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1

Joint Genome Institute's Automation Approach and History  

E-Print Network [OSTI]

Joint Genome Institute’s Automation Approach and Historythroughput environment; – automation does not necessarilyissues “Islands of Automation” – modular instruments with

Roberts, Simon

2006-01-01T23:59:59.000Z

2

Microbial Genomics Data from the DOE Joint Genome Institute (JGI)  

DOE Data Explorer [Office of Scientific and Technical Information (OSTI)]

As of March 2008, The Joint Genome Institute has released 296 Prokaryotic microbial sites, with 216 in finished status.

3

Joint Genome Institute's Automation Approach and History  

SciTech Connect (OSTI)

Department of Energy/Joint Genome Institute (DOE/JGI) collaborates with DOE national laboratories and community users, to advance genome science in support of the DOE missions of clean bio-energy, carbon cycling, and bioremediation.

Roberts, Simon

2006-07-05T23:59:59.000Z

4

Joint Genome Institute (JGI) Projects at NERSC  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Joint Genome Institute Joint Genome Institute (JGI) Joint Genome Institute (JGI) nicole-illumina-flowcell.jpg Key Challenges: Ensuring that there is a robust computational infrastructure for managing, storing and gleaning scientific insights from the torrent of data that constantly flows from the advanced sequencing platforms at the Department of Energy Joint Genome Institute (JGI). JGI sequencing capacity exceeds 40 billion DNA base pairs per year and is growing at a rate that exceeds computer hardware improvements, with exponential increases in computation and storage needed. JGI will generate about 1 petabyte of data in their first year as a NERSC partner; this is expected to double each year. Why it Matters: JGI is the primary production sequencing facility for the DOE. By revealing the genetic blueprint and fundamental principles that

5

DOE Joint Genome Institute Completes Soybean Genome- Data Released to  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Press Release: December 8, 2008 Press Release: December 8, 2008 DOE Joint Genome Institute Completes Soybean Genome- Data Released to Advance Biofuel, Food, & Feed Research WALNUT CREEK, CA- The U.S. Department of Energy Joint Genome Institute (DOE JGI) has released a complete draft assembly of the soybean (Glycine max) genetic code, making it widely available to the research community to advance new breeding strategies for one of the world's most valuable plant commodities. Soybean not only accounts for 70 percent of the world's edible protein, but also is an emerging feedstock for biodiesel production. Soybean is second only to corn as an agricultural commodity and is the leading U.S. agricultural export. DOE JGI's interest in sequencing the soybean centers on its use for biodiesel, a renewable, alternative fuel with the highest energy content of

6

A Taste of Algal Genomes from the Joint Genome Institute  

SciTech Connect (OSTI)

Algae play profound roles in aquatic food chains and the carbon cycle, can impose health and economic costs through toxic blooms, provide models for the study of symbiosis, photosynthesis, and eukaryotic evolution, and are candidate sources for bio-fuels; all of these research areas are part of the mission of DOE's Joint Genome Institute (JGI). To date JGI has sequenced, assembled, annotated, and released to the public the genomes of 18 species and strains of algae, sampling almost all of the major clades of photosynthetic eukaryotes. With more algal genomes currently undergoing analysis, JGI continues its commitment to driving forward basic and applied algal science. Among these ongoing projects are the pan-genome of the dominant coccolithophore Emiliania huxleyi, the interrelationships between the 4 genomes in the nucleomorph-containing Bigelowiella natans and Guillardia theta, and the search for symbiosis genes of lichens.

Kuo, Alan; Grigoriev, Igor

2012-06-17T23:59:59.000Z

7

DOE Joint Genome Institute: Unraveling the Threads: Simplest cotton genome  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

December 19, 2012 December 19, 2012 Unraveling the Threads: Simplest cotton genome offers clues for fiber improvements From the stockings decorating mantles to the new outfits in display windows calling to shoppers, cotton is woven into the fabric of the holiday season. For bioenergy researchers, however, fiber composition matters more than color and texture as each cotton strand is composed of more than two dozen coils of cellulose, a target biomass for next-generation biofuels. In the December 20, 2012 edition of Nature, an international consortium of researchers from 31 institutions including a team from the U.S. Department of Energy Joint Genome Institute (DOE JGI) present a high-quality draft assembly of the simplest cotton (Gossypium raimondii) genome. Additionally,

8

DOE Joint Genome Institute: Soybean Genome Analysis Reveals Pathways for  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

January 13, 2010 January 13, 2010 Soybean Genome Analysis Reveals Pathways for Improving Biodiesel, Disease Resistance, and Reducing Waste Runoff WALNUT CREEK, CA-Soybean, one of the most important global sources of protein and oil, is now the first legume species with a published complete draft genome sequence. The sequence and its analysis appear in the January 14 edition of the journal Nature. The research team comprised 18 institutions, including the U.S. Department of Energy Joint Genome Institute (DOE JGI), the U.S. Department of Agriculture-Agricultural Research Service (USDA-ARS), Purdue University and the University of North Carolina at Charlotte. The DOE, National Science Foundation, USDA and United Soybean Board supported the research. helix made of soybeans

9

DOE Joint Genome Institute: New Genomic Model Defines Microbes by  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

September 8, 2009 September 8, 2009 New Genomic Model Defines Microbes by Diet-Provides Tool for Tracking Environmental Change WALNUT CREEK, CA-In line with the U.S. Department of Energy (DOE) interest in characterizing the biotic factors involved in global carbon cycling, the DOE Joint Genome Institute (JGI) characterizes a diverse array of plants, microorganisms, and the communities in which they reside to inform options for reducing and stabilizing atmospheric greenhouse gases. Through a novel genomic approach detailed in the September 7 online edition and on the cover September 14 of the journal Proceedings of the National Academy of Sciences, an international team of scientists led by the University of New South Wales and the DOE JGI demonstrates how the microbial diversity of the oceans can be analyzed without necessarily

10

DOE Joint Genome Institute: Genome of Simplest Animal Reveals Ancient  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

21, 2008 21, 2008 Genome of Simplest Animal Reveals Ancient Lineage, Confounding Array of Complex Capabilities WALNUT CREEK, CA-As Aesop said, appearances are deceiving-even in life's tiniest critters. From first detection in the 1880s, clinging to the sides of an aquarium, to its recent characterization by the U.S. Department of Energy Joint Genome Institute (DOE JGI), a simple and primitive animal, Trichoplax adhaerens, appears to harbor a far more complex suite of capabilities than meets the eye. The findings, reported in the August 21 online edition of the journal Nature, establish a group of organisms as a branching point of animal evolution and identify sets of genes, or a "parts list," employed by organisms that have evolved along particular branches.

11

Rooted in Wonder: Joint Genome Institute Study Reveals Amazing World  

Broader source: Energy.gov (indexed) [DOE]

Rooted in Wonder: Joint Genome Institute Study Reveals Amazing Rooted in Wonder: Joint Genome Institute Study Reveals Amazing World Underfoot Rooted in Wonder: Joint Genome Institute Study Reveals Amazing World Underfoot August 13, 2012 - 2:33pm Addthis By developing a better understanding of the microbes that affect the growth of other plants (crops like corn or wheat) researchers may be able to improve their growth -- or provide better care for them in times of drought. By developing a better understanding of the microbes that affect the growth of other plants (crops like corn or wheat) researchers may be able to improve their growth -- or provide better care for them in times of drought. Charles Rousseaux Charles Rousseaux Senior Writer, Office of Science What Is A Weed It's also known as a mouse-ear cress. The scientific name is Arababidopsis thaliana.

12

DOE Joint Genome Institute: Biofuel-Producing Bacteria, Insect Gut  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

June 29, 2009 June 29, 2009 Biofuel-Producing Bacteria, Insect Gut Microbes, ~ 70 other Projects Fill DOE Joint Genome Institute 2010 Pipeline WALNUT CREEK, CA-The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has selected 71 new genomic sequencing projects for its 2010 Community Sequencing Program (CSP)-a targeted sampling of the planet's biodiversity-to be characterized for bioenergy, climate, and environmental applications. JGI's Community Sequencing Program is the largest genomic sequencing effort in the world focused on nonmedical organisms, enabling scientists from universities and national laboratories to probe the hidden world of microbes and plants to tap nature's ingenuity for innovative solutions to the nation's major challenges in energy, climate, and environment. The

13

DOE Joint Genome Institute 2008 Progress Report  

E-Print Network [OSTI]

Stanford Human Genome Center (SHGC) began collaborating withscientific goals, and the JGI SHGC kept pace, focusing on

Gilbert, David

2009-01-01T23:59:59.000Z

14

Seventh Annual DOE Joint Genome Institute User Meeting Sponsored By  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Seventh Annual Seventh Annual DOE Joint Genome Institute User Meeting Sponsored By U.S. Department of Energy Office of Science March 20-22, 2012 Walnut Creek Marriott Walnut Creek, California Contents Speaker Presentations .......................................................................................................... 1 Poster Presentations ........................................................................................................... 13 Attendees ............................................................................................................................ 83 Author Index ....................................................................................................................... 89 Abstracts alphabetical by speaker

15

DOE Joint Genome Institute: Scientists Publish Complete Genetic Blueprint  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

January 28, 2009 January 28, 2009 Scientists Publish Complete Genetic Blueprint of Key Biofuels Crop WALNUT CREEK, CA-Scientists at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI) and several partner institutions have published the sequence and analysis of the complete genome of sorghum, a major food and fodder plant with high potential as a bioenergy crop. The genome data will aid scientists in optimizing sorghum and other crops not only for food and fodder use, but also for biofuels production. The comparative analysis of the sorghum genome appears in the January 29 edition of the journal Nature. Prized for its drought resistance and high productivity, sorghum is currently the second most prevalent biofuels crop in the United States, behind corn. Grain sorghum produces the same amount of ethanol per bushel

16

DOE Joint Genome Institute: DOE JGI Releases Expanded Version of  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

28, 2009 28, 2009 DOE JGI Releases Expanded Version of Phytozome.net: Clearinghouse for Comparative Plant Genomics Data WALNUT CREEK, CA-An enhanced version of Phytozome.net, a web portal for comparative plant genomics geared to advance biofuel, food, feed, and fiber research, has been released by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI). Phytozome provides a central "hub" for web access to a rapidly growing number of plant genomes, and includes tools for visualization of plant genomes and associated annotations, sequence analysis, and bulk, as well as targeted, plant data retrieval. The gene families available in Phytozome, defined at several evolutionarily significant epochs, provide a framework for the transfer of functional information to important biofuel and

17

DOE Joint Genome Institute: DNA of Uncultured Organisms Sequenced Using  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

21, 2009 21, 2009 DNA of Uncultured Organisms Sequenced Using Novel Single-Cell Approach Download a Podcast of this Release! WALNUT CREEK, CA-Scientists from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI) and the Bigelow Laboratory for Ocean Sciences have assembled high quality, contamination-free draft genomes of uncultured biodegrading microorganisms using a novel single cell genome sequencing approach. This proof of principle study, published in the April 23 edition of the journal PLoS One, offers researchers a new method to access and decipher the information embedded in genomes of interest with only minute quantities of DNA. "Most of the microbial genomes sequenced to date are derived from organisms cultured in the laboratory," said DOE JGI Director Eddy Rubin.

18

DOE Joint Genome Institute: Next Gen Sequencing Technology Pinpoint  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

February 12, 2009 February 12, 2009 Next Gen Sequencing Technology Pinpoint "On-Off Switches" in Genomes WALNUT CREEK, CA-Scientists from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), Lawrence Berkeley National Laboratory, and the University of California, San Diego have developed a set of molecular tools that provide important insight into the complex genomes of multicellular organisms. The strategy promises to clarify the longstanding mystery of the role played by vast stretches of DNA sequence that do not code for the functional units-genes-that nevertheless may have a powerful regulatory influence. The research is described in the 12 February edition of the journal Nature. DOE bioenergy researchers have an interest in identifying these regulatory

19

Eukaryotic Genomics Data from the DOE Joint Genome Institute (JGI)  

DOE Data Explorer [Office of Scientific and Technical Information (OSTI)]

From the JGI webportal users can choose Eukaryotic genomes from a photo list, access the JGI FTP directories to download data files, use the Tree of Life navigation tool, or choose a genome and go directly to a website specific to that one genome. The individual sites include direct access to download sequence files, BLAST, search, view and navigate the genomic annotations.

20

DOE Joint Genome Institute: Adaptable Button Mushroom Serves Up  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

8, 2012 8, 2012 Adaptable Button Mushroom Serves Up Biomass-Degrading Genes Critical to Managing the Planet's Carbon Stores The button mushroom occupies a prominent place in our diet and in the grocery store where it boasts a tasty multibillion-dollar niche, while in nature, Agaricus bisporus is known to decay leaf matter on the forest floor. Now, owing to an international collaboration of two-dozen institutions led by the French National Institute for Agricultural Research (INRA) and the U.S. Department of Energy Joint Genome Institute (DOE JGI), the full repertoire of A. bisporus genes has been determined. In particular, new work shows how its genes are actually deployed not only in leaf decay but also wood decay and in the development of fruiting bodies (the above ground part of the mushroom harvested for food). The work also

Note: This page contains sample records for the topic "joint genome institute" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


21

DOE Joint Genome Institute: Establishing Standard Definitions for Genome  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

October 8, 2009 October 8, 2009 Establishing Standard Definitions for Genome Sequences Download a podcast of this release! WALNUT CREEK, CA-In 1996, researchers from major genome sequencing centers around the world convened on the island of Bermuda and defined a finished genome as a gapless sequence with a nucleotide error rate of one or less in 10,000 bases. This effectively set the quality target for the human genome effort and was quickly applied to other genome projects. If a genome sequence didn't meet this stringent criterion, it was simply considered a "draft." More than a decade later, researchers are finding that with the advent of the latest sequencing technologies the terms "draft" and "finished" are no longer sufficient to describe the varying levels of genome sequence

22

DOE Joint Genome Institute: Breaking down cellulose without blasting  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

4, 2011 4, 2011 Breaking down cellulose without blasting lignin: "Dry rot" genome offers lessons for biofuel pretreatment WALNUT CREEK, Calif.-Feared by realtors and homeowners alike, dry rot due to the fungus Serpula lacrymans causes millions of dollars worth of damage to homes and buildings around the world. This brown rot fungus' capacity to break down the cellulose in wood led to its selection for sequencing by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI) in 2007, with the goal of identifying the enzymes involved in the degradation process and using the information to improve cellulosic biofuels production. Photo: A variant of Serpula lacrymans causes dry rot. (Dave Brown via Flickr/Creative Commons Attribution 2.0) As reported online July 14 in Science Express, an international team of

23

DOE Joint Genome Institute: DOE JGI Announces 2011 Community Sequencing  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

October 4, 2010 October 4, 2010 Bigger is Better: DOE JGI Announces 2011 Community Sequencing Program Portfolio The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has selected 35 new genomic sequencing projects for its 2011 Community Sequencing Program (CSP)-a targeted sampling of the planet's biodiversity-to be characterized for bioenergy and environmental applications. A sample of CSP 2011 projects *[see photo credits below] Supported by the Office of Biological and Environmental Research in the DOE Office of Science, the DOE JGI's Community Sequencing Program enables scientists from universities and national laboratories around the world to probe the hidden world of microbes and plants for innovative solutions to the nation's major challenges in energy, climate, and environment. This

24

DOE Joint Genome Institute: Model Microbial Community for Studying  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

October 22, 2009 October 22, 2009 Model Microbial Community for Studying Expanding Dead Zones Characterized WALNUT CREEK, CA-Among the many changes in the ocean is the expansion of oxygen-deficient or oxygen minimum zones (OMZs), also known as dead zones, which affect the processes by which carbon is captured and sequestered on the seafloor and alter the microbial activities that impact the rate and magnitude of ocean carbon sequestration. Despite the importance of these effects, very little is known about the metabolism of OMZ microbes and how they respond to environmental changes. In the Oct. 23 issue of the journal Science, researchers from the University of British Columbia and the U.S. Department of Energy Joint Genome Institute (DOE JGI) describe the metagenome of an abundant but

25

DOE Joint Genome Institute: Peach Genome Offers Insights into Breeding  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

March 24, 2013 March 24, 2013 Peach Genome Offers Insights into Breeding Strategies for Biofuels Crops Rapidly growing trees like poplars and willows are candidate "biofuel crops" from which it is expected that cellulosic ethanol and higher energy content fuels can be efficiently extracted. Domesticating these crops requires a deep understanding of the physiology and genetics of trees, and scientists are turning to long-domesticated fruit trees for hints. The relationship between a peach and a poplar may not be obvious at first glance, but to botanists both trees are part of the rosid superfamily, which includes not only fruit crops like apples, strawberries, cherries, and almonds, but many other plants as well, including rose that gives the superfamily its name.

26

DOE Joint Genome Institute | U.S. DOE Office of Science (SC)  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

DOE Joint Genome Institute DOE Joint Genome Institute Biological and Environmental Research (BER) BER Home About Research Research Abstracts Searchable Archive of BER Highlights External link Biological Systems Science Division (BSSD) Genomic Science DOE Bioenergy Research Centers Radiochemistry & Imaging Instrumentation Radiobiology: Low Dose Radiation Research DOE Human Subjects Protection Program Structural Biology DOE Joint Genome Institute Climate and Environmental Sciences Division (CESD) Facilities Science Highlights Benefits of BER Funding Opportunities Biological & Environmental Research Advisory Committee (BERAC) News & Resources Contact Information Biological and Environmental Research U.S. Department of Energy SC-23/Germantown Building 1000 Independence Ave., SW Washington, DC 20585 P: (301) 903-3251 F: (301)

27

U.S Department of Energy Joint Genome Institute Progress Report  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

S Department of Energy S Department of Energy Joint Genome Institute Progress Report 2009 Representatives of the four DOE JGI genome programs (plant, fungal, metagenome, and microbe) grace the cover of this annual report. Three of the organisms were among the 81 projects selected in 2009 for the 2010 Community Sequencing Program portfolio. Photo credits, clockwise from bottom left: Brachypodium distachyon by Roy Kaltschmidt, LBNL; Amanita thiersii fungus by Joe McFarland; Cow rumen metagenome by Gemma Henderson, AgResearch; Soybeans by Roy Kaltschmidt, LBNL; Zymomonas mobilis Z4 by Katherine Pappas, University of Athens U.S Department of Energy Joint Genome Institute Progress Report 2009 DOE JGI Mission . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6 Director's

28

DOE Joint Genome Institute. Relative Reference: Foxtail Millet Offers Clues  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

May 14, 2012 May 14, 2012 Relative Reference: Foxtail Millet Offers Clues for Assembling the Switchgrass Genome Arranging DNA fragments into a genome sequence that scientists can interpret is a challenge often compared to assembling a puzzle, except there is no box to provide an idea of what the picture is even supposed to be. Sometimes there's guidance in the form of other publicly-available DNA sequences from related organisms that can be used to guide the assembly process, but its usefulness depends on how closely related any two sequences are to one another. For example, a reference genome might be so distantly related from the one being assembled, it would be akin to comparing a Model-T to a contemporary hybrid car. Foxtail millet Photo: Foxtail millet (S. italica) panicle by Katrien Devos, University of

29

DOE Joint Genome Institute: A DOE Office of Science User Facility of  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

DOE Joint Genome Institute DOE Joint Genome Institute Latest News R. irregularis December 20, 2013 A gluttonous plant reveals how its cellular power plant devours foreign DNA. Amborella trichopoda, a sprawling shrub that grows on just a single island in the remote South Pacific, is the only plant in its family and genus. It is also one of the oldest flowering plants, having branched off from others about 200 million years ago. more... R. irregularis November 25, 2013 How Scavenging Fungi Became a Plant's Best Friend. Glomeromycota is an ancient lineage of fungi that has a symbiotic relationship with roots that goes back nearly 420 million years to the earliest plants. More than two thirds of the world's plants depend on this soil-dwelling symbiotic fungus to survive, including critical agricultural crops such as wheat,

30

U.S. Department of Energy Joint Genome Institute Progress Report  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

U.S. Department of Energy Joint Genome Institute Progress Report Sequencing the world of possibilities for energy and the environment Table of Contents DOE JGI Mission ........................................................ 7 Director's Perspective.................................................... 8 DOE Mission Areas ................................................... 12 By the Numbers.......................................................... 14 User Map ............................................................ 15 Scientific Literature/Impact ................................ 16 DOE JGI Sequence Output .............................. 17 DOE JGI Team Science Realized ....................... 18 DOE JGI User Community ............................... 19 User Meeting 5 ...........................................................

31

DOE Joint Genome Institute: Same Fungus, Different Strains: A Comparative  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

3, 2011 3, 2011 Same Fungus, Different Strains: A Comparative Genomics Approach for Improved "Green" Chemical Production WALNUT CREEK, Calif.-Fungi play key roles in nature and are valued for their great importance in industry. Consider citric acid, a key additive in several foods and pharmaceuticals produced on a large-scale basis for decades with the help of the filamentous fungus Aspergillus niger. While A. niger is an integral player in the carbon cycle, it possesses an arsenal of enzymes that can be deployed in breaking down plant cell walls to free up sugars that can then be fermented and distilled into biofuel, a process being optimized by U.S. Department of Energy researchers. Susannah Tringe Photo: Aspergillus niger conidiospore by Kathie T. Hodges, Cornell.

