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Sample records for owl strix occidentalis

  1. Protecting Wildlife

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Found in Pellets of Mexican Spotted Owls (Strix occidentalis lucida) from Los Alamos, New Mexico Polychlorinated Biphenyls (PCBs) in Predator and Bottom-Feeding Fish from Abiquiu...

  2. Owls Head, Maine: Energy Resources | Open Energy Information

    Open Energy Info (EERE)

    Owls Head, Maine: Energy Resources Jump to: navigation, search Equivalent URI DBpedia Coordinates 44.082303, -69.0572612 Show Map Loading map... "minzoom":false,"mappingservic...

  3. Seven federally protected Mexican spotted owl chicks hatch on Los Alamos

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    National Laboratory property Federally protected Mexican spotted owl chicks hatch on LANL property Seven federally protected Mexican spotted owl chicks hatch on Los Alamos National Laboratory property Biologists located a record seven federally threatened Mexican spotted owl chicks on Los Alamos National Laboratory property during nest surveys last month. July 13, 2015 A parent owl sits with two chicks. A parent owl sits with two chicks. Contact Los Alamos National Laboratory Lorrie

  4. Distribution of the Chuckwalla, Western Burrowing Owl, and Six Bat Species on the Nevada Test Site

    SciTech Connect (OSTI)

    Cathy A. Willis

    1997-05-01

    Field Surveys were conducted in 1996 to determine the current distribution of several animal species of concern on the Nevada Test Site (NTS). They included the chuckwall (Sauromalus obesus), western burrowing owl (Speotyto cunicularia), and six species of bats. Nineteen chuckwallas and 118 scat locations were found during the chuckwalla field study. Eighteen western burrowing owls were found at 12 sighting locations during the 1996 field study. Of the eleven bat species of concern which might occur on the NTS, five, and possibly six, were captured during this survey. The U.S. Department of Energy, Nevada Operations Office, takes certain management actions to protect and conserve the chuckwalla, western burrowing owl, and bats on the NTS. These actions are described and include: (1) conducting surveys at sites of proposed land-disturbing activities (2) altering projects whenever possible to avoid or minimize impacts to these species (3) maintaining a geospatial database of known habitat for species of concern (4) sharing sighting and trap location data gathered on the NTS with other local land and resource managers, and (5) conducting periodic field surveys to monitor these species distribution and relative abundance on the NTS.

  5. Hihan Sapa Wapaha Tate Woilagyapi Owl Feather War Bonnet Wind Farm Rosebud Sioux Tribe

    Energy Savers [EERE]

    Donald Hihan Sapa Wapaha Tate Woilagyapi Owl Feather War Bonnet Wind Farm Rosebud Sioux Tribe Resource Development Office/Tribal Utilities Commission Distributed Generation Systems, Inc. (Disgen) Dept. of Energy Grant DOE Funding $448,551.00 DISGEN Cost share/in-kind $78,750.00 RST/TUC Cost share/in-kind $27,272.00 The Participants: Rosebud Sioux Tribe, Resource Development Phil Two Eagle, Resource Dev. Dir. Ken Haukaas, Wind Farm Coordinator Dr. Bill Akard, Sinte Gleska University, Cultural

  6. Rosebud Sioux Tribe - Owl Feather War Bonnet Wind Farm

    Energy Savers [EERE]

    Anticipated Time Lines * Nov. 2005, Complete NEPA and Submit to BIA * Dec. 2005 Obtain Power Purchase Agreement * Jan 2006, BIA issues FONSI * Nov. 05- Jan 2006, Dev. financial structure, LLC and secure RST Tribal approval * Dec.05- Feb 2006, Engage Investors/Rural Utilities Service, USDA, Secure Loan, Est. Proj. Costs 46 million * July 2006 Construction underway * Dec 2006 Wind farm on line Old Bristow Ranch Met tower Tribal lands North Antelope Met Tower Tribal lands

  7. Rosebud Sioux Tribe - Owl Feather War Bonnet Wind Farm

    Energy Savers [EERE]

    Artist

  8. Burrowing Owl Monitoring Report for Calendar Year 2012

    SciTech Connect (OSTI)

    Wilde, Justin W.; Lindsey, Cole T.; Nugent, John J.

    2013-03-14

    The monitoring during 2012 focused on documenting the status of known burrows. Newly identified burrows were documented while examining historical locations, during ecological resource reviews, or discovered during other monitoring efforts. The timing of the monitoring effort allowed staff to perform the surveys without disrupting any breeding or hatching, while also allowing for easy discernment of adults from juveniles, which helped in determining burrow-use type.

  9. Endangered Species

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Owl The Mexican spotted owl is the only subspecies of spotted owl recognized in New Mexico and generally inhabits mixed conifer and ponderosa pine forests in mountains and...

  10. Seven federally protected Mexican spotted owl chicks hatch on Los Alamos

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    National Nuclear Security Administration Seven NNSS buildings achieve High Performance Sustainable Building status Monday, March 21, 2016 - 2:15pm Nevada Support Facility (NSF), Nevada National Security Site administrative headquarters. Nevada National Security Site (NNSS) - The National Nuclear Security Administration announced the award today of seven High Performance Sustainable Building (HPSB) plaques to the NNSS team for seven "green" buildings. The buildings are:

  11. New exhibit highlights the archaeology, wildlife and climate...

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    include two new iPad apps. "Owls and Bats of Los Alamos," allows museum visitors to identify various species of bats and owls living in local habitats, listen to owl calls,...

  12. Opens Sept. 17 at Laboratory's Bradbury Science Museum

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    include two new iPad apps. "Owls and Bats of Los Alamos," allows museum visitors to identify various species of bats and owls living in local habitats, listen to owl calls,...

  13. Proposed Resource Management Plan/Final Environmental Impact...

    National Nuclear Security Administration (NNSA)

    ... owl (BLM sensitive species) * Sunnyside green gentian (BLM sensitive species) To manage ... Monitoring wind energy development projects; and * Rehabilitating areas damaged by fires. ...

  14. Press Pass - Press Releases

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    falcons and owls as well as a collection of bird bones, droppings, feathers and hunting gear. The program is designed for grades first through seventh grade students and scout...

  15. Fermilab | Newsroom | Press Releases | June 2, 2015: Bison, birds...

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    hawks, falcons and owls, as well as a collection of bird bones, feathers and hunting gear for children to enjoy. "We want kids to come away with an appreciation of nature," said...

  16. Fermilab Today

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    hawks, falcons and owls, as well as a collection of bird bones, feathers and hunting gear for children to enjoy. "We want kids to come away with an appreciation of nature," said...

  17. Fermilab | Newsroom | Press Releases | May 28, 2013: Bison, birds...

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    hawks, falcons and owls, as well as a collection of bird bones, feathers and hunting gear for children to enjoy. "We want kids to come away with an appreciation of nature," said...

  18. Fermilab | Newsroom | Press Releases | May 22, 2012: Fermilab...

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    falcons and owls as well as a collection of bird bones, droppings, feathers and hunting gear. For additional information, call 630-840-5588 or e-mail edreg@fnal.gov. About...

  19. Fermilab | Newsroom | Press Releases | May 28, 2014: Bison, birds...

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    hawks, falcons and owls, as well as a collection of bird bones, feathers and hunting gear for children to enjoy. We want kids to come away with an appreciation of nature,...

  20. Fermilab | Newsroom | Press Releases | Fermilab Outdoor Family...

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    falcons and owls as well as a collection of bird bones, droppings, feathers and hunting gear. The program is designed for first through seventh grade students. Scout troops are...

  1. Saw What? Saw Whet!

    Broader source: Energy.gov [DOE]

    For the second year in a row, in early November, the Fernald Preserve in Ohio hosted a Northern Saw-Whet Owl banding demonstration by master bander, Tim Tolford. Bird banding is a technique used to...

  2. Spotlights Archive | Department of Energy

    Office of Energy Efficiency and Renewable Energy (EERE) Indexed Site

    hosted a Northern Saw-Whet Owl banding demonstration by master bander, Tim Tolford. Bird banding is a technique used to study wild birds by attaching a tag to their leg to...

  3. Protecting Lab land and the creatures that inhabit it

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    April 1, 2013 View of Sangre de Christo mauntains from overlook on NM502 Mexican Spotted Owls live on Lab property. Contact Editor Linda Anderman Email Community Programs Office...

  4. Wind Development on the Rosebud

    Office of Environmental Management (EM)

    Proposed Owl Feather War Bonnet Wind Farm, 30Mw Met towers installed in 2003 Met towers installed in 2009 Proposed North Antelope Highlands Wind Farm, 190Mw 750 Kilowatt ...

