images have been used on TomoTherapy system to align patients based on bony anatomies but its usefulness for soft tissue registration, delineation and adaptive radiation therapy is severely limited due to minimal photoelectric interaction and prominent presence of noise resulting from low detector quantum efficiency of megavoltage x-rays. We aim to utilize a non-local means denoising method and texture analysis to recover the soft tissue information for MVCT. Methods: A block matching 3D (BM3D) algorithm was adapted to reduce the noise while keeping the texture information of the MVCT images. BM3D is an imaging denoising algorithm developed from non-local means methods. BM3D additionally creates 3D groups by stacking 2D patches by the order of similarity. 3D denoising operation is then performed. The resultant 3D group is inversely transformed back to 2D images. In this study, BM3D was applied to MVCT images of a CT quality phantom, a head and neck and a prostate patient. Following denoising, imaging texture was enhanced to create the denoised and texture enhanced CT (DeTECT). Results: The original MVCT images show prevalent noise and poor soft tissue contrast. By applying BM3D denoising and texture enhancement, all MVCT images show remarkable improvements. For the phantom, the contrast to noise ratio for the low contrast plug was improved from 2.2 to 13.1 without compromising line pair conspicuity. For the head and neck patient, the lymph nodes and vein in the carotid space inconspicuous in the original MVCT image becomes highly visible in DeTECT. For the prostate patient, the boundary between the bladder and the prostate in the original MVCT is successfully recovered. Both results are visually validated by kVCT images of the corresponding patients. Conclusion: DeTECT showed the promise to drastically improve the soft tissue contrast of MVCT for image guided radiotherapy and adaptive radiotherapy.

  5. Web-based Visual Analytics for Extreme Scale Climate Science

    SciTech Connect (OSTI)

    Steed, Chad A; Evans, Katherine J; Harney, John F; Jewell, Brian C; Shipman, Galen M; Smith, Brian E; Thornton, Peter E; Williams, Dean N.

    2014-01-01

    In this paper, we introduce a Web-based visual analytics framework for democratizing advanced visualization and analysis capabilities pertinent to large-scale earth system simulations. We address significant limitations of present climate data analysis tools such as tightly coupled dependencies, ineffi- cient data movements, complex user interfaces, and static visualizations. Our Web-based visual analytics framework removes critical barriers to the widespread accessibility and adoption of advanced scientific techniques. Using distributed connections to back-end diagnostics, we minimize data movements and leverage HPC platforms. We also mitigate system dependency issues by employing a RESTful interface. Our framework embraces the visual analytics paradigm via new visual navigation techniques for hierarchical parameter spaces, multi-scale representations, and interactive spatio-temporal data mining methods that retain details. Although generalizable to other science domains, the current work focuses on improving exploratory analysis of large-scale Community Land Model (CLM) and Community Atmosphere Model (CAM) simulations.

  6. Visualization of Fuel Cell Water Transport and Performance Characterization

    Office of Energy Efficiency and Renewable Energy (EERE) Indexed Site

    under Freezing Conditions | Department of Energy Visualization of Fuel Cell Water Transport and Performance Characterization under Freezing Conditions Visualization of Fuel Cell Water Transport and Performance Characterization under Freezing Conditions Part of a $100 million fuel cell award announced by DOE Secretary Bodman on Oct. 25, 2006. 2_rit.pdf (20.71 KB) More Documents & Publications Visualization of Fuel Cell Water Transport and Characterization under Freezing Conditions

  7. High-Performance Computing and Visualization | Energy Systems Integration |

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    NREL High-Performance Computing and Visualization High-performance computing (HPC) and visualization at NREL propel technology innovation as a research tool by which scientists and engineers find new ways to tackle our nation's energy challenges-challenges that cannot be addressed through traditional experimentation alone. Photo of two men standing in front of a 3D visualization screen These research efforts will save time and money and significantly improve the likelihood of breakthroughs

  8. Manipulating and Visualizing Proteins (Technical Report) | SciTech Connect

    Office of Scientific and Technical Information (OSTI)

    Technical Report: Manipulating and Visualizing Proteins Citation Details In-Document Search Title: Manipulating and Visualizing Proteins ProteinShop Gives Researchers a Hands-On Tool for Manipulating, Visualizing Protein Structures. The Human Genome Project and other biological research efforts are creating an avalanche of new data about the chemical makeup and genetic codes of living organisms. But in order to make sense of this raw data, researchers need software tools which let them explore

  9. Visualization of United States Energy Consumption | Open Energy...

    Open Energy Info (EERE)

    Energy Consumption Jump to: navigation, search Tool Summary LAUNCH TOOL Name: Visualization of United States Energy Consumption AgencyCompany Organization: Energy Information...

  10. VISMASHUP: streamlining the creation of custom visualization applications

    SciTech Connect (OSTI)

    Ahrens, James P; Santos, Emanuele; Lins, Lauro; Freire, Juliana; Silva, Cl'audio T

    2010-01-01

    Visualization is essential for understanding the increasing volumes of digital data. However, the process required to create insightful visualizations is involved and time consuming. Although several visualization tools are available, including tools with sophisticated visual interfaces, they are out of reach for users who have little or no knowledge of visualization techniques and/or who do not have programming expertise. In this paper, we propose VISMASHUP, a new framework for streamlining the creation of customized visualization applications. Because these applications can be customized for very specific tasks, they can hide much of the complexity in a visualization specification and make it easier for users to explore visualizations by manipulating a small set of parameters. We describe the framework and how it supports the various tasks a designer needs to carry out to develop an application, from mining and exploring a set of visualization specifications (pipelines), to the creation of simplified views of the pipelines, and the automatic generation of the application and its interface. We also describe the implementation of the system and demonstrate its use in two real application scenarios.

  11. The SDAV Software Frameworks for Visualization and Analysis on...

    Office of Scientific and Technical Information (OSTI)

    Software Frameworks for Visualization and Analysis on Next-Generation Multi-Core and Many-Core Architectures. Citation Details In-Document Search Title: The SDAV Software ...

  12. Capturing and Using Knowledge about the Use of Visualization Toolkits

    SciTech Connect (OSTI)

    Del Rio, Nicholas R.; Pinheiro da Silva, Paulo

    2012-11-02

    When constructing visualization pipelines using toolkits such as Visualization Toolkit (VTK) and Generic Mapping Tools (GMT), developers must understand (1) what toolkit operators will transform their data from its raw state to some required view state and (2) what viewers are available to present the generated view. Traditionally, developers learn about how to construct visualization pipelines by reading documentation and inspecting code examples, which can be costly in terms of the time and effort expended. Once an initial pipeline is constructed, developers may still have to undergo a trial and error process before a satisfactory visualization is generated. This paper presents the Visualization Knowledge Project (VisKo) that is built on a knowledge base of visualization toolkit operators and how they can be piped together to form visualization pipelines. Developers may now rely on VisKo to guide them when constructing visualization pipelines and in some cases, when VisKo has complete knowledge about some set of operators (i.e., sequencing and parameter settings), automatically generate a fully functional visualization pipeline.

  13. Visualizing Assembling Everything (2010 JGI/ANL HPC Workshop)

    ScienceCinema (OSTI)

    Jaffe, David; Gnerre, Sante

    2011-06-08

    David Jaffe and Sante Gnerre of the Broad Institute give a presentation on "Visualizing assembling everything" at the JGI/Argonne HPC Workshop on January 25, 2010.

  14. NREL: Distributed Grid Integration - Data Collection and Visualization...

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    District and the U.S. Army, to create data collection and visualization scenarios that help them to understand and effectively manage distributed energy integration systems. ...

  15. Visualization of Electric Power System Information: Workshop Proceedings

    SciTech Connect (OSTI)

    Kroposki, B.; Komomua, C.

    2013-01-01

    This report summarizes the workshop entitled: Visualization of Electric Power System Information. The workshop was held on September 11, 2012 on NREL's campus in Golden, Colorado.

  16. Visualization of World Energy Supply | Open Energy Information

    Open Energy Info (EERE)

    isualizationofWorldEnergySupply Cost: Free OpenEI Keyword(s): Community Generated Language: English References: OECD1 Motion chart visualization of the world energy supply...

  17. Carbon Smackdown: Visualizing Clean Energy (LBNL Summer Lecture...

    Office of Scientific and Technical Information (OSTI)

    use computer visualizations to accelerate climate research and discuss the development of next-generation clean energy technologies such as wind turbines and solar cells. ...

  18. Carbon Smackdown: Visualizing Clean Energy (LBNL Summer Lecture...

    Office of Scientific and Technical Information (OSTI)

    The final Carbon Smackdown match took place Aug. 9, 2010. Juan Meza of the Computational Research Division revealed how scientists use computer visualizations to accelerate climate ...

  19. Ocean Thermal Extractable Energy Visualization: Final Technical Report

    Office of Energy Efficiency and Renewable Energy (EERE)

    Report about the Ocean Thermal Extractable Energy Visualization project, which focuses on assessing the Maximum Practicably Extractable Energy from the world’s ocean thermal resources.

  20. Visualizing Wind Farm Wake Losses using SCADA Data

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Continuous Reliability Enhancement for Wind Visualizing Wind Farm Wake Losses using SCADA ... the Department of Energy's Continuous Reliability Enhancement for Wind (CREW) project. ...