32

JGI Visiting Scientist Program The DOE Joint Genome Institute Visiting Scientist Program (VSP)  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Visiting Scientist Program Visiting Scientist Program The DOE Joint Genome Institute Visiting Scientist Program (VSP) provides an opportunity for researchers who are seeking to build upon their line of scientific inquiry by leveraging JGI experimental, computational, and personnel resources for genomic research and sequence-based science. Projects include de novo generation of genome data, assistance in interpreting and/or building on an existing data set, or the refining of new technology (e.g., single-cell genomics; metagenomics, etc.). Length of stay depends on complexity of the project being considered and availability of data and other resources. Investigators, post docs, and graduate students participating in approved JGI User Projects are also invited to apply for on-site access to JGI

33

DOE Joint Genome Institute: Genes from Tiny Algae Shed Light on Big Role  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

April 9, 2009 April 9, 2009 Genes from Tiny Algae Shed Light on Big Role Managing Carbon in World's Oceans & Coping with Environmental Change WALNUT CREEK, CA-Scientists from two-dozen research organizations led by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI) and the Monterey Bay Aquarium Research Institute (MBARI) have decoded genomes of two algal strains, highlighting the genes enabling them to capture carbon and maintain its delicate balance in the oceans. These findings, from a team led by Alexandra Z. Worden of MBARI and published in the April 10 edition of the journal Science, will illuminate cellular processes related to algae-derived biofuels being pursued by DOE scientists. The study sampled two geographically diverse isolates of the photosynthetic

34

Illumina Production Sequencing at the DOE Joint Genome Institute - Workflow and Optimizations  

SciTech Connect (OSTI)

The U.S. Department of Energy (DOE) Joint Genome Institute?s (JGI) Production Sequencing group is committed to the generation of high-quality genomic DNA sequence to support the DOE mission areas of renewable energy generation, global carbon management, and environmental characterization and clean-up. Within the JGI?s Production Sequencing group, the Illumina Genome Analyzer pipeline has been established as one of three sequencing platforms, along with Roche/454 and ABI/Sanger. Optimization of the Illumina pipeline has been ongoing with the aim of continual process improvement of the laboratory workflow. These process improvement projects are being led by the JGI?s Process Optimization, Sequencing Technologies, Instrumentation& Engineering, and the New Technology Production groups. Primary focus has been on improving the procedural ergonomics and the technicians? operating environment, reducing manually intensive technician operations with different tools, reducing associated production costs, and improving the overall process and generated sequence quality. The U.S. DOE JGI was established in 1997 in Walnut Creek, CA, to unite the expertise and resources of five national laboratories? Lawrence Berkeley, Lawrence Livermore, Los Alamos, Oak Ridge, and Pacific Northwest ? along with HudsonAlpha Institute for Biotechnology. JGI is operated by the University of California for the U.S. DOE.

Tarver, Angela; Fern, Alison; Diego, Matthew San; Kennedy, Megan; Zane, Matthew; Daum, Christopher; Hack, Christopher; Tang, Eric; Deshpande, Shweta; Cheng, Jan-Fang; Roberts, Simon; Alexandre, Melanie; Harmon-Smith, Miranda; Lucas, Susan

2010-06-18T23:59:59.000Z

35

DOE Joint Genome Institute. Pulp NonFiction: Fungal Analysis Reveals Clues  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

March 22, 2012 March 22, 2012 Pulp NonFiction: Fungal Analysis Reveals Clues for Targeted Biomass Deconstruction Without fungi and microbes to break down dead trees and leaf litter in nature, the forest floor might look like a scene from TV's "Hoarders." Ceriporiopsis subvermispora mycelium on wood Photo: Scanning electron micrograph of Ceriporiopsis subvermispora mycelium on wood. (R. Blanchette, University of Minnesota) Massive-scale genome sequencing projects supported by the U.S. Department of Energy (DOE) and being carried out at the DOE Joint Genome Institute (JGI) highlight the importance of learning how the cellulose, hemicellulose and lignin that serve as a plant's infrastructure can be broken down by these forest organisms to extract needed nutrients. Among the fungi being

36

DOE Joint Genome Institute: A DOE Office of Science User Facility of  

Broader source: All U.S. Department of Energy (DOE) Office Webpages

MyJGISubmit ProposalsInternalEmergency InfoCareers MyJGISubmit ProposalsInternalEmergency InfoCareers JGI website People Go Genomes Project List User Programs Sequencing Informatics Systems Education News & Publications Events About Us JGI Home DOE Joint Genome Institute Latest News R. irregularis December 20, 2013 A gluttonous plant reveals how its cellular power plant devours foreign DNA. Amborella trichopoda, a sprawling shrub that grows on just a single island in the remote South Pacific, is the only plant in its family and genus. It is also one of the oldest flowering plants, having branched off from others about 200 million years ago. more... R. irregularis November 25, 2013 How Scavenging Fungi Became a Plant's Best Friend. Glomeromycota is an ancient lineage of fungi that has a symbiotic relationship with roots that

37

DOE Joint Genome Institute: Making up the gut microbiome is a host-driven  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

November 16, 2010 November 16, 2010 Making up the gut microbiome is a host-driven project Baking sourdough bread requires a starter, and so do mammalian guts, which are first colonized by microbial communities from the mother and then acquire more microbes over time. These gut microbial communities are important for maintaining health and combating disease, and it's why the Human Microbiome Project launched by the National Institutes of Health in 2008 is studying the microbial communities that populate the human body by sequencing them and assembling a reference catalog, a project that involves researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI). G. beringei Photo: G. beringei by rbleib While the HMP was getting off the ground, DOE JGI collaborator Howard

38

DOE Joint Genome Institute: Tringe on Popular Science's "Brilliant 10"  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

6, 2011 6, 2011 Tringe on Popular Science's "Brilliant 10" List WALNUT CREEK, Calif.-Susannah Green Tringe of the DOE Joint Genome Institute (DOE JGI) has been named one of 2011's "Brilliant 10," the annual list compiled by Popular Science magazine of top young researchers. In adding her name to the list, which appears in the October issue, the magazine recognized her $2.5 million grant from the DOE Early Career Research Program to study the role of microbial communities in restored wetlands in the San Francisco Bay-Delta region of California and their impact on long-term carbon sequestration. Bigelow's Dashiell Masland working Photo: Tringe wading into the Brilliant 10 list The Popular Science Brilliant 10 recognizes scientists and researchers

39

First Annual U.S. Department of Energy Office of Science Joint Genome Institute User Meeting  

E-Print Network [OSTI]

dc4el@u.washington.edu Samuel Pitluck DOE Joint Genome29 Pitluck, Sam ..14 Plugge,3 Sanjay Israni, 3 Sam Pitluck, 3 Miriam L. Land, 4 Frank W.

Various

2006-01-01T23:59:59.000Z

40

DOE Joint Genome Institute: Mite-y Genomic Resources For Bioenergy Crop  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

23, 2011 23, 2011 Mite-y Genomic Resources For Bioenergy Crop Protection WALNUT CREEK/BERKELEY, Calif.-For a pest that isn't quite the size of a comma on a keyboard, the two-spotted spider mite can do a disproportionate amount of damage. These web-spinners extract the nutrients they need from leaves of more than a thousand different plant species, including bioenergy feedstocks and food staples. The cost of chemically controlling spider mites to counteract reduced harvest yields hovers around $1 billion annually, reflecting their significant economic impact. spider mite Photo: The web-spinning two-spotted spider mite was sequenced at the DOE JGI. (M. Grbic) With a 90-million nucleotide genome, the smallest of those that belong to the group of animals with external skeletons or arthropods, the two-spotted

Note: This page contains sample records for the topic "joint genome institute" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


41

DOE Joint Genome Institute: Beyond Genomics-DOE JGI leads method  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

September 20, 2010 September 20, 2010 Beyond Genomics-DOE JGI leads method validation effort in Metatranscriptomics Ultra-high throughput DNA sequencing platforms that allow researchers to sequence the genetic code of organisms at lightning speed for just pennies are enabling more focused genomic studies on a massive scale. One example involves the transcriptome, a tiny but complex fraction of the complete genetic sequence that is transcribed into different types of RNA molecules. These molecules provide researchers with information about what genes are turned on and off under various conditions, and what the functions of these genes are. Researchers focus on the messenger RNA (mRNA), which transfer the genetic information from the DNA to functional proteins. The bulk of cellular RNA

42

Robotic Enrichment Processing of Roche 454 Titanium Emlusion PCR at the DOE Joint Genome Institute  

SciTech Connect (OSTI)

Enrichment of emulsion PCR product is the most laborious and pipette-intensive step in the 454 Titanium process, posing the biggest obstacle for production-oriented scale up. The Joint Genome Institute has developed a pair of custom-made robots based on the Microlab Star liquid handling deck manufactured by Hamilton to mediate the complexity and ergonomic demands of the 454 enrichment process. The robot includes a custom built centrifuge, magnetic deck positions, as well as heating and cooling elements. At present processing eight emulsion cup samples in a single 2.5 hour run, these robots are capable of processing up to 24 emulsion cup samples. Sample emulsions are broken using the standard 454 breaking process and transferred from a pair of 50ml conical tubes to a single 2ml tube and loaded on the robot. The robot performs the enrichment protocol and produces beads in 2ml tubes ready for counting. The robot follows the Roche 454 enrichment protocol with slight exceptions to the manner in which it resuspends beads via pipette mixing rather than vortexing and a set number of null bead removal washes. The robotic process is broken down in similar discrete steps: First Melt and Neutralization, Enrichment Primer Annealing, Enrichment Bead Incubation, Null Bead Removal, Second Melt and Neutralization and Sequencing Primer Annealing. Data indicating our improvements in enrichment efficiency and total number of bases per run will also be shown.

Hamilton, Matthew; Wilson, Steven; Bauer, Diane; Miller, Don; Duffy-Wei, Kecia; Hammon, Nancy; Lucas, Susan; Pollard, Martin; Cheng, Jan-Fang

2010-05-28T23:59:59.000Z

43

DOE Joint Genome Institute: Sentinel of Change: Water Flea Genome to  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

February 3, 2011 February 3, 2011 Sentinel of Change: Water Flea Genome to Improve Environmental Monitoring Capabilities WALNUT CREEK, Calif.-A tiny crustacean that has been used for decades to develop and monitor environmental regulations is the first of its kind to have its genetic code sequenced and analyzed-revealing the most gene-packed animal characterized to date. The information deciphered could help researchers develop and conduct real-time monitoring systems of the effects of environmental remediation efforts. Daphnia pulex (commonly called water flea) Photo: Dr. Jan Michels, Christian-Albrechts-University, Kiel Daphnia pulex (commonly called water flea) Considered a keystone species in freshwater ecosystems, the water flea, Daphnia pulex, is roughly the size of the equal sign on a keyboard. Its 200

44

Joint Theory Institute  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Program General Info Program General Info Registration Info Directions to Argonne Dynamics of Symmetry Breaking A Workshop sponsored by the ANL/UChicago Joint Theory Institute April 13-17, 2009 Argonne National Laboratory, IL The Joint Theory Institute (JTI) is a multi-disciplinary research institution jointly supported at the University of Chicago and Argonne National Laboratory to enhance collaborative research between both institutions in the broad area of theory. This year JTI sponsors a workshop the aim of which is to explore the dynamics of symmetry breaking in a broad range of systems from nuclear physics to string theory, using theoretical insights such as Dyson-Schwinger equations formalism, gauge/gravity duality and lattice QCD. We will focus on systems which exhibit dynamical symmetry breaking and will cover topics essential for understanding nonperturbative QCD and physics of quark-gluon plasma.

45

DOE Joint Genome Institute: DOE JGI Produces New QC Tool for Microbial  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

May 24, 2010 May 24, 2010 DOE JGI Produces New QC Tool for Microbial Genomes WALNUT CREEK, CA-More than a thousand microbial genomes have been sequenced at various sequencing centers in the past 15 years to better understand their roles in tasks ranging from bioenergy to health to environmental cleanup. Conservative estimates suggest roughly 10,000 microbial genomes will be publicly available within the next two years, but genomic standards have not caught up with the technological advances that have made the sequencing process faster and cheaper. As a result, the torrent of DNA sequences being released has varying levels of quality, which impacts researchers' ability to use this information. To assist in checking the quality of the microbial genomic DNA sequences generated before they are submitted to the federally funded public archive

46

First Annual U.S. Department of Energy Office of Science Joint Genome Institute User Meeting  

E-Print Network [OSTI]

solvents tetrachloroethene (PCE) and trichloroethene (TCE),PCBs. The genome of the PCE-dechlorinating D. ethenogenesin D. ethenogenes grown on PCE or TCE by qPCR showed high

Various

2006-01-01T23:59:59.000Z

47

DOE Joint Genome Institute: First Wild Grass Species and Model System for  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

February 10, 2010 February 10, 2010 First Wild Grass Species and Model System for Energy Crops Sequenced WALNUT CREEK, CA-As the U.S. Department of Energy (DOE) works toward developing sustainable sources of clean renewable energy, perennial grasses have emerged as major candidates for the commercial production of cellulosic biofuels from feedstocks. However, little is known about the specific biological traits of the grasses that might contribute to their usefulness for energy production, in part because such grasses typically have long lifecycles and possess large, complex genomes, making them difficult to study. Representative genomes for two of the three major subfamilies of grasses-those that include rice, maize, sorghum and sugar cane-have already been sequenced. Now in the February 11 edition of the journal

48

DOE Joint Genome Institute: Fungal Map of Mutations Key to Increasing  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

September 1, 2009 September 1, 2009 Fungal Map of Mutations Key to Increasing Enzyme Production for Bioenergy Use Download a podcast of this release! WALNUT CREEK, CA-In half a century, one fungus has gone from being the bane of the Army quartermasters' existence in the Pacific to industry staple and someday, as part of the U.S. Department of Energy's mission to promote national energy security through clean, renewable energy development, a biofuel producers' best friend. Trichoderma reesei's makeover is due in part to scientific explorations that led to the development of mutant fungal strains that produce large quantities of biomass-degrading enzymes. T. reesei Image: T. reesei, courtesy of Irma Salovuori, VTT Biotechnology Now an international team of researchers led by scientists at the DOE Joint

49

Joint Institute for High Temperatures  

National Nuclear Security Administration (NNSA)

Joint Institute for High Temperatures of Russian Academy of Sciences Moscow Institute of Physics and Technology Extended title Extended title Excited state of warm dense matter or Exotic state of warm dense matter or Novel form of warm dense matter or New form of plasma Three sources of generation similarity: solid state density, two temperatures: electron temperature about tens eV, cold ions keep original crystallographic positions, but electron band structure and phonon dispersion are changed, transient but steady (quasi-stationary for a short time) state of non-equilibrium, uniform plasmas (no reference to non-ideality, both strongly and weakly coupled plasmas can be formed) spectral line spectra are emitted by ion cores embedded in plasma environment which influences the spectra strongly,

50

Institute for Plant Genomics and Biotechnology GENOMICS AND BIOTECHNOLOGY  

E-Print Network [OSTI]

Institute for Plant Genomics and Biotechnology GENOMICS AND BIOTECHNOLOGY A multidisciplinary organization, the Institute for Plant Genomics and Biotechnology is a composed of faculty members representing projects at the Institute for Plant Genomics and Biotechnology include the development of transgenic plants

51

Joint Institute for Neutron Sciences | ornl.gov  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Joint Institute for Neutron Sciences SHARE Joint Institute for Neutron Sciences JINS is located on Chestnut Ridge within the 80-acre SNS site, part of Oak Ridge National...

52

Joint Global Change Research Institute | Open Energy Information  

Open Energy Info (EERE)

Global Change Research Institute Global Change Research Institute Jump to: navigation, search Logo: Joint Global Change Research Institute Name Joint Global Change Research Institute Agency/Company /Organization Pacific Northwest National Laboratory Sector Energy, Land Focus Area Energy Efficiency Topics Policies/deployment programs, Resource assessment, Pathways analysis Website http://www.globalchange.umd.ed References Global Change Research Institute [1] Abstract The Joint Global Change Research Institute (JGCRI) houses an interdisciplinary team dedicated to understanding the problems of global climate change and their potential solutions. Joint Institute staff bring decades of experience and expertise to bear in science, technology, economics, and policy. "The Joint Global Change Research Institute (JGCRI) houses an

53

Addressing the Need for Alternative Transportation Fuels: The Joint BioEnergy Institute  

E-Print Network [OSTI]

Fuels: The Joint BioEnergy Institute Harvey W. Blanch †,‡,§,¶, * † Joint BioEnergy Institute, ‡ Department of Chemicalbiomass monomers. The Joint BioEnergy Institute (JBEI) is a

Blanch, Harvey

2010-01-01T23:59:59.000Z

54

The institutional needs of joint implementation projects  

SciTech Connect (OSTI)

In this paper, the authors discuss options for developing institutions for joint implementation (JI) projects. They focus on the tasks which are unique to JI projects or require additional institutional needs--accepting the project by the host and investor countries and assessing the project`s greenhouse gas (GHG) emission reduction or sequestration--and they suggest the types of institutions that would enhance their performance. The evaluation is based on four sets of governmental and international criteria for JI projects, the experiences of ten pilot JI projects, and the perspectives of seven collaborating authors from China, Egypt, India, Mexico, and Thailand, who interviewed relevant government and non-government staff involved in JI issue assessment in their countries. After examining the roles for potential JI institutions, they present early findings arguing for a decentralized national JI structure, which includes: (1) national governmental panels providing host country acceptance of proposed JI projects; (2) project parties providing the assessment data on the GHG reduction or sequestration for the projects; (3) technical experts calculating these GHG flows; (4) certified verification teams checking the GHG calculations; and (5) members of an international JI Secretariat training and certifying the assessors, as well as resolving challenges to the verifications. 86 refs.

Watt, E.; Sathaye, J. [Lawrence Berkeley Lab., CA (United States); Buen, O. de; Masera, O. [National Univ. of Mexico, Mexico City (Mexico); Gelil, I.A. [Organization of Energy Conservation and Planning, Cairo (Egypt); Ravindranath, N.H. [Indian Inst. of Science, Bangalore (India); Zhou, D.; Li, J. [Energy Research Inst., Beijing (China); Intarapravich, D. [Thailand Environmental Inst., Bangkok (Thailand)

1995-10-21T23:59:59.000Z

55

Joint Institute for Neutron Sciences | ornl.gov  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Facilities and Capabilities High Flux Isotope Reactor Spallation Neutron Source Joint Institute for Neutron Sciences Scientific Labs Neutron Science Home | Science & Discovery |...

56

Joint Institute for Nanoscience Annual Report 2003  

SciTech Connect (OSTI)

The Joint Institute for Nanoscience (JIN) is a cooperative venture of the University of Washington and Pacific Northwest National Laboratory to encourage and enhance high-impact and high-quality nanoscience and nanotechnology of all types. This first annual report for the JIN summarizes activities beginning in 2001 and ending at the close of fiscal year 2003 and therefore represents somewhat less than two years of activities. Major portions of the JIN resources are dedicated to funding graduate students and postdoctoral research associates to perform research in collaborations jointly directed by Pacific Northwest National Laboratory (PNNL) staff scientists and University of Washington (UW) professors. These fellowships were awarded on the basis of applications that included research proposals. JIN co-sponsors an annual Nanoscale Science and Technology Workshop held in Seattle. In addition to involving PNNL staff in various UW nanoscience courses and seminars, a National Science Foundation grant Development of UW-PNL Collaborative Curriculums in Nano-Science and Technology has allowed the development of three intensive short courses that are taught by UW faculty, PNNL staff, and faculty from other institutions, including Washington State University, the University of Idaho, Stanford University, and the University of Alaska. The initial JIN agreement recognized that expansion of cooperation beyond UW and PNNL would be highly valuable. Starting in early 2003, efforts were initiated to form a regional communication link called the Northwest Nanoscience and Nanotechnology Network (N?). In concept, N? is a tool to encourage communication and help identify regional resources and nanoscience and technology activities.

Baer, Donald R.; Campbell, Charles

2004-02-01T23:59:59.000Z

57

DOE Joint Genome Institute 2008 Progress Report  

E-Print Network [OSTI]

and Outreach Safety and Ergonomics Appendices Appendix A:QA, Instrumenta- tion, Ergonomics, Informatics) in the pastReport 2008 safety and ergonomics Safety is a core value of

Gilbert, David

2009-01-01T23:59:59.000Z

58

DOE Joint Genome Institute 2008 Progress Report  

E-Print Network [OSTI]

digestion, could produce biogas—primarily methane and carbongasoline per day. When biogas is cleaned of its particulates

Gilbert, David

2009-01-01T23:59:59.000Z

59

DOE Joint Genome Institute 2008 Progress Report  

E-Print Network [OSTI]

energy strategies, biomass conversion to biofuels, environ-the efficiency of the conversion of biomass to fuels. JGImore economi- cal conversion of biomass from such feedstocks

Gilbert, David

2009-01-01T23:59:59.000Z

60

DOE Joint Genome Institute 2008 Progress Report  

E-Print Network [OSTI]

producing microbial “subsamples” highly enriched for organisms that could metabo- lize methane, methanol,

Gilbert, David

2009-01-01T23:59:59.000Z

Note: This page contains sample records for the topic "joint genome institute" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


61

DOE Joint Genome Institute 2008 Progress Report  

E-Print Network [OSTI]

hemicellulose and lignin. ” Bio- fuels researchers are ableatmosphere when burned, but bio- fuels only release carbonenvironmentally sustainable bio- fuel crop than corn and

Gilbert, David

2009-01-01T23:59:59.000Z

62

DOE Joint Genome Institute 2008 Progress Report  

E-Print Network [OSTI]

possible to produce ethanol from cellulose on an industrialof breaking down cellulose into ethanol, considered by someof cellulosic ethanol, carbohydrate polymers (cellulose and

Gilbert, David

2009-01-01T23:59:59.000Z

63

is a Bioinformatics Scientist at the Institute for Genomic  

E-Print Network [OSTI]

Mihai Pop is a Bioinformatics Scientist at the Institute for Genomic Research. He earned his PhD in Computer Science from Johns Hopkins University in 2000. His research interests include genome assembly and comparative genomics. Adam Phillippy is a Bioinformatics Software Engineer at The Institute for Genomic

Salzberg, Steven

64

The Joint BioEnergy Institute (JBEI): Developing New Biofuels by Overcoming Biomass Recalcitrance  

E-Print Network [OSTI]

Bioenerg. Res. (010-9086-2 The Joint BioEnergy Institute (JBEI): DevelopingThe mission of the Joint BioEnergy Institute is to advance

Scheller, Henrik Vibe; Singh, Seema; Blanch, Harvey; Keasling, Jay D.

2010-01-01T23:59:59.000Z

65

Joint Institute for Neutron Sciences | ornl.gov  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Joint Institute for Neutron Sciences Joint Institute for Neutron Sciences SHARE Joint Institute for Neutron Sciences JINS is located on Chestnut Ridge within the 80-acre SNS site, part of Oak Ridge National Laboratory. The Joint Institute for Neutron Sciences (JINS) was founded as a collaborative effort between Oak Ridge National Laboratory (ORNL) and The University of Tennessee to promote the use of neutron scattering in various fields of research. Through worldwide collaborations between researchers of the biological and life sciences, energy sciences, polymer science, condensed matter physics and computational sciences, a synergistic consortium will be created at ORNL to elevate the field of neutron sciences to a new level of efficacy for industry, medicine and frontier research. The goal of JINS is to serve as a gateway for users of the Spallation

66

DOE JGI Whole Genome Shotgun Sequencing, part 1  

ScienceCinema (OSTI)

A Howard Hughes Medical Institute (HHMI) video production describing the Whole Genome Shotgun Sequencing process at the US Department of Energy's Joint Genome Institute (JGI).