  5. Wind Development on the Rosebud

    Office of Environmental Management (EM)

    Rosebud Sioux Indian Reservation Wind Development on the Rosebud Akicita Cikala 750 Kw turbine Owl Feather War Bonnet Wind Farm LLC, 30Mw North Antelope Project 190Mw Akicita ...

  6. Wind Development on the Rosebud

    Energy Savers [EERE]

    From the book, Black Elk speaks, 1932 Rosebud Sioux Indian Reservation Wind Development on the Rosebud D Akicita Cikala 750 Kw turbine Proposed Owl Feather War Bonnet Wind Farm, ...

  7. Employee Spotlight: Dave Keller

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    what seems like another owl prompts them to respond, letting the visitor know that the space is already occupied. Dave Keller with bird From the end of March into early May,...

  8. Employee Spotlight: Dave Keller

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    what seems like another owl prompts them to respond, letting the visitor know that the space is already occupied. From the end of March into early May, near the beginning of the...

  9. Environmental Evaluation for Installation of Solar Arrays at San Jose/Santa Clara Water Pollution Control Plant

    Broader source: Energy.gov [DOE]

    The purpose of this technical memorandum (TM) is to review the options to develop a potential solar array development (Project) within or adjacent to western burrowing owl (Athene cunicularia) habitat in the buffer lands that surround the San José/Santa Clara Water Pollution Control Plant (WPCP) and to determine if there is a ground-mounted solar photovoltaic (PV) configuration that would enable a workable co-existence between the burrowing owl habitat and the PV arrays.

  10. 1

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Seven federally protected Mexican spotted owl chicks hatch on Los Alamos National Laboratory property July 13, 2015 LOS ALAMOS, N.M., July 13, 2015-Biologists located a record seven federally threatened Mexican spotted owl chicks on Los Alamos National Laboratory property during nest surveys last month."We've never found this many chicks," said Chuck Hathcock, wildlife biologist with the Environmental Stewardship group at Los Alamos National Laboratory. "It's encouraging to see

  11. Sicangu Lakota Oyate, Hihan Sapa Wapaha, Tate Woilagyapi Project - 30 MW Wind Energy Facility

    Energy Savers [EERE]

    Sicangu Lakota Oyate (Rosebud Sioux Tribe) Hihan Sapa Wapaha Tate Woilagyapi Project (Owl Feather War Bonnet Wind Project) 30 MW Wind Energy Facility Phil Two Eagle, Director Ken Haukaas, Project Manager Resource Development Office Dale Osborn, President Distributed Generation Systems, Inc. (DISGEN) www.disgenonline.com Sicangu Lakota Oyate (Rosebud Sioux Tribe) Hihan Sapa Wapaha Tate Woilagyapi Project (Owl Feather War Bonnet Wind Project) Project Objectives 1. Complete all the development

  12. Endangered Species

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Endangered Species Protecting our Endangered Species The Endangered Species Act requires that endangered species be protected at the individual level. February 2, 2015 Adult Mexican Spotted Owl Adult Mexican Spotted Owl recorded in 2010. Contact Environmental Communication & Public Involvement P.O. Box 1663 MS M996 Los Alamos, NM 87545 (505) 667-0216 Email The Habitat Management Plan details how threatened and endangered species and their habitats are managed at LANL. Endangered species on

  13. CX-008784: Categorical Exclusion Determination

    Broader source: Energy.gov [DOE]

    License Outgrant to Owl Creek Water District Town of Thermopolis, Hot Springs County, Wyoming CX(s) Applied: B4.9 Date: 07/23/2012 Location(s): Wyoming Offices(s): Western Area Power Administration-Rocky Mountain Region

  14. Ecological Monitoring and Compliance Program Fiscal Year 2001

    SciTech Connect (OSTI)

    C. A. Wills

    2001-12-01

    The Ecological Monitoring and Compliance program, funded through the U.S. Department of Energy, National Nuclear Security Administration Nevada Operations Office, monitors the ecosystem of the Nevada Test Site (NTS) and ensures compliance with laws and regulations pertaining to NTS biota. This report summarizes the program's activities conducted by Bechtel Nevada during fiscal year 2001. Program activities included: (1) biological surveys at proposed construction sites, (2) desert tortoise compliance, (3) ecosystem mapping and data management, (4) sensitive species and unique habitat monitoring, and (5) biological monitoring at the HAZMAT Spill Center. Biological surveys for the presence of sensitive species were conducted for 23 NTS projects. Eleven sites were in desert tortoise habitat. These projects have the potential to disturb a total of 588 acres, where 568 acres of disturbance would be off-road driving. No tortoises were found in or displaced from project areas, and no tortoise s were accidentally injured or killed at project areas. One tortoise was crushed by a vehicle on a paved road. A topical report describing the classification of habitat types on the NTS was completed and distributed. The report is the culmination of three years of field vegetation mapping and the analysis of vegetation data from over 1,500 ecological landform units. Compilation of historical wildlife data was initiated. A long-term monitoring plan for important plant species that occur on the NTS was completed. Site-wide monitoring was conducted for the western burrowing owl, bat species of concern, wild horses, and raptor nests. Sixty-nine of 77 known owl burrows were monitored. As in previous years, some owls were present year round on the NTS. An overall decrease in active owl burrows was observed within all three ecoregions (Mojave Desert, Transition, Great Basin Desert) from October through January. An increase in active owl burrows was observed from mid March to early April. A total of 55 juvenile owls was detected from 11 breeding pairs. Pellet analysis of burrowing owls was completed which identified key prey species. A total of 272 bats, representing 10 bat species were captured in mist-nets at water sources in the Great Basin Desert ecoregion. Bats were detected with the Anabat II call-recording system at water sources and selected tunnel and mine entrances. Thirty-seven adult horses and 11 foals were counted this year. Two of the eleven foals observed last year survived to yearlings. Seven active raptor nests were found and monitored this year. These included two Great-horned Owl nests, three Barn Owl nests, and two Red-tailed Hawk nests. Selected wetlands and man-made water sources were monitored for physical parameters and wildlife use. No dead animals were observed this year in any plastic-lined sump. The chemical spill test plans for four experiments at the HAZMAT Spill Center were reviewed for their potential to impact biota downwind of spills on Frenchman Lake playa.

  15. NNSA's Sequoia Supercomputer Ranked as World's Fastest | National

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Security Administration Pantex Plant recognized for bird conservation Tuesday, March 15, 2016 - 12:02pm Western burrowing owls. (U.S. Fish & Wildlife Service photo) The U.S. Fish & Wildlife Service's Council for the Conservation of Migratory Birds named NNSA's Pantex Plant one of five finalists for the 2016 Presidential Migratory Bird Federal Stewardship Award for its excellence in conservation of migratory birds through research collaboration. The comprehensive research program at

  16. SREL Reprint #3256

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    6 Siren sp. Predation Thomas M. Luhring1,2, J. Whitfield Gibbons1, and Parker W. Gibbons1 1Savannah River Ecology Laboratory, Drawer E, Aiken, SC 29802, USA 2University of Missouri, Division of Biological Sciences, 105 Tucker Hall, Columbia, MO 65211, USA Abstract: The first confirmed observation of a Barred Owl depredating a sirenid. SREL Reprint #3256 Luhring, T. M., J. W. Gibbons, and P. W. Gibbons. 2013. Siren sp. Predation. Herpetological Review 44(3): 491-49

  17. In other news

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    In other news Community Connections: Your link to news and opportunities from Los Alamos National Laboratory Latest Issue:May 2016 all issues All Issues » submit In other news Maestas-Swazo named Lab's tribal liaison; new head for DOE's Los Alamos cleanup office; 2015 recipients of Northern New Mexico Tribal Business Scholarship; LANL Laces and school supplies drive invest in students; seven Mexican spotted owl chicks hatch on Lab property; new podcast September 1, 2015 Baxter the Bear of Del

  18. Aqueous geochemistry of the Thermopolis hydrothermal system, southern Bighorn Basin, Wyoming, U.S.A.

    DOE Public Access Gateway for Energy & Science Beta (PAGES Beta)

    Kaszuba, John P.; Sims, Kenneth W.W.; Pluda, Allison R.

    2014-06-01

    The Thermopolis hydrothermal system is located in the southern portion of the Bighorn Basin, in and around the town of Thermopolis, Wyoming. It is the largest hydrothermal system in Wyoming outside of Yellowstone National Park. The system includes hot springs, travertine deposits, and thermal wells; published models for the hydrothermal system propose the Owl Creek Mountains as the recharge zone, simple conductive heating at depth, and resurfacing of thermal waters up the Thermopolis Anticline.