  1. SBOL Visual: A Graphical Language for Genetic Designs

    DOE Public Access Gateway for Energy & Science Beta (PAGES Beta)

    Quinn, Jacqueline Y.; Cox, Robert Sidney; Adler, Aaron; Beal, Jacob; Bhatia, Swapnil; Cai, Yizhi; Chen, Joanna; Clancy, Kevin; Galdzicki, Michal; Hillson, Nathan J.; et al

    2015-12-03

    Synthetic Biology Open Language (SBOL) Visual is a graphical standard for genetic engineering. We report that it consists of symbols representing DNA subsequences, including regulatory elements and DNA assembly features. These symbols can be used to draw illustrations for communication and instruction, and as image assets for computer-aided design. SBOL Visual is a community standard, freely available for personal, academic, and commercial use (Creative Commons CC0 license). We provide prototypical symbol images that have been used in scientific publications and software tools. We encourage users to use and modify them freely, and to join the SBOL Visual community: http://www.sbolstandard.org/visual.

  2. A Novel Visualization Technique for Electric Power Grid Analytics

    SciTech Connect (OSTI)

    Wong, Pak C.; Schneider, Kevin P.; Mackey, Patrick S.; Foote, Harlan P.; Chin, George; Guttromson, Ross T.; Thomas, James J.

    2009-05-01

    The application of information visualization holds tremendous promise for the electric power industry, and yet its potential has not been sufficiently exploited by the visualization community. Prior work on visualizing electric power systems has been limited to depicting raw or processed information on top of a geographic layout. Little effort has been devoted to maximize the analytical strengths naturally gained by the visualization itself. This paper introduces a visualization system prototype, known as GreenGrid, that explores the planning and monitoring of the North American Electricity Infrastructure. For the purposes of visualization, the power infrastructure can be described as a network of nodes and links. The nodes represent the electrical buses where generators and loads are connected, while the links represent the transmission lines that interconnect the buses. This paper focuses mainly on a customized technique within GreenGrid that is designed to visually identify abnormal characteristics of the electricity infrastructure. In particular, we examine an extreme event that occurred within the Western United States power grid on August 10, 1996. We compare our study results with the conclusion of the post-disturbance analysis and find that many of the disturbance characteristics can be readily identified with the proper form of visualization. The paper includes a lessons learned discussion to evaluate the visualization application.

  3. Introduction to Reading and Visualizing ARM Data (Technical Report...

    Office of Scientific and Technical Information (OSTI)

    Introduction to Reading and Visualizing ARM Data Citation Details In-Document Search ... Country of Publication: United States Language: English Word Cloud More Like This Full ...

  4. Visualizing the Behavior of Polar Domains and Screening Charges...

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Visualizing the Behavior of Polar Domains and Screening Charges Under Electric and Mechanical Fields Event Sponsor: Mathematics and Computing Science - LANS Seminar Start Date: Sep...

  5. Visualization of Force Fields in Protein Structure Prediction...

    Office of Scientific and Technical Information (OSTI)

    WM KeckFoundation Country of Publication: United States Language: English Subject: 99 GENERAL AND MISCELLANEOUS molecular energy visualization protein structure prediction

  6. Analysis and visualization of global magnetospheric processes

    SciTech Connect (OSTI)

    Winske, D.; Mozer, F.S.; Roth, I.

    1998-12-31

    This is the final report of a three-year, Laboratory Directed Research and Development (LDRD) project at Los Alamos National Laboratory (LANL). The purpose of this project is to develop new computational and visualization tools to analyze particle dynamics in the Earth`s magnetosphere. These tools allow the construction of a global picture of particle fluxes, which requires only a small number of in situ spacecraft measurements as input parameters. The methods developed in this project have led to a better understanding of particle dynamics in the Earth`s magnetotail in the presence of turbulent wave fields. They have also been used to demonstrate how large electromagnetic pulses in the solar wind can interact with the magnetosphere to increase the population of energetic particles and even form new radiation belts.

  7. Spatio-temporal Visualization for Environmental Decision Support

    SciTech Connect (OSTI)

    Bhaduri, Budhendra L.; Shankar, Mallikarjun; Sorokine, Alexandre; Ganguly, Auroop R.

    2009-01-01

    Traditional visualization of earth surface features has been addressed through visual exploration, analysis, synthesis, and presentation of observable geospatial data. However, characterizing the changes in their observable and unobservable properties of geospatial features is critical for planning and policy formulation. Recent approaches are addressing modeling and visualization of the temporal dynamics that describe observed and/or predicted physical and socioeconomic processes using vast volumes of earth observation (imagery and other geophysical) data from remote sensor networks. This paper provides an overview of selected geospatial modeling and simulation, exploratory analysis of earth observation data, and high performance visualization research at Oak Ridge National Laboratory for developing novel data driven approaches for geospatial knowledge discovery and visualization relevant to environmental decision support.

  8. Hypervolume visualization: a challenge in simplicity

    SciTech Connect (OSTI)

    Bajaj, C.L.; Pascucci, V.; Rabbiolo, G.; Schikore, D.R.

    1998-09-22

    Hyper-volume visualization is designed to provide simple and fully explanatory images that give comprehensive insights into the global structure of scalar fields of any dimension. The basic idea is to have a dimension independent viewing system that scales nicely with the geometric dimension of the dataset and that can be combined with classical approaches like isocontouring and animation of slices of n.D data. We completely abandon (for core simplicity) rendering techniques, such as hidden surface removal or lighting or radiosity, that enhance three dimensional realism and concentrate on the real-time display of images that highlight structural (topological) features of the nD dataset (holes, tunnels, cavities, depressions, extrema, etc). Hyper-volume visualization on the one hand is a generalization of direct parallel projection methods in volume rendering. To achieve efficiency (and real-time performance on a graphics workstation) we combine the advantages of (i) a hierarchical representations of the hyper-volume data for multiresolution display and (ii) generalized object space splatting combined with texture-mapped graphics hardware acceleration. The development of a system that implements display techniques for multidimensional datasets requires careful design of both algorithms and user interfaces that scale linearly with the dimension n of the input geometric space. This is a major challenge since straightforward generalizations of standard techniques that are suitable for display of 3D data yield exceedingly intricate interfaces. For example, a view manipulation graphical user interface is usually based on a rotation of the object about Cartesian rotation axes, with possibly unit quaternions internal representations for the rotation group. Unfortunately the number of independent rotation axes grows quadratically with dimension(three in 3D to six in 4D to ten in 5D to fifteen in 6D space). Going back to the basics of parallel projections, we

  9. Theoretical crystallography with the Advanced Visualization System

    SciTech Connect (OSTI)

    Younkin, C.R.; Thornton, E.N.; Nicholas, J.B.; Jones, D.R.; Hess, A.C.

    1993-05-01

    Space is an Application Visualization System (AVS) graphics module designed for crystallographic and molecular research. The program can handle molecules, two-dimensional periodic systems, and three-dimensional periodic systems, all referred to in the paper as models. Using several methods, the user can select atoms, groups of atoms, or entire molecules. Selections can be moved, copied, deleted, and merged. An important feature of Space is the crystallography component. The program allows the user to generate the unit cell from the asymmetric unit, manipulate the unit cell, and replicate it in three dimensions. Space includes the Buerger reduction algorithm which determines the asymmetric unit and the space group of highest symmetry of an input unit cell. Space also allows the user to display planes in the lattice based on Miller indices, and to cleave the crystal to expose the surface. The user can display important precalculated volumetric data in Space, such as electron densities and electrostatic surfaces. With a variety of methods, Space can compute the electrostatic potential of any chemical system based on input point charges.

  10. Guided Text Search Using Adaptive Visual Analytics

    SciTech Connect (OSTI)

    Steed, Chad A; Symons, Christopher T; Senter, James K; DeNap, Frank A

    2012-10-01

    This research demonstrates the promise of augmenting interactive visualizations with semi- supervised machine learning techniques to improve the discovery of significant associations and insights in the search and analysis of textual information. More specifically, we have developed a system called Gryffin that hosts a unique collection of techniques that facilitate individualized investigative search pertaining to an ever-changing set of analytical questions over an indexed collection of open-source documents related to critical national infrastructure. The Gryffin client hosts dynamic displays of the search results via focus+context record listings, temporal timelines, term-frequency views, and multiple coordinate views. Furthermore, as the analyst interacts with the display, the interactions are recorded and used to label the search records. These labeled records are then used to drive semi-supervised machine learning algorithms that re-rank the unlabeled search records such that potentially relevant records are moved to the top of the record listing. Gryffin is described in the context of the daily tasks encountered at the US Department of Homeland Security s Fusion Center, with whom we are collaborating in its development. The resulting system is capable of addressing the analysts information overload that can be directly attributed to the deluge of information that must be addressed in the search and investigative analysis of textual information.