Miranda Harmon-Smith

2010-09-01T23:59:59.000Z

67

Genome Rearrangement and Planning Institute of Information Systems  

E-Print Network [OSTI]

Genome Rearrangement and Planning Esra Erdem Institute of Information Systems Vienna University Avenue, Toronto, Canada e.tillier@utoronto.ca Abstract The genome rearrangement problem is to find the most eco­ nomical explanation for observed differences between the gene orders of two genomes

Erdem, Esra

68

JOINT INSTITUTE FOR THE STUDY OF THE ATMOSPHERE & OCEAN (JISAO)  

E-Print Network [OSTI]

-dimensional datasets. SCIENCE HIgHLIgHTS MARINE ECOSYSTEMS / FISHERIES RECRUITMENT Collaborations JOINT INSTITUTE FOR THE STUDY OF THE ATMOSPHERE & OCEAN (JISAO) ANNUAL REPORT JULy 1, 2005 ­ JUNE Management and Administration 20 ProjEct SummariES 23 Marine Ecosystems 24 Climate 44 Environmental Chemistry

Rigor, Ignatius G.

69

JournalJoint Oceanographic Institutions for Deep Earth SamplingJoint Oceanographic Institutions for Deep Earth Sampling Vol. 25 No. 1-1999  

E-Print Network [OSTI]

JOIDES JournalJoint Oceanographic Institutions for Deep Earth SamplingJoint Oceanographic Institutions for Deep Earth Sampling Vol. 25 No. 1-1999 Continental Rifting, Low-angle Normal Faulting and Deep Data to the World Wide Web The Ocean Drilling Stratigraphic Network #12;The JOIDES office moved

70

Communicating Genomics:GTL  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Annual Annual DOE Joint Genome Institute User Meeting Sponsored By U.S. Department of Energy Office of Science March 29-April 1, 2006 Embassy Suites Hotel and DOE Joint Genome Institute Walnut Creek, California iii Contents Agenda .................................................................................................................. iv Speaker Presentations . .........................................................................................1 Abtracts in order of presentation according to agenda (p. iv) Poster Presentations ..............................................................................................9 Posters alphabetical by first author. *Presenting author. Attendees...............................................................................................................75

71

Rooted in Wonder: Joint Genome Institute Study Reveals Amazing...  

Energy Savers [EERE]

like corn or wheat) researchers may be able to improve their growth -- or provide better care for them in times of drought. By developing a better understanding of the microbes...

72

The Joint BioEnergy Institute (JBEI): Developing New Biofuels by Overcoming Biomass Recalcitrance  

Science Journals Connector (OSTI)

The mission of the Joint BioEnergy Institute is to advance the development of the next-generation of biofuels—liquid fuels derived from the solar energy...

Henrik Vibe Scheller; Seema Singh; Harvey Blanch; Jay D. Keasling

2010-06-01T23:59:59.000Z

73

Climate Models from the Joint Global Change Research Institute  

DOE Data Explorer [Office of Scientific and Technical Information (OSTI)]

Staff at the Joint Institute develop and use models to simulate the economic and physical impacts of global change policy options. The GCAM, for example, gives analysts insight into how regional and national economies might respond to climate change mitigation policies including carbon taxes, carbon trading, and accelerated deployment of energy technology. Three available models are Phoenix, GCAM, and EPIC. Phoenix is a global, dynamic recursive, computable general equilibrium model that is solved in five-year time steps from 2005 through 2100 and divides the world into twenty-four regions. Each region includes twenty-six industrial sectors. Particular attention is paid to energy production in Phoenix. There are nine electricity-generating technologies (coal, natural gas, oil, biomass, nuclear, hydro, wind, solar, and geothermal) and four additional energy commodities: crude oil, refined oil products, coal, and natural gas. Phoenix is designed to answer economic questions related to international climate and energy policy and international trade. Phoenix replaces the Second Generation Model (SGM) that was formerly used for general equilibrium analysis at JGCRI. GCAM is the Global Change Assessment Model, a partial equilibrium model of the world with 14 regions. GCAM operates in 5 year time steps from 1990 to 2095 and is designed to examine long-term changes in the coupled energy, agriculture/land-use, and climate system. GCAM includes a 151-region agriculture land-use module and a reduced form carbon cycle and climate module in addition to its incorporation of demographics, resources, energy production and consumption. The model has been used extensively in a number of assessment and modeling activities such as the Energy Modeling Forum (EMF), the U.S. Climate Change Technology Program, and the U.S. Climate Change Science Program and IPCC assessment reports. GCAM is now freely available as a community model. The Environmental Policy Integrated Climate (EPIC) Model is a process-based agricultural systems model composed of simulation components for weather, hydrology, nutrient cycling, pesticide fate, tillage, crop growth, soil erosion, crop and soil management and economics. Staff at PNNL have been involved in the development of this model by integrating new sub-models for soil carbon dynamics and nitrogen cycling.

74

Chlamydomonas reinhardtii at the Crossroads of Genomics  

Science Journals Connector (OSTI)

...55108 4 Department of Energy, Joint Genome Institute...with light as a sole energy source (photoautotrophic...production of clean, solar-generated energy in the form of H2, and...59). Ongoing genome projects offer the scientific...

Arthur R. Grossman; Elizabeth E. Harris; Charles Hauser; Paul A. Lefebvre; Diego Martinez; Dan Rokhsar; Jeff Shrager; Carolyn D. Silflow; David Stern; Olivier Vallon; Zhaoduo Zhang

2003-12-01T23:59:59.000Z

75

The Scientific Foundation for Personal Genomics: Recommendations from a National Institutes of  

E-Print Network [OSTI]

The Scientific Foundation for Personal Genomics: Recommendations from a National Institutes of personal genomic tests has led to discussions about the validity and utility of such tests and the balance and the Centers for Disease Control and Prevention to review the scientific foundation for using personal genom

Church, George M.

76

Oak Ridge National Laboratory Joint Institute for Computing Science Building 5100  

High Performance Buildings Database

Oak Ridge, TN The University of Tennessee (UT) and Oak Ridge National Laboratory (ORNL) established the Joint Institute for Computational Sciences (JICS) to advance scientific discovery and state-of-the-art engineering and to further knowledge of computational modeling and simulation, taking full advantage of the computers operating at the tera scale and beyond at the National Center for Computational Sciences housed at ORNL.

77

Perspectives on the institutional needs of joint implementation projects for China, Egypt, India, Mexico, and Thailand  

SciTech Connect (OSTI)

One avenue for reducing the net emissions of greenhouse gases (GHG) under the Framework Convention on Climate Change (FCCC) is the joint implementation (JI) of policies and projects to the Convention. Although debate on the practical aspects of JI projects is relatively young, it already includes issues concerning the ability of governments to accept JI projects as well as the project participants` capacity to monitor, evaluate, and verify the financial and GHG benefits. The focus of this paper is an in-depth, country-by-country analysis of current and conceivable institutions in potential host countries. To understand these concerns better, in August 1994 the authors asked colleagues in five developing countries to evaluate their countries` institutional capacity for JI projects. Their perspectives are presented here as individual country case studies. The five countries--Mexico, Egypt, Thailand, India, and China--were chosen because each has significant potential for JI projects.

Mabel, M.; Watt, E.; Sathaye, J. [eds.] [and others

1995-10-01T23:59:59.000Z

78

Genomic Encyclopedia of Fungi  

SciTech Connect (OSTI)

Genomes of fungi relevant to energy and environment are in focus of the Fungal Genomic Program at the US Department of Energy Joint Genome Institute (JGI). Its key project, the Genomics Encyclopedia of Fungi, targets fungi related to plant health (symbionts, pathogens, and biocontrol agents) and biorefinery processes (cellulose degradation, sugar fermentation, industrial hosts), and explores fungal diversity by means of genome sequencing and analysis. Over 150 fungal genomes have been sequenced by JGI to date and released through MycoCosm (www.jgi.doe.gov/fungi), a fungal web-portal, which integrates sequence and functional data with genome analysis tools for user community. Sequence analysis supported by functional genomics leads to developing parts list for complex systems ranging from ecosystems of biofuel crops to biorefineries. Recent examples of such parts suggested by comparative genomics and functional analysis in these areas are presented here.

Grigoriev, Igor

2012-08-10T23:59:59.000Z

79

Communicating Genomics:GTL  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

DOE Joint Genome Institute User Meeting Sponsored By U.S. Department of Energy Office of Science March 24-26, 2010 Walnut Creek Marriott Walnut Creek, California iii Contents Speaker Presentations ......................................................................................... 1 Poster Presentations........................................................................................... 11 Attendees............................................................................................................. 67 Author Index ...................................................................................................... 75 iv Posters alphabetical by first author. *Presenting author 1 Speaker Presentations Abstracts alphabetical by speaker

80

Genomic analysis of the uncultivated marine crenarchaeote Cenarchaeum symbiosum  

Science Journals Connector (OSTI)

...Celine Brochier, Asuncion Martinez, Tsultrim Palden, Tracy Mincer, Matthew Sullivan, Maureen Coleman, Jarod Chapman, Sam Pitluck, Chris Detter, Krishna Palaniappan, and the Joint Genome Institute staff for computational and technical assistance. J...

Steven J. Hallam; Konstantinos T. Konstantinidis; Nik Putnam; Christa Schleper; Yoh-ichi Watanabe; Junichi Sugahara; Christina Preston; José de la Torre; Paul M. Richardson; Edward F. DeLong

2006-01-01T23:59:59.000Z

Note: This page contains sample records for the topic "joint genome institute" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


81

Genomic Potential of Marinobacter aquaeolei, a Biogeochemical “Opportunitroph”  

Science Journals Connector (OSTI)

...51). They rapidly exploit nutrient patches and die or become dormant after substrate...annotated by the Joint Genome Institute pipeline using three gene finders, Critica (version...yellow, replication, recombination, and repair; purple, general function prediction...

Esther Singer; Eric A. Webb; William C. Nelson; John F. Heidelberg; Natalia Ivanova; Amrita Pati; Katrina J. Edwards

2011-02-18T23:59:59.000Z

82

JournalJoint Oceanographic Institutions for Deep Earth SamplingJoint Oceanographic Institutions for Deep Earth Sampling Vol. 25 No. 2-1999  

E-Print Network [OSTI]

Institutions for Deep Earth Sampling Vol. 25 No. 2-1999 Cool-water `Reefs', Possible Hydrogen Sulphide 35 years old. Not many people realize that JOIDES pre-dates both the Deep Sea Drilling Project in the Ceno- zoic history of the oceans ­ to learn more about the cooling of deep ocean waters and inception

83

JGI - 2009 Genome Sequencing Targets  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

July 2, 2008 July 2, 2008 Pine Tree, Boat-Boring Bivalve "Bugs", Duck Weed, Oil-Producing Microalgae, Stinkbird Gut, 40 Others Top DOE Joint Genome Institute 2009 Genome Sequencing Targets WALNUT CREEK, CA-In the continuing effort to tap the vast, unexplored reaches of the earth's microbial and plant domains for bioenergy and environmental applications, the DOE Joint Genome Institute (DOE JGI) has announced its latest portfolio of DNA sequencing projects that it will undertake in the coming year. The 44 projects, culled from nearly 150 proposals received through the Community Sequencing Program (CSP), represent over 60 billion nucleotides of data to be generated through this biodiversity sampling campaign-roughly the equivalent of 20 human genomes. "The scientific and technological advances enabled by the information

84

Complete Genome Sequence of the hyperthermophilic sulfate-reducing bacterium Thermodesulfobacterium geofontis OPF15T  

SciTech Connect (OSTI)

Thermodesulfobacterium geofontis OPF15T was isolated from Obsidian Pool, Yellowstone National Park and grows optimally at 83 oC. The OPF15T genome was finished at the Joint Genome Institute and the 1.6 Mb sequence has been annotated and deposited for future genomic studies aimed at understanding microbial processes and nutrient cycles in high-temperature environments.

Elkins, James G [ORNL; Hamilton-Brehm, Scott [ORNL; Walston Davenport, Karen [Los Alamos National Laboratory (LANL); Land, Miriam L [ORNL; Goodwin, Lynne A. [Los Alamos National Laboratory (LANL); Tapia, Roxanne [Los Alamos National Laboratory (LANL); Meincke, Linda [Los Alamos National Laboratory (LANL); Detter, J C [U.S. Department of Energy, Joint Genome Institute; Bruce, David [Los Alamos National Laboratory (LANL); Han, Cliff [Los Alamos National Laboratory (LANL); Cottingham, Robert W [ORNL

2013-01-01T23:59:59.000Z

85

Addressing the Need for Alternative Transportation Fuels: The Joint BioEnergy Institute  

SciTech Connect (OSTI)

Today, carbon-rich fossil fuels, primarily oil, coal, and natural gas, provide 85% of the energy consumed in the U.S. As world demand increases, oil reserves may become rapidly depleted. Fossil fuel use increases CO{sub 2} emissions and raises the risk of global warming. The high energy content of liquid hydrocarbon fuels makes them the preferred energy source for all modes of transportation. In the U.S. alone, transportation consumes >13.8 million barrels of oil per day and generates 0.5 gigatons of carbon per year. This release of greenhouse gases has spurred research into alternative, nonfossil energy sources. Among the options (nuclear, concentrated solar thermal, geothermal, hydroelectric, wind, solar, and biomass), only biomass has the potential to provide a high-energy-content transportation fuel. Biomass is a renewable resource that can be converted into carbon-neutral transporation fuels. Currently, biofuels such as ethanol are produced largely from grains, but there is a large, untapped resource (estimated at more than a billion tons per year) of plant biomass that could be utilized as a renewable, domestic source of liquid fuels. Well-established processes convert the starch content of the grain into sugars that can be fermented to ethanol. The energy efficiency of starch-based biofuels is however not optimal, while plant cell walls (lignocellulose) represent a huge untapped source of energy. Plant-derived biomass contains cellulose, which is more difficult to convert to sugars; hemicellulose, which contains a diversity of carbohydrates that have to be efficiently degraded by microorganisms to fuels; and lignin, which is recalcitrant to degradation and prevents cost-effective fermentation. The development of cost-effective and energy-efficient processes to transform lignocellulosic biomass into fuels is hampered by significant roadblocks, including the lack of specifically developed energy crops, the difficulty in separating biomass components, low activity of enzymes used to deconstruct biomass, and the inhibitory effect of fuels and processing byproducts on organisms responsible for producing fuels from biomass monomers. The Joint BioEnergy Institute (JBEI) is a U.S. Department of Energy (DOE) Bioenergy Research Center that will address these roadblocks in biofuels production. JBEI draws on the expertise and capabilities of three national laboratories (Lawrence Berkeley National Laboratory (LBNL), Sandia National Laboratories (SNL), and Lawrence Livermore National Laboratory (LLNL)), two leading U.S. universities (University of California campuses at Berkeley (UCB) and Davis (UCD)), and a foundation (Carnegie Institute for Science, Stanford) to develop the scientific and technological base needed to convert the energy stored in lignocellulose into transportation fuels and commodity chemicals. Established scientists from the participating organizations are leading teams of researchers to solve the key scientific problems and develop the tools and infrastructure that will enable other researchers and companies to rapidly develop new biofuels and scale production to meet U.S. transportation needs and to develop and rapidly transition new technologies to the commercial sector. JBEI's biomass-to-biofuels research approach is based in three interrelated scientific divisions and a technologies division. The Feedstocks Division will develop improved plant energy crops to serve as the raw materials for biofuels. The Deconstruction Division will investigate the conversion of this lignocellulosic plant material to sugar and aromatics. The Fuels Synthesis Division will create microbes that can efficiently convert sugar and aromatics into ethanol and other biofuels. JBEI's cross-cutting Technologies Division will develop and optimize a set of enabling technologies including high-throughput, chipbased, and omics platforms; tools for synthetic biology; multi-scale imaging facilities; and integrated data analysis to support and integrate JBEI's scientific program.

Blanch, Harvey; Adams, Paul; Andrews-Cramer, Katherine; Frommer, Wolf; Simmons, Blake; Keasling, Jay

2008-01-18T23:59:59.000Z

86

DOE Joint Genome Institute: A Microbiological "Template" for Mitigating  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

July 1, 2011 July 1, 2011 A Microbiological "Template" for Mitigating Methane Emissions WALNUT CREEK, Calif.-Carbon dioxide may be the most name-dropped greenhouse gas, but methane is 20 times more potent. In 2009, the U.S. Environmental Protection Agency calculated that 20 percent of the nation's human-related methane emissions were attributable to livestock digestive processes. In Australia, livestock emissions account for 12 percent of the country's total greenhouse gas emissions. Wallaby Photo:Wallaby, photo by Mehgan Murphy, Smithsonian's National Zoo. To understand how methane is produced in livestock, an international team of scientists including researchers at Australia's Commonwealth Scientific and Industrial Research Organisation (CSIRO) and the DOE JGI

87

DOE Joint Genome Institute: Getting to the Root-Unearthing the  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

August 1, 2012 August 1, 2012 Getting to the Root- Unearthing the Plant-Microbe Quid Pro Quo While the flower may attract the bee and the admiring eye of the passerby, it is the unseen complex network of life below ground where the action is. The microbial community or microbiome that inhabits the rhizosphere and endosphere -the niches immediately surrounding and inside a plant's root-facilitates the shuttling of nutrients and information into and out of the roots within the soil matrix. This commerce, by enabling the plant to adapt to its immediate environment, contributes to plant health and growth, defense against pests, management of carbon and other elements for the enrichment of the soil, and even informs the plant's ability to sequester contaminants. These underground microbial activities have not

88

DOE Joint Genome Institute: How Now, Inside the Cow: Nearly 30,000 Novel  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

January 27, 2011 January 27, 2011 How Now, Inside the Cow: Nearly 30,000 Novel Enzymes for Biofuel Production Improvements To download Cow Rumen data, go to: http://portal.nersc.gov/project/jgimg/CowRumenRawData/submission/ WALNUT CREEK, Calif.-Cows eat grass-this has been observed for eons. From this fibrous diet consisting mainly of the tough to degrade plant cell wall materials cellulose and hemicellulose, substances of no nutritional value to most animals, ruminants manage to extract all they need to nourish themselves, their progeny and their keepers. And now, the cow, or rather the network of organisms working unseen in the cow's forestomach or rumen, is providing researchers with vital information that may someday accelerate the large-scale deployment of biofuels. This will offer a

89

DOE Joint Genome Institute: Salt-loving Microbe Provides New Enzymes for  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

June 30, 2011 June 30, 2011 Salt-loving Microbe Provides New Enzymes for the Production of Next Gen Biofuels WALNUT CREEK, Calif.-In order to realize the full potential of advanced biofuels that are derived from non-food sources of lignocellulosic biomass-e.g., agricultural, forestry, and municipal waste, and crops such as poplar, switchgrass and miscanthus-new technologies that can efficiently and cost-effectively break down this biomass into simple sugars are required. Existing biomass pretreatment technologies are typically derived from the pulp and paper industry and rely on dilute acids and bases to break down the biomass. The treated biomass product is then exposed to biological catalysts, or enzymes, to liberate the sugars. Eddy Rubin and Tao Zhang Photo:Tao Zhang (left), and Eddy Rubin (right).

90

First Annual U.S. Department of Energy Office of Science Joint Genome Institute User Meeting  

E-Print Network [OSTI]

involved in mild food poisoning, causing rather noxious,isolated from a severe food poisoning case in France (Lunda severe diarrheic food poisoning. It synthesizes at least

Various

2006-01-01T23:59:59.000Z

91

DOE Joint Genome Institute: Advancing Next Gen Biofuels by Turning Up the  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

October 2, 2011 October 2, 2011 Advancing Next Gen Biofuels by Turning Up the Heat on Biomass Pretreatment Processes WALNUT CREEK, Calif.-The nation's Renewable Fuels Standard calls for annual production of 36 billion gallons of biofuel by 2022. One of the biggest hurdles to achieving this goal lies in optimizing the multistep process involved in breaking down plant biomass and then converting it into fermentable sugars that can be refined into fuel for our transportation needs. To overcome this challenge, the U.S. Department of Energy supports several projects focused on identifying enzymes from fungi and microbes such as cellulases-that breakdown plant cell walls-and heat-tolerant industrial-strength host cell systems to drive these reactions. Photo: The thermophilic fungus M. thermophila

92

DOE Joint Genome Institute: Waves of Berkeley Lab Responders Deploy Omics  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

1, 2012 1, 2012 Waves of Berkeley Lab Responders Deploy Omics to Track Deepwater Horizon Oil Spill Cleanup Microbes In the aftermath of the Deepwater Horizon oil spill in the Gulf of Mexico two years ago, various strategies were deployed to prevent 4.9 million barrels of light crude oil from fouling the waters and reaching the shores. A team of Lawrence Berkeley National Laboratory (Berkeley Lab) researchers found that nature also played a role in the dispersal process as marine microbial communities responded to the oil plume that made its way from the wellhead at a depth of 5,000 feet to the surface of the water. "There was oil on the surface and oil below, but no oil in between," said microbial ecologist Terry Hazen, former head of the Ecology Department

93

Ms. Arti K. Rai, Elvin R. Latty Professor of Law Duke Law School, Duke Institute for Genome Sciences & Policy  

E-Print Network [OSTI]

Institutes of Health/Department of Energy research grant to study collaborative R&D models in genomics-2001 UNIVERSITY OF SAN DIEGO SCHOOL OF LAW Assistant Professor 1996-1997 PROGRAM IN ETHICS AND THE PROFESSIONS Foundations for Policy Development, 61 DUKE LAW JOURNAL 101 (2012)

Richardson, David

94

Microsoft PowerPoint - Microbial Genome and Metagenome Analysis Case Study (NERSC Workshop - May 7-8, 2009).ppt [Compatibility  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Genome & Genome & Metagenome Analysis: Computational Challenges Natalia N. Ivanova * Nikos C. Kyrpides * Victor M. Markowitz ** * Genome Biology Program, Joint Genome Institute ** Lawrence Berkeley National Lab Microbial genome & metagenome analysis General aims Understand microbial life Apply to agriculture, bioremediation, biofuels, human health Specific aims include Specific aims include Predict biochemistry & physiology of organisms based on genome sequence Explain known biochemical & physiological properties Metabolic reconstruction * Ivanova & Lykidis (2009) Metabolic reconstruction. Encyclopedia of Microbiology, Elsevier: 607-621. 2 Genome sequence data size Now ~1,400 microbial genomes = 5.5 mil genes ~ 100 metagenomes samples

95

Defining Genome Project Standards in a New Era of Sequencing (GSC8 Meeting)  

ScienceCinema (OSTI)

The Genomic Standards Consortium was formed in September 2005. It is an international, open-membership working body which promotes standardization in the description of genomes and the exchange and integration of genomic data. The 2009 meeting was an activity of a five-year funding "Research Coordination Network" from the National Science Foundation and was organized held at the DOE Joint Genome Institute with organizational support provided by the JGI and by the University of California - San Diego.