  19. Aqueous geochemistry of the Thermopolis hydrothermal system, southern Bighorn Basin, Wyoming, U.S.A.

    SciTech Connect (OSTI)

    Kaszuba, John P. [Univ. of Wyoming, Laramie, WY (United States). Dept. of Geology and Geophysics; Sims, Kenneth W.W. [Univ. of Wyoming, Laramie, WY (United States). School of Energy Resources; Pluda, Allison R. [Univ. of Wyoming, Laramie, WY (United States). Wyoming High-Precision Isotope Lab.

    2014-03-01

    The Thermopolis hydrothermal system is located in the southern portion of the Bighorn Basin, in and around the town of Thermopolis, Wyoming. It is the largest hydrothermal system in Wyoming outside of Yellowstone National Park. The system includes hot springs, travertine deposits, and thermal wells; published models for the hydrothermal system propose the Owl Creek Mountains as the recharge zone, simple conductive heating at depth, and resurfacing of thermal waters up the Thermopolis Anticline.

  20. HNF-54294

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    94 Revision 0 Approved for Public Release Further Dissemination Unlimited Burrowing Owl Monitoring Report for Calendar Year 2012 Prepared for the U.S. Department of Energy Assistant Secretary for Environmental Management Contractor for the U.S. Department of Energy under Contract DE-AC06-09RL14728 P.O. Box 650 Richland, Washington 99352 HNF-54294 Revision 0 TRADEMARK DISCLAIMER Reference herein to any specific commercial product, process, or service by trade name, trademark, manufacturer, or

  1. HNF-56531

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    531 Revision 0 Approved for Public Release Further Dissemination Unlimited Hanford Site Burrowing Owl Monitoring Report for Calendar Year 2013 Prepared for the U.S. Department of Energy Assistant Secretary for Environmental Management Contractor for the U.S. Department of Energy under Contract DE-AC06-09RL14728 P.O. Box 650 Richland, Washington 99352 HNF-56531 Revision 0 TRADEMARK DISCLAIMER Reference herein to any specific commercial product, process, or service by trade name, trademark,

  2. AlumniLink: September 2015

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Alumni Link: Opportunities, News and Resources for Former Employees Latest Issue:September 2015 all issues All Issues » submit IN THIS ISSUE New science and news Young, Jupiter-like planet discovered Four Los Alamos projects selected as R&D 100 Award finalists Seven federally protected Mexican spotted owl chicks hatch on Lab property Where former employees are now Alumni: Duane Hatch, Belmont University Alumni: Alexia Schulz, MIT Lincoln Laboratory Funding opportunities Potential

  3. Ecological Monitoring and Compliance Program Fiscal Year 2000 Report

    SciTech Connect (OSTI)

    Wills, C.A.

    2000-12-01

    The Ecological Monitoring and Compliance program, funded through the U.S. Department of Energy, Nevada Operations Office, monitors the ecosystem of he Nevada Test Site (NTS) and ensures compliance with laws and regulations pertaining to NTS biota. This report summarizes the program's activities conducted by Bechtel Nevada during fiscal year 2000. Program activities included: (1) biological surveys at proposed construction sites, (2) desert tortoise compliance,(3) ecosystem mapping, (4) sensitive species and unique habitat monitoring, and (5) biological monitoring at the HAZMAT Spill Center. Biological surveys for the presence of sensitive species were conducted for 24 NTS projects. Seventeen sites were in desert tortoise habitat, and six acres of tortoise habitat were documented as being disturbed this year. No tortoises were found in or displaced from project areas, and no tortoises were accidentally injured or killed. A topical report describing the classification of habitat types o n the NTS was completed. The report is the culmination of three years of field vegetation mapping and the analysis of vegetation data from over 1,500 ecological landform units. A long-term monitoring plan for important plant species that occur on the NTS was completed. Sitewide inventories were conducted for the western burrowing owl, bat species of concern, wild horses, raptor nests, and mule deer. Fifty-nine of 69 known owl burrows were monitored. Forty-four of the known burrows are in disturbed habitat. As in previous years, some owls were present year round on the NTS. An overall decrease in active owl burrows was observed within all three ecoregions (Mojave Desert, Transition, Great Basin Desert) from October through January. An increase in active owl burrows was observed from mid-March to early April. A total of 45 juvenile owls was detected from eight breeding pairs. One nest burrow was detected in the Mojave Desert,one in the Great Basin Desert, and six in the Transition ecoregion. Seventy bats, representing four bat species of concern, were captured in mist-nets at water sources in the Great Basin Desert ecoregion. Bats were detected with the Anabat II call-recording system at selected tunnel and mine entrances verifying that some NTS mines and tunnels are used as bat roosts. Thirty-seven adult horses and 11 foals were counted this year. Four of the five foals observed last year have survived to yearlings. A monitoring plan for NTS horses was completed. Six active red-tailed hawk nests and 10 nestling red-tailed hawks were detected this year. Two spotlighting surveys for mule deer were conducted, each over three consecutive nights in October 1999 and August 2000. The mean sighting rate in October was 1.2 deer/10 kilometers (km) and 1.6 deer/10 km in August. Selected wetlands and man-made water sources were monitored for physical parameters and wildlife use. No dead animals were observed this year in any plastic-lined sump. Pahute Mesa Pond was confirmed to have vegetation,hydrology, and soil indicators that qualify the site as a jurisdictional wetland. The chemical spill test plan for one experiment at the HAZMAT Spill Center was reviewed for its potential to impact biota downwind of spills on Frenchman Lake playa.

  4. Next Generation Models for Storage and Representation of Microbial Biological Annotation

    SciTech Connect (OSTI)

    Quest, Daniel J; Land, Miriam L; Brettin, Thomas S; Cottingham, Robert W

    2010-01-01

    Background Traditional genome annotation systems were developed in a very different computing era, one where the World Wide Web was just emerging. Consequently, these systems are built as centralized black boxes focused on generating high quality annotation submissions to GenBank/EMBL supported by expert manual curation. The exponential growth of sequence data drives a growing need for increasingly higher quality and automatically generated annotation. Typical annotation pipelines utilize traditional database technologies, clustered computing resources, Perl, C, and UNIX file systems to process raw sequence data, identify genes, and predict and categorize gene function. These technologies tightly couple the annotation software system to hardware and third party software (e.g. relational database systems and schemas). This makes annotation systems hard to reproduce, inflexible to modification over time, difficult to assess, difficult to partition across multiple geographic sites, and difficult to understand for those who are not domain experts. These systems are not readily open to scrutiny and therefore not scientifically tractable. The advent of Semantic Web standards such as Resource Description Framework (RDF) and OWL Web Ontology Language (OWL) enables us to construct systems that address these challenges in a new comprehensive way. Results Here, we develop a framework for linking traditional data to OWL-based ontologies in genome annotation. We show how data standards can decouple hardware and third party software tools from annotation pipelines, thereby making annotation pipelines easier to reproduce and assess. An illustrative example shows how TURTLE (Terse RDF Triple Language) can be used as a human readable, but also semantically-aware, equivalent to GenBank/EMBL files. Conclusions The power of this approach lies in its ability to assemble annotation data from multiple databases across multiple locations into a representation that is understandable to researchers. In this way, all researchers, experimental and computational, will more easily understand the informatics processes constructing genome annotation and ultimately be able to help improve the systems that produce them.

  5. Rosebud Sioux Tribes - Next Steps Toward Wind Development

    Energy Savers [EERE]

    Montileaux Rosebud Sioux Indian Reservation MET Tower Oct '03 At 50 meter height Ave. wind 19.25 mph MET Tower Oct '03 At 50 meter height Ave. wind 16.9 mph MET Tower May 2001 Rosebud Indian Reservation May, 2001 Owl Feather War Bonnet Wind F Little Soldier Turbine Farm Little Soldier Turbine  Commissioned in March '03  Neg Micon, Vestas, 750 Kw Turbine  Cost was $1,226,804.00  DOE grant of $566,000.00  RUS Loan of $660,804.00  Initial PPA with Basin Electric for 2.5 years 

  6. Modeling Social Movement Theory for the Intelligence Community: A Case Study

    SciTech Connect (OSTI)

    Pouchard, Line C.; Paulson, Patrick R.; Hohimer, Ryan E.