  11. Visual Outcome in Meningiomas Around Anterior Visual Pathways Treated With Linear Accelerator Fractionated Stereotactic Radiotherapy

    SciTech Connect (OSTI)

    Stiebel-Kalish, Hadas; Reich, Ehud; Gal, Lior; Rappaport, Zvi Harry; Nissim, Ouzi; Pfeffer, Raphael; Spiegelmann, Roberto

    2012-02-01

    Purpose: Meningiomas threatening the anterior visual pathways (AVPs) and not amenable for surgery are currently treated with multisession stereotactic radiotherapy. Stereotactic radiotherapy is available with a number of devices. The most ubiquitous include the gamma knife, CyberKnife, tomotherapy, and isocentric linear accelerator systems. The purpose of our study was to describe a case series of AVP meningiomas treated with linear accelerator fractionated stereotactic radiotherapy (FSRT) using the multiple, noncoplanar, dynamic conformal rotation paradigm and to compare the success and complication rates with those reported for other techniques. Patients and Methods: We included all patients with AVP meningiomas followed up at our neuro-ophthalmology unit for a minimum of 12 months after FSRT. We compared the details of the neuro-ophthalmologic examinations and tumor size before and after FSRT and at the end of follow-up. Results: Of 87 patients with AVP meningiomas, 17 had been referred for FSRT. Of the 17 patients, 16 completed >12 months of follow-up (mean 39). Of the 16 patients, 11 had undergone surgery before FSRT and 5 had undergone FSRT as first-line management. Tumor control was achieved in 14 of the 16 patients, with three meningiomas shrinking in size after RT. Two meningiomas progressed, one in an area that was outside the radiation field. The visual function had improved in 6 or stabilized in 8 of the 16 patients (88%) and worsened in 2 (12%). Conclusions: Linear accelerator fractionated RT using the multiple noncoplanar dynamic rotation conformal paradigm can be offered to patients with meningiomas that threaten the anterior visual pathways as an adjunct to surgery or as first-line treatment, with results comparable to those reported for other stereotactic RT techniques.

  12. Visual Analytics: Building a Vibrant and Resilient National Science

    SciTech Connect (OSTI)

    Wong, Pak C.; Thomas, James J.

    2009-09-20

    Five years after the science of visual analytics was formally established, we attempt to use two different studies to assess the current state of the community and evaluate the progress the community has made in the past few years. The first study involves a comparison analysis of intellectual and scholastic accomplishments recently made by the visual analytics community. The second one aims to measure the degree of community reach and internet penetration of visual-analytics-related resources. This paper describes our efforts to harvest the study data, conduct analysis, and make interpretations based on parallel comparisons with five other established computer science areas.

  13. Temporal-contrast measurements of a white-light-seeded noncollinear optical parametric amplifier

    DOE Public Access Gateway for Energy & Science Beta (PAGES Beta)

    Bromage, J.; Dorrer, C.; Zuegel, J. D.

    2015-09-01

    Ultra-intense optical parametric chirped-pulse systems require front ends with broad bandwidth and high temporal contrast. Temporal cross-correlation measurements of a white-light–seeded noncollinear optical parametric amplifier (NOPA) show that its prepulse contrast exceeds the 120 dB dynamic range of the broadband NOPA-based cross-correlator.

  14. Anisotropy Characterization of I-125 Seed with Attached Encapsulated Cobalt Chloride Complex Contrast Agent Markers for MRI-Based Prostate Brachytherapy

    SciTech Connect (OSTI)

    Frank, Steven J., E-mail: sjfrank@mdanderson.or [Department of Radiation Oncology, University of Texas M. D. Anderson Cancer Center, Houston, TX (United States); Tailor, Ramesh C.; Kudchadker, Rajat J. [Department of Radiation Physics, University of Texas M. D. Anderson Cancer Center, Houston, TX (United States); Martirosyan, Karen S. [Department of Chemical and Biomolecular Engineering, University of Houston, Houston, TX (United States); Stafford, R. Jason; Elliott, Andrew M. [Department of Imaging Physics, University of Texas M. D. Anderson Cancer Center, Houston, TX (United States); Swanson, David A. [Department of Urology, University of Texas M. D. Anderson Cancer Center, Houston, TX (United States); Sing, David; Choi, Jonathan [Department of Radiation Oncology, University of Texas M. D. Anderson Cancer Center, Houston, TX (United States); Mourtada, Firas; Ibbott, Geoffrey S. [Department of Radiation Physics, University of Texas M. D. Anderson Cancer Center, Houston, TX (United States)

    2011-07-01

    We have developed a novel MRI marker for prostate brachytherapy. The purpose of this study was to evaluate the changes in anisotropy when cobalt chloride complex contrast agent encapsulated contrast agent markers (C4-ECAM) were placed adjacent to an iodine-125 (I-125) titanium seed, and to verify that the C4-ECAMs were visible on magnetic resonance imaging (MRI) after radiation exposure. Two C4-ECAMs were verified to be MRI visible in a phantom before radiation exposure. The C4-ECAMs were then attached to each end of a 12.7-U (10-mCi) I-125 titanium seed in a polymer tube. Anisotropy was measured and analyzed with the seed alone and with attached C4-ECAMs by suspending thermoluminescent dosimeters in a water phantom in 2 circles surrounding the radioactive source with radius of 1 or 2 cm. A T1-weighted MRI evaluation of C4-ECAMs was then performed after exposure to the amount of radiation typically delivered during 1 month of prostate brachytherapy. Measured values of the anisotropy function F(r, {theta}) for the I-125 seed with and without the C4-ECAMs were mutually statistically indistinguishable (standard error of the mean <4.2%) and agreed well with published TG-43 values for the bare seed. As expected, the anisotropy function {phi}{sub an}(r) for the 2 datasets (with and without C4-ECAMs) derived from the measured F(r, {theta}) did not exhibit statistically measurable difference. Both datasets showed agreement with the published TG-43 {phi}{sub an}(r) for the bare seed. The C4-ECAMs were well visualized by MRI after 1 month of radiation exposure. There were no changes in anisotropy when the C4-ECAMs were placed next to an I-125 radioactive seed, and the C4-ECAMs were visualized after radiation exposure.

  15. Effects of Field of View and Visual Complexity on Virtual Reality Training Effectiveness for a Visual Scanning Task

    DOE Public Access Gateway for Energy & Science Beta (PAGES Beta)

    Ragan, Eric D.; Bowman, Doug A.; Kopper, Regis; Stinson, Cheryl; Scerbo, Siroberto; McMahan, Ryan P.

    2015-02-13

    Virtual reality training systems are commonly used in a variety of domains, and it is important to understand how the realism of a training simulation influences training effectiveness. The paper presents a framework for evaluating the effects of virtual reality fidelity based on an analysis of a simulation’s display, interaction, and scenario components. Following this framework, we conducted a controlled experiment to test the effects of fidelity on training effectiveness for a visual scanning task. The experiment varied the levels of field of view and visual realism during a training phase and then evaluated scanning performance with the simulator’s highestmore » level of fidelity. To assess scanning performance, we measured target detection and adherence to a prescribed strategy. The results show that both field of view and visual realism significantly affected target detection during training; higher field of view led to better performance and higher visual realism worsened performance. Additionally, the level of visual realism during training significantly affected learning of the prescribed visual scanning strategy, providing evidence that high visual realism was important for learning the technique. The results also demonstrate that task performance during training was not always a sufficient measure of mastery of an instructed technique. That is, if learning a prescribed strategy or skill is the goal of a training exercise, performance in a simulation may not be an appropriate indicator of effectiveness outside of training—evaluation in a more realistic setting may be necessary.« less

  16. VisPortal: Deploying grid-enabled visualization tools through...

    Office of Scientific and Technical Information (OSTI)

    tools through a web-portal interface Citation Details In-Document Search Title: VisPortal: Deploying grid-enabled visualization tools through a web-portal interface You ...

  17. VisPortal: Deploying grid-enabled visualization tools through...

    Office of Scientific and Technical Information (OSTI)

    tools through a web-portal interface Citation Details In-Document Search Title: VisPortal: Deploying grid-enabled visualization tools through a web-portal interface The ...

  18. SciDAC Visualization and Analytics Center for Enabling Technologies

    SciTech Connect (OSTI)

    Joy, Kenneth I.

    2014-09-14

    This project focuses on leveraging scientific visualization and analytics software technology as an enabling technology for increasing scientific productivity and insight. Advances in computational technology have resulted in an "information big bang," which in turn has created a significant data understanding challenge. This challenge is widely acknowledged to be one of the primary bottlenecks in contemporary science. The vision for our Center is to respond directly to that challenge by adapting, extending, creating when necessary and deploying visualization and data understanding technologies for our science stakeholders. Using an organizational model as a Visualization and Analytics Center for Enabling Technologies (VACET), we are well positioned to be responsive to the needs of a diverse set of scientific stakeholders in a coordinated fashion using a range of visualization, mathematics, statistics, computer and computational science and data management technologies.

  19. Simulation and visualization of attosecond stimulated x-ray Raman...

    Office of Scientific and Technical Information (OSTI)

    Simulation and visualization of attosecond stimulated x-ray Raman spectroscopy signals in trans-N-methylacetamide at the nitrogen and oxygen K-edges Citation Details In-Document ...

  20. Topology-based Visualization and Analysis of High-dimensional...

    Office of Scientific and Technical Information (OSTI)

    Topology-based Visualization and Analysis of High-dimensional Data and Time-varying Data at the Extreme Scale Citation Details In-Document Search Title: Topology-based ...