Chain, Patrick [DOE JGI

2011-04-28T23:59:59.000Z

96

The Joint Institute for Strategic Energy Analysis is operated by the Alliance for Sustainable Energy, LLC, on behalf of the U.S. Department of Energy's  

E-Print Network [OSTI]

of the INL- JISEA Workshop on Nuclear Hybrid Energy Systems Mark Antkowiak and Mark Ruth National Renewable 80401 303-275-3000 · www.jisea.org Contract No. DE-AC36-08GO28308 Summary Report of the INL- JISEA by the Joint Institute for Strategic Energy Analysis (JISEA) and the Idaho National Laboratory (INL

97

4th Joint Meeting of the U.S. Sections of the Combustion Institute, Philadelphia, PA, 2005 Systematic Reduction of Large Chemical Mechanisms  

E-Print Network [OSTI]

of en- gine combustion chambers, require the accurate prediction of chemical features like heat release4th Joint Meeting of the U.S. Sections of the Combustion Institute, Philadelphia, PA, 2005. Detailed kinetic mechanisms are now available for a large number of hydrocarbon fuels. However

Pitsch, Heinz

98

Introduction to Metagenomics at DOE JGI: Program Overview and Program Informatics (Metagenomics Informatics Challenges Workshop: 10K Genomes at a Time)  

SciTech Connect (OSTI)

Susannah Tringe of the DOE Joint Genome Institute talks about the Program Overview and Program Informatics at the Metagenomics Informatics Challenges Workshop held at the DOE JGI on October 12-13, 2011

Tringe, Susannah [DOE JGI] [DOE JGI

2011-10-12T23:59:59.000Z

99

Genome Analyses and Supplement Data from the International Populus Genome Consortium (IPGC)  

DOE Data Explorer [Office of Scientific and Technical Information (OSTI)]

The sequencing of the first tree genome, that of Populus, was a project initiated by the Office of Biological and Environmental Research in DOE’s Office of Science. The International Populus Genome Consortium (IPGC) was formed to help develop and guide post-sequence activities. The IPGC website, hosted at the Oak Ridge National Laboratory, provides draft sequence data as it is made available from DOE Joint Genome Institute, genome analyses for Populus, lists of related publications and resources, and the science plan. The data are available at http://www.ornl.gov/sci/ipgc/ssr_resource.htm.

International Populus Genome Consortium (IPGC)

100

JGI Genomics and Bioinformatics for Undergraduate Educators Workshop |  

Broader source: Energy.gov (indexed) [DOE]

JGI Genomics and Bioinformatics for Undergraduate Educators JGI Genomics and Bioinformatics for Undergraduate Educators Workshop JGI Genomics and Bioinformatics for Undergraduate Educators Workshop March 23, 2013 3:00PM EDT to March 26, 2013 6:00PM EDT University of California The JGI will be holding the JGI Genomics and Bioinformatics for Undergraduate Educators Workshop in conjunction with the JGI User Meeting. The workshop will take place March 23-26, 2013 at the JGI. The DOE Joint Genome Institute's Education Program is providing opportunities for colleges and universities across the country to "interpret" bacterial genomes, such as those sequenced as part of the GEBA project, for analysis. This "Interpret a GEBA Genome" Education Program makes available a selection of recently sequenced genomes

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101

Complete Genome Sequence of the Thermophilic, Piezophilic, Heterotrophic Bacterium Marinitoga piezophila KA3  

SciTech Connect (OSTI)

Marinitoga piezophila KA3 is a thermophilic, anaerobic, chemoorganotrophic, sulfur-reducing bacterium isolated from the Grandbonum deep-sea hydrothermal vent site at the East Pacific Rise (13 degrees N, 2,630-m depth). The genome of M. piezophila KA3 comprises a 2,231,407-bp circular chromosome and a 13,386-bp circular plasmid. This genome was sequenced within Department of Energy Joint Genome Institute CSP 2010.

Lucas, Susan [U.S. Department of Energy, Joint Genome Institute; Han, James [U.S. Department of Energy, Joint Genome Institute; Lapidus, Alla L. [U.S. Department of Energy, Joint Genome Institute; Cheng, Jan-Fang [U.S. Department of Energy, Joint Genome Institute; Goodwin, Lynne A. [Los Alamos National Laboratory (LANL); Pitluck, Sam [U.S. Department of Energy, Joint Genome Institute; Peters, Lin [U.S. Department of Energy, Joint Genome Institute; Mikhailova, Natalia [U.S. Department of Energy, Joint Genome Institute; Teshima, Hazuki [Los Alamos National Laboratory (LANL); Detter, J. Chris [U.S. Department of Energy, Joint Genome Institute; Han, Cliff [Los Alamos National Laboratory (LANL); Tapia, Roxanne [Los Alamos National Laboratory (LANL); Land, Miriam L [ORNL; Hauser, Loren John [ORNL; Kyrpides, Nikos C [U.S. Department of Energy, Joint Genome Institute; Ivanova, N [U.S. Department of Energy, Joint Genome Institute; Pagani, Ioanna [U.S. Department of Energy, Joint Genome Institute; Vannier, Pauline [Ifremer, Plouzane, France; Oger, Phil [University of Lyon, France; Bartlett, Douglas [University of California, San Diego & La Jolla; Noll, Kenneth M [University of Connecticut, Storrs; Woyke, Tanja [U.S. Department of Energy, Joint Genome Institute; Jebbar, Mohamed [Ifremer, Plouzane, France

2012-01-01T23:59:59.000Z

102

Complete genome sequence of Methanoculleus marisnigri type strain JR1  

SciTech Connect (OSTI)

Methanoculleus marisnigri Romesser et al. 1981 is a methanogen belonging to the order Methanomicrobiales within the archaeal phylum Euryarchaeota. The type strain, JR1, was isolated from anoxic sediments of the Black Sea. M. marisnigri is of phylogenetic interest because at the time the sequencing project began only one genome had previously been sequenced from the order Methanomicrobiales. We report here the complete genome sequence of M. marisnigri type strain JR1 and its annotation. This is part of a Joint Genome Institute 2006 Community Sequencing Program to sequence genomes of diverse Archaea.

Anderson, Iain [U.S. Department of Energy, Joint Genome Institute; Sieprawska-Lupa, Magdalena [University of Georgia, Athens, GA; Goltsman, Eugene [U.S. Department of Energy, Joint Genome Institute; Lapidus, Alla L. [U.S. Department of Energy, Joint Genome Institute; Copeland, A [U.S. Department of Energy, Joint Genome Institute; Glavina Del Rio, Tijana [U.S. Department of Energy, Joint Genome Institute; Tice, Hope [U.S. Department of Energy, Joint Genome Institute; Dalin, Eileen [U.S. Department of Energy, Joint Genome Institute; Barry, Kerrie [U.S. Department of Energy, Joint Genome Institute; Saunders, Elizabeth H [Los Alamos National Laboratory (LANL); Han, Cliff [Los Alamos National Laboratory (LANL); Brettin, Tom [Los Alamos National Laboratory (LANL); Detter, J. Chris [U.S. Department of Energy, Joint Genome Institute; Bruce, David [Los Alamos National Laboratory (LANL); Mikhailova, Natalia [U.S. Department of Energy, Joint Genome Institute; Pitluck, Sam [U.S. Department of Energy, Joint Genome Institute; Hauser, Loren John [ORNL; Land, Miriam L [ORNL; Lucas, Susan [U.S. Department of Energy, Joint Genome Institute; Richardson, P M [U.S. Department of Energy, Joint Genome Institute; Whitman, W. B. [University of Georgia, Athens, GA; Kyrpides, Nikos C [U.S. Department of Energy, Joint Genome Institute

2009-01-01T23:59:59.000Z

103

Complete genome sequence of Methanocorpusculum labreanum type strain Z  

SciTech Connect (OSTI)

Methanocorpusculum labreanum is a methanogen belonging to the order Methanomicrobiales within the archaeal phylum Euryarchaeota. The type strain Z was isolated from surface sediments of Tar Pit Lake in the La Brea Tar Pits in Los Angeles, California. M. labreanum is of phylogenetic interest because at the time the sequencing project began only one genome had previously been sequenced from the order Methanomicrobiales. We report here the complete genome sequence of M. labreanum type strain Z and its annotation. This is part of a 2006 Joint Genome Institute Community Sequencing Program project to sequence genomes of diverse Archaea.

Anderson, Iain [U.S. Department of Energy, Joint Genome Institute; Sieprawska-Lupa, Magdalena [University of Georgia, Athens, GA; Goltsman, Eugene [U.S. Department of Energy, Joint Genome Institute; Lapidus, Alla L. [U.S. Department of Energy, Joint Genome Institute; Copeland, A [U.S. Department of Energy, Joint Genome Institute; Glavina Del Rio, Tijana [U.S. Department of Energy, Joint Genome Institute; Tice, Hope [U.S. Department of Energy, Joint Genome Institute; Dalin, Eileen [U.S. Department of Energy, Joint Genome Institute; Barry, Kerrie [U.S. Department of Energy, Joint Genome Institute; Pitluck, Sam [U.S. Department of Energy, Joint Genome Institute; Hauser, Loren John [ORNL; Land, Miriam L [ORNL; Lucas, Susan [U.S. Department of Energy, Joint Genome Institute; Richardson, P M [U.S. Department of Energy, Joint Genome Institute; Whitman, W. B. [University of Georgia, Athens, GA; Kyrpides, Nikos C [U.S. Department of Energy, Joint Genome Institute

2009-01-01T23:59:59.000Z

104

Reverse Methanogenesis: Testing the Hypothesis with Environmental Genomics  

Science Journals Connector (OSTI)

...technical assistance, and the pilots of the ROV Tiburon and the captain and crew of the R/V Western Flyer. We also thank S. Pitluck and the Joint Genome Institute staff for technical assistance, and W. Ussler and D. Graham, who provided insight and commentary...

Steven J. Hallam; Nik Putnam; Christina M. Preston; John C. Detter; Daniel Rokhsar; Paul M. Richardson; Edward F. DeLong

2004-09-03T23:59:59.000Z

105

Fueling Future with Algal Genomics  

SciTech Connect (OSTI)

Algae constitute a major component of fundamental eukaryotic diversity, play profound roles in the carbon cycle, and are prominent candidates for biofuel production. The US Department of Energy Joint Genome Institute (JGI) is leading the world in algal genome sequencing (http://jgi.doe.gov/Algae) and contributes of the algal genome projects worldwide (GOLD database, 2012). The sequenced algal genomes offer catalogs of genes, networks, and pathways. The sequenced first of its kind genomes of a haptophyte E.huxleyii, chlorarachniophyte B.natans, and cryptophyte G.theta fill the gaps in the eukaryotic tree of life and carry unique genes and pathways as well as molecular fossils of secondary endosymbiosis. Natural adaptation to conditions critical for industrial production is encoded in algal genomes, for example, growth of A.anophagefferens at very high cell densities during the harmful algae blooms or a global distribution across diverse environments of E.huxleyii, able to live on sparse nutrients due to its expanded pan-genome. Communications and signaling pathways can be derived from simple symbiotic systems like lichens or complex marine algae metagenomes. Collectively these datasets derived from algal genomics contribute to building a comprehensive parts list essential for algal biofuel development.

Grigoriev, Igor

2012-07-05T23:59:59.000Z

106

Coordinating rooks and bishops: an institutional history of the joint army and navy board, 1903-1919  

E-Print Network [OSTI]

and coordination during this period receive no more than peripheral analysis in war plan studies. The first historian to make any mention of the Joint Board was diplomatic historian Fred Greene in his January 1961 American Historical Review article ?The 5... Wilson presidency, the Board had become ?unimportant.? Due to the broad scope of the essay, Morton did not provide extensive analysis into why the Joint Board experienced such a dramatic decline in its influence. 5 Morton contributed an important...

Godin, Jason Robert

2005-11-01T23:59:59.000Z

107

Institutional  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

institutional Sign In About | Careers | Contact | Investors | bpa.gov Search Policy & Reporting Expand Policy & Reporting EE Sectors Expand EE Sectors Technology & Innovation...

108

Cultivation and Genomic, Nutritional, and Lipid Biomarker Characterization of Roseiflexus Strains Closely Related to Predominant In Situ Populations Inhabiting Yellowstone Hot Spring Microbial Mats  

Science Journals Connector (OSTI)

...microbial genomes (IMG) annotation pipeline of the Joint Genome Institute...separated into apolar (containing wax esters) and polar fractions...and alcohols that comprise the wax esters (see reference 44 for...are dominated by C30 to C36 wax esters, including n/iso...

Marcel T. J. van der Meer; Christian G. Klatt; Jason Wood; Donald A. Bryant; Mary M. Bateson; Laurens Lammerts; Stefan Schouten; Jaap S. Sinninghe Damsté; Michael T. Madigan; David M. Ward

2010-04-02T23:59:59.000Z

109

DEVELOPMENT, INSTALLATION AND OPERATION OF THE MPC&A OPERATIONS MONITORING (MOM) SYSTEM AT THE JOINT INSTITUTE FOR NUCLEAR RESEARCH (JINR) DUBNA, RUSSIA  

SciTech Connect (OSTI)

The Material Protection, Control and Accounting (MPC&A) Operations Monitoring (MOM) systems handling at the International Intergovernmental Organization - Joint Institute for Nuclear Research (JINR) is described in this paper. Category I nuclear material (plutonium and uranium) is used in JINR research reactors, facilities and for scientific and research activities. A monitoring system (MOM) was installed at JINR in April 2003. The system design was based on a vulnerability analysis, which took into account the specifics of the Institute. The design and installation of the MOM system was a collaborative effort between JINR, Brookhaven National Laboratory (BNL) and the U.S. Department of Energy (DOE). Financial support was provided by DOE through BNL. The installed MOM system provides facility management with additional assurance that operations involving nuclear material (NM) are correctly followed by the facility personnel. The MOM system also provides additional confidence that the MPC&A systems continue to perform effectively.

Kartashov,V.V.; Pratt,W.; Romanov, Y.A.; Samoilov, V.N.; Shestakov, B.A.; Duncan, C.; Brownell, L.; Carbonaro, J.; White, R.M.; Coffing, J.A.

2009-07-12T23:59:59.000Z

110

Illumina GA IIx & HiSeq 2000 Production Sequenccing and QC Analysis Pipelines at the DOE Joint Genome Institute  

E-Print Network [OSTI]

PGF) in Walnut Creek, CA. Ergonomics: Program and PhilosophyIndustrial Engineers (IIE) Applied Ergonomics Conference. InEmpowering Employees in Ergonomics to improve training,

Daum, Christopher

2011-01-01T23:59:59.000Z

111

Opening Remarks from the Joint Genome Institute and Argonne Lab High Performance Computing Workshop (2010 JGI/ANL HPC Workshop)  

ScienceCinema (OSTI)

DOE JGI Director Eddy Rubin gives opening remarks at the JGI/Argonne High Performance Computing (HPC) Workshop on January 25, 2010.

Rubin, Eddy

2011-06-03T23:59:59.000Z

112

Genomic Speciation and Adaptation in Aquilegia (2011 JGI User Meeting)  

ScienceCinema (OSTI)

The U.S. Department of Energy Joint Genome Institute (JGI) invited scientists interested in the application of genomics to bioenergy and environmental issues, as well as all current and prospective users and collaborators, to attend the annual DOE JGI Genomics of Energy & Environment Meeting held March 22-24, 2011 in Walnut Creek, Calif. The emphasis of this meeting was on the genomics of renewable energy strategies, carbon cycling, environmental gene discovery, and engineering of fuel-producing organisms. The meeting features presentations by leading scientists advancing these topics. Scott Hodges of the University of California, Santa Barbara gives a presentation on "Genomic Speciation and Adaptation in Aquilegia" at the 6th annual Genomics of Energy & Environment Meeting on March 23, 2011

Hodges, Scott [University of California, Santa Barbara

2011-06-03T23:59:59.000Z

113

Genomic Science | U.S. DOE Office of Science (SC)  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Biological Biological Systems Science Division (BSSD) » Genomic Science Biological and Environmental Research (BER) BER Home About Research Research Abstracts Searchable Archive of BER Highlights External link Biological Systems Science Division (BSSD) Genomic Science DOE Bioenergy Research Centers Radiochemistry & Imaging Instrumentation Radiobiology: Low Dose Radiation Research DOE Human Subjects Protection Program Structural Biology DOE Joint Genome Institute Climate and Environmental Sciences Division (CESD) Facilities Science Highlights Benefits of BER Funding Opportunities Biological & Environmental Research Advisory Committee (BERAC) News & Resources Contact Information Biological and Environmental Research U.S. Department of Energy SC-23/Germantown Building

114

Complete genome sequence of Ferroglobus placidus AEDII12DO  

SciTech Connect (OSTI)

Ferroglobus placidus belongs to the order Archaeoglobales within the archaeal phylum Euryar- chaeota. Strain AEDII12DO is the type strain of the species and was isolated from a shallow marine hydrothermal system at Vulcano, Italy. It is a hyperthermophilic, anaerobic chemoli- thoautotroph, but it can also use a variety of aromatic compounds as electron donors. Here we describe the features of this organism together with the complete genome sequence and anno- tation. The 2,196,266 bp genome with its 2,567 protein-coding and 55 RNA genes was se- quenced as part of a DOE Joint Genome Institute Laboratory Sequencing Program (LSP) project.

Anderson, Iain [U.S. Department of Energy, Joint Genome Institute; Risso, Carla [University of Massachusetts, Amherst; Holmes, Dawn [University of Massachusetts, Amherst; Lucas, Susan [U.S. Department of Energy, Joint Genome Institute; Copeland, A [U.S. Department of Energy, Joint Genome Institute; Lapidus, Alla L. [U.S. Department of Energy, Joint Genome Institute; Cheng, Jan-Fang [U.S. Department of Energy, Joint Genome Institute; Bruce, David [Los Alamos National Laboratory (LANL); Goodwin, Lynne A. [Los Alamos National Laboratory (LANL); Pitluck, Sam [U.S. Department of Energy, Joint Genome Institute; Saunders, Elizabeth H [Los Alamos National Laboratory (LANL); Brettin, Thomas S [ORNL; Detter, J. Chris [U.S. Department of Energy, Joint Genome Institute; Han, Cliff [Los Alamos National Laboratory (LANL); Tapia, Roxanne [Los Alamos National Laboratory (LANL); Larimer, Frank W [ORNL; Land, Miriam L [ORNL; Hauser, Loren John [ORNL; Woyke, Tanja [U.S. Department of Energy, Joint Genome Institute; Lovley, Derek [University of Massachusetts, Amherst; Kyrpides, Nikos C [U.S. Department of Energy, Joint Genome Institute; Ivanova, N [U.S. Department of Energy, Joint Genome Institute

2011-01-01T23:59:59.000Z

115

JGI CSP Delivers First Moss Genome  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

13, 2007 13, 2007 DOE JGI Community Sequencing Program Delivers First Moss Genome WALNUT CREEK, CA--Messages from nearly a half-billion years ago, conveyed via the inventory of genes sequenced from a present-day moss, provide clues about the earliest colonization of dry land by plants. The U.S. Department of Energy Joint Genome Institute (DOE JGI) was among the leaders of an international effort uniting more than 40 institutions to complete the first genome sequencing project of a nonvascular land plant, the moss Physcomitrella patens. The team's insights into the code that enabled this seminal emergence and dominance of land by plants are published December 13 online in Science Express. Scanning electron micrograph of Physcomitrella patens gametophores (moss shoots).

116

Complete genome sequence of Halopiger xanaduensis type strain (SH6T)  

SciTech Connect (OSTI)

Halopiger xanaduensis is the type species of the genus Halopiger and belongs to the euryarchaeal family Halobacteriaceae. H. xanaduensis strain SH-6, which is designated as the type strain, was isolated from the sediment of a salt lake in Inner Mongolia, Lake Shangmatala. Like other members of the family Halobacteriaceae, it is an extreme halophile requiring at least 2.5 M salt for growth. We report here the sequencing and annotation of the 4,355,268 bp genome, which includes one chromosome and three plasmids. This genome is part of a Joint Genome Institute (JGI) Community Sequencing Program (CSP) project to sequence diverse haloarchaeal genomes.

Anderson, Iain [U.S. Department of Energy, Joint Genome Institute; Tindall, Brian [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany; Rohde, Manfred [HZI - Helmholtz Centre for Infection Research, Braunschweig, Germany; Lucas, Susan [U.S. Department of Energy, Joint Genome Institute; Han, James [U.S. Department of Energy, Joint Genome Institute; Lapidus, Alla L. [U.S. Department of Energy, Joint Genome Institute; Cheng, Jan-Fang [U.S. Department of Energy, Joint Genome Institute; Goodwin, Lynne A. [Los Alamos National Laboratory (LANL); Pitluck, Sam [U.S. Department of Energy, Joint Genome Institute; Peters, Lin [U.S. Department of Energy, Joint Genome Institute; Pati, Amrita [U.S. Department of Energy, Joint Genome Institute; Mikhailova, Natalia [U.S. Department of Energy, Joint Genome Institute; Pagani, Ioanna [U.S. Department of Energy, Joint Genome Institute; Teshima, Hazuki [Los Alamos National Laboratory (LANL); Han, Cliff [Los Alamos National Laboratory (LANL); Tapia, Roxanne [Los Alamos National Laboratory (LANL); Land, Miriam L [ORNL; Woyke, Tanja [U.S. Department of Energy, Joint Genome Institute; Klenk, Hans-Peter [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany; Kyrpides, Nikos C [U.S. Department of Energy, Joint Genome Institute; Ivanova, N [U.S. Department of Energy, Joint Genome Institute

2012-01-01T23:59:59.000Z

117

Complete Genome Sequence of the Thermophilic Bacterium Exiguobacterium sp. AT1b  

SciTech Connect (OSTI)

Here we present the genome of strain Exiguobacterium sp. AT1b, a thermophilic member of the genus Exiguobacterium whose representatives were isolated from various environments along a thermal and physicochemical gradient. This genome was sequenced to be a comparative resource for the study of thermal adaptation with a psychroactive representative of the genus, Exiguobacterium sibiricum strain 255-15, that was previously sequenced by the U.S. Department of Energy s (DOE s) Joint Genome Institute (JGI) (http://genome.ornl.gov/microbial/exig/).