    2007-10-09

    We describe the modeling of concepts taken from social and behavioral science theories, specifically Social Movement Theory, with OWL ontologies. One goal of the study was to provide analysts with a way to understand the potential contribution of social movement research to their tasks without interrupting workflow. Another goal was to facilitate knowledge transfer at the point of need between busy analysts and the latest research. Instead of providing mechanisms for obtaining consensus on debated concepts, we used different namespaces for each author and record bibliographic information in another ontology. We also describe a framework for knowledge discovery supported by the ontologies.

  7. Modeling Social Movement Theory for the Intelligence Community: A Case Study.

    SciTech Connect (OSTI)

    Pouchard, Line Catherine; Hohimer, Ryan; Paulson, Patrick

    2007-01-01

    We describe the modeling of concepts taken from social and behavioral science theories, specifically Social Movement Theory, with OWL ontologies. One goal of the study was to provide analysts with a way to understand the potential contribution of social movement research to their tasks without interrupting workflow. Another goal was to facilitate knowledge transfer at the point of need between busy analysts and the latest research. Instead of providing mechanisms for obtaining consensus on debated concepts, we used different namespaces for each author and record bibliographic information in another ontology. We also describe a framework for knowledge discovery supported by the ontologies.

  8. Making the Most of Mitigation | Department of Energy

    Energy Savers [EERE]

    Making the Most of Mitigation Making the Most of Mitigation September 2, 2014 - 1:41pm Addthis The current site-wide approach for long-term protection of LANL’s threatened and endangered species originated from the 1995 discovery of a nesting pair of Mexican spotted owls near a proposed explosives testing facility. (See LLQR, June 1999, page 1.) (Photo: Chuck Hathcock, Wildlife Biologist, LANL Environmental Protection Division) The current site-wide approach for long-term protection of

  9. High-Tech Halloween at the Lab's museum is "Spooktacular"

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    High-Tech Halloween Is "Spooktacular" Community Connections: Your link to news and opportunities from Los Alamos National Laboratory Latest Issue:May 2016 all issues All Issues » submit High-Tech Halloween at the Lab's museum is "Spooktacular" There will be activities for all ages, ranging from a maze for preschoolers to a live owl and tarantula for those less easily frightened. October 1, 2012 dummy image Read our archives Contacts Editor Linda Anderman Email Community

  10. Ecological Monitoring and Compliance Program Fiscal Year 2002 Report

    SciTech Connect (OSTI)

    C. A. Wills

    2002-12-01

    The Ecological Monitoring and Compliance program, funded through the U.S. Department of Energy, National Nuclear Security Administration Nevada Operations Office, monitors the ecosystem of the Nevada Test Site (NTS) and ensures compliance with laws and regulations pertaining to NTS biota. This report summarizes the program's activities conducted by Bechtel Nevada (BN) during fiscal year 2002. Program activities included: (1) biological surveys at proposed construction sites, (2) desert tortoise compliance, (3) ecosystem mapping and data management, (4) sensitive species and unique habitat monitoring, and (5) biological monitoring at the HAZMAT Spill Center. Biological surveys for the presence of sensitive species and important biological resources were conducted for 26 NTS projects. These projects have the potential to disturb a total of 374 acres. Thirteen of the projects were in desert tortoise habitat, and 13.38 acres of desert tortoise habitat were disturbed. No tortoises were found in or displaced from project areas, and no tortoises were accidentally injured or killed at project areas or along paved roads. Compilation of historical wildlife data continued this year in efforts to develop faunal distribution maps for the NTS. Photographs associated with the NTS ecological landform units sampled to create the NTS vegetation maps were cataloged for future retrieval and analysis. The list of sensitive plant species for which long-term population monitoring is scheduled was revised. Six vascular plants and five mosses were added to the list. Plant density estimates from ten populations of Astragalus beatleyae were collected, and eight known populations of Eriogonum concinnum were visited to assess plant and habitat status. Minimal field monitoring of western burrowing owl burrows occurred. A report relating to the ecology of the western burrowing owl on the Nevada Test Site was prepared which summarizes four years of data collected on this species' distribution, burrow use, reproduction, activity patterns, and food habits. Bat roost sites within seven buildings slated for demolition were identified, and a BN biologist was a contributing author of the Nevada Bat Conservation Plan published by the Nevada Bat Working Group. Thirty-three adult horses and five foals were counted this year. Six active raptor nests (two American kestrel, two Red-tailed hawk, and two Great-horned owl nests) were found and monitored this year. Selected wetlands and man-made water sources were monitored for physical parameters and wildlife use. No dead animals were observed this year in any plastic-lined sump. The chemical release test plan for one experiment at the HAZMAT Spill Center on Frenchman Lake playa was reviewed. Seasonal sampling of downwind and upwind transects near the spill center was conducted to document baseline conditions of biota.

  11. Gamma ray bursts and extreme energy cosmic rays

    SciTech Connect (OSTI)

    Scarsi, Livio

    1998-06-15

    Extreme Energy Cosmic Ray particles (EECR) with E>10{sup 20} eV arriving on Earth with very low flux ({approx}1 particle/Km{sup 2}-1000yr) require for their investigation very large detecting areas, exceeding values of 1000 km{sup 2} sr. Projects with these dimensions are now being proposed: Ground Arrays ('Auger' with 2x3500 km{sup 2} sr) or exploiting the Earth Atmosphere as seen from space ('AIR WATCH' and OWL,'' with effective area reaching 1 million km{sup 2} sr). In this last case, by using as a target the 10{sup 13} tons of air viewed, also the high energy neutrino flux can be investigated conveniently. Gamma Rays Bursts are suggested as a possible source for EECR and the associated High Energy neutrino flux.

  12. Unmanned systems win unexpected support

    SciTech Connect (OSTI)

    Schneiderman, R.

    1991-09-01

    A review of unmanned aerial vehicles (UAVs) is presented in which emphasis is given to recent mission accomplishments and current directions of research. Existing and new military UAV programs are listed with reference to funding, the type of vehicle, and level of development. Several trends are established including the reliance of UVAs on global positioning satellites and advanced electronics and the growth of the UVA industry. UVAs that are in advanced stages of development or have been deployed include short-range UAV such as the Pioneer, the Pointer, the Sky Owl, and the Hunter. Key UAV systems are described such as the Advanced Tactical Airborne Reconnaissance System, the Maritime Vertical Takeoff and Landing, and other VTOL systems. Very small UVAs and Exdrones are also discussed, and a weather reconnaissance system and surveillance systems are mentioned.

  13. A Posteriori Ontology Engineering for Data-Driven Science

    SciTech Connect (OSTI)

    Gessler, Damian Dg; Joslyn, Cliff A.; Verspoor, Karin M.

    2013-05-28

    Science—and biology in particular—has a rich tradition in categorical knowledge management. This continues today in the generation and use of formal ontologies. Unfortunately, the link between hard data and ontological content is predominately qualitative, not quantitative. The usual approach is to construct ontologies of qualitative concepts, and then annotate the data to the ontologies. This process has seen great value, yet it is laborious, and the success to which ontologies are managing and organizing the full information content of the data is uncertain. An alternative approach is the converse: use the data itself to quantitatively drive ontology creation. Under this model, one generates ontologies at the time they are needed, allowing them to change as more data influences both their topology and their concept space. We outline a combined approach to achieve this, taking advantage of two technologies, the mathematical approach of Formal Concept Analysis (FCA) and the semantic web technologies of the Web Ontology Language (OWL).

  14. Toward a political analysis of the consequences of a world climate change produced by increasing atmospheric carbon dioxide

    SciTech Connect (OSTI)

    Schware, R.

    1980-01-01

    It was Hegel's extraordinarily deep and perceptive insight that mankind is caught up in a drama that cannot be fully understood until it has been played out. The owl of Minewa spreads its wings only with the falling of the dusk. On the more hopeful side is the fact that, although we cannot know the consequences of future interactions between climate and society, we can begin to work toward political solutions and gird ourselves for ominous trends that are now coming into view. The purpose of this paper is to identify one such trend, namely the increase of atmospheric temperatures due to increased carbon dioxide (CO/sub 2/) and lay some initial groundwork for political research related to climate-societal interactions.

  15. TITLE

    Office of Legacy Management (LM)

    J a s 1. Besl President Force Control Industries 3664 Dixla H i 9 h p ~ Falrfleld, Ohio 45014 Dear Hr. Besl: With your consent,. the U.S. Dcpartwnt o f Energy (WE) conducted a r a d i o l q l l c a l survey a t the Former Associate A i r c r a f t Tool and Manufrcturlng Conpany s l t e i n Fairfield, Ohio. OOE has received the-auwey report frm i t s survey. contractor, Oak Rldge national Laboratory (OWL). Two copies o f the report are enclosed f o r your information and use. 71.5 report C 0 n ~

  16. Supplementary Feeding, Plumage Documentation and Early Season Prey of Peregrine Falcons at the New Mexico Alpha Eyrie

    SciTech Connect (OSTI)

    Ponton, David A.