  1. Eliot Feibush leads new Princeton consortium to visualize Big...

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Eliot Feibush leads new Princeton consortium to visualize Big Data By John Greenwald April 22, 2015 Tweet Widget Google Plus One Share on Facebook Eliot Feibush (Photo by Elle ...

  2. Eliot Feibush leads new Princeton consortium to visualize Big...

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Eliot Feibush leads new Princeton consortium to visualize Big Data By John Greenwald April 20, 2015 Tweet Widget Google Plus One Share on Facebook Eliot Feibush (Photo by Elle ...

  3. Visualization of Fuel Cell Water Transport and Characterization under

    Office of Energy Efficiency and Renewable Energy (EERE) Indexed Site

    Freezing Conditions | Department of Energy Visualization of Fuel Cell Water Transport and Characterization under Freezing Conditions Visualization of Fuel Cell Water Transport and Characterization under Freezing Conditions This presentation, which focuses on fuel cell water transport, was given by Satish Kandlikar at a DOE fuel cell meeting in February 2007. new_fc_kandlikar_rit.pdf (1.18 MB) More Documents & Publications Water Transport Exploratory Studies Fundamental Issues in Subzero

  4. VERDE: Visualizing Energy Resources Dynamically on Earth - Energy

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Innovation Portal Energy Analysis Energy Analysis Electricity Transmission Electricity Transmission Find More Like This Return to Search VERDE: Visualizing Energy Resources Dynamically on Earth Oak Ridge National Laboratory Contact ORNL About This Technology Technology Marketing SummaryVERDE is a software application utilizing the Google Earth(c) platform to provide real time visualization of the electric power grid.DescriptionVERDE is capable of layering different types of information on

  5. Visual Information for the Desktop, version 1.0

    Energy Science and Technology Software Center (OSTI)

    2006-03-29

    VZIN integrates visual analytics capabilities into popular desktop tools to aid a user in searching and understanding an information space. VZIN allows users to Drag-Drop-Visualize-Explore-Organize information within tools such as Microsoft Office, Windows Explorer, Excel, and Outlook. VZIN is tailorable to specific client or industry requirements. VZIN follows the desktop metaphors so that advanced analytical capabilities are available with minimal user training.

  6. Quantification and Visualization of Variation in Anatomical Trees

    SciTech Connect (OSTI)

    Amenta, Nina; Datar, Manasi; Dirksen, Asger; de Bruihne, Marleen; Feragen, Aasa; Ge, Xiaoyin; Holst Pedersen, Jesper; Howard, Marylesa; Owen, Megan; Petersen, Jens; Shi, Jie; Xu, Qiuping

    2015-07-01

    This paper presents two approaches to quantifying and visualizing variation in datasets of trees. The first approach localizes subtrees in which significant population differences are found through hypothesis testing and sparse classifiers on subtree features. The second approach visualizes the global metric structure of datasets through low-distortion embedding into hyperbolic planes in the style of multidimensional scaling. A case study is made on a dataset of airway trees in relation to Chronic Obstructive Pulmonary Disease.

  7. John Papanikolas: Visualizing Charge Carrier Motion in Nanowires Using

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Femtosecond Pump-Probe Microscopy | Center for Energy Efficient Materials John Papanikolas: Visualizing Charge Carrier Motion in Nanowires Using Femtosecond Pump-Probe Microscopy Apr 17, 2014 | 4:00 PM - 5:00 PM John Papanikolas Professor of Chemistry & Deputy Director, EFRC on Solar Fuels University of North Carolina, Chapel Hill Visualizing Charge Carrier Motion in Nanowires Using Femtosecond Pump-Probe Microscopy April 17, 2014 | 4:00pm | ESB 1001 Faculty host: Dan Morse

  8. Appendix TFIELD Attachment A: Attachment A: TFIELD-2014 Visualization

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Attachment A: TFIELD-2014 Visualization United States Department of Energy Waste Isolation Pilot Plant Carlsbad Field Office Carlsbad, New Mexico Compliance Recertification Application 2014 Attachment A: TFIELD-2014 Visualization This attachment contains figures for Appendix TFIELD-2014, related to the Culebra T-Field calibration process, performed as part of the 2009 Compliance Recertification Application (CRA-2009) Performance Assessment Baseline Calculation (PABC). These parameter inputs and

  9. PROJECT PROFILE: Visualization and Analytics of Distribution Systems with

    Office of Energy Efficiency and Renewable Energy (EERE) Indexed Site

    Deep Penetration of Distributed Energy Resources (SuNLaMP) | Department of Energy Visualization and Analytics of Distribution Systems with Deep Penetration of Distributed Energy Resources (SuNLaMP) PROJECT PROFILE: Visualization and Analytics of Distribution Systems with Deep Penetration of Distributed Energy Resources (SuNLaMP) Funding Program: SuNLaMP SunShot Subprogram: Systems Integration Location: SLAC National Accelerator Laboratory, Menlo Park, CA SunShot Award Amount: $4,000,000

  10. Large Data Visualization on Distributed Memory Mulit-GPU Clusters

    SciTech Connect (OSTI)

    Childs, Henry R.

    2010-03-01

    Data sets of immense size are regularly generated on large scale computing resources. Even among more traditional methods for acquisition of volume data, such as MRI and CT scanners, data which is too large to be effectively visualization on standard workstations is now commonplace. One solution to this problem is to employ a 'visualization cluster,' a small to medium scale cluster dedicated to performing visualization and analysis of massive data sets generated on larger scale supercomputers. These clusters are designed to fit a different need than traditional supercomputers, and therefore their design mandates different hardware choices, such as increased memory, and more recently, graphics processing units (GPUs). While there has been much previous work on distributed memory visualization as well as GPU visualization, there is a relative dearth of algorithms which effectively use GPUs at a large scale in a distributed memory environment. In this work, we study a common visualization technique in a GPU-accelerated, distributed memory setting, and present performance characteristics when scaling to extremely large data sets.

  11. The Ultra-scale Visualization Climate Data Analysis Tools (UV-CDAT): Data Analysis and Visualization for Geoscience Data

    SciTech Connect (OSTI)

    Williams, Dean; Doutriaux, Charles; Patchett, John; Williams, Sean; Shipman, Galen; Miller, Ross; Steed, Chad; Krishnan, Harinarayan; Silva, Claudio; Chaudhary, Aashish; Bremer, Peer-Timo; Pugmire, David; Bethel, E. Wes; Childs, Hank; Prabhat, Mr.; Geveci, Berk; Bauer, Andrew; Pletzer, Alexander; Poco, Jorge; Ellqvist, Tommy; Santos, Emanuele; Potter, Gerald; Smith, Brian; Maxwell, Thomas; Kindig, David; Koop, David

    2013-05-01

    To support interactive visualization and analysis of complex, large-scale climate data sets, UV-CDAT integrates a powerful set of scientific computing libraries and applications to foster more efficient knowledge discovery. Connected through a provenance framework, the UV-CDAT components can be loosely coupled for fast integration or tightly coupled for greater functionality and communication with other components. This framework addresses many challenges in the interactive visual analysis of distributed large-scale data for the climate community.

  12. A report documenting the completion of the Los Alamos National Laboratory portion of the ASC level II milestone ""Visualization on the supercomputing platform

    SciTech Connect (OSTI)

    Ahrens, James P; Patchett, John M; Lo, Li - Ta; Mitchell, Christopher; Mr Marle, David; Brownlee, Carson

    2011-01-24

    This report provides documentation for the completion of the Los Alamos portion of the ASC Level II 'Visualization on the Supercomputing Platform' milestone. This ASC Level II milestone is a joint milestone between Sandia National Laboratory and Los Alamos National Laboratory. The milestone text is shown in Figure 1 with the Los Alamos portions highlighted in boldfaced text. Visualization and analysis of petascale data is limited by several factors which must be addressed as ACES delivers the Cielo platform. Two primary difficulties are: (1) Performance of interactive rendering, which is the most computationally intensive portion of the visualization process. For terascale platforms, commodity clusters with graphics processors (GPUs) have been used for interactive rendering. For petascale platforms, visualization and rendering may be able to run efficiently on the supercomputer platform itself. (2) I/O bandwidth, which limits how much information can be written to disk. If we simply analyze the sparse information that is saved to disk we miss the opportunity to analyze the rich information produced every timestep by the simulation. For the first issue, we are pursuing in-situ analysis, in which simulations are coupled directly with analysis libraries at runtime. This milestone will evaluate the visualization and rendering performance of current and next generation supercomputers in contrast to GPU-based visualization clusters, and evaluate the perfromance of common analysis libraries coupled with the simulation that analyze and write data to disk during a running simulation. This milestone will explore, evaluate and advance the maturity level of these technologies and their applicability to problems of interest to the ASC program. In conclusion, we improved CPU-based rendering performance by a a factor of 2-10 times on our tests. In addition, we evaluated CPU and CPU-based rendering performance. We encourage production visualization experts to consider using CPU

  13. Contrasting Behavior of GaP(001) and InP(001) at the Interface...

    Office of Scientific and Technical Information (OSTI)

    at the Interface with Water Citation Details In-Document Search Title: Contrasting Behavior of GaP(001) and InP(001) at the Interface with Water Authors: Wood, B C ; ...