Vishnivetskaya, T. [University of Tennessee, Knoxville (UTK); Lucas, Susan [U.S. Department of Energy, Joint Genome Institute; Copeland, A [U.S. Department of Energy, Joint Genome Institute; Lapidus, Alla L [ORNL; Glavina Del Rio, Tijana [U.S. Department of Energy, Joint Genome Institute; Dalin, Eileen [U.S. Department of Energy, Joint Genome Institute; Tice, Hope [U.S. Department of Energy, Joint Genome Institute; Bruce, David [Los Alamos National Laboratory (LANL); Goodwin, Lynne A. [Los Alamos National Laboratory (LANL); Pitluck, Sam [U.S. Department of Energy, Joint Genome Institute; Saunders, Elizabeth H [Los Alamos National Laboratory (LANL); Brettin, Tom [Los Alamos National Laboratory (LANL); Detter, J. Chris [U.S. Department of Energy, Joint Genome Institute; Han, Cliff [Los Alamos National Laboratory (LANL); Larimer, Frank W [ORNL; Land, Miriam L [ORNL; Hauser, Loren John [ORNL; Kyrpides, Nikos C [U.S. Department of Energy, Joint Genome Institute; Ovchinnikova, Galina [U.S. Department of Energy, Joint Genome Institute; Kathariou, Sophia [North Carolina State University; Ramaley, Robert F. [University of Nebraska Medical Center; Rodrigues, Debora F. [University of Houston, Houston; Hendrix, Christie [Yellowstone National Park; Richardson, Paul [U.S. Department of Energy, Joint Genome Institute; Tiedje, James M. [Michigan State University, East Lansing

2011-01-01T23:59:59.000Z

118

Complete Genome Sequence of the Thermophilic Bacterium Exiguobacterium sp. AT1b  

SciTech Connect (OSTI)

Here we present the genome of strain Exiguobacterium sp. AT1b, a thermophilic member of the genus Exiguobacterium whose representatives were isolated from various environments along a thermal and physico-chemical gradient. This genome was sequenced to be a comparative resource for study of thermal adaptation with a psychroactive representative of the genus, Exiguobacterium sibiricum strain 255-15, that was previously sequenced by the U.S. Department of Energy's (DOE) Joint Genome Institute (JGI) (http://genome.ornl.gov/microbial/exig/).

Vishnivetskaya, T. [University of Tennessee, Knoxville (UTK); Lucas, Susan [U.S. Department of Energy, Joint Genome Institute; Copeland, A [U.S. Department of Energy, Joint Genome Institute; Lapidus, Alla L. [U.S. Department of Energy, Joint Genome Institute; Glavina Del Rio, Tijana [U.S. Department of Energy, Joint Genome Institute; Dalin, Eileen [U.S. Department of Energy, Joint Genome Institute; Tice, Hope [U.S. Department of Energy, Joint Genome Institute; Bruce, David [Los Alamos National Laboratory (LANL); Goodwin, Lynne A. [Los Alamos National Laboratory (LANL); Pitluck, Sam [U.S. Department of Energy, Joint Genome Institute; Saunders, Elizabeth H [Los Alamos National Laboratory (LANL); Brettin, Thomas S [ORNL; Detter, J. Chris [U.S. Department of Energy, Joint Genome Institute; Han, Cliff [Los Alamos National Laboratory (LANL); Larimer, Frank W [ORNL; Land, Miriam L [ORNL; Hauser, Loren John [ORNL; Kyrpides, Nikos C [U.S. Department of Energy, Joint Genome Institute; Ovchinnikova, Galina [U.S. Department of Energy, Joint Genome Institute; Kathariou, Sophia [North Carolina State University; Ramaley, Robert F. [University of Nebraska Medical Center; Rodrigues, Debora F. [University of Houston, Houston; Hendrix, Christie [Yellowstone National Park; Richardson, Paul [U.S. Department of Energy, Joint Genome Institute; Tiedje, James M. [Michigan State University, East Lansing

2011-01-01T23:59:59.000Z

119

Joint Center for Artificial Photosynthesis  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

North JCAP Headquarters Joint Center for Artificial Photosynthesis California Institute of Technology Jorgensen Laboratory, Mail Code 132-80 1200 East California Boulevard...

120

Diverse Lifestyles and Strategies of Plant Pathogenesis Encoded in the Genomes of Eighteen Doethideomycetes Fungi  

SciTech Connect (OSTI)

The class of Dothideomycetes is one of the largest and most diverse groups of fungi. Many are plant pathogens and pose a serious threat to agricultural crops grown for biofuel, food or feed. Most Dothideomycetes have only a single host and related species can have very diverse host plants. Eighteen genomes of Dothideomycetes have currently been sequenced by the Joint Genome Institute and other sequencing centers. Here we describe the results of comparative analyses of the fungi in this group.

Ohm, Robin A.; Feau, Nicolas; Henrissat, Bernard; Schoch, Conrad L.; Horwitz, Benjamin A.; Barry, Kerrie W.; Condon, Bradford J.; Copeland, Alex C.; Dhillon, Braham; Glaser, Fabien; Hesse, Cedar N.; Kosti, Idit; LaButti, Kurt; Lindquist, Erika A.; Lucas, Susan; Salamov, Asaf A.; Bradshaw, Rosie E.; Ciuffetti, Lynda; Hamelin, Richard C.; Kema, Gert H. J.; Lawrence, Christopher; Scott, James A.; Spatafora, Joseph W.; Turgeon, B. Gillian; de Wit, Pierre J. G. M.; Zhong, Shaobin; Goodwin, Stephen B.; Grigoriev, Igor V.

2012-03-13T23:59:59.000Z

Note: This page contains sample records for the topic "joint genome institute" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


121

The Physcomitrella Genome Reveals Evolutionary Insights into the Conquest of Land by Plants  

Science Journals Connector (OSTI)

...Magill, Eds. (Missouri Botanical Garden Press, St. Louis, MO, 2004 ), pp. 3 –12. 39 We thank K. Zhou and S. Pitluck at DOE Joint Genome Institute (JGI) for GenBank submissions and G. Werner and his group at JGI for support of gene annotation...

Stefan A. Rensing; Daniel Lang; Andreas D. Zimmer; Astrid Terry; Asaf Salamov; Harris Shapiro; Tomoaki Nishiyama; Pierre-François Perroud; Erika A. Lindquist; Yasuko Kamisugi; Takako Tanahashi; Keiko Sakakibara; Tomomichi Fujita; Kazuko Oishi; Tadasu Shin-I; Yoko Kuroki; Atsushi Toyoda; Yutaka Suzuki; Shin-ichi Hashimoto; Kazuo Yamaguchi; Sumio Sugano; Yuji Kohara; Asao Fujiyama; Aldwin Anterola; Setsuyuki Aoki; Neil Ashton; W. Brad Barbazuk; Elizabeth Barker; Jeffrey L. Bennetzen; Robert Blankenship; Sung Hyun Cho; Susan K. Dutcher; Mark Estelle; Jeffrey A. Fawcett; Heidrun Gundlach; Kousuke Hanada; Alexander Heyl; Karen A. Hicks; Jon Hughes; Martin Lohr; Klaus Mayer; Alexander Melkozernov; Takashi Murata; David R. Nelson; Birgit Pils; Michael Prigge; Bernd Reiss; Tanya Renner; Stephane Rombauts; Paul J. Rushton; Anton Sanderfoot; Gabriele Schween; Shin-Han Shiu; Kurt Stueber; Frederica L. Theodoulou; Hank Tu; Yves Van de Peer; Paul J. Verrier; Elizabeth Waters; Andrew Wood; Lixing Yang; David Cove; Andrew C. Cuming; Mitsuyasu Hasebe; Susan Lucas; Brent D. Mishler; Ralf Reski; Igor V. Grigoriev; Ralph S. Quatrano; Jeffrey L. Boore

2008-01-04T23:59:59.000Z

122

Abstract IA37: Clinical genomics  

Science Journals Connector (OSTI)

...Research. 15 October 2014 meeting-abstract Clinical Genomics Clinical Genomics: Oral Presentations - Invited Abstracts Abstracts...2013; San Diego, CA Abstract IA37: Clinical genomics Katherine A. Janeway Dana-Farber Cancer Institute...

Katherine A. Janeway

2014-10-15T23:59:59.000Z

123

FUNCTIONAL GENOMICS Program of Study  

E-Print Network [OSTI]

FUNCTIONAL GENOMICS Program of Study Research Areas Students Applying Correspondence Graduate Genomics. Students receive training in the biological, physical and computational sciences through of primary institutional affiliation. The Functional Genomics program is administered through the Graduate

Thomas, Andrew

124

Genomics of Plant-based Biofuels in the Journal Nature  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

3, 2008 3, 2008 DOE JGI Director Eddy Rubin Highlights the Genomics of Plant-based Biofuels in the Journal Nature WALNUT CREEK, CA-Genomics is accelerating improvements for converting plant biomass into biofuel-as an alternative to fossil fuel for the nation's transportation needs, reports Eddy Rubin, Director of the U.S. Department of Energy Joint Genome Institute (DOE JGI), in the August 14 edition of the journal Nature. In "Genomics of cellulosic biofuels," Rubin lays out a path forward for how emerging genomic technologies will contribute to a substantially different biofuels future as compared to the present corn-based ethanol industry-and in part mitigate the food-versus-fuel debate. The Nature Review is available for download (by subscription) at http://www.nature.com/.

125

Complete Genome Sequence of the Cellulolytic Thermophile Caldicellulosiruptor obsidiansis OB47T  

Science Journals Connector (OSTI)

...Laboratory, Los Alamos, New Mexico 87545 4 DOE Joint Genome...the primary carbon and energy source for cultivation...U.S. Department of Energy (DOE) Joint Genome...different aspects of renewable energy production, genome-enabled...

James G. Elkins; Adriane Lochner; Scott D. Hamilton-Brehm; Karen Walston Davenport; Mircea Podar; Steven D. Brown; Miriam L. Land; Loren J. Hauser; Dawn M. Klingeman; Babu Raman; Lynne A. Goodwin; Roxanne Tapia; Linda J. Meincke; J. Chris Detter; David C. Bruce; Cliff S. Han; Anthony V. Palumbo; Robert W. Cottingham; Martin Keller; David E. Graham

2010-09-17T23:59:59.000Z

126

Pacific Northwest National Laboratory The Joint Global Change  

Broader source: Energy.gov (indexed) [DOE]

Pacific Northwest Pacific Northwest National Laboratory The Joint Global Change The Joint Global Change Research Institute Research Institute Nuclear Power and Stabilizing CO 2 Concentrations Jae Edmonds and Sonny Kim Nuclear Energy Research Advisory Committee Meeting April 15 and 16, 2002 Alexandria, VA Pacific Northwest National Laboratory 2 The Joint Global Change The Joint Global Change Research Institute Research Institute CLIMATE CHANGE Pacific Northwest National Laboratory 3 The Joint Global Change The Joint Global Change Research Institute Research Institute CLIMATE CHANGE Multiple gases * CO 2 (fossil fuel, land-use) * CH 4 (rice paddies, ruminant livestock, landfills, coal mining, oil and gas production, incomplete combustion) * N 2 O (nitrogen fertilizers, industrial processes, other??)

127

A Collection of Algal Genomes from the JGI  

SciTech Connect (OSTI)

Algae, defined as photosynthetic eukaryotes other than plants, constitute a major component of fundamental eukaryotic diversity. Acquisition of the ability to conduct oxygenic photosynthesis through endosymbiotic events has been a principal driver of eukaryotic evolution, and today algae continue to underpin aquatic food chains as primary producers. Algae play profound roles in the carbon cycle, can impose health and economic costs through toxic blooms, and are candidate sources for bio-fuels; all of these research areas are part of the mission of DOE?s Joint Genome Institute (JGI). A collection of algal projects ongoing at JGI contributes to each of these areas and illustrates analyses employed in their genome exploration.

Kuo, Alan; Grigoriev, Igor

2012-03-19T23:59:59.000Z

128

Complete genome sequence of Hirschia baltica type strain (IFAM 1418T)  

SciTech Connect (OSTI)

The family Hyphomonadaceae within the Alphaproteobacteria is largely comprised of bacte- ria isolated from marine environments with striking morphologies and an unusual mode of cell growth. Here, we report the complete genome sequence Hirschia baltica, which is only the second a member of the Hyphomonadaceae with a published genome sequence. H. bal- tica is of special interest because it has a dimorphic life cycle and is a stalked, budding bacte- rium. The 3,455,622 bp long chromosome and 84,492 bp plasmid with a total of 3,222 pro- tein-coding and 44 RNA genes were sequenced as part of the DOE Joint Genome Institute Program CSP 2008.

Chertkov, Olga [Los Alamos National Laboratory (LANL); Brown, Pamela J.B. [Indiana University; Kysela, David T. [Indiana University; De Pedro, Miguel A. [Universidad Autonoma de Madrid, Madrid; Lucas, Susan [U.S. Department of Energy, Joint Genome Institute; Copeland, A [U.S. Department of Energy, Joint Genome Institute; Lapidus, Alla L. [U.S. Department of Energy, Joint Genome Institute; Glavina Del Rio, Tijana [U.S. Department of Energy, Joint Genome Institute; Tice, Hope [U.S. Department of Energy, Joint Genome Institute; Bruce, David [Los Alamos National Laboratory (LANL); Goodwin, Lynne A. [Los Alamos National Laboratory (LANL); Pitluck, Sam [U.S. Department of Energy, Joint Genome Institute; Detter, J. Chris [U.S. Department of Energy, Joint Genome Institute; Han, Cliff [Los Alamos National Laboratory (LANL); Larimer, Frank W [ORNL; Chang, Yun-Juan [ORNL; Jeffries, Cynthia [Oak Ridge National Laboratory (ORNL); Land, Miriam L [ORNL; Hauser, Loren John [ORNL; Kyrpides, Nikos C [U.S. Department of Energy, Joint Genome Institute; Ivanova, N [U.S. Department of Energy, Joint Genome Institute; Ovchinnikova, Galina [U.S. Department of Energy, Joint Genome Institute; Tindall, Brian [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany; Goker, Markus [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany; Klenk, Hans-Peter [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany; Brun, Yves V. [Indiana University

2011-01-01T23:59:59.000Z

129

The Genomes and Metagenomes (GEM) Catalogue (first presentation) and The ISA-GCDML Workshop (second presentation) (GSC8 Meeting)  

ScienceCinema (OSTI)

The Genomic Standards Consortium was formed in September 2005. It is an international, open-membership working body which promotes standardization in the description of genomes and the exchange and integration of genomic data. The 2009 meeting was an activity of a five-year funding ''Research Coordination Network'' from the National Science Foundation and was organized held at the DOE Joint Genome Institute with organizational support provided by the JGI and by the University of California - San Diego. Dawn Field of the NERC Centre for Ecology & Hydrology briefly introduces the GEM Catalogue, followed by Susanna Sansone of the European Bioinformatics Institute who talks about the ISA-GCDML workshop at the Genomic Standards Consortium's 8th meeting at the DOE JGI in Walnut Creek, Calif. on Sept. 9, 2009.

Field, Dawn [NERC Centre for Ecology and Hydrology]; Sansone, Susanna [EBI

2011-04-29T23:59:59.000Z

130

Joint Seminar Risk Management Institute &  

E-Print Network [OSTI]

in the U.S. and from the Henry Hub for natural gas. We also include weather metrics in the form are included. Energy factor market prices, the shape of the energy price curves, and weather metrics

Chaudhuri, Sanjay

131

Thomas Moore creates joint invention with MIT  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

which led to a seafood lunch - which led to a joint invention with colleagues from the Massachusetts Institute of Technology (MIT) that contributed to a sustainable energy...

132

Sequencing the Rice Genome  

Science Journals Connector (OSTI)

...University of Delhi and Nagendra Singh of the Indian Agricultural Research Institute) and...representing a single contig. On this point, Sasaki presented evidence from the RGP...ncgr.ac.cn/index.html Indian Rice Genome Program (University of Delhi...

Nancy A. Eckardt

133

Methods in comparative genomics: genome correspondence, gene identification and motif discovery  

E-Print Network [OSTI]

1 Methods in comparative genomics: genome correspondence, gene identification and motif discovery@mit.edu, nickp@genome.wi.mit.edu, bwb@genome.wi.mit.edu, bab@mit.edu, lander@wi.mit.edu (1) MIT/Whitehead Institute Center for Genome Research, 320 Charles St., Cambridge MA 02139 (2) MIT Computer Science

Kellis, Manolis

134

Ceramic joints  

DOE Patents [OSTI]

Butt joints between materials having different coefficients of thermal expansion are prepared having a reduced probability of failure of stress facture. This is accomplished by narrowing/tapering the material having the lower coefficient of thermal expansion in a direction away from the joint interface and not joining the narrow-tapered surface to the material having the higher coefficient of thermal expansion.

Miller, Bradley J. (Worcester, MA); Patten, Jr., Donald O. (Sterling, MA)

1991-01-01T23:59:59.000Z

135

Hindawi Publishing Corporation Comparative and Functional Genomics  

E-Print Network [OSTI]

Hindawi Publishing Corporation Comparative and Functional Genomics Volume 2007, Article ID 47304, 7 pages doi:10.1155/2007/47304 Meeting Report eGenomics: Cataloguing Our Complete Genome Collection III, Michigan State University, East Lansing, MI 48824, USA 3 The Institute for Genomic Research, 9712 Medical

Newcastle upon Tyne, University of

136

Abstract SY36-01: Functional genomics and cancer dependencies  

Science Journals Connector (OSTI)

...CA Abstract SY36-01: Functional genomics and cancer dependencies William C. Hahn...Institute, Boston, MA. Recent advances in genomics continue to elucidate the genetic lesions...Format: William C. Hahn. Functional genomics and cancer dependencies. [abstract...

William C. Hahn

2014-10-01T23:59:59.000Z

137

Complete genome sequence of the halophilic and highly halotolerant Chromohalobacter salexigens type strain (1H11T)  

SciTech Connect (OSTI)

Chromohalobacter salexigens is one of nine currently known species of the genus Chromoha- lobacter in the family Halomonadaceae. It is the most halotolerant of the so-called mod- erately halophilic bacteria currently known and, due to its strong euryhaline phenotype, it is an established model organism for prokaryotic osmoadaptation. C. salexigens strain 1H11T and Halomonas elongata are the first and the second members of the family Halomonada- ceae with a completely sequenced genome. The 3,696,649 bp long chromosome with a total of 3,319 protein-coding and 93 RNA genes was sequenced as part of the DOE Joint Genome Institute Program DOEM 2004.

Copeland, A [U.S. Department of Energy, Joint Genome Institute; O'Connor, Kathleen [Purdue University; Lucas, Susan [U.S. Department of Energy, Joint Genome Institute; Lapidus, Alla L. [U.S. Department of Energy, Joint Genome Institute; Berry, Kerrie W. [United States Department of Energy Joint Genome Institute; Detter, J. Chris [U.S. Department of Energy, Joint Genome Institute; Glavina Del Rio, Tijana [U.S. Department of Energy, Joint Genome Institute; Hammon, Nancy [U.S. Department of Energy, Joint Genome Institute; Dalin, Eileen [U.S. Department of Energy, Joint Genome Institute; Tice, Hope [U.S. Department of Energy, Joint Genome Institute; Pitluck, Sam [U.S. Department of Energy, Joint Genome Institute; Bruce, David [Los Alamos National Laboratory (LANL); Goodwin, Lynne A. [Los Alamos National Laboratory (LANL); Han, Cliff [Los Alamos National Laboratory (LANL); Tapia, Roxanne [Los Alamos National Laboratory (LANL); Saunders, Elizabeth H [Los Alamos National Laboratory (LANL); Schmutz, Jeremy [Stanford University; Brettin, Thomas S [ORNL; Larimer, Frank W [ORNL; Land, Miriam L [ORNL; Hauser, Loren John [ORNL; Vargas, Carmen [University of Seville; Nieto, Joaquin J. [University of Seville; Kyrpides, Nikos C [U.S. Department of Energy, Joint Genome Institute; Ivanova, N [U.S. Department of Energy, Joint Genome Institute; Goker, Markus [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany; Klenk, Hans-Peter [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany; Csonka, Laszlo N. [Purdue University; Woyke, Tanja [U.S. Department of Energy, Joint Genome Institute

2011-01-01T23:59:59.000Z

138

THE CAMPAIGN FOR UC SANTA CRUZ THE GENOMICS  

E-Print Network [OSTI]

THE CAMPAIGN FOR UC SANTA CRUZ THE GENOMICS INSTITUTE #12;OVERVIEW The UC Santa Cruz Genomics Institute provides the framework for the next great leap in the science of genomics. ensured it would genomic science and speed the benefits of discoveries that improve and save lives. Cancer, autoimmune

California at Santa Cruz, University of

139

Patrick T. McGowen, P.E., Ph.D. Research Engineer, Western Transportation Institute / Civil Engineering  

E-Print Network [OSTI]

jointly appointed between the Western Transportation Institute (WTI) and Civil Engineering Department

McGowen, Patrick

140

Safety Monitor Joint Working Group (JWG) Tour  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

4 th Meeting of the Joint Working Group of the U.S.-Japan Coordinating Committee of Fusion Energy on Safety in Inter-Institutional Collaborations (U.S.-Japan Safety Monitoring...