    2015-03-20

    A review of what is known about avian physiology and the biological effects of DDE suggests that some benefit to peregrine falcon egg condition could be attained by artificially feeding DDE free prey to the female from the time of her arrival on the nesting grounds until completion of egg laying; the magnitude of potential benefit is unknown. Sporadic efforts in the past demonstrated the need for precision methods of prey delivery. Two methods were developed and tried; providing dead prey items by dropping them in a day perch, and delivery of live prey by remotely controlled release from compartments positioned at the top of the cliff occupied by the falcons. Maintaining quail in the day perch for 21 days resulted in at least one and probably two meals for the female peregrine. Of 16 live birds released (mostly pigeons) 13 were pursued and three caught. Blinding the pigeons with tape proved to be necessary to enable capture. Also, some reluctance of the male peregrine to attack pigeons was observed, and problems with equipment, visibility, and the proximity of the falcons to the release box were encountered. Manpower was the most significant resource requirement. Baiting of great-horned owls, possibly leading to owl attack on the falcons, is judged to be the largest detrimental effect of supplemental feeding. It is recommended that supplemental feeding be reserved for falcons or eyries where complete reproductive failure is expected. Plumage documentation photography was successfully conducted by a remotely controlled camera as an aid to identification of individual falcons. American robin, red-winged blackbird, starling, white-throated swift, bluebird, and mourning dove were among natural prey consumed by the peregrines before completion of egg laying. All activities in close proximity to the cliff were conducted at night to preclude direct disturbance of the falcons.

  17. Binding and Direct Electrochemistry of OmcA, an Outer-Membrane Cytochrome from an Iron Reducing Bacterium, with Oxide Electrodes: A Candidate Biofuel Cell System

    SciTech Connect (OSTI)

    Eggleston, Carrick M.; Voros, Janos; Shi, Liang; Lower, Brian H.; Droubay, Timothy C.; Colberg, Patricia J.

    2008-02-15

    Dissimilatory iron-reducing bacteria transfer electrons to solid ferric respiratory electron acceptors. Outer-membrane cytochromes expressed by these organisms are of interest in both microbial fuel cells and biofuel cells. We use optical waveguide lightmode spectroscopy (OWLS) to show that OmcA, an 85 kDa decaheme outer-membrane c-type cytochrome from Shewanella oneidensis MR-1, adsorbs to isostructural Al2O3 and Fe2O3 in similar amounts. Adsorption is ionic-strength and pH dependent (peak adsorption at pH 6.57.0). The thickness of the OmcA layer on Al2O3 at pH 7.0 [5.8 1.1 (2r) nm] from OWLS is similar, within error, to that observed using atomic force microscopy (4.8 2 nm). The highest adsorption density observed was 334 ng cm 2 (2.4 1012 molecules cm 2), corresponding to a monolayer or 9.9 nm diameter spheres or submonolayer coverage by smaller molecules. Direct electrochemistry of OmcA on Fe2O3 electrodes was observed using cyclic voltammetry, with cathodic peak potentials of 380 to 320 mV versus Ag/AgCl. Variations in the cathodic peak positions are speculatively attributed to redox-linked conformation change or changes in molecular orientation. OmcA can exchange electrons with ITO electrodes at higher current densities than with Fe2O3. Overall, OmcA can bind to and exchange electrons with several oxides, and thus its utility in fuel cells is not restricted to Fe2O3.

  18. An Ontology Design Pattern for Surface Water Features

    SciTech Connect (OSTI)

    Sinha, Gaurav; Mark, David; Kolas, Dave; Varanka, Dalia; Romero, Boleslo E; Feng, Chen-Chieh; Usery, Lynn; Liebermann, Joshua; Sorokine, Alexandre

    2014-01-01

    Surface water is a primary concept of human experience but concepts are captured in cultures and languages in many different ways. Still, many commonalities can be found due to the physical basis of many of the properties and categories. An abstract ontology of surface water features based only on those physical properties of landscape features has the best potential for serving as a foundational domain ontology. It can then be used to systematically incor-porate concepts that are specific to a culture, language, or scientific domain. The Surface Water ontology design pattern was developed both for domain knowledge distillation and to serve as a conceptual building-block for more complex surface water ontologies. A fundamental distinction is made in this on-tology between landscape features that act as containers (e.g., stream channels, basins) and the bodies of water (e.g., rivers, lakes) that occupy those containers. Concave (container) landforms semantics are specified in a Dry module and the semantics of contained bodies of water in a Wet module. The pattern is imple-mented in OWL, but Description Logic axioms and a detailed explanation is provided. The OWL ontology will be an important contribution to Semantic Web vocabulary for annotating surface water feature datasets. A discussion about why there is a need to complement the pattern with other ontologies, es-pecially the previously developed Surface Network pattern is also provided. Fi-nally, the practical value of the pattern in semantic querying of surface water datasets is illustrated through a few queries and annotated geospatial datasets.

  19. Biotransformation and Incorporation into Proteins along a Simulated Terrestrial Food Chain

    SciTech Connect (OSTI)

    Unrine, J.M., B.P. Jackson and W.A. Hopkins

    2007-01-01

    Selenium is an essential trace element in vertebrates, but there is a narrow concentration range between dietary requirement and toxicity threshold. Although a great deal is known about the biochemistry of Se from a nutritional perspective, considerably less attention has been focused on the specific biochemistry of Se as an environmental toxicant. Recent advances in hyphenated analytical techniques have provided the capability of quantifying specific chemical forms of Se in biological tissues as well as the distribution of Se among macromolecules. We applied liquid chromatography coupled to inductively coupled plasma mass spectrometry to investigate biotransformations of selenomethionine along a simulated terrestrial food chain consisting of selenomethionine exposed crickets (Acheta domesticus) fed to western fence lizards (Sceloporus occidentalis). Evidence was obtained for selenomethionine biotransformation as well as for sex-specific differences in the metabolism of Se compounds and their subsequent incorporation into proteins in the lizard. The results demonstrate the complexities involved in trophic transfer of Se due to the potential for extensive biotransformation and the species- and even sex-specific nature of these biotransformations.

  20. Biology and management of insect pests in North American intensively managed hardwood forest systems.

    SciTech Connect (OSTI)

    Coyle, David R.; Nebeker, T., E.; Hart, E., R.; Mattson, W., J.

    2005-01-01

    Annu. Rev. Entomol. 50:1-29. Abstract Increasing demand for wood and wood products is putting stress on traditional forest production areas, leading to long-term economic and environmental concerns. Intensively managed hardwood forest systems (IMHFS), grown using conventional agricultural as well as forestry methods, can help alleviate potential problems in natural forest production areas. Although IMHFS can produce more biomass per hectare per year than natural forests, the ecologically simplified, monocultural systems may greatly increase the crops susceptibility to pests. Species in the genera Populus and Salix comprise the greatest acreage in IMHFS in North America, but other species, including Liquidambar styracifua and Platanus occidentalis, are also important. We discuss life histories, realized and potential damage, and management options for the most economically infuential pests that affect these hardwood species. The substantial inherent challenges associated with pest management in the monocultural environments created by IMHFS are reviewed. Finally, we discuss ways to design IMHFS that may reduce their susceptibility to pests, increase their growth and productivity potential, and create a more sustainable environment.