  14. QUIET-SUN INTENSITY CONTRASTS IN THE NEAR-ULTRAVIOLET AS MEASURED FROM SUNRISE

    SciTech Connect (OSTI)

    Hirzberger, J.; Feller, A.; Riethmueller, T. L.; Schuessler, M.; Borrero, J. M.; Gandorfer, A.; Solanki, S. K.; Barthol, P.; Afram, N.; Unruh, Y. C.; Berdyugina, S. V.; Berkefeld, T.; Schmidt, W.; Bonet, J. A.; MartInez Pillet, V.; Knoelker, M.; Title, A. M.

    2010-11-10

    We present high-resolution images of the Sun in the near-ultraviolet spectral range between 214 nm and 397 nm as obtained from the first science flight of the 1 m SUNRISE balloon-borne solar telescope. The quiet-Sun rms intensity contrasts found in this wavelength range are among the highest values ever obtained for quiet-Sun solar surface structures-up to 32.8% at a wavelength of 214 nm. We compare the rms contrasts obtained from the observational data with theoretical intensity contrasts obtained from numerical magnetohydrodynamic simulations. For 388 nm and 312 nm the observations agree well with the numerical simulations whereas at shorter wavelengths discrepancies between observed and simulated contrasts remain.

  15. Hydrogen atom donor compounds as contrast enhancers for black-and-white photothermographic and thermographic elements

    DOE Patents [OSTI]

    Harring, Lori S.; Simpson, Sharon M.; Sansbury, Francis H.

    1997-01-01

    Hydrogen atom donor compounds are useful as contrast enhancers when used in combination with (i) hindered phenol developers, and (ii) trityl hydrazide and/or formyl-phenyl hydrazine co-developers, to produce ultra-high contrast black-and-white photothermographic and thermographic elements. The photothermographic and thermographic elements may be used as a photomask in a process where there is a subsequent exposure of an ultraviolet or short wavelength visible radiation-sensitive imageable medium.

  16. Image segmentation of nanoscale Zernike phase contrast X-ray computed tomography images

    SciTech Connect (OSTI)

    Kumar, Arjun S.; Mandal, Pratiti; Zhang, Yongjie; Litster, Shawn

    2015-05-14

    Zernike phase contrast is a useful technique for nanoscale X-ray computed tomography (CT) imaging of materials with a low X-ray absorption coefficient. It enhances the image contrast by phase shifting X-ray waves to create changes in amplitude. However, it creates artifacts that hinder the use of traditional image segmentation techniques. We propose an image restoration method that models the X-ray phase contrast optics and the three-dimensional image reconstruction method. We generate artifact-free images through an optimization problem that inverts this model. Though similar approaches have been used for Zernike phase contrast in visible light microscopy, this optimization employs an effective edge detection method tailored to handle Zernike phase contrast artifacts. We characterize this optics-based restoration method by removing the artifacts in and thresholding multiple Zernike phase contrast X-ray CT images to produce segmented results that are consistent with the physical specimens. We quantitatively evaluate and compare our method to other segmentation techniques to demonstrate its high accuracy.

  17. Visual Data Analysis as an Integral Part of Environmental Management

    SciTech Connect (OSTI)

    Meyer, Joerg; Bethel, E. Wes; Horsman, Jennifer L.; Hubbard, Susan S.; Krishnan, Harinarayan; Romosan,, Alexandru; Keating, Elizabeth H.; Monroe, Laura; Strelitz, Richard; Moore, Phil; Taylor, Glenn; Torkian, Ben; Johnson, Timothy C.; Gorton, Ian

    2012-10-01

    The U.S. Department of Energy's (DOE) Office of Environmental Management (DOE/EM) currently supports an effort to understand and predict the fate of nuclear contaminants and their transport in natural and engineered systems. Geologists, hydrologists, physicists and computer scientists are working together to create models of existing nuclear waste sites, to simulate their behavior and to extrapolate it into the future. We use visualization as an integral part in each step of this process. In the first step, visualization is used to verify model setup and to estimate critical parameters. High-performance computing simulations of contaminant transport produces massive amounts of data, which is then analyzed using visualization software specifically designed for parallel processing of large amounts of structured and unstructured data. Finally, simulation results are validated by comparing simulation results to measured current and historical field data. We describe in this article how visual analysis is used as an integral part of the decision-making process in the planning of ongoing and future treatment options for the contaminated nuclear waste sites. Lessons learned from visually analyzing our large-scale simulation runs will also have an impact on deciding on treatment measures for other contaminated sites.

  18. Visualizations of coherent center domains in local Polyakov loops

    SciTech Connect (OSTI)

    Stokes, Finn M. Kamleh, Waseem; Leinweber, Derek B.

    2014-09-15

    Quantum Chromodynamics exhibits a hadronic confined phase at low to moderate temperatures and, at a critical temperature T{sub C}, undergoes a transition to a deconfined phase known as the quarkgluon plasma. The nature of this deconfinement phase transition is probed through visualizations of the Polyakov loop, a gauge independent order parameter. We produce visualizations that provide novel insights into the structure and evolution of center clusters. Using the HMC algorithm the percolation during the deconfinement transition is observed. Using 3D rendering of the phase and magnitude of the Polyakov loop, the fractal structure and correlations are examined. The evolution of the center clusters as the gauge fields thermalize from below the critical temperature to above it are also exposed. We observe deconfinement proceeding through a competition for the dominance of a particular center phase. We use stout-link smearing to remove small-scale noise in order to observe the large-scale evolution of the center clusters. A correlation between the magnitude of the Polyakov loop and the proximity of its phase to one of the center phases of SU(3) is evident in the visualizations. - Highlights: We produce visualizations of center clusters in Polyakov loops. The evolution of center clusters with HMC simulation time is examined. Visualizations provide novel insights into the percolation of center clusters. The magnitude and phase of the Polyakov loop are studied. A correlation between the magnitude and center phase proximity is evident.

  19. Report of improved performance in Talbot–Lau phase-contrast computed tomography

    SciTech Connect (OSTI)

    Weber, Thomas Pelzer, Georg; Rieger, Jens; Ritter, André; Anton, Gisela

    2015-06-15

    Purpose: Many expectations have been raised since the use of conventional x-ray tubes on grating-based x-ray phase-contrast imaging. Despite a reported increase in contrast-to-noise ratio (CNR) in many publications, there is doubt on whether phase-contrast computed tomography (CT) is advantageous in clinical CT scanners in vivo. The aim of this paper is to contribute to this discussion by analyzing the performance of a phase-contrast CT laboratory setup. Methods: A phase-contrast CT performance analysis was done. Projection images of a phantom were recorded, and image slices were reconstructed using standard filtered back projection methods. The resulting image slices were analyzed by determining the CNRs in the attenuation and phase image. These results were compared to analytically calculated expectations according to the already published phase-contrast CT performance analysis by Raupach and Flohr [Med. Phys. 39, 4761–4774 (2012)]. There, a severe mistake was found leading to wrong predictions of the performance of phase-contrast CT. The error was corrected and with the new formulae, the experimentally obtained results matched the analytical calculations. Results: The squared ratios of the phase-contrast CNR and the attenuation CNR obtained in the authors’ experiment are five- to ten-fold higher than predicted by Raupach and Flohr [Med. Phys. 39, 4761–4774 (2012)]. The effective lateral spatial coherence length deduced outnumbers the already optimistic assumption of Raupach and Flohr [Med. Phys. 39, 4761–4774 (2012)] by a factor of 3. Conclusions: The authors’ results indicate that the assumptions made in former performance analyses are pessimistic. The break-even point, when phase-contrast CT outperforms attenuation CT, is within reach even with realistic, nonperfect gratings. Further improvements to state-of-the-art clinical CT scanners, like increasing the spatial resolution, could change the balance in favor of phase-contrast computed tomography

  20. Visual Data Analysis as an Integral Part of Environmental Management

    SciTech Connect (OSTI)

    Meyer, Joerg; Bethel, E. Wes; Horsman, Jennifer L.; Hubbard, Susan S.; Krishnan, Hari; Romosan, Alex; Keating, Elizabeth; Monroe, Laura M.; Strelitz, Richard; Moore, Philip; Taylor, Glenn; Torkian, Ben; Johnson, Timothy C.; Gorton, Ian

    2012-12-01

    The U.S. Department of Energy's (DOE) Office of Environmental Management (DOE/EM) currently supports an effort to understand and predict contaminant fate and transport in natural and engineered systems. Geologists, hydrologists, physicists and computer scientists are working together to create models of existing contaminated sites and to simulate their behavior. Simulation results are verified based on historical data and extrapolated into the future. Visualization is used for model setup verification, visual analysis of high-performance computing simulation results, and uncertainty quantification. This article describes the challenges and solutions for visual data analysis, which impacts the decision-making process for each of the contaminated sites. Lessons learned from these simulations will also have an impact on deciding on treatment measures for other, similarly contaminated areas, including those affected by more recent events, such as Chernobyl and Fukushima.