Note: This page contains sample records for the topic "joint genome institute" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


141

From genome to proteome: developing expression clone resources for the human genome  

E-Print Network [OSTI]

From genome to proteome: developing expression clone resources for the human genome Gary Temple1 Mammalian Gene Collection, National Human Genome Research Institute and 2 National Center for Biotechnology human genome sequence, it has become possible and highly productive to compare the sequences of m

142

NERSC and JGI Join Forces to Tackle Genomics HPC - NERSC Center News, Apr  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

NERSC and JGI Join NERSC and JGI Join Forces to Tackle Genomics HPC NERSC and JGI Join Forces to Tackle Genomics HPC April 19, 2010 A torrent of data has been flowing from the advanced sequencing platforms at the Department of Energy Joint Genome Institute (JGI), among the world's leading generators of DNA sequence information for bioenergy and environmental applications. Last year, JGI generated over one trillion nucleotide letters of genetic code for its various user programs, an eight-fold increase in productivity from 2008. This year JGI expects to sequence five-times more data than the previous year, producing more than a petabyte of data. Kathy Yelick and Eddy Rubin in front of Cray XT5 supercomputer NERSC Division Director Kathy Yelick (left) and JGI Director Eddy Rubin

143

Diatom Genome Helps Explain Their Great Diversity and Success in Trapping  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

5, 2008 5, 2008 Diatom Genome Helps Explain Their Great Diversity and Success in Trapping Excess Carbon in Oceans WALNUT CREEK, CA-Diatoms, mighty microscopic algae, have profound influence on climate, producing 20 percent of the oxygen we breathe by capturing atmospheric carbon and in so doing, countering the greenhouse effect. Since their evolutionary origins these photosynthetic wonders have come to acquire advantageous genes from bacterial, animal and plant ancestors enabling them to thrive in today's oceans. These findings, based on the analysis of the latest sequenced diatom genome, Phaeodactylum tricornutum, are published in 15 October edition of the journal Nature by an international team of researchers led by the U.S. Department of Energy Joint Genome Institute (DOE JGI) and the Ecole Normale Supérieure of

144

Complete genome sequence of the sulfate-reducing firmicute Desulfotomaculum ruminis type strain (DLT)  

SciTech Connect (OSTI)

Desulfotomaculum ruminis Campbell and Postgate 1965 is a member of the large genus Desulfotomaculum which contains 30 species and is contained in the family Peptococcaceae. This species is of interest because it represents one of the few sulfate- reducing bacteria that have been isolated from the rumen. Here we describe the features of D. ruminis together with the complete genome sequence and annotation. The 3,969,014 bp long chromosome with a total of 3,901 protein-coding and 85 RNA genes is the second completed genome sequence of a type strain of the genus Desulfotomaculum to be pub- lished, and was sequenced as part of the DOE Joint Genome Institute Community Sequencing Program 2009.

Spring, Stefan [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany; Visser, Michael [Wageningen University and Research Centre, The Netherlands; Lu, Megan [Los Alamos National Laboratory (LANL); Copeland, A [U.S. Department of Energy, Joint Genome Institute; Lapidus, Alla L. [U.S. Department of Energy, Joint Genome Institute; Lucas, Susan [U.S. Department of Energy, Joint Genome Institute; Cheng, Jan-Fang [U.S. Department of Energy, Joint Genome Institute; Han, Cliff [Los Alamos National Laboratory (LANL); Tapia, Roxanne [Los Alamos National Laboratory (LANL); Goodwin, Lynne A. [Los Alamos National Laboratory (LANL); Pitluck, Sam [U.S. Department of Energy, Joint Genome Institute; Ivanova, N [U.S. Department of Energy, Joint Genome Institute; Land, Miriam L [ORNL; Hauser, Loren John [ORNL; Larimer, Frank W [ORNL; Rohde, Manfred [HZI - Helmholtz Centre for Infection Research, Braunschweig, Germany; Goker, Markus [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany; Detter, J. Chris [U.S. Department of Energy, Joint Genome Institute; Kyrpides, Nikos C [U.S. Department of Energy, Joint Genome Institute; Woyke, Tanja [U.S. Department of Energy, Joint Genome Institute; Schaap, Peter J [Wageningen University and Research Centre, The Netherlands; Plugge, Caroline M. [Wageningen University and Research Centre, The Netherlands; Muyzer, Gerard [Universitate Amsterdam; Kuever, Jan [Bremen Institute for Materials Testing, Bremen, Germany; Pereira, Ines A. C. [Universidade Nova de Lisboa, Oeiras, Portugal; Parshina, Sofiya N. [Russian Academy of Sciences, Moscow; Bernier-Latmani, Rizlan [Ecole Polytechnique Federale de Lausanne, Switzerland; Stams, Alfons J. M. [Wageningen University and Research Centre, The Netherlands; Klenk, Hans-Peter [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany

2012-01-01T23:59:59.000Z

145

Accelerating Biofuel Feedstock Crop Improvement with Miscanthus Genomics (2014 DOE JGI Genomics of Energy & Environment Meeting)  

SciTech Connect (OSTI)

Kankshita Swaminathan of the Energy Biosciences Institute speaks at the 9th Annual Genomics of Energy & Environment Meeting on March 20, 2014 in Walnut Creek, Calif.

Swaminathan, Kankshita [Energy Biosciences Institute

2014-03-20T23:59:59.000Z

146

Meeting report The changing face of genomics  

E-Print Network [OSTI]

this technology into studying transcriptional regulator binding in the human genome, with applicationsMeeting report The changing face of genomics Manolis Kellis Address: The Broad Institute AGBT / AMS meeting on Advances in Genome Biology & Technology Marco Island, Florida, USA, February 4

Kellis, Manolis

147

Joint Announcement  

Broader source: Energy.gov (indexed) [DOE]

Announcement Announcement Hurricane Relief on Federal Research Awards Updated October 5, 2005 Federal research agencies, the Office of Management and Budget (OMB), and the Office of Science and Technology Policy are coordinating activities with institutions and individuals in the Gulf region to restore the high quality of research, research training, and science education supported by Federal grants and other assistance awards. Some of the most important actions that can be taken to address resumption of research activities and to address critical research resources are being dealt with on a project by project basis. Individuals who have not been able contact their institution or organization are encouraged to do so, or to check their institution's

148

Institute for Advanced Studies  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Institute for Advanced Studies Institute for Advanced Studies Institute for Advanced Studies NMC leverages the strengths of three research universities to build joint programs, develop strategic partnerships, provide common organization and facilities. Contact Leader TBD LANL Program Administrator Pam Hundley (505) 663-5453 Email Building regional partnerships in education, leveraging strengths of three research universities The Institute for Advanced Studies (IAS) works with the three New Mexico research universities (University of New Mexico, New Mexico Tech, and New Mexico State University) to develop research and educational collaborations and partnerships. To facilitate interactions between the universities and LANL, the three New Mexico schools established the New Mexico Consortium (NMC), a nonprofit

149

Structural Genomics  

Science Journals Connector (OSTI)

Structural Genomics ... Structural genomics is the field of science focused on the systematic determination of the three-dimensional structure of the proteins encoded into genomes. ... Structural genomics is spreading the philosophy of high throughput in all fields of science and making available new tools to speed up research procedures. ...

Ivano Bertini

2003-03-01T23:59:59.000Z

150

Discovering Geometric Patterns in Genomic Data Wenxuan Gao  

E-Print Network [OSTI]

Discovering Geometric Patterns in Genomic Data Wenxuan Gao Department of Computer Science University of Illinois at Chicago wgao5@uic.edu Christopher Brown Institute for Genomics & Systems Biology caseybrown@uchicago.edu Robert L. Grossman Institute for Genomics & Systems Biology robert.grossman @uchicago

Grossman, Robert

151

Ariana Beste Joint Institute for Computational Sciences  

E-Print Network [OSTI]

description of the entropic contribution to rate constants and Gibbs free energies. Ariana is also exploring, 1999 Philipps-Universität Marburg, Germany Computer Science AS, 1999 University of Florida, Gainesville of Fuel Chemistry, R. A. Glenn Award Brief Research Synopsis Research interests include the computation

Pennycook, Steve

152

2013 REU Program in Computational Neuropsychiatric Genomics research experiences for undergraduates  

E-Print Network [OSTI]

2013 REU Program in Computational Neuropsychiatric Genomics research experiences for undergraduates University of Illinois at Chicago University of Haifa Harvard Medical School IGSB Institute for Genomics & Systems Biology #12;2013 REU Program in Computational Neuropsychiatric Genomics research experiences

Kemner, Ken

153

2015 REU Program in Computational Neuropsychiatric Genomics research experiences for undergraduates  

E-Print Network [OSTI]

2015 REU Program in Computational Neuropsychiatric Genomics research experiences for undergraduates Harvard Medical School ! IGSB Institute for Genomics & Systems Biology www.contechicago.org #12;2015 REU Program in Computational Neuropsychiatric Genomics research experiences for undergraduates The Conte

Kemner, Ken

154

Functional genomics as a window on radiation stress signaling Sally A Amundson*,1  

E-Print Network [OSTI]

Functional genomics as a window on radiation stress signaling Sally A Amundson*,1 , Michael Bittner 20892, USA; 2 National Human Genome Research Institute, National Institutes of Health, Bethesda, MD before the completion of the human genome draft sequence, a number of techniques for genomic expression

155

Flexibility and Symmetry of Prokaryotic Genome Rearrangement Reveal Lineage-Associated Core-Gene-Defined Genome Organizational Frameworks  

Science Journals Connector (OSTI)

...big.ac.cn . a CAS Key Laboratory of Genome Sciences and Information, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing, Peoples Republic of China b College of Computer Science, Sichuan University, Chengdu, Peoples Republic...

Yu Kang; Chaohao Gu; Lina Yuan; Yue Wang; Yanmin Zhu; Xinna Li; Qibin Luo; Jingfa Xiao; Daquan Jiang; Minping Qian; Aftab Ahmed Khan; Fei Chen; Zhang Zhang; Jun Yu

2014-12-01T23:59:59.000Z

156

Ancient genomics  

Science Journals Connector (OSTI)

...2015 review-article PART IV: ANCIENT GENOMICS 1001 70 198 Discussion meeting issue...author and source are credited. Ancient genomics Clio Der Sarkissian Morten E. Allentoft...field of aDNA has entered the new era of genomics and has provided valuable information...

2015-01-01T23:59:59.000Z

157

Complete genome sequence of Tolumonas auensis type strain (TA 4T)  

SciTech Connect (OSTI)

Tolumonas auensis Fischer-Romero et al. 1996 is currently the only validly named species of the genus Tolumonas in the family Aeromonadaceae. The strain is of interest because of its ability to produce toluene from phenylalanine and other phenyl precursors, as well as phenol from tyrosine. This is of interest because toluene is normally considered to be a tracer of anthropogenic pollution in lakes, but T. auensis represents a biogenic source of toluene. Oth- er than Aeromonas hydrophila subsp. hydrophila, T. auensis strain TA 4T is the only other member in the family Aeromonadaceae with a completely sequenced type-strain genome. The 3,471,292 bp chromosome with a total of 3,288 protein-coding and 116 RNA genes was sequenced as part of the DOE Joint Genome Institute Program JBEI 2008.

Chertkov, Olga [Los Alamos National Laboratory (LANL); Copeland, A [U.S. Department of Energy, Joint Genome Institute; Lucas, Susan [U.S. Department of Energy, Joint Genome Institute; Lapidus, Alla L. [U.S. Department of Energy, Joint Genome Institute; Berry, Alison M [California Institute of Technology, University of California, Davis; Detter, J. Chris [U.S. Department of Energy, Joint Genome Institute; Glavina Del Rio, Tijana [U.S. Department of Energy, Joint Genome Institute; Hammon, Nancy [U.S. Department of Energy, Joint Genome Institute; Dalin, Eileen [U.S. Department of Energy, Joint Genome Institute; Tice, Hope [U.S. Department of Energy, Joint Genome Institute; Pitluck, Sam [U.S. Department of Energy, Joint Genome Institute; Richardson, P M [U.S. Department of Energy, Joint Genome Institute; Bruce, David [Los Alamos National Laboratory (LANL); Goodwin, Lynne A. [Los Alamos National Laboratory (LANL); Han, Cliff [Los Alamos National Laboratory (LANL); Tapia, Roxanne [Los Alamos National Laboratory (LANL); Saunders, Elizabeth H [Los Alamos National Laboratory (LANL); Schmutz, Jeremy [Stanford University; Brettin, Thomas S [ORNL; Larimer, Frank W [ORNL; Land, Miriam L [ORNL; Hauser, Loren John [ORNL; Spring, Stefan [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany; Rohde, Manfred [HZI - Helmholtz Centre for Infection Research, Braunschweig, Germany; Kyrpides, Nikos C [U.S. Department of Energy, Joint Genome Institute; Ivanova, N [U.S. Department of Energy, Joint Genome Institute; Goker, Markus [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany; Beller, Harry R. [Lawrence Berkeley National Laboratory (LBNL); Klenk, Hans-Peter [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany; Woyke, Tanja [U.S. Department of Energy, Joint Genome Institute

2011-01-01T23:59:59.000Z

158

Complete genome sequence of Tolumonas auensis type strain (TA 4T)  

SciTech Connect (OSTI)

Tolumonas auensis (Fischer-Romero et al. 1996) is currently the only validly named species of the genus Tolumonas in the family Aeromonadaceae. The strain is of interest because of its ability to produce toluene from phenylalanine and other phenyl precursors, as well as phenol from tyrosine. This is of interest because toluene is normally considered to be a tracer of anthropogenic pollution in lakes, but T. auensis represents a biogenic source of toluene. Other than Aeromonas hydrophila subsp. hydrophila, T. auensis strain TA 4T is the only other member in the family Aeromonadaceae with a completely sequenced type-strain genome. The 3,471,292-bp chromosome with a total of 3,288 protein-coding and 116 RNA genes was sequenced as part of the DOE Joint Genome Institute Program JBEI 2008.

Chertkov, Olga; Copeland, Alex; Lucas1, Susa; Lapidus, Alla; Berry, KerrieW.; Detter, JohnC.; Glavina Del Rio, Tijana; Hammon, Nancy; Dalin, Eileen; Tice, Hope; Pitluck, Sam; Richardson, Paul; Bruce, David; Goodwin, Lynne; Han, Cliff; Tapia, Roxanne; Saunders, Elizabeth; Schmutz, Jeremy; Brettin, Thomas; Larimer, Frank; Land, Miriam; Hauser, Loren; Spring, Stefan; Rohde, Manfred; Kyrpides, NikosC.; Ivanova, Natalia; Göker, Markus; Beller, HarryR.; Klenk, Hans-Peter; Woyke, Tanja

2011-10-04T23:59:59.000Z

159

Argonne Accelerator Institute  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Useful Links Useful Links Argonne National Laboratory Accelerator Sites Conferences Advanced Photon Source (APS) Argonne Wakefield Accelerator (AWA) Argonne Tandem Linear Accelerator System (ATLAS) High Energy Physics Division RIA (????) Link to JACoW (Joint Accelerator Conferences Website) Fermi National Accelerator Laboratory Fermilab-Argonne Collaboration Accelerator Physics Center Workshops Other Accelerator Institutes Energy Recovering Linacs Center for Advance Studies of Accelerators (Jefferson Labs) Center for Beam Physics (LBNL) Accelerator Test Facility (BNL) The Cockcroft Institute (Daresbury, UK) John Adams Institute (Rutherford, UK) ERL2009 to be held at Cornell ERL2007 ERL2005 DOE Laboratory with Accelerators Fermilab Stanford Linear Accelerator Center Brookhaven National Laboratory

160

Complete genome sequence of Nitrosomonas sp. Is79, an ammonia oxidizing bacterium adapted to low ammonium concentrations  

SciTech Connect (OSTI)

Nitrosomonas sp. Is79 is a chemolithoautotrophic ammonia-oxidizing bacterium that belongs to the family Nitrosomonadaceae within the phylum Proteobacteria. Ammonia oxidation is the first step of nitrification, an important process in the global nitrogen cycle ultimately resulting in the production of nitrate. Nitrosomonas sp. Is79 is an ammonia oxidizer of high interest because it is adapted to low ammonium and can be found in freshwater environments around the world. The 3,783,444-bp chromosome with a total of 3,553 protein coding genes and 44 RNA genes was sequenced by the DOE-Joint Genome Institute Program CSP 2006.

Bollmann, Annette [Miami University, Oxford, OH; Sedlacek, Christopher J [Miami University, Oxford, OH; Laanbroek, Hendrikus J [Netherlands Institute of Ecology (NIOO-KNAW); Suwa, Yuichi [Chuo University, Tokyo, Japan; Stein, Lisa Y [University of California, Riverside; Klotz, Martin G [University of Louisville, Louisville; Arp, D J [Oregon State University; Sayavedra-Soto, LA [Oregon State University; Lu, Megan [Los Alamos National Laboratory (LANL); Bruce, David [Los Alamos National Laboratory (LANL); Detter, J. Chris [U.S. Department of Energy, Joint Genome Institute; Tapia, Roxanne [Los Alamos National Laboratory (LANL); Han, James [U.S. Department of Energy, Joint Genome Institute; Woyke, Tanja [U.S. Department of Energy, Joint Genome Institute; Lucas, Susan [U.S. Department of Energy, Joint Genome Institute; Pitluck, Sam [U.S. Department of Energy, Joint Genome Institute; Pennacchio, Len [U.S. Department of Energy, Joint Genome Institute; Nolan, Matt [U.S. Department of Energy, Joint Genome Institute; Land, Miriam L [ORNL; Huntemann, Marcel [U.S. Department of Energy, Joint Genome Institute; Deshpande, Shweta [U.S. Department of Energy, Joint Genome Institute; Han, Cliff [Los Alamos National Laboratory (LANL); Chen, Amy [U.S. Department of Energy, Joint Genome Institute; Kyrpides, Nikos C [U.S. Department of Energy, Joint Genome Institute; Mavromatis, K [U.S. Department of Energy, Joint Genome Institute; Markowitz, Victor [U.S. Department of Energy, Joint Genome Institute; Szeto, Ernest [U.S. Department of Energy, Joint Genome Institute; Ivanova, N [U.S. Department of Energy, Joint Genome Institute; Mikhailova, Natalia [U.S. Department of Energy, Joint Genome Institute; Pagani, Ioanna [U.S. Department of Energy, Joint Genome Institute; Pati, Amrita [U.S. Department of Energy, Joint Genome Institute; Peters, Lin [U.S. Department of Energy, Joint Genome Institute; Ovchinnikova, Galina [U.S. Department of Energy, Joint Genome Institute; Goodwin, Lynne A. [Los Alamos National Laboratory (LANL)

2013-01-01T23:59:59.000Z

Note: This page contains sample records for the topic "joint genome institute" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
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161

E-Print Network 3.0 - ams-ims-siam joint summer Sample Search...  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

results for: ams-ims-siam joint summer Page: << < 1 2 3 4 5 > >> 1 Kevin Woods Curriculum Vitae Assistant Professor Summary: , Massachusetts Institute of Technology, October...

162

Genome duplications (polyploidy) / ancientGenome duplications (polyploidy) / ancient genome duplications (genome duplications (paleopolyploidypaleopolyploidy))  

E-Print Network [OSTI]

Genome duplications (polyploidy) / ancientGenome duplications (polyploidy) / ancient genome duplications (genome duplications (paleopolyploidypaleopolyploidy)) Mechanism? e.g. a diploid cell undergoes;Paramecium genome duplicationsParamecium genome duplications #12;Comparison of two scaffolds originating from

Utrecht, Universiteit

163

FACULTY ASSOCIATION Indian Institute of Science, Bangalore-560 012  

E-Print Network [OSTI]

FACULTY ASSOCIATION Indian Institute of Science, Bangalore-560 012 (Registered under Karnataka. Secretary : Dr. Phaneendra Yalavarthy Vice President : Prof. G. Mohan Rao Joint Secretary : Dr. Manojit

Srinivasan, N.

164

Link Alpha J  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

BioEnergy Institute JCAP: Joint Center for Artificial Photosynthesis JDEM: The Joint Dark Energy Mission JGI: Joint Genome Institute Job Descriptions Job Hazards Analysis (JHA Help...

165

Sandia National Laboratories: "Bionic" Liquids from Lignin: Joint...  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Energy and ClimateECEnergyRenewable EnergyBiofuels"Bionic" Liquids from Lignin: Joint BioEnergy Institute Results Pave the Way for Closed-Loop Biofuel Refineries "Bionic" Liquids...

166

Butt Joint Tool Commissioning  

SciTech Connect (OSTI)

ITER Central Solenoid uses butt joints for connecting the pancakes in the CS module. The principles of the butt joining of the CICC were developed by the JAPT during CSMC project. The difference between the CSMC butt joint and the CS butt joint is that the CS butt joint is an in-line joint, while the CSMC is a double joint through a hairpin jumper. The CS butt joint has to carry the hoop load. The straight length of the joint is only 320 mm, and the vacuum chamber around the joint has to have a split in the clamp shell. These requirements are challenging. Fig.1 presents a CSMC joint, and Fig.2 shows a CS butt joint. The butt joint procedure was verified and demonstrated. The tool is capable of achieving all specified parameters. The vacuum in the end was a little higher than the target, which is not critical and readily correctable. We consider, tentatively that the procedure is established. Unexpectedly, we discover significant temperature nonuniformity in the joint cross section, which is not formally a violation of the specs, but is a point of concern. All testing parameters are recorded for QA purposes. We plan to modify the butt joining tool to improve its convenience of operation and provide all features necessary for production of butt joints by qualified personnel.

Martovetsky, N N

2007-12-06T23:59:59.000Z

167

Institutional INSTITUTIONAL DATA BOOK  

E-Print Network [OSTI]

that institutions provide for their learning and personal development. The University of Minnesota is an equal ORGANIZATIONAL STRUCTURE UMM Organizational Chart as of August 2009

Minnesota, University of

168

Genome Engineering  

SciTech Connect (OSTI)

Dan Voytas, University of Minnesota, at the 9th Annual Genomics of Energy & Environment Meeting on March 20, 2014 in Walnut Creek, Calif

Voytas, Dan [University of Minnesota

2014-03-20T23:59:59.000Z

169

Joint Center for Artificial Photosynthesis  

ScienceCinema (OSTI)

The Joint Center for Artificial Photosynthesis (JCAP) is the nation's largest research program dedicated to the development of an artificial solar-fuel generation technology. Established in 2010 as a U.S. Department of Energy (DOE) Energy Innovation Hub, JCAP aims to find a cost-effective method to produce fuels using only sunlight, water, and carbon dioxide as inputs. JCAP brings together more than 140 top scientists and researchers from the California Institute of Technology and its lead partner, Berkeley Lab, along with collaborators from the SLAC National Accelerator Laboratory, and the University of California campuses at Irvine and San Diego.