  1. Ecological Monitoring and Compliance Program 2006 Report

    SciTech Connect (OSTI)

    David C. Anderson; Paul D. Greger; Derek B. Hall; Dennis J. Hansen; William K. Ostler

    2007-03-01

    The Ecological Monitoring and Compliance program (EMAC), funded through the U.S. Department of Energy, National Nuclear Security Administration Nevada Site Office (NNSA/NSO), monitors the ecosystem of the Nevada Test Site (NTS) and ensures compliance with laws and regulations pertaining to NTS biota. This report summarizes the program's activities conducted by National Security Technologies LLC (NSTec) during the Calendar Year 2006. Program activities included: (a) biological surveys at proposed construction sites, (b) desert tortoise compliance, (c) ecosystem mapping and data management, (d) sensitive plant species monitoring, (e) sensitive and protected/regulated animal monitoring, (f) habitat monitoring, (g) habitat restoration monitoring, and (h) monitoring of the Nonproliferation Test and Evaluation Complex (NPTEC). Sensitive and protected/regulated species of the NTS include 44 plants, 1 mollusk, 2 reptiles, over 250 birds, and 26 mammals protected, managed, or considered sensitive as per state or federal regulations and natural resource agencies and organizations. The threatened desert tortoise (Gopherus agassizii) is the only species on the NTS protected under the Endangered Species Act. Biological surveys for the presence of sensitive and protected/regulated species and important biological resources on which they depend were conducted for 34 projects. A total of 342.1 hectares (ha) (845.37 acres [ac]) was surveyed for these projects. Sensitive and protected/regulated species and important biological resources found included: 2 inactive tortoise burrows, 2 western burrowing owls (Athene cunicularia hypugaea), several horses (Equus caballus), 2 active predator burrows, mature Joshua trees (Yucca brevifolia), yuccas and cacti; and also 1 bird nest (2 eggs), 1 barn owl (Tyto alba) and 2 great-horned owls (Bubo virginianus). NSTec provided a written summary report of all survey findings and mitigation recommendations, where applicable. All flagged burrows were avoided during construction activities. Twenty one of the 34 projects had sites within the distribution range of the threatened desert tortoise. NNSA/NSO must comply with the terms and conditions of a permit (called a Biological Opinion) from the U.S. Fish and Wildlife Service (FWS) when conducting work in tortoise habitat. No tortoises were found in or displaced from project areas. No desert tortoises were accidentally injured or killed, nor were any captured or displaced from project sites. One desert tortoise was accidentally killed along a paved road. One site specific re-vegetation plan was submitted this year as required by the desert tortoise habitat re-vegetation plan approved in 2004. This year a total of 1.89 ha (4.69 ac) of tortoise habitat was disturbed. Re-vegetation of habitat at the Bren Tower burn was completed in the spring of 2006. In the summer of 2006, NSTec scientists prepared a Biological Assessment of the security activities that were being conducted at the Device Assembly Facility (DAF). NNSA requested a Biological Opinion from FWS in late 2006. Ecosystem mapping and data management in 2006 focused primarily on two tasks: (a) converting hardcopies of about 17 reports (EMAC annual reports and selected topical reports from 1996 to 2003) into electronic versions (Portable Document Format [PDF] files) to facilitate electronic document exchange, rapid retrieval, duplication, and printing, and (b) conducting an annual vegetation survey to determine wildland fire hazards on the NTS. Copies of the PDF documents were sent to DOE's Office of Scientific and Technical Information website in Oak Ridge, Tennessee, and the DOE National Nuclear Security Administration Nevada Site Office (NNSA/NSO) Public Reading Facility.

  2. Ecological Monitoring and Compliance Program 2006 Report

    SciTech Connect (OSTI)

    David C. Anderson; Paul D. Greger; Derek B. Hall; Dennis J. Hansen; William K. Ostler

    2007-03-01

    The Ecological Monitoring and Compliance program (EMAC), funded through the U.S. Department of Energy, National Nuclear Security Administration Nevada Site Office (NNSA/NSO), monitors the ecosystem of the Nevada Test Site (NTS) and ensures compliance with laws and regulations pertaining to NTS biota. This report summarizes the program's activities conducted by National Security Technologies LLC (NSTec) during the Calendar Year 2006. Program activities included: (a) biological surveys at proposed construction sites, (b) desert tortoise compliance, (c) ecosystem mapping and data management, (d) sensitive plant species monitoring, (e) sensitive and protected/regulated animal monitoring, (f) habitat monitoring, (g) habitat restoration monitoring, and (h) monitoring of the Nonproliferation Test and Evaluation Complex (NPTEC). Sensitive and protected/regulated species of the NTS include 44 plants, 1 mollusk, 2 reptiles, over 250 birds, and 26 mammals protected, managed, or considered sensitive as per state or federal regulations and natural resource agencies and organizations. The threatened desert tortoise (Gopherus agassizii) is the only species on the NTS protected under the Endangered Species Act. Biological surveys for the presence of sensitive and protected/regulated species and important biological resources on which they depend were conducted for 34 projects. A total of 342.1 hectares (ha) (845.37 acres [ac]) was surveyed for these projects. Sensitive and protected/regulated species and important biological resources found included: 2 inactive tortoise burrows, 2 western burrowing owls (Athene cunicularia hypugaea), several horses (Equus caballus), 2 active predator burrows, mature Joshua trees (Yucca brevifolia), yuccas and cacti; and also 1 bird nest (2 eggs), 1 barn owl (Tyto alba) and 2 great-horned owls (Bubo virginianus). NSTec provided a written summary report of all survey findings and mitigation recommendations, where applicable. All flagged burrows were avoided during construction activities. Twenty one of the 34 projects had sites within the distribution range of the threatened desert tortoise. NNSA/NSO must comply with the terms and conditions of a permit (called a Biological Opinion) from the U.S. Fish and Wildlife Service (FWS) when conducting work in tortoise habitat. No tortoises were found in or displaced from project areas. No desert tortoises were accidentally injured or killed, nor were any captured or displaced from project sites. One desert tortoise was accidentally killed along a paved road. One site specific revegetation plan was submitted this year as required by the desert tortoise habitat revegetation plan approved in 2004. This year a total of 1.89 ha (4.69 ac) of tortoise habitat was disturbed. Revegetation of habitat at the Bren Tower burn was completed in the spring of 2006. In the summer of 2006, NSTec scientists prepared a Biological Assessment of the security activities that were being conducted at the Device Assembly Facility (DAF). NNSA requested a Biological Opinion from FWS in late 2006. Ecosystem mapping and data management in 2006 focused primarily on two tasks: (a) converting hardcopies of about 17 reports (EMAC annual reports and selected topical reports from 1996 to 2003) into electronic versions (Portable Document Format [PDF] files) to facilitate electronic document exchange, rapid retrieval, duplication, and printing, and (b) conducting an annual vegetation survey to determine wildland fire hazards on the NTS.

  3. Species characterization and responses of subcortical insects to trap-logs and ethanol in a hardwood biomass plantation: Subcortical insects in hardwood plantations

    SciTech Connect (OSTI)

    Coyle, David R.; Brissey, Courtney L.; Gandhi, Kamal J. K.

    2015-01-02

    1. We characterized subcortical insect assemblages in economically important eastern cottonwood (Populus deltoides Bartr.), sycamore (Platanus occidentalis L.) and sweetgum (Liquidambar styraciflua L.) plantations in the southeastern U.S.A. Furthermore, we compared insect responses between freshly-cut plant material by placing traps directly over cut hardwood logs (trap-logs), traps baited with ethanol lures and unbaited (control) traps. 2. We captured a total of 15 506 insects representing 127 species in four families in 2011 and 2013. Approximately 9% and 62% of total species and individuals, respectively, and 23% and 79% of total Scolytinae species and individuals, respectively, were non-native to North America. 3. We captured more Scolytinae using cottonwood trap-logs compared with control traps in both years, although this was the case with sycamore and sweetgum only in 2013. More woodborers were captured using cottonwood and sweetgum trap-logs compared with control traps in both years, although only with sycamore in 2013. 4. Ethanol was an effective lure for capturing non-native Scolytinae; however, not all non-native species were captured using ethanol lures. Ambrosiophilus atratus (Eichhoff) and Hypothenemus crudiae (Panzer) were captured with both trap-logs and control traps, whereas Coccotrypes distinctus (Motschulsky) and Xyleborus glabratus Eichhoff were only captured on trap-logs. 5. Indicator species analysis revealed that certain scolytines [e.g. Cnestus mutilates (Blandford) and Xylosandrus crassiusculus (Motschulsky)] showed significant associations with trap-logs or ethanol baits in poplar or sweetgum trap-logs. In general, the species composition of subcortical insects, especially woodboring insects, was distinct among the three tree species and between those associated with trap-logs and control traps.