  1. High Performance Multivariate Visual Data Exploration for Extremely Large Data

    SciTech Connect (OSTI)

    Rubel, Oliver; Wu, Kesheng; Childs, Hank; Meredith, Jeremy; Geddes, Cameron G.R.; Cormier-Michel, Estelle; Ahern, Sean; Weber, Gunther H.; Messmer, Peter; Hagen, Hans; Hamann, Bernd; Bethel, E. Wes; Prabhat,

    2008-08-22

    One of the central challenges in modern science is the need to quickly derive knowledge and understanding from large, complex collections of data. We present a new approach that deals with this challenge by combining and extending techniques from high performance visual data analysis and scientific data management. This approach is demonstrated within the context of gaining insight from complex, time-varying datasets produced by a laser wakefield accelerator simulation. Our approach leverages histogram-based parallel coordinates for both visual information display as well as a vehicle for guiding a data mining operation. Data extraction and subsetting are implemented with state-of-the-art index/query technology. This approach, while applied here to accelerator science, is generally applicable to a broad set of science applications, and is implemented in a production-quality visual data analysis infrastructure. We conduct a detailed performance analysis and demonstrate good scalability on a distributed memory Cray XT4 system.

  2. Beam collimation with polycapillary x-ray optics for high contrast high resolution monochromatic imaging

    SciTech Connect (OSTI)

    Sugiro, Francisca R.; Li Danhong; MacDonald, C.A.

    2004-12-01

    Monochromatic imaging can provide better contrast and resolution than conventional broadband radiography. In broadband systems, low energy photons do not contribute to the image, but are merely absorbed, while high energy photons produce scattering that degrades the image. By tuning to the optimal energy, one can eliminate undesirable lower and higher energies. Monochromatization is achieved by diffraction from a single crystal. A crystal oriented to diffract at a particular energy, in this case the characteristic line energy, diffracts only those photons within a narrow range of angles. The resultant beam from a divergent source is nearly parallel, but not very intense. To increase the intensity, collimation was performed with polycapillary x-ray optics, which can collect radiation from a divergent source and redirect it into a quasi parallel beam. Contrast and resolution measurements were performed with diffracting crystals with both high and low angular acceptance. Testing was first done at 8 keV with an intense copper rotating anode x-ray source, then 17.5 keV measurements were made with a low power molybdenum source. At 8 keV, subject contrast was a factor of five higher than for the polychromatic case. At 17.5 keV, monochromatic contrast was two times greater than the conventional polychromatic contrast. The subject contrasts measured at both energies were in good agreement with theory. An additional factor of two increase in contrast, for a total gain of four, is expected at 17.5 keV from the removal of scatter. Scatter might be simply removed using an air gap, which does not degrade resolution with a parallel beam.

  3. Interactive visualization of particle beams for accelerator design

    SciTech Connect (OSTI)

    Wilson, Brett; Ma, Kwan-Liu; Qiang, Ji; Ryne, Robert

    2002-01-15

    We describe a hybrid data-representation and rendering technique for visualizing large-scale particle data generated from numerical modeling of beam dynamics. The basis of the technique is mixing volume rendering and point rendering according to particle density distribution, visibility, and the user's instruction. A hierarchical representation of the data is created on a parallel computer, allowing real-time partitioning into high-density areas for volume rendering, and low-density areas for point rendering. This allows the beam to be interactively visualized while preserving the fine structure usually visible only with slow point based rendering techniques.

  4. The CommonGround Visual Paradigm for Biosurveillance

    SciTech Connect (OSTI)

    Livnat, Yarden; Jurrus, Elizabeth R.; Gundlapalli, Adi V.; Gestland, Per

    2013-06-14

    Biosurveillance is a critical area in the intelligence community for real-time detection of disease outbreaks. Identifying epidemics enables analysts to detect and monitor disease outbreaks that might be spread from natural causes or from possible biological warfare attacks. Containing these events and disseminating alerts requires the ability to rapidly find, classify and track harmful biological signatures. In this paper, we describe a novel visual paradigm to conduct biosurveillance using an Infectious Disease Weather Map. Our system provides a visual common ground in which users can view, explore and discover emerging concepts and correlations such as symptoms, syndromes, pathogens, and geographic locations.

  5. Visualizing Value: Game-Changing Solar Technologies for Homeowners |

    Office of Energy Efficiency and Renewable Energy (EERE) Indexed Site

    Department of Energy Visualizing Value: Game-Changing Solar Technologies for Homeowners Visualizing Value: Game-Changing Solar Technologies for Homeowners July 29, 2016 - 10:00am Addthis Sistine Solar’s completed SolarSkin installation on a Katahdin log cabin. The company’s SolarSkin panels seamlessly blend in with the cabin’s green roof. | Photo Courtesy of Sistine Solar Sistine Solar's completed SolarSkin installation on a Katahdin log cabin. The company's SolarSkin panels

  6. Your Data Analysis & Visualization Needs Mira Performance Boot Camp

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Mira Performance Boot Camp May 20, 2015 Joseph A. Insley Tukey- High Performance Visualization Cluster ¤ 96 AMD Dual Opteron 6128 Compute Nodes ¥ 16 total CPU cores per node ¥ 64 GB RAM ¥ 2 NVIDIA Tesla M2070 GPUs, 6 GB RAM each ¤ 6 terabytes of CPU RAM, 1.1 terabytes of GPU RAM ¤ Peak GPU Performance: Over 98 TeraFLOPS ¤ Cross-Mounted Filesystem with Mira 2 Cooley - Expected June production ¤ Analytics/Visualization cluster ¤ Peak 223 TF ¤ 126 nodes; each

  7. Phase-contrast Hounsfield units of fixated and non-fixated soft-tissue samples

    SciTech Connect (OSTI)

    Willner, Marian; Fior, Gabriel; Marschner, Mathias; Birnbacher, Lorenz; Schock, Jonathan; Braun, Christian; Fingerle, Alexander A.; Noël, Peter B.; Rummeny, Ernst J.; Pfeiffer, Franz; Herzen, Julia; Rozhkova, Elena A.

    2015-08-31

    X-ray phase-contrast imaging is a novel technology that achieves high soft-tissue contrast. Although its clinical impact is still under investigation, the technique may potentially improve clinical diagnostics. In conventional attenuation-based X-ray computed tomography, radiological diagnostics are quantified by Hounsfield units. Corresponding Hounsfield units for phase-contrast imaging have been recently introduced, enabling a setup-independent comparison and standardized interpretation of imaging results. Thus far, the experimental values of few tissue types have been reported; these values have been determined from fixated tissue samples. This study presents phase-contrast Hounsfield units for various types of non-fixated human soft tissues. A large variety of tissue specimens ranging from adipose, muscle and connective tissues to liver, kidney and pancreas tissues were imaged by a grating interferometer with a rotating-anode X-ray tube and a photon-counting detector. In addition, we investigated the effects of formalin fixation on the quantitative phase-contrast imaging results.

  8. Phase-contrast Hounsfield units of fixated and non-fixated soft-tissue samples

    DOE Public Access Gateway for Energy & Science Beta (PAGES Beta)

    Willner, Marian; Fior, Gabriel; Marschner, Mathias; Birnbacher, Lorenz; Schock, Jonathan; Braun, Christian; Fingerle, Alexander A.; Noël, Peter B.; Rummeny, Ernst J.; Pfeiffer, Franz; et al

    2015-08-31

    X-ray phase-contrast imaging is a novel technology that achieves high soft-tissue contrast. Although its clinical impact is still under investigation, the technique may potentially improve clinical diagnostics. In conventional attenuation-based X-ray computed tomography, radiological diagnostics are quantified by Hounsfield units. Corresponding Hounsfield units for phase-contrast imaging have been recently introduced, enabling a setup-independent comparison and standardized interpretation of imaging results. Thus far, the experimental values of few tissue types have been reported; these values have been determined from fixated tissue samples. This study presents phase-contrast Hounsfield units for various types of non-fixated human soft tissues. A large variety of tissuemore » specimens ranging from adipose, muscle and connective tissues to liver, kidney and pancreas tissues were imaged by a grating interferometer with a rotating-anode X-ray tube and a photon-counting detector. In addition, we investigated the effects of formalin fixation on the quantitative phase-contrast imaging results.« less

  9. High-Resolution Phase-Contrast Imaging of Submicron Particles in Unstained Lung Tissue

    SciTech Connect (OSTI)

    Schittny, J. C.; Barre, S. F.; Haberthuer, D.; Mokso, R.; Tsuda, A.; Stampanoni, M.

    2011-09-09

    To access the risks and chances of deposition of submicron particles in the gas-exchange area of the lung, a precise three-dimensional (3D)-localization of the sites of deposition is essential--especially because local peaks of deposition are expected in the acinar tree and in individual alveoli. In this study we developed the workflow for such an investigation. We administered 200-nm gold particles to young adult rats by intratracheal instillation. After fixation and paraffin embedding, their lungs were imaged unstained using synchrotron radiation x-ray tomographic microscopy (SRXTM) at the beamline TOMCAT (Swiss Light Source, Villigen, Switzerland) at sample detector distances of 2.5 mm (absorption contrast) and of 52.5 mm (phase contrast). A segmentation based on a global threshold of grey levels was successfully done on absorption-contrast images for the gold and on the phase-contrast images for the tissue. The smallest spots containing gold possessed a size of 1-2 voxels of 370-nm side length. We conclude that a combination of phase and absorption contrast SRXTM imaging is necessary to obtain the correct segmentation of both tissue and gold particles. This method will be used for the 3D localization of deposited particles in the gas-exchange area of the lung.