Koval, Carl; Lee, Kenny; Houle, Frances; Lewis, Nate

2013-12-19T23:59:59.000Z

170

Joint Center for Artificial Photosynthesis  

SciTech Connect (OSTI)

The Joint Center for Artificial Photosynthesis (JCAP) is the nation's largest research program dedicated to the development of an artificial solar-fuel generation technology. Established in 2010 as a U.S. Department of Energy (DOE) Energy Innovation Hub, JCAP aims to find a cost-effective method to produce fuels using only sunlight, water, and carbon dioxide as inputs. JCAP brings together more than 140 top scientists and researchers from the California Institute of Technology and its lead partner, Berkeley Lab, along with collaborators from the SLAC National Accelerator Laboratory, and the University of California campuses at Irvine and San Diego.

Koval, Carl; Lee, Kenny; Houle, Frances; Lewis, Nate

2013-12-10T23:59:59.000Z

171

Comparative genomics and genome evolution in yeasts  

Science Journals Connector (OSTI)

...Sternberg and Janet Thornton Comparative genomics and genome evolution in yeasts Kenneth...powerful model system for comparative genomics research. The availability of multiple...cerevisiae |evolution|bioinformatics|genomics| 1. Introduction The rationale put...

2006-01-01T23:59:59.000Z

172

Genome sequence of the chemoheterotrophic soil bacterium Saccharomonospora cyanea type strain (NA-134(T))  

SciTech Connect (OSTI)

Saccharomonospora cyanea Runmao et al. 1988 is a member of the genus Saccharomonospora in the family Pseudonocardiaceae that is moderately well characterized at the genome level thus far. Members of the genus Saccharomonospora are of interest because they originate from diverse habitats, such as soil, leaf litter, manure, compost, surface of peat, moist, over-heated grain, and ocean sediment, where they probably play a role in the primary degradation of plant material by attacking hemicellulose. Species of the genus Saccharomonospora are usually Gram-positive, non-acid fast, and are classified among the actinomycetes. S. cyanea is characterized by a dark blue (= cyan blue) aerial mycelium. After S. viridis, S. azurea, and S. marina, S. cyanea is only the fourth member in the genus for which a completely sequenced (non-contiguous finished draft status) type strain genome will be published. Here we describe the features of this organism, together with the draft genome sequence, and annotation. The 5,408,301 bp long chromosome with its 5,139 protein-coding and 57 RNA genes was sequenced as part of the DOE funded Community Sequencing Program (CSP) 2010 at the Joint Genome Institute (JGI).

Meier-Kolthoff, Jan P. [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany] [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany; Lu, Megan [Los Alamos National Laboratory (LANL)] [Los Alamos National Laboratory (LANL); Huntemann, Marcel [U.S. Department of Energy, Joint Genome Institute] [U.S. Department of Energy, Joint Genome Institute; Lucas, Susan [U.S. Department of Energy, Joint Genome Institute] [U.S. Department of Energy, Joint Genome Institute; Lapidus, Alla L. [U.S. Department of Energy, Joint Genome Institute] [U.S. Department of Energy, Joint Genome Institute; Copeland, A [U.S. Department of Energy, Joint Genome Institute] [U.S. Department of Energy, Joint Genome Institute; Pitluck, Sam [U.S. Department of Energy, Joint Genome Institute] [U.S. Department of Energy, Joint Genome Institute; Goodwin, Lynne A. [Los Alamos National Laboratory (LANL)] [Los Alamos National Laboratory (LANL); Han, Cliff [Los Alamos National Laboratory (LANL)] [Los Alamos National Laboratory (LANL); Tapia, Roxanne [Los Alamos National Laboratory (LANL)] [Los Alamos National Laboratory (LANL); Potter, Gabriele [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany] [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany; Land, Miriam L [ORNL] [ORNL; Ivanova, N [U.S. Department of Energy, Joint Genome Institute] [U.S. Department of Energy, Joint Genome Institute; Rohde, Manfred [HZI - Helmholtz Centre for Infection Research, Braunschweig, Germany] [HZI - Helmholtz Centre for Infection Research, Braunschweig, Germany; Goker, Markus [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany] [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany; Detter, J. Chris [U.S. Department of Energy, Joint Genome Institute] [U.S. Department of Energy, Joint Genome Institute; Woyke, Tanja [U.S. Department of Energy, Joint Genome Institute] [U.S. Department of Energy, Joint Genome Institute; Kyrpides, Nikos C [U.S. Department of Energy, Joint Genome Institute] [U.S. Department of Energy, Joint Genome Institute; Klenk, Hans-Peter [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany] [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany

2013-01-01T23:59:59.000Z

173

Complete genome sequence of Rhodospirillum rubrum type strain (S1T)  

SciTech Connect (OSTI)

Rhodospirillum rubrum (Esmarch 1887) Molisch 1907 is the type species of the genus Rho- dospirillum, which is the type genus of the family Rhodospirillaceae in the class Alphaproteo- bacteria. The species is of special interest because it is an anoxygenic phototroph that pro- duces extracellular elemental sulfur (instead of oxygen) while harvesting light. It contains one of the most simple photosynthetic systems currently known, lacking light harvesting complex 2. Strain S1T can grow on carbon monoxide as sole energy source. With currently over 1,750 PubMed entries, R. rubrum is one of the most intensively studied microbial species, in partic- ular for physiological and genetic studies. Next to R. centenum strain SW, the genome se- quence of strain S1T is only the second genome of a member of the genus Rhodospirillum to be published, but the first type strain genome from the genus. The 4,352,825 bp long chro- mosome and 53,732 bp plasmid with a total of 3,850 protein-coding and 83 RNA genes were sequenced as part of the DOE Joint Genome Institute Program DOEM 2002.

Munk, Christine [U.S. Department of Energy, Joint Genome Institute; Copeland, A [U.S. Department of Energy, Joint Genome Institute; Lucas, Susan [U.S. Department of Energy, Joint Genome Institute; Lapidus, Alla L. [U.S. Department of Energy, Joint Genome Institute; Glavina Del Rio, Tijana [U.S. Department of Energy, Joint Genome Institute; Barry, Kerrie [U.S. Department of Energy, Joint Genome Institute; Detter, J. Chris [U.S. Department of Energy, Joint Genome Institute; Hammon, Nancy [U.S. Department of Energy, Joint Genome Institute; Israni, Sanjay [U.S. Department of Energy, Joint Genome Institute; Pitluck, Sam [U.S. Department of Energy, Joint Genome Institute; Brettin, Thomas S [ORNL; Bruce, David [Los Alamos National Laboratory (LANL); Han, Cliff [Los Alamos National Laboratory (LANL); Tapia, Roxanne [Los Alamos National Laboratory (LANL); Gilna, Paul [University of California, La Jolla; Schmutz, Jeremy [Stanford University; Larimer, Frank W [ORNL; Land, Miriam L [ORNL; Kyrpides, Nikos C [U.S. Department of Energy, Joint Genome Institute; Mavromatis, K [U.S. Department of Energy, Joint Genome Institute; Richardson, P M [U.S. Department of Energy, Joint Genome Institute; Rohde, Manfred [HZI - Helmholtz Centre for Infection Research, Braunschweig, Germany; Goker, Markus [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany; Klenk, Hans-Peter [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany; Zhang, Yaoping [University of Wisconsin, Madison; Roberts, Gary P. [University of Wisconsin, Madison; Reslewic, Susan [University of Wisconsin, Madison; Schwartz, David C. [University of Wisconsin, Madison

2011-01-01T23:59:59.000Z

174

Genome sequence of the ocean sediment bacterium Saccharomonospora marina type strain (XMU15T)  

SciTech Connect (OSTI)

Saccharomonospora marina Liu et al. 2010 is a member to the genomically so far poorly characterized genus Saccharomonospora in the family Pseudonocardiaceae. Members of the genus Sacharomonospora are of interest because they originate from diverse habitats, such as leaf litter, manure, compost, surface of peat, moist, over-heated grain, and ocean sediment, where they might play a role in the primary degradation of plant material by attacking hemicellulose. Organisms belonging to the genus are usually Gram-positive staining, non-acid fast, and classify among the actinomycetes. Next to S. viridis and S. azurea, S. marina is the third member in the genus Saccharomonospora for with a completely sequenced (permanent draft status) type strain genome will be published. Here we describe the features of this organism, together with the complete genome sequence, and annotation. The 5,965,593 bp long chromosome with its 5,727 protein-coding and 57 RNA genes was sequenced as part of the DOE funded Community Sequencing Program (CSP) 2010 at the Joint Genome Institute (JGI).

Klenk, Hans-Peter [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany; Lu, Megan [Los Alamos National Laboratory (LANL); Lucas, Susan [U.S. Department of Energy, Joint Genome Institute; Copeland, A [U.S. Department of Energy, Joint Genome Institute; Pitluck, Sam [U.S. Department of Energy, Joint Genome Institute; Goodwin, Lynne A. [Los Alamos National Laboratory (LANL); Han, Cliff [Los Alamos National Laboratory (LANL); Tapia, Roxanne [Los Alamos National Laboratory (LANL); Brambilla, Evelyne-Marie [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany; Potter, Gabriele [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany; Land, Miriam L [ORNL; Ivanova, N [U.S. Department of Energy, Joint Genome Institute; Rohde, Manfred [HZI - Helmholtz Centre for Infection Research, Braunschweig, Germany; Goker, Markus [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany; Detter, J. Chris [U.S. Department of Energy, Joint Genome Institute; Li, Wen-Jun [Yunnan University, Kunming, China; Kyrpides, Nikos C [U.S. Department of Energy, Joint Genome Institute; Woyke, Tanja [U.S. Department of Energy, Joint Genome Institute

2012-01-01T23:59:59.000Z

175

Genome sequence of the soil bacterium Saccharomonospora azurea type strain (NA-128T)  

SciTech Connect (OSTI)

Saccharomonospora azurea Runmao et al. 1987 is a member to the genomically so far poorly characterized genus Saccharomonospora in the family Pseudonocardiaceae. Members of the genus Sacharomonosoras are of interest because they originate from diverse habitats, such as leaf litter, manure, compost, surface of peat, moist and over-heated grain, where they might play a role in the primary degradation of plant material by attacking hemicellulose. They are Gram-negative staining organisms classified among the usually Gram-positive actinomycetes. Next to S. viridis, S. azurea is only the second member in the genus Saccharomonospora for with a completely sequenced type strain genome will be published. Here we describe the features of this organism, together with the complete genome sequence with project status 'permanent draft', and annotation. The 4,763,832 bp long chromosome with its 4,472 protein-coding and 58 RNA genes was sequenced as part of the DOE funded Community Sequencing Program (CSP) 2010 at the Joint Genome Institute (JGI).

Klenk, Hans-Peter [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany; Held, Brittany [Los Alamos National Laboratory (LANL); Lucas, Susan [U.S. Department of Energy, Joint Genome Institute; Lapidus, Alla L. [U.S. Department of Energy, Joint Genome Institute; Copeland, A [U.S. Department of Energy, Joint Genome Institute; Hammon, Nancy [U.S. Department of Energy, Joint Genome Institute; Pitluck, Sam [U.S. Department of Energy, Joint Genome Institute; Goodwin, Lynne A. [Los Alamos National Laboratory (LANL); Han, Cliff [Los Alamos National Laboratory (LANL); Tapia, Roxanne [Los Alamos National Laboratory (LANL); Brambilla, Evelyne-Marie [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany; Potter, Gabriele [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany; Land, Miriam L [ORNL; Ivanova, N [U.S. Department of Energy, Joint Genome Institute; Rohde, Manfred [HZI - Helmholtz Centre for Infection Research, Braunschweig, Germany; Goker, Markus [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany; Detter, J. Chris [U.S. Department of Energy, Joint Genome Institute; Kyrpides, Nikos C [U.S. Department of Energy, Joint Genome Institute; Woyke, Tanja [U.S. Department of Energy, Joint Genome Institute

2012-01-01T23:59:59.000Z

176

Research in theResearch in the Joint Quantum InstituteJoint Quantum Institute  

E-Print Network [OSTI]

Coherent Quantum Phenomena · The Second Quantum Revolution ­ Beyond wave mechanics ­ Beyond quantized energies msingle Cd+ ion QC PlatformsQC Platforms SQUIDSSQUIDS Neutral Atoms in Optical Lattices Neutral Atoms construction Phillips, Porto, Rolston, Spielman Clark, Das Sarma, Galitski, Williams #12;Hybrid Quantum

Gruner, Daniel S.

177

Engineering Institute  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Institute Engineering Institute Engineering dynamics that include flight, vibration isolation for precision manufacturing, earthquake engineering, blast loading, signal processing,...

178

[Institutional logo] GENERAL INTERNATIONAL MEMORANDUM OF UNDERSTANDING  

E-Print Network [OSTI]

, technology transfer, publication, curriculum development, joint projects and training. It is contemplated1 [Institutional logo] GENERAL INTERNATIONAL MEMORANDUM OF UNDERSTANDING BETWEEN BOARD OF REGENTS through the Education Abroad Office. The transfer of information, faculty, or staff for education

Powers, Robert

179

Reconstructing large regions of an ancestral mammalian genome in silico  

E-Print Network [OSTI]

of California, Santa Cruz, California 95064, USA; 2 National Human Genome Research Institute, National.ucsc.edu/ancestors.] Following completion of the human genome sequence, there is now considerable interest in obtaining a more comprehensive understanding of its evolution (International Human Genome Sequencing Consortium [IHGSC] 2001

Miller, Webb

180

Potential of metabolomics as a functional genomics tool  

E-Print Network [OSTI]

Potential of metabolomics as a functional genomics tool Raoul J. Bino1,2,3 , Robert D. Hall2 3 Centre for BioSystems Genomics, POB 98, 6700 AB Wageningen, The Netherlands 4 Max-Planck Institute Australian Centre for Plant Functional Genomics, School of Botany, University of Melbourne, Victoria 3010

Wurtele, Eve Syrkin

Note: This page contains sample records for the topic "joint genome institute" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


181

Complete Genome Sequence of Paenibacillus strain Y4.12MC10, a Novel Paenibacillus lautus strain Isolated from Obsidian Hot Spring in Yellowstone National Park  

SciTech Connect (OSTI)

Paenibacillus speciesY412MC10 was one of a number of organisms initially isolated from Obsidian Hot Spring, Yellowstone National Park, Montana, USA. The isolate Y412MC10 was initially classified as a Geobacillus sp. based on its isolation conditions and similarity to other organisms isolated from hot springs at Yellowstone National Park. Comparison of 16 S rRNA sequences within the Bacillales indicated that Geobacillus sp.Y412MC10 clustered with Paenibacillus species and not Geobacillus; the 16S rRNA analysis indicated the organism was a strain of Paenibacillus lautus. Lucigen Corp. prepared genomic DNA and the genome was sequenced, assembled, and annotated by the DOE Joint Genome Institute. The genome of Paenibacillus lautus strain Y412MC10 consists of one circular chromosome of 7,121,665 bp with an average G+C content of 51.2%. The Paenibacillus sp.Y412MC10 genome sequence was deposited at the NCBI in October 2009 (NC{_}013406). Comparison to other Paenibacillus species shows the organism lacks nitrogen fixation, antibiotic production and social interaction genes reported in other Paenibacilli. Over 25% of the proteins predicted by the Y412MC10 genome share no identity with the closest sequenced Paenibacillus species; most of these are predicted hypothetical proteins and their specific function in the environment is unknown.

Mead, David [University of Wisconsin, Madison; Lucas, Susan [U.S. Department of Energy, Joint Genome Institute; Copeland, A [U.S. Department of Energy, Joint Genome Institute; Lapidus, Alla L. [U.S. Department of Energy, Joint Genome Institute; Cheng, Jan-Fang [U.S. Department of Energy, Joint Genome Institute; Bruce, David [Los Alamos National Laboratory (LANL); Goodwin, Lynne A. [Los Alamos National Laboratory (LANL); Pitluck, Sam [U.S. Department of Energy, Joint Genome Institute; Chertkov, Olga [Los Alamos National Laboratory (LANL); Zhang, Xiaojing [Los Alamos National Laboratory (LANL); Detter, J. Chris [U.S. Department of Energy, Joint Genome Institute; Han, Cliff [Los Alamos National Laboratory (LANL); Tapia, Roxanne [Los Alamos National Laboratory (LANL); Land, Miriam L [ORNL; Hauser, Loren John [ORNL; Chang, Yun-Juan [ORNL; Kyrpides, Nikos C [U.S. Department of Energy, Joint Genome Institute; Ivanova, N [U.S. Department of Energy, Joint Genome Institute; Ovchinnikova, Galina [U.S. Department of Energy, Joint Genome Institute; Woyke, Tanja [U.S. Department of Energy, Joint Genome Institute; Brumm, Catherine [United States Department of Energy Joint Genome Institute; Hochstein, Rebecca [Lucigen Corporation, Middleton, Wisconsin; Schoenfeld, Thomas [Lucigen Corporation, Middleton, Wisconsin; Brumm, Phillip [University of Wisconsin, Madison

2012-01-01T23:59:59.000Z

182

Genome Biology 2004, 5:R92 commentreviewsreportsdepositedresearchrefereedresearchinteractionsinformation  

E-Print Network [OSTI]

Federal Institute of Technology (ETH), Zurich. Colab, ETH, Zurich 8092, Switzerland. Seminar for Statistics, ETH, Zurich 8092, Switzerland. §Institute for Plant Sciences and Functional Genomics Center Zurich, ETH, Zurich 8092, Switzerland. ¶Computer Engineering and Networks Laboratory, ETH, Zurich 8092

Zitzler, Eckart

183

Comments of the Joint Center for Political and Economic Studies |  

Broader source: Energy.gov (indexed) [DOE]

Joint Center for Political and Economic Studies Joint Center for Political and Economic Studies Comments of the Joint Center for Political and Economic Studies The Media and Technology Institute and the Climate Change Initiative at the Joint Center for Political and Economic Studies ("Joint Center")1 respectfully submit these comments in response to the United States Department of Energy's ("DoE") Request for Information regarding its implementation of the Smart Grid provisions of Federal Communications Commission's ("FCC") National Broadband Plan. Comments of the Joint Center for Political and Economic Studies More Documents & Publications Re: NBP RFI: Data Access Implementing the National Broadband Plan by Empowering Consumers and the Smart Grid: Data Access, Third Party Use, and Privacy- Request for

184

Joint/Intercollege (Admin. Home)  

E-Print Network [OSTI]

) Genomic Sciences Master of Bioinformatics x (COS) Doctor of Philosophy Bioinformatics x (COS) Master of Science Functional Genomics x (COS) Master of Functional Genomics x (COS) Doctor of Philosophy Functional Genomics x (COS) #12;

Liu, Paul

185

Enhancing a Genome Database Using the XSB Tabled Logic Programming System  

E-Print Network [OSTI]

goal of the Human Genome Project 1] is to construct detailed physical maps of the human genome implementationof laboratory information systems developed at the Center for Genome Research in the Whitehead Research at the Whitehead Institute in MIT is engaged in several large-scale genome mapping projects

Davulcu, Hasan

186

Building on a Decade of Accomplishments Report of the 2010 Blue Ribbon Panel on Genomics  

E-Print Network [OSTI]

Building on a Decade of Accomplishments Report of the 2010 Blue Ribbon Panel on Genomics Division of Microbiology and Infectious Diseases, Genomics Programs National Institute of Allergy and Infectious Diseases Blue Ribbon Panel on Genomics Division of Microbiology and Infectious Diseases, Genomics Programs

Levin, Judith G.

187

Comparative Microbial Genomics group CenterforBiologicalSequenceanalysisDepartmentofSystemsBiology,TechnicalUniversityofDenmark  

E-Print Network [OSTI]

Comparative Microbial Genomics group CenterforBiologicalSequenceanalysisDepartmentofSystemsBiology,TechnicalUniversityofDenmark Burkholderia Pan-genomics Dave Ussery Max Planck Institut fur Terrestrial Microbiology Marburg, Germany 26 May, 2008 - or - What can we learn from more than 50 sequenced genomes? #12;Comparative Microbial Genomics

Ussery, David W.

188

Fungal Genomics Program  

E-Print Network [OSTI]

strains Comparative genomics and transcriptomics of xyloseFungal Genomics Program Igor Grigoriev 1 * (complex communities Fungal Genomics Program Igor Grigoriev

Grigoriev, Igor

2012-01-01T23:59:59.000Z

189

NMR and Structural Genomics  

Science Journals Connector (OSTI)

NMR and Structural Genomics ... The role of NMR in structural genomics is outlined, with particular emphasis on using protein domains as targets. ... Targets in Structural Genomics ...

David Staunton; Jo Owen; Iain D. Campbell

2002-12-07T23:59:59.000Z

190

Argonne Accelerator Institute  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Mission Mission The mission of the Argonne Accelerator Institute is centered upon the following related goals: Locate next generation accelerator facilities in Northern Illinois Advance accelerator technology Oversee a selected, strategic, lab-wide, and acclaimed accelerator R&D portfolio In order to accomplish the above goals, the institute has established five objectives. These are coupled to programmatic objectives, and are dependent on each other, but they serve to identify important areas for the institute to focus its activities. Educate the "next generation" of accelerator physicists and engineers Work with area Universities to establish Joint Appointments and Adjunct Professorships Identify students Provide research opportunities at Argonne Work with the US Particle Accelerator School

191

Development of Genomic and Genetic Tools for Foxtail Millet, and Use of These Tools in the Improvement of Biomass Production for Bioenergy Crops  

SciTech Connect (OSTI)

The overall aim of this research was to develop genomic and genetic tools in foxtail millet that will be useful in improving biomass production in bioenergy crops such as switchgrass, napier grass, and pearl millet. A variety of approaches have been implemented, and our lab has been primarily involved in genome analysis and quantitative genetic analysis. Our progress in these activities has been substantially helped by the genomic sequence of foxtail millet produced by the Joint Genome Institute (Bennetzen et al., in prep). In particular, the annotation and analysis of candidate genes for architecture, biomass production and flowering has led to new insights into the control of branching and flowering time, and has shown how closely related flowering time is to vegetative architectural development and biomass accumulation. The differences in genetic control identified at high and low density plantings have direct relevance to the breeding of bioenergy grasses that are tolerant of high planting densities. The developmental analyses have shown how plant architecture changes over time and may indicate which genes may best be manipulated at various times during development to obtain required biomass characteristics. This data contributes to the overall aim of significantly improving genetic and genomic tools in foxtail millet that can be directed to improvement of bioenergy grasses such as switchgrass, where it is important to maximize vegetative growth for greatest biomass production.