  4. Insights into bilaterian evolution from three spiralian genomes

    SciTech Connect (OSTI)

    Simakov, Oleg; Marletaz, Ferdinand; Cho, Sung-Jin; Edsinger-Gonzales, Eric; Havlak, Paul; Hellsten, Uffe; Kuo, Dian-Han; Larsson, Tomas; Lv, Jie; Arendt, Detlev; Savage, Robert; Osoegawa, Kazutoyo; de Jong, Pieter; Grimwood, Jane; Chapman, Jarrod A.; Shapiro, Harris; Otillar, Robert P.; Terry, Astrid Y.; Boore, Jeffrey L.; Grigoriev, Igor V.; Lindberg, David R.; Seaver, Elaine C.; Weisblat, David A.; Putnam, Nicholas H.; Rokhsar, Daniel S.; Aerts, Andrea

    2012-01-07

    Current genomic perspectives on animal diversity neglect two prominent phyla, the molluscs and annelids, that together account for nearly one-third of known marine species and are important both ecologically and as experimental systems in classical embryology1, 2, 3. Here we describe the draft genomes of the owl limpet (Lottia gigantea), a marine polychaete (Capitella teleta) and a freshwater leech (Helobdella robusta), and compare them with other animal genomes to investigate the origin and diversification of bilaterians from a genomic perspective. We find that the genome organization, gene structure and functional content of these species are more similar to those of some invertebrate deuterostome genomes (for example, amphioxus and sea urchin) than those of other protostomes that have been sequenced to date (flies, nematodes and flatworms). The conservation of these genomic features enables us to expand the inventory of genes present in the last common bilaterian ancestor, establish the tripartite diversification of bilaterians using multiple genomic characteristics and identify ancient conserved long- and short-range genetic linkages across metazoans. Superimposed on this broadly conserved pan-bilaterian background we find examples of lineage-specific genome evolution, including varying rates of rearrangement, intron gain and loss, expansions and contractions of gene families, and the evolution of clade-specific genes that produce the unique content of each genome.

  5. An evidential path logic for multi-relational networks

    SciTech Connect (OSTI)

    Rodriguez, Marko A; Geldart, Joe

    2008-01-01

    Multi-relational networks are used extensively to structure knowledge. Perhaps the most popular instance, due to the widespread adoption of the Semantic Web, is the Resource Description Framework (RDF). One of the primary purposes of a knowledge network is to reason; that is, to alter the topology of the network according to an algorithm that uses the existing topological structure as its input. There exist many such reasoning algorithms. With respect to the Semantic Web, the bivalent, axiomatic reasoners of the RDF Schema (RDFS) and the Web Ontology Language (OWL) are the most prevalent. However, nothing prevents other forms of reasoning from existing in the Semantic Web. This article presents a non-bivalent, non-axiomatic, evidential logic and reasoner that is an algebraic ring over a multi-relational network and two binary operations that can be composed to perform various forms of inference. Given its multi-relational grounding, it is possible to use the presented evidential framework as another method for structuring knowledge and reasoning in the Semantic Web. The benefits of this framework are that it works with arbitrary, partial, and contradictory knowledge while, at the same time, supporting a tractable approximate reasoning process.

  6. Metazoan Gene Families from Metazome

    DOE Data Explorer [Office of Scientific and Technical Information (OSTI)]

    Metazome is a joint project of the Department of Energy's Joint Genome Institute and the Center for Integrative Genomics to facilitate comparative genomic studies amongst metazoans. Clusters of orthologous and paralogous genes that represent the modern descendents of ancestral gene sets are constructed at key phylogenetic nodes. These clusters allow easy access to clade specific orthology/paralogy relationships as well as clade specific genes and gene expansions. As of version 2.0.4, Metazome provides access to twenty-four sequenced and annotated metazoan genomes, clustered at nine evolutionarily significant nodes. Where possible, each gene has been annotated with PFAM, KOG, KEGG, and PANTHER assignments, and publicly available annotations from RefSeq, UniProt, Ensembl, and JGI are hyper-linked and searchable. The included organisms (by common name) are: Human, Mouse, Rat, Dog, Opossum, Chicken, Frog, Stickleback, Medaka, Fugu pufferfish; Zebrafish, Seasquirt - savignyi, Seasquirt - intestinalis, Amphioxus, Sea Urchin, Fruitfly, Mosquite, Yellow Fever Mosquito, Silkworm, Red Flour Beetle, Worm, Briggsae Worm, Owl limpet (snail), and Sea anemone. [Copied from Metazome Overview at http://www.metazome.net/Metazome_info.php

  7. Ethanol Demand in United States Gasoline Production

    SciTech Connect (OSTI)

    Hadder, G.R.

    1998-11-24

    The Oak Ridge National Laboratory (OWL) Refinery Yield Model (RYM) has been used to estimate the demand for ethanol in U.S. gasoline production in year 2010. Study cases examine ethanol demand with variations in world oil price, cost of competing oxygenate, ethanol value, and gasoline specifications. For combined-regions outside California summer ethanol demand is dominated by conventional gasoline (CG) because the premised share of reformulated gasoline (RFG) production is relatively low and because CG offers greater flexibility for blending high vapor pressure components like ethanol. Vapor pressure advantages disappear for winter CG, but total ethanol used in winter RFG remains low because of the low RFG production share. In California, relatively less ethanol is used in CG because the RFG production share is very high. During the winter in California, there is a significant increase in use of ethanol in RFG, as ethanol displaces lower-vapor-pressure ethers. Estimated U.S. ethanol demand is a function of the refiner value of ethanol. For example, ethanol demand for reference conditions in year 2010 is 2 billion gallons per year (BGY) at a refiner value of $1.00 per gallon (1996 dollars), and 9 BGY at a refiner value of $0.60 per gallon. Ethanol demand could be increased with higher oil prices, or by changes in gasoline specifications for oxygen content, sulfur content, emissions of volatile organic compounds (VOCS), and octane numbers.

  8. Wind Development on Tribal Lands

    SciTech Connect (OSTI)

    Ken Haukaas; Dale Osborn; Belvin Pete

    2008-01-18

    Background: The Rosebud Sioux Tribe (RST) is located in south central South Dakota near the Nebraska border. The nearest community of size is Valentine, Nebraska. The RST is a recipient of several Department of Energy grants, written by Distributed Generation Systems, Inc. (Disgen), for the purposes of assessing the feasibility of its wind resource and subsequently to fund the development of the project. Disgen, as the contracting entity to the RST for this project, has completed all the pre-construction activities, with the exception of the power purchase agreement and interconnection agreement, to commence financing and construction of the project. The focus of this financing is to maximize the economic benefits to the RST while achieving commercially reasonable rates of return and fees for the other parties involved. Each of the development activities required and its status is discussed below. Land Resource: The Owl Feather War Bonnet 30 MW Wind Project is located on RST Tribal Trust Land of approximately 680 acres adjacent to the community of St. Francis, South Dakota. The RST Tribal Council has voted on several occasions for the development of this land for wind energy purposes, as has the District of St. Francis. Actual footprint of wind farm will be approx. 50 acres. Wind Resource Assessment: The wind data has been collected from the site since May 1, 2001 and continues to be collected and analyzed. The latest projections indicate a net capacity factor of 42% at a hub height of 80 meters. The data has been collected utilizing an NRG 9300 Data logger System with instrumentation installed at 30, 40 and 65 meters on an existing KINI radio tower. The long-term annual average wind speed at 65-meters above ground level is 18.2 mph (8.1 mps) and 18.7 mph (8.4 mps) at 80-meters agl. The wind resource is excellent and supports project financing.

  9. Preliminary results of wildcat drilling in Absaroka volcanic rocks, Hot Springs County, Wyoming

    SciTech Connect (OSTI)

    Bailey, M.H.; Sundell, K.A.

    1986-08-01

    Recent drilling of three remote, high-elevation wildcat wells has proven that excellent Paleozoic reservoirs are present at shallow depths beneath Eocene volcaniclastic rocks. The Tensleep and Madison Formations are fluid filled above an elevation of 8000 ft, and all Paleozoic formations exhibit shows of oil and gas. These prolific reservoir rocks have produced billions of barrels of oil from the adjacent Bighorn and Wind river basins, and they pinch out with angular unconformity against the base of the volcanics, providing enormous potential for stratigraphic oil accumulations. Vibroseis and portable seismic data have confirmed and further delineate large anticlines of Paleozoic rocks, which were originally discovered by detailed surface geologic mapping. These structures can be projected along anticlinal trends from the western Owl Creek Mountains to beneath the volcanics as well. The overlying volcanics are generally soft, reworked sediments. However, large, hard boulders and blocks of andesite-dacite, which were previously mapped as intrusives, are present and are the result of catastrophic landslide/debris flow. The volcanics locally contain highly porous and permeable sandstones and abundant bentonite stringers. Oil and gas shows were observed throughout a 2400-ft thick interval of the Eocene Tepee Trail and Aycross Formations. Shows were recorded 9100 ft above sea level in the volcanic rocks. A minimum of 10 million bbl of oil (asphaltum) and an undetermined amount of gases and lighter oils have accumulated within the basal volcanic sequence, based on the evaluation of data from two drill sites. Significant amounts of hydrocarbons have migrated since the volcanics were deposited 50 Ma. Large Laramide anticlines were partially eroded and breached into the Paleozoic formations and resealed by overlying volcanics with subsequent development of a massive tar seal.