  10. Nonlinear contrast enhancement in photoacoustic molecular imaging with gold nanosphere encapsulated nanoemulsions

    SciTech Connect (OSTI)

    Wei, Chen-wei; Lombardo, Michael; Larson-Smith, Kjersta; Perez, Camilo; Xia, Jinjun; Matula, Thomas; Pozzo, Danilo; O'Donnell, Matthew; Pelivanov, Ivan

    2014-01-20

    A composite contrast agent, a nanoemulsion bead with assembled gold nanospheres at the interface, is proposed to improve the specific contrast of photoacoustic molecular imaging. A phase transition in the bead's core is induced by absorption of a nanosecond laser pulse with a fairly low laser fluence (∼3.5 mJ/cm{sup 2}), creating a transient microbubble through dramatically enhanced thermal expansion. This generates nonlinear photoacoustic signals with more than 10 times larger amplitude compared to that of a linear agent with the same optical absorption. By applying a differential scheme similar to ultrasound pulse inversion, more than 40 dB contrast enhancement is demonstrated with suppression of background signals.

  11. Lighting Studies for Fuelling Machine Deployed Visual Inspection Tool

    SciTech Connect (OSTI)

    Stoots, Carl; Griffith, George

    2015-04-01

    Under subcontract to James Fisher Nuclear, Ltd., INL has been reviewing advanced vision systems for inspection of graphite in high radiation, high temperature, and high pressure environments. INL has performed calculations and proof-of-principle measurements of optics and lighting techniques to be considered for visual inspection of graphite fuel channels in AGR reactors in UK.

  12. Human Factors Evaluation of Advanced Electric Power Grid Visualization Tools

    SciTech Connect (OSTI)

    Greitzer, Frank L.; Dauenhauer, Peter M.; Wierks, Tamara G.; Podmore, Robin

    2009-04-01

    This report describes initial human factors evaluation of four visualization tools (Graphical Contingency Analysis, Force Directed Graphs, Phasor State Estimator and Mode Meter/ Mode Shapes) developed by PNNL, and proposed test plans that may be implemented to evaluate their utility in scenario-based experiments.

  13. Carbon Smackdown: Visualizing Clean Energy (LBNL Summer Lecture Series)

    ScienceCinema (OSTI)

    Meza, Juan [LBNL Computational Research Division

    2010-09-01

    The final Carbon Smackdown match took place Aug. 9, 2010. Juan Meza of the Computational Research Division revealed how scientists use computer visualizations to accelerate climate research and discuss the development of next-generation clean energy technologies such as wind turbines and solar cells.

  14. Fuel Cell Backup Power Geographical Visualization Map (Fact Sheet)

    SciTech Connect (OSTI)

    Not Available

    2012-12-01

    This NREL Hydrogen and Fuel Cell Technical Highlight describes a time-lapse geographical visualization map of early market use of fuel cells for telecommunications backup power. The map synthesizes data being analyzed by NREL's Technology Validation team for the U.S. Department of Energy (DOE) Fuel Cell Technologies Program with DOE's publicly available annual summaries of electric disturbance events.

  15. Practical method and device for enhancing pulse contrast ratio for lasers and electron accelerators

    DOE Patents [OSTI]

    Zhang, Shukui; Wilson, Guy

    2014-09-23

    An apparatus and method for enhancing pulse contrast ratios for drive lasers and electron accelerators. The invention comprises a mechanical dual-shutter system wherein the shutters are placed sequentially in series in a laser beam path. Each shutter of the dual shutter system has an individually operated trigger for opening and closing the shutter. As the triggers are operated individually, the delay between opening and closing first shutter and opening and closing the second shutter is variable providing for variable differential time windows and enhancement of pulse contrast ratio.

  16. OPCPA front end and contrast optimization for the OMEGA EP kilojoule, picosecond laser

    SciTech Connect (OSTI)

    Dorrer, C.; Consentino, A.; Irwin, D.; Qiao, J.; Zuegel, J. D.

    2015-09-01

    OMEGA EP is a large-scale laser system that combines optical parametric amplification and solid-state laser amplification on two beamlines to deliver high-intensity, high-energy optical pulses. The temporal contrast of the output pulse is limited by the front-end parametric fluorescence and other features that are specific to parametric amplification. The impact of the two-crystal parametric preamplifier, pump-intensity noise, and pump-signal timing is experimentally studied. The implementation of a parametric amplifier pumped by a short pump pulse before stretching, further amplification, and recompression to enhance the temporal contrast of the high-energy short pulse is described.

  17. Temporal Stability of Visual Search-Driven Biometrics

    SciTech Connect (OSTI)

    Yoon, Hong-Jun; Carmichael, Tandy; Tourassi, Georgia

    2015-01-01

    Previously, we have shown the potential of using an individual s visual search pattern as a possible biometric. That study focused on viewing images displaying dot-patterns with different spatial relationships to determine which pattern can be more effective in establishing the identity of an individual. In this follow-up study we investigated the temporal stability of this biometric. We performed an experiment with 16 individuals asked to search for a predetermined feature of a random-dot pattern as we tracked their eye movements. Each participant completed four testing sessions consisting of two dot patterns repeated twice. One dot pattern displayed concentric circles shifted to the left or right side of the screen overlaid with visual noise, and participants were asked which side the circles were centered on. The second dot-pattern displayed a number of circles (between 0 and 4) scattered on the screen overlaid with visual noise, and participants were asked how many circles they could identify. Each session contained 5 untracked tutorial questions and 50 tracked test questions (200 total tracked questions per participant). To create each participant s "fingerprint", we constructed a Hidden Markov Model (HMM) from the gaze data representing the underlying visual search and cognitive process. The accuracy of the derived HMM models was evaluated using cross-validation for various time-dependent train-test conditions. Subject identification accuracy ranged from 17.6% to 41.8% for all conditions, which is significantly higher than random guessing (1/16 = 6.25%). The results suggest that visual search pattern is a promising, fairly stable personalized fingerprint of perceptual organization.

  18. Ultrascale Visualization Climate Data Analysis Tools (UV-CDAT): Semi-Annual Progress Report

    SciTech Connect (OSTI)

    Williams, D N

    2012-02-29

    This report summarizes work carried out by the Ultrascale Visualization Climate Data Analysis Tools (UV-CDAT) Team for the period of July 1, 2011 through December 31, 2011. It discusses highlights, overall progress, period goals, and collaborations and lists papers and presentations. The UV-CDAT team is positioned to address the following high-level visualization requirements: (1) Alternative parallel streaming statistics and analysis pipelines - Data parallelism, Task parallelism, Visualization parallelism; (2) Optimized parallel input/output (I/O); (3) Remote interactive execution; (4) Advanced intercomparison visualization; (5) Data provenance processing and capture; and (6) Interfaces for scientists - Workflow data analysis and visualization construction tools, Visualization interfaces.

  19. The neurotoxic effects of N-methyl-N-nitrosourea on the electrophysiological property and visual signal transmission of rat's retina

    SciTech Connect (OSTI)

    Tao, Ye; Chen, Tao; Liu, Bei; Yang, Guo Qing; Peng, Guanghua; Zhang, Hua; Huang, Yi Fei

    2015-07-01

    The neurotoxic effects of N-methyl-N-nitrosourea (MNU) on the inner retinal neurons and related visual signal circuits have not been described in any animal models or human, despite ample morphological evidences about the MNU induced photoreceptor (PR) degeneration. With the helping of MEA (multielectrode array) recording system, we gained the opportunity to systemically explore the neural activities and visual signal pathways of MNU administrated rats. Our MEA research identified remarkable alterations in the electrophysiological properties and firstly provided instructive information about the neurotoxicity of MNU that affects the signal transmission in the inner retina. Moreover, the spatial electrophysiological functions of retina were monitored and found that the focal PRs had different vulnerabilities to the MNU. The MNU-induced PR dysfunction exhibited a distinct spatial- and time-dependent progression. In contrast, the spiking activities of both central and peripheral RGCs altered synchronously in response to the MNU administration. Pharmacological tests suggested that gap junctions played a pivotal role in this homogeneous response of RGCs. SNR analysis of MNU treated retina suggested that the signaling efficiency and fidelity of inner retinal circuits have been ruined by this toxicant, although the microstructure of the inner retina seemed relatively consolidated. The present study provided an appropriate example of MEA investigations on the toxicant induced pathological models and the effects of the pharmacological compounds on neuron activities. The positional MEA information would enrich our knowledge about the pathology of MNU induced RP models, and eventually be instrumental for elucidating the underlying mechanism of human RP. - Highlights: • We systemically explored the neural activities and visual signal pathways of MNU administrated retinas. • The focal photoreceptors had different vulnerabilities to the MNU administration.