Doust, Andrew, N.

2011-11-11T23:59:59.000Z

192

High pressure ceramic joint  

DOE Patents [OSTI]

Many recuperators have components which react to corrosive gases and are used in applications where the donor fluid includes highly corrosive gases. These recuperators have suffered reduced life, increased service or maintenance, and resulted in increased cost. The present joint when used with recuperators increases the use of ceramic components which do not react to highly corrosive gases. Thus, the present joint used with the present recuperator increases the life, reduces the service and maintenance, and reduces the increased cost associated with corrosive action of components used to manufacture recuperators. The present joint is comprised of a first ceramic member, a second ceramic member, a mechanical locking device having a groove defined in one of the first ceramic member and the second ceramic member. The joint and the mechanical locking device is further comprised of a refractory material disposed in the groove and contacting the first ceramic member and the second ceramic member. The present joint mechanically provides a high strength load bearing joint having good thermal cycling characteristics, good resistance to a corrosive environment and good steady state strength at elevated temperatures.

Ward, Michael E. (Poway, CA); Harkins, Bruce D. (San Diego, CA)

1993-01-01T23:59:59.000Z

193

High pressure ceramic joint  

DOE Patents [OSTI]

Many recuperators have components which react to corrosive gases and are used in applications where the donor fluid includes highly corrosive gases. These recuperators have suffered reduced life, increased service or maintenance, and resulted in increased cost. The present joint when used with recuperators increases the use of ceramic components which do not react to highly corrosive gases. Thus, the present joint used with the present recuperator increases the life, reduces the service and maintenance, and reduces the increased cost associated with corrosive action of components used to manufacture recuperators. The present joint is comprised of a first ceramic member, a second ceramic member, a mechanical locking device having a groove defined in one of the first ceramic member and the second ceramic member. The joint and the mechanical locking device is further comprised of a refractory material disposed in the groove and contacting the first ceramic member and the second ceramic member. The present joint mechanically provides a high strength load bearing joint having good thermal cycling characteristics, good resistance to a corrosive environment and good steady state strength at elevated temperatures. 4 figures.

Ward, M.E.; Harkins, B.D.

1993-11-30T23:59:59.000Z

194

US/Brazil joint pilot project objectives  

SciTech Connect (OSTI)

This paper describes a joint US/Brazil pilot project for rural electrification, whose major goals are: to establish technical, institutional, and economic confidence in using renewable energy (PV and wind) to meet the needs of the citizens of rural Brazil; to establish on-going institutional, individual and business relationships necessary to implement sustainable programs and commitments; to lay the groundwork for larger scale rural electrification through the use of distributed renewable technologies. The projects have supported low power home lighting systems, lighting and refrigeration for schools and medical centers, and water pumping systems. This is viewed as a long term project, where much of the equipment will come from the US, but Brazil will be responsible for program management, and sharing data gained from the program. The paper describes in detail the Brazilian program which was instituted to support this phased project.

NONE

1997-12-01T23:59:59.000Z

195

UCSC cancer genomics browser.  

Science Journals Connector (OSTI)

...Chicago, IL Abstract 5087: UCSC Cancer Genomics Browser 2.0 Jingchun Zhu 1 Brian Craft...and analyze that data. The UCSC Cancer Genomics Browser (https://genome-cancer...enhances the interpretability of the cancer genomics information. UCSC Cancer Genomics Browser...

J Zhu; JZ Sanborn; T Wang; F Hsu; S Benz; C Szeto; L Esserman; D Haussler

2009-01-15T23:59:59.000Z

196

A Celebration of The Genome, 1953-2003  

Office of Scientific and Technical Information (OSTI)

Celebration of The Genome, 1953-2003 This April Join the National Institutes of Health and the Department of Energy in a month-long series of scientific, educational, cultural and...

197

Operational streamlining in a high-throughput genome sequencing center  

E-Print Network [OSTI]

Advances in medicine rely on accurate data that is rapidly provided. It is therefore critical for the Genome Sequencing platform of the Broad Institute of MIT and Harvard to continually strive to reduce cost, improve ...

Person, Kerry P. (Kerry Patrick)

2006-01-01T23:59:59.000Z

198

Landscape evolutionary genomics  

Science Journals Connector (OSTI)

...1001 60 70 129 Landscape evolutionary genomics David B. Lowry * * davidbryantlowry...com University Program in Genetics and Genomics, , Box 3565 Duke University Medical...genetics|adaptation|landscape ecology|genomics|natural selection|GIS| 1. Introduction...

2010-01-01T23:59:59.000Z

199

The Human Genome From human genome to other  

E-Print Network [OSTI]

genome to health Structural Genomics initiative #12;What is the Human Genome Project? · U.S. govtThe Human Genome Project From human genome to other genomes and to gene function June 2000 From that arise from genome research #12;The Human Genome Project Project began in 1990 as a $3 billion, 15-year

Linial, Michal

200

INI/WIMCS Joint FollowUp Meeting on COMPUTATIONAL CHALLENGES IN PARTIAL DIFFERENTIAL EQUATIONS  

E-Print Network [OSTI]

INI/WIMCS Joint Follow­Up Meeting on COMPUTATIONAL CHALLENGES IN PARTIAL DIFFERENTIAL EQUATIONS.1*) Session Chair: K. Morgan, Swansea University 1345 C. West, Institute Administrator, INI and T. Lyons

Note: This page contains sample records for the topic "joint genome institute" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


201

PhD Studies in Neutrinos in Cosmology Institute for Computational Cosmology and Institute for Particle Physics Phenomenology  

E-Print Network [OSTI]

and Institute for Particle Physics Phenomenology Neutrino physics has brought a new perspective phenomenology. It is a joint venture of Durham University and the UK Science and Technology Facilities Council

Wirosoetisno, Djoko

202

Joint probability of precipitation and discharge deficits in the Netherlands  

E-Print Network [OSTI]

Joint probability of precipitation and discharge deficits in the Netherlands Jules J. Beersma and T. Adri Buishand Royal Netherlands Meteorological Institute, De Bilt, The Netherlands Received 14 April] The Netherlands are situated at the downstream end of the Rhine River. A large part of the country can be supplied

Beersma, Jules

203

Complete genome sequence of Polynucleobacter necessarius subsp. asymbioticus type strain (QLW-P1DMWA-1T)  

SciTech Connect (OSTI)

Polynucleobacter necessarius subsp. asymbioticus Hahn et al. 2009 is one of currently two subspecies of P. necessarius. While P. necessarius subsp. asymbioticus is a free-living bacterium, the closely related second subspecies, P. necessarius subsp. necessarius is an obligate endosymbiont living in the cytoplasm of freshwater ciliates of the genus Euplotes aediculatus. The two P. necessarius subspecies were the closest thus far reported phylogenetic neighbors that differ in their lifestyle as obligately free-living vs. obligate endosymbiontic, and they are the only members of the genus Polynucleobacter with completely sequenced genomes. The genome-sequenced strain represents a group of closely related strains not distinguishable by 16S rRNA, 16S-23S ITS or glnA sequences, which is persistent in the home habitat of the strain and frequently contributes > 10% of total bacterial numbers in water samples of the habitat. The 2,159,490 bp long chromosome with a total of 2,088 protein-coding and 48 RNA genes was sequenced as part of the DOE Joint Genome Institute Community Sequencing Program 2006.

Meincke, Linda [Los Alamos National Laboratory (LANL); Copeland, A [U.S. Department of Energy, Joint Genome Institute; Lapidus, Alla L. [U.S. Department of Energy, Joint Genome Institute; Lucas, Susan [U.S. Department of Energy, Joint Genome Institute; Berry, Kerrie W. [United States Department of Energy Joint Genome Institute; Glavina Del Rio, Tijana [U.S. Department of Energy, Joint Genome Institute; Hammon, Nancy [U.S. Department of Energy, Joint Genome Institute; Dalin, Eileen [U.S. Department of Energy, Joint Genome Institute; Tice, Hope [U.S. Department of Energy, Joint Genome Institute; Pitluck, Sam [U.S. Department of Energy, Joint Genome Institute; Richardson, P M [U.S. Department of Energy, Joint Genome Institute; Bruce, David [Los Alamos National Laboratory (LANL); Goodwin, Lynne A. [Los Alamos National Laboratory (LANL); Han, Cliff [Los Alamos National Laboratory (LANL); Tapia, Roxanne [Los Alamos National Laboratory (LANL); Detter, J. Chris [U.S. Department of Energy, Joint Genome Institute; Schmutz, Jeremy [Stanford University; Brettin, Thomas S [ORNL; Larimer, Frank W [ORNL; Land, Miriam L [ORNL; Hauser, Loren John [ORNL; Kyrpides, Nikos C [U.S. Department of Energy, Joint Genome Institute; Ivanova, N [U.S. Department of Energy, Joint Genome Institute; Goker, Markus [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany; Woyke, Tanja [U.S. Department of Energy, Joint Genome Institute; Wu, Qinglong L. [Austrian Academy of Sciences, Institute for Limnology, Mondsee, Austria; Pockl, Matthias [Austrian Academy of Sciences, Institute for Limnology, Mondsee, Austria; Hahn, Martin W. [Austrian Academy of Sciences, Institute for Limnology, Mondsee, Austria; Klenk, Hans-Peter [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany

2012-01-01T23:59:59.000Z

204

Complete genome sequence of the filamentous gliding predatory bacterium Herpetosiphon aurantiacus type strain (114-95T)  

SciTech Connect (OSTI)

Herpetosiphon aurantiacus Holt and Lewin 1968 is the type species of the genus Herpetosiphon, which in turn is the type genus of the family Herpetosiphonaceae, type family of the order Herpe- tosiphonales in the phylum Chloroflexi. H. aurantiacus cells are organized in filaments which can rapidly glide. The species is of interest not only because of its rather isolated position in the tree of life, but also because Herpetosiphon ssp. were identified as predators capable of facultative pre- dation by a wolf pack strategy and of degrading the prey organisms by excreted hydrolytic en- zymes. The genome of H. aurantiacus strain 114-95T is the first completely sequenced genome of a member of the family Herpetosiphonaceae. The 6,346,587 bp long chromosome and the two 339,639 bp and 99,204 bp long plasmids with a total of 5,577 protein-coding and 77 RNA genes was sequenced as part of the DOE Joint Genome Institute Program DOEM 2005.

Kiss, Hajnalka [Los Alamos National Laboratory (LANL); Nett, Markus [Hans Knöll Institute, Jena, Germany; Domin, Nicole [Hans Knöll Institute, Jena, Germany; Martin, Karin [Hans Knöll Institute, Jena, Germany; Maresca, Julia A. [Pennsylvania State University, University Park, PA; Copeland, A [U.S. Department of Energy, Joint Genome Institute; Lapidus, Alla L. [U.S. Department of Energy, Joint Genome Institute; Lucas, Susan [U.S. Department of Energy, Joint Genome Institute; Berry, Kerrie W. [United States Department of Energy Joint Genome Institute; Glavina Del Rio, Tijana [U.S. Department of Energy, Joint Genome Institute; Dalin, Eileen [U.S. Department of Energy, Joint Genome Institute; Tice, Hope [U.S. Department of Energy, Joint Genome Institute; Pitluck, Sam [U.S. Department of Energy, Joint Genome Institute; Richardson, P M [U.S. Department of Energy, Joint Genome Institute; Bruce, David [Los Alamos National Laboratory (LANL); Goodwin, Lynne A. [Los Alamos National Laboratory (LANL); Han, Cliff [Los Alamos National Laboratory (LANL); Detter, J. Chris [U.S. Department of Energy, Joint Genome Institute; Schmutz, Jeremy [Stanford University; Brettin, Thomas S [ORNL; Land, Miriam L [ORNL; Hauser, Loren John [ORNL; Kyrpides, Nikos C [U.S. Department of Energy, Joint Genome Institute; Ivanova, N [U.S. Department of Energy, Joint Genome Institute; Goker, Markus [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany; Woyke, Tanja [U.S. Department of Energy, Joint Genome Institute; Klenk, Hans-Peter [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany; Bryant, Donald A. [Pennsylvania State University, University Park, PA

2011-01-01T23:59:59.000Z

205

Improved Yield and Diverse Finished Bacterial Genomes using Pacific Biosciences RS II SMRT Sequencing  

E-Print Network [OSTI]

Improved Yield and Diverse Finished Bacterial Genomes using Pacific Biosciences RS II SMRT-Cruz, Alvaro Godinez, Luke J. Tallon Institute for Genome Sciences, University of Maryland School of Medicine, effective, and highly accurate platform for generation of complete microbial genome sequences. As early

Weber, David J.

206

Integrating population genetics and conservation biology in the era of genomics  

Science Journals Connector (OSTI)

...and conservation biology in the era of genomics N. Joop Ouborg * * j.ouborg@science...Department of Molecular Ecology and Ecological Genomics, Institute for Water and Wetland Research...genetics is evolving into conservation genomics, while at the same time basic and applied...

2010-01-01T23:59:59.000Z

207

Bionimbus: a cloud for managing, analyzing and sharing large genomics datasets  

E-Print Network [OSTI]

of the software infrastructure required. Results Bionimbus is used by a variety of projects to process genomicsBionimbus: a cloud for managing, analyzing and sharing large genomics datasets Allison P Heath,1 Megan E McNerney,1,2 Kevin P White,1,3,4 Robert L Grossman1,3,5 1 Institute for Genomics and Systems

Grossman, Robert

208

Comparative Genomics of Transcriptional Control in the Human Malaria Parasite Plasmodium falciparum  

E-Print Network [OSTI]

Comparative Genomics of Transcriptional Control in the Human Malaria Parasite Plasmodium falciparum Richard M.R. Coulson,1,3 Neil Hall,2 and Christos A. Ouzounis1 1 Computational Genomics Group10 1SD, United Kingdom; 2 The Wellcome Trust Sanger Institute, The Wellcome Trust Genome Campus

Arnold, Jonathan

209

Engineering Institute  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Engineering Institute Engineering Institute Engineering Institute Engineering dynamics that include flight, vibration isolation for precision manufacturing, earthquake engineering, blast loading, signal processing, and experimental model analysis. Contact Leader, LANL Charles Farrar Email Leader, UCSD Michael Todd Email LANL Program Administrator Jutta Kayser (505) 663-5649 Email Collaboration for conducting mission-driven, multidisciplinary engineering research and recruiting, revitalization, and retention of current & future staff The Engineering Institute is a collaboration between LANL and the University of California at San Diego (UCSD) Jacobs School of Engineering, whose mission is to develop a comprehensive approach for conducting mission-driven, multidisciplinary engineering research

210

Joint Outreach Task Group Former Workers Screening Program | Department of  

Broader source: Energy.gov (indexed) [DOE]

Joint Joint Outreach Task Group Former Workers Screening Program Joint Outreach Task Group Former Workers Screening Program The Joint Outreach Task Group (JOTG) includes representatives from HSS, Department of Labor (DOL), the National Institute for Occupational Safety and Health (NIOSH), the Offices of the Ombudsman for DOL and NIOSH, and the DOE-funded FWP projects. The JOTG was established in 2009 under the premise that agencies/programs with common goals can work together by combining resources and coordinating outreach efforts. Each involved agency has a different mission, but the missions are complementary. By working together, the agencies are better able to serve the DOE workforce. The JOTG focuses on educating the former workers on the programs and resources available to them.

211

Weather and Joints  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Weather and Joints Weather and Joints Name: Brittany Location: N/A Country: N/A Date: N/A Question: Why do people feel the weather changin in their joints? Is it just a superstition? Replies: People feel weather changes in their bodies because storm systems are accompanied by lower air pressure. When a storm system is approaching the barometric pressure or air pressure will drop. Inside the body is air pressure also. The pressure inside the body is approximately 15 lbs per square inch. Normal air pressure on the outside is approximately the same. When both numbers are equal most people don't feel anything. However, when the low pressure system approaches or the air pressure drops, the pressure on the inside of the body is greater than outside and that air on the inside tries to get out because air flows from high pressure to low pressure. This causes swelling and discomfort in some people's joints, especially in the elderly or people who have suffered injuries to those areas (those areas are weakened somewhat due to the injury and less resistant to the changes in pressure).

212

Personal Genomics, Personalized Medicine,  

E-Print Network [OSTI]

Personal Genomics, Personalized Medicine, & YOU Carrie Iwema, PhD, MLS 21st May 2012 AAAS/Science Translational Medicine panel discussion; MLA 2012 #12;Timeline: Human Genome Sequence HSLS, U.Pitt 1995 2014 2000 2003 2007 2007 2010 Human Genome Draft Sequence Complete Human Reference Genome Individual Human

Napp, Nils

213

Metagenomic and Metaproteomic Analyses of Symbioses between Bacteria and Gutless Marine Worms (2014 DOE JGI Genomics of Energy & Environment Meeting)  

SciTech Connect (OSTI)

Nicole Dubilier of the Max Planck Institute speaks at the 9th Annual Genomics of Energy & Environment Meeting on March 20, 2014 in Walnut Creek, Calif.

Dubilier, Nicole [Max Planck Institute

2014-03-19T23:59:59.000Z

214

Institutional Controls  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Institutional Controls Institutional Controls Many major Federal laws (e.g., Atomic Energy Act (AEA), Resource Conservation Recovery Act (RCRA), Comprehensive Environmental Response, Compensation and Liability Act (CERCLA)), Executive Orders, regulations and various other drivers influence the use of institutional controls at DOE sites. Some drivers directly authorize or require the use of institutional controls, while others do not. DOE also uses institutional controls when no specific statutory requirement exists to supplement active remediation, pollution control, public and resource protection, and physical security, or to bolster the integrity of engineered remedies. DOE and its predecessor agencies have conducted activities for over 50 years, using land ownership and access control, environmental monitoring and surveillance, and other tools to support protection efforts at operational and inactive facilities, including radioactive waste burial grounds.

215

July 27, 2012 Dionysios A. Antonopoulos, Ph.D.  

E-Print Network [OSTI]

July 27, 2012 Dionysios A. Antonopoulos, Ph.D. Argonne National Laboratory Institute for Genomics, Institute for Genomics & Systems Biology, Biosciences Division, Argonne National Laboratory (joint, Institute for Genomics & Systems Biology 2008- Digestive Diseases Research Core Center (DDRCC) ACADEMIC

Kemner, Ken

216

III JOINT SYMPOSIUM OF TAIWAN-RUSSIA RESEARCH COOPERATION ON ADVANCED PROBLEMS IN  

E-Print Network [OSTI]

.. III - « , » III JOINT SYMPOSIUM OF TAIWAN-RUSSIA RESEARCH: Institute of Mechanics, LMSU, Moscow, Russia Dates: November 0712, 2012 Sponsors: National Science Council, Taiwan Institute of Mechanics, LMSU, Moscow, Russia 2012 #12; 531/534 22.2 63

Kaplan, Alexander

217

FACULTY ASSOCIATION Indian Institute of Science, Bangalore-560 012  

E-Print Network [OSTI]

FACULTY ASSOCIATION Indian Institute of Science, Bangalore-560 012 (Registered under Karnataka. Secretary : Dr. Phaneendra Yalavarthy Vice President : Prof. G. Mohan Rao Joint Secretary : Dr. Manojit Institute of Science Bangalore ­ 560 012 Dear Sir, Sub: Reminder for information sought by the FA dated June

Srinivasan, N.

218

FACULTY ASSOCIATION Indian Institute of Science, Bangalore-560 012  

E-Print Network [OSTI]

FACULTY ASSOCIATION Indian Institute of Science, Bangalore-560 012 (Registered under Karnataka. Secretary : Dr. Phaneendra Yalavarthy Vice President : Prof. G. Mohan Rao Joint Secretary : Dr. Manojit Institute of Science Bangalore ­ 560 012 Dear Sir, Sub: Latest IISc Scheme, Regulations, and Bye-Laws copy

Srinivasan, N.

219

FACULTY ASSOCIATION Indian Institute of Science, Bangalore-560 012  

E-Print Network [OSTI]

FACULTY ASSOCIATION Indian Institute of Science, Bangalore-560 012 (Registered under Karnataka. Secretary : Dr. Phaneendra Yalavarthy Vice President : Prof. G. Mohan Rao Joint Secretary : Dr. Manojit, Indian Institute of Science Bangalore ­ 560 012 Dear Sir, Sub: Chairperson's term In the recent Annual

Srinivasan, N.

220

FACULTY ASSOCIATION Indian Institute of Science, Bangalore-560 012  

E-Print Network [OSTI]

FACULTY ASSOCIATION Indian Institute of Science, Bangalore-560 012 (Registered under Karnataka. Secretary : Dr. Phaneendra Yalavarthy Vice President : Prof. G. Mohan Rao Joint Secretary : Dr. Manojit, Indian Institute of Science Bangalore ­ 560 012 Dear Sir, Sub: Group Life Insurance for Faculty

Srinivasan, N.

Note: This page contains sample records for the topic "joint genome institute" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


221

Hamilton Eye Institute Neuroscience Institute  

E-Print Network [OSTI]

Care Neonatology & Maternal Fetal Pediatric Heart Institute Steve J. Schwab, MD Musculoskeletal A New of Radiology · Mari Assumes Leadership of OB/GYN city attractioNs Levitt Shell Revived Feature Vision

Cui, Yan

222

Bogoliubov Laboratory of Theoretical Physics JOINT INSTITUTE FOR NUCLEAR RESEARCH  

E-Print Network [OSTI]

role increasing the ``cold fusion'' probability in electronic molecules whose nuclear constituents have. Therefore, widths of such resonances giving a probability of a fusion of the nu­ clear constituents for the molecules LiD and H 2 O. There exists also a well­known exam­ ple [?] of muon catalyzed fusion of deuteron

223

JOIDESJournal Joint Oceanographic Institutions for Deep Earth Sampling  

E-Print Network [OSTI]

TECHNOLOGY NEWS Platforms for Shallow Water Drilling .... 15 Borehole Observatories ..................... 18 to drilling was extremely low heat flow on the incoming plate and higher but still very low heat flow on the upper plate (Langseth and Silver, 1996). These conclusions were based on averaging a large number

224

Russian Academy of Sciences Joint Institute for High Temperatures RAS  

E-Print Network [OSTI]

., Iosilevskiy I. L., Milyavskiy V. V., Mintsev V. B., Petrov O. F., Savintsev A. P., Shpatakovskaya G. V

Fominov, Yakov

225

INL Joint Appointment Agreements The Joint