  10. SU-E-T-51: Bayesian Network Models for Radiotherapy Error Detection

    SciTech Connect (OSTI)

    Kalet, A; Phillips, M; Gennari, J

    2014-06-01

    Purpose: To develop a probabilistic model of radiotherapy plans using Bayesian networks that will detect potential errors in radiation delivery. Methods: Semi-structured interviews with medical physicists and other domain experts were employed to generate a set of layered nodes and arcs forming a Bayesian Network (BN) which encapsulates relevant radiotherapy concepts and their associated interdependencies. Concepts in the final network were limited to those whose parameters are represented in the institutional database at a level significant enough to develop mathematical distributions. The concept-relation knowledge base was constructed using the Web Ontology Language (OWL) and translated into Hugin Expert Bayes Network files via the the RHugin package in the R statistical programming language. A subset of de-identified data derived from a Mosaiq relational database representing 1937 unique prescription cases was processed and pre-screened for errors and then used by the Hugin implementation of the Estimation-Maximization (EM) algorithm for machine learning all parameter distributions. Individual networks were generated for each of several commonly treated anatomic regions identified by ICD-9 neoplasm categories including lung, brain, lymphoma, and female breast. Results: The resulting Bayesian networks represent a large part of the probabilistic knowledge inherent in treatment planning. By populating the networks entirely with data captured from a clinical oncology information management system over the course of several years of normal practice, we were able to create accurate probability tables with no additional time spent by experts or clinicians. These probabilistic descriptions of the treatment planning allow one to check if a treatment plan is within the normal scope of practice, given some initial set of clinical evidence and thereby detect for potential outliers to be flagged for further investigation. Conclusion: The networks developed here support the use of probabilistic models into clinical chart checking for improved detection of potential errors in RT plans.

  11. Update on Washington initiatives on ecosystem management

    SciTech Connect (OSTI)

    Kostka, D.

    1995-12-01

    A biological {open_quotes}revolution{close_quotes} is in progress. Due to initiatives of the Clinton-Gore administration, biologists across the nation are trying to define and use a new concept called ecosystem management. {open_quotes}Ecosystem management{close_quotes} was born in the frustration of trying to deal with the spotted owl controversy in the Northwest. Biologists could not agree on what should be done. And the biologists and economists rarely got together to try to solve problems. Some astute individuals realized that to achieve a sustainable development, ecosystems would have to be managed on a much larger scale than merely small plots of lands. And people from many different backgrounds and disciplines would need to come together to find solutions. This paper will present the views of a Washington insider who has been a player (although too frequently a minor league player!) in administration initiatives to infuse ecosystem management principles and practices in our national conscience. Today, federal agency staff talk to those in other offices within their own agency. Federal agency staff also work on joint projects across federal agencies. In addition, state government, nonprofits, universities, interested individuals, and tribal governments are becoming involved. This is the biological {open_quotes}revolution{close_quotes} that is in progress. The emphasis is shifting from looking at the life history and problems of single species to a much broader approach of examining many species, including humans. The author will present a report on results of the ecosystem management initiative in the last year and point out some of the hurdles still ahead.

  12. SU-E-I-62: Assessing Radiation Dose Reduction and CT Image Optimization Through the Measurement and Analysis of the Detector Quantum Efficiency (DQE) of CT Images Using Different Beam Hardening Filters

    SciTech Connect (OSTI)

    Collier, J; Aldoohan, S; Gill, K

    2014-06-01

    Purpose: Reducing patient dose while maintaining (or even improving) image quality is one of the foremost goals in CT imaging. To this end, we consider the feasibility of optimizing CT scan protocols in conjunction with the application of different beam-hardening filtrations and assess this augmentation through noise-power spectrum (NPS) and detector quantum efficiency (DQE) analysis. Methods: American College of Radiology (ACR) and Catphan phantoms (The Phantom Laboratory) were scanned with a 64 slice CT scanner when additional filtration of thickness and composition (e.g., copper, nickel, tantalum, titanium, and tungsten) had been applied. A MATLAB-based code was employed to calculate the image of noise NPS. The Catphan Image Owl software suite was then used to compute the modulated transfer function (MTF) responses of the scanner. The DQE for each additional filter, including the inherent filtration, was then computed from these values. Finally, CT dose index (CTDIvol) values were obtained for each applied filtration through the use of a 100 mm pencil ionization chamber and CT dose phantom. Results: NPS, MTF, and DQE values were computed for each applied filtration and compared to the reference case of inherent beam-hardening filtration only. Results showed that the NPS values were reduced between 5 and 12% compared to inherent filtration case. Additionally, CTDIvol values were reduced between 15 and 27% depending on the composition of filtration applied. However, no noticeable changes in image contrast-to-noise ratios were noted. Conclusion: The reduction in the quanta noise section of the NPS profile found in this phantom-based study is encouraging. The reduction in both noise and dose through the application of beam-hardening filters is reflected in our phantom image quality. However, further investigation is needed to ascertain the applicability of this approach to reducing patient dose while maintaining diagnostically acceptable image qualities in a clinical setting.

  13. Research, Monitoring, and Evaluation of Avian Predation on Salmonid Smolts in the Lower and Mid-Columbia River, 2006 Final Season Summary.

    SciTech Connect (OSTI)

    Roby, Daniel D.; Collis, Ken; Lyons, Donald E.

    2009-06-18

    This study investigates predation by piscivorous waterbirds on juvenile salmonids (Oncorhynchus spp.) from throughout the Columbia River Basin. During 2006, study objectives in the Columbia River estuary, work funded by the Bonneville Power Administration, were to (1) monitor and evaluate previous management initiatives to reduce Caspian tern (Hydroprogne caspia) predation on juvenile salmonids (smolts); (2) measure the impact of double-crested cormorant (Phalacrocorax auritus) predation on smolt survival, and assess potential management options to reduce cormorant predation; and (3) monitor large colonies of other piscivorous waterbirds in the estuary (i.e., glaucous-winged/western gulls [Larus glaucescens/occidentalis]) to determine the potential impacts on smolt survival. Study objectives on the mid-Columbia River, work funded by the Walla Walla District of the U.S. Army Corps of Engineers, were to (1) measure the impact of predation by Caspian terns and double-crested cormorants on smolt survival; and (2) monitor large nesting colonies of other piscivorous waterbirds (i.e., California gulls [L. californicus], ring-billed gulls [L. delawarensis], American white pelicans [Pelecanus erythrorhynchos]) on the mid-Columbia River to determine the potential for significant impacts on smolt survival. Our efforts to evaluate system-wide losses of juvenile salmonids to avian predation indicated that Caspian terns and double-crested cormorants were responsible for the vast majority of smolt losses to avian predators in the Columbia Basin, with most losses occurring in the Columbia River estuary. In 2006, East Sand Island in the Columbia River estuary supported the largest known breeding colonies of Caspian terns and double-crested cormorants in the world. The Caspian tern colony on East Sand Island consisted of about 9,200 breeding pairs in 2006, up slightly (but not significantly so) from the estimate of colony size in 2005 (8,820 pairs). There has not been a statistically significant change in the size of the Caspian tern colony on East Sand Island since 2000. Tern nesting success averaged 0.72 fledglings per breeding pair in 2006, significantly higher than in 2005 (0.37 fledglings per breeding pair), a year of poor ocean conditions. Despite the presumably higher availability of marine forage fishes in 2006, the proportion of juvenile salmonids in diets of Caspian terns (32% of prey items) averaged higher than in 2005 (23% of prey items) and 2004 (18% of prey items). Steelhead smolts were particular vulnerable to predation by East Sand Island terns in 2006, with predation rates as high as 20% on particular groups of PIT-tagged fish reaching the estuary. Consumption of juvenile salmonids by terns nesting at the East Sand Island colony in 2006 was approximately 5.3 million smolts (95% c.i. = 4.4-6.2 million), significantly higher than the estimated 3.6 million smolts consumed in 2005, but still roughly 7 million fewer smolts consumed compared to 1998 (when all terns nested on Rice Island in the upper estuary). Caspian terns nesting on East Sand Island continue to rely primarily on marine forage fishes as a food supply, even in 2005 when availability of marine forage fishes declined due to poor ocean conditions. Further management of Caspian terns to reduce losses of juvenile salmonids would be implemented under the Caspian Tern Management Plan for the Columbia River Estuary; the Records of Decision (RODs) authorizing implementation of the plan were signed in November 2006. The ROD lists as the management goal the redistribution of approximately half of the East Sand Island Caspian tern colony to alternative colony sites in interior Oregon and San Francisco Bay, California (USFWS 2006). Implementation of the management plan is stalled, however, because of the lack of appropriated funds.