  20. Remote sensing-based estimation of annual soil respiration at two contrasting forest sites

    DOE Public Access Gateway for Energy & Science Beta (PAGES Beta)

    Gu, Lianhong; Huang, Ni; Black, T. Andrew; Wang, Li; Niu, Zheng

    2015-11-23

    Soil respiration (Rs), an important component of the global carbon cycle, can be estimated using remotely sensed data, but the accuracy of this technique has not been thoroughly investigated. In this article, we proposed a methodology for the remote estimation of annual Rs at two contrasting FLUXNET forest sites (a deciduous broadleaf forest and an evergreen needleleaf forest).

  1. Benchmarking the x-ray phase contrast imaging for ICF DT ice characterization using roughened surrogates

    SciTech Connect (OSTI)

    Dewald, E; Kozioziemski, B; Moody, J; Koch, J; Mapoles, E; Montesanti, R; Youngblood, K; Letts, S; Nikroo, A; Sater, J; Atherton, J

    2008-06-26

    We use x-ray phase contrast imaging to characterize the inner surface roughness of DT ice layers in capsules planned for future ignition experiments. It is therefore important to quantify how well the x-ray data correlates with the actual ice roughness. We benchmarked the accuracy of our system using surrogates with fabricated roughness characterized with high precision standard techniques. Cylindrical artifacts with azimuthally uniform sinusoidal perturbations with 100 um period and 1 um amplitude demonstrated 0.02 um accuracy limited by the resolution of the imager and the source size of our phase contrast system. Spherical surrogates with random roughness close to that required for the DT ice for a successful ignition experiment were used to correlate the actual surface roughness to that obtained from the x-ray measurements. When comparing average power spectra of individual measurements, the accuracy mode number limits of the x-ray phase contrast system benchmarked against surface characterization performed by Atomic Force Microscopy are 60 and 90 for surrogates smoother and rougher than the required roughness for the ice. These agreement mode number limits are >100 when comparing matching individual measurements. We will discuss the implications for interpreting DT ice roughness data derived from phase-contrast x-ray imaging.

  2. Simultaneous topographic and elemental chemical and magnetic contrast in scanning tunneling microscopy

    DOE Patents [OSTI]

    Rose, Volker; Preissner, Curt A; Hla, Saw-Wai; Wang, Kangkang; Rosenmann, Daniel

    2014-09-30

    A method and system for performing simultaneous topographic and elemental chemical and magnetic contrast analysis in a scanning, tunneling microscope. The method and system also includes nanofabricated coaxial multilayer tips with a nanoscale conducting apex and a programmable in-situ nanomanipulator to fabricate these tips and also to rotate tips controllably.

  3. Multi-contrast 3D X-ray imaging of porous and composite materials

    SciTech Connect (OSTI)

    Sarapata, Adrian; Herzen, Julia; Ruiz-Yaniz, Maite; Zanette, Irene; Rack, Alexander; Pfeiffer, Franz

    2015-04-13

    Grating-based X-ray computed tomography allows for simultaneous and nondestructive determination of the full X-ray complex index of refraction and the scattering coefficient distribution inside an object in three dimensions. Its multi-contrast capabilities combined with a high resolution of a few micrometers make it a suitable tool for assessing multiple phases inside porous and composite materials such as concrete. Here, we present quantitative results of a proof-of-principle experiment performed on a concrete sample. Thanks to the complementarity of the contrast channels, more concrete phases could be distinguished than in conventional attenuation-based imaging. The phase-contrast reconstruction shows high contrast between the hardened cement paste and the aggregates and thus allows easy 3D segmentation. Thanks to the dark-field image, micro-cracks inside the coarse aggregates are visible. We believe that these results are extremely interesting in the field of porous and composite materials studies because of unique information provided by grating interferometry in a non-destructive way.

  4. Grating-based phase contrast tomosynthesis imaging: Proof-of-concept experimental studies

    SciTech Connect (OSTI)

    Li, Ke; Ge, Yongshuai; Garrett, John; Bevins, Nicholas; Zambelli, Joseph; Chen, Guang-Hong

    2014-01-15

    Purpose: This paper concerns the feasibility of x-ray differential phase contrast (DPC) tomosynthesis imaging using a grating-based DPC benchtop experimental system, which is equipped with a commercial digital flat-panel detector and a medical-grade rotating-anode x-ray tube. An extensive system characterization was performed to quantify its imaging performance. Methods: The major components of the benchtop system include a diagnostic x-ray tube with a 1.0 mm nominal focal spot size, a flat-panel detector with 96 ?m pixel pitch, a sample stage that rotates within a limited angular span of 30, and a Talbot-Lau interferometer with three x-ray gratings. A total of 21 projection views acquired with 3 increments were used to reconstruct three sets of tomosynthetic image volumes, including the conventional absorption contrast tomosynthesis image volume (AC-tomo) reconstructed using the filtered-backprojection (FBP) algorithm with the ramp kernel, the phase contrast tomosynthesis image volume (PC-tomo) reconstructed using FBP with a Hilbert kernel, and the differential phase contrast tomosynthesis image volume (DPC-tomo) reconstructed using the shift-and-add algorithm. Three inhouse physical phantoms containing tissue-surrogate materials were used to characterize the signal linearity, the signal difference-to-noise ratio (SDNR), the three-dimensional noise power spectrum (3D NPS), and the through-plane artifact spread function (ASF). Results: While DPC-tomo highlights edges and interfaces in the image object, PC-tomo removes the differential nature of the DPC projection data and its pixel values are linearly related to the decrement of the real part of the x-ray refractive index. The SDNR values of polyoxymethylene in water and polystyrene in oil are 1.5 and 1.0, respectively, in AC-tomo, and the values were improved to 3.0 and 2.0, respectively, in PC-tomo. PC-tomo and AC-tomo demonstrate equivalent ASF, but their noise characteristics quantified by the 3D NPS were

  5. Li electrodeposition dynamics visualized in-situ via a TEM liquid...

    Office of Scientific and Technical Information (OSTI)

    visualized in-situ via a TEM liquid cell. Citation Details In-Document Search Title: Li electrodeposition dynamics visualized in-situ via a TEM liquid cell. Abstract not provided. ...

  6. Deploying web-based visual exploration tools on the grid (Journal...

    Office of Scientific and Technical Information (OSTI)

    Journal Article: Deploying web-based visual exploration tools on the grid Citation Details In-Document Search Title: Deploying web-based visual exploration tools on the grid We ...

  7. Deploying web-based visual exploration tools on the grid (Journal...

    Office of Scientific and Technical Information (OSTI)

    Journal Article: Deploying web-based visual exploration tools on the grid Citation Details In-Document Search Title: Deploying web-based visual exploration tools on the grid You ...

  8. Jefferson Lab Dec. 9 Science Lecture Discusses How Visual Illusions Trick

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    the Mind | Jefferson Lab Dec. 9 Science Lecture Discusses How Visual Illusions Trick the Mind Jefferson Lab Dec. 9 Science Lecture Discusses How Visual Illusions Trick the Mind NEWPORT NEWS, Va., Nov. 4, 2009 - Jefferson Lab will host an illuminating and educational presentation on Wednesday, Dec. 9, titled How the Mind Tricks Us: Visualizations and Visual Illusions with Dr. Eric Mazur, Harvard University. Mazur is the Balkanski Professor of Physics and Applied Physics at Harvard University.

  9. Visually Relating Gene Expression and in vivo DNA Binding Data

    SciTech Connect (OSTI)

    Huang, Min-Yu; Mackey, Lester; Ker?; nen, Soile V. E.; Weber, Gunther H.; Jordan, Michael I.; Knowles, David W.; Biggin, Mark D.; Hamann, Bernd

    2011-09-20

    Gene expression and in vivo DNA binding data provide important information for understanding gene regulatory networks: in vivo DNA binding data indicate genomic regions where transcription factors are bound, and expression data show the output resulting from this binding. Thus, there must be functional relationships between these two types of data. While visualization and data analysis tools exist for each data type alone, there is a lack of tools that can easily explore the relationship between them. We propose an approach that uses the average expression driven by multiple of ciscontrol regions to visually relate gene expression and in vivo DNA binding data. We demonstrate the utility of this tool with examples from the network controlling early Drosophila development. The results obtained support the idea that the level of occupancy of a transcription factor on DNA strongly determines the degree to which the factor regulates a target gene, and in some cases also controls whether the regulation is positive or negative.

  10. A Visual Analytics Approach for Correlation, Classification, and Regression Analysis

    SciTech Connect (OSTI)

    Steed, Chad A; SwanII, J. Edward; Fitzpatrick, Patrick J.; Jankun-Kelly, T.J.

    2012-02-01

    New approaches that combine the strengths of humans and machines are necessary to equip analysts with the proper tools for exploring today's increasing complex, multivariate data sets. In this paper, a novel visual data mining framework, called the Multidimensional Data eXplorer (MDX), is described that addresses the challenges of today's data by combining automated statistical analytics with a highly interactive parallel coordinates based canvas. In addition to several intuitive interaction capabilities, this framework offers a rich set of graphical statistical indicators, interactive regression analysis, visual correlation mining, automated axis arrangements and filtering, and data classification techniques. The current work provides a detailed description of the system as well as a discussion of key design aspects and critical feedback from domain experts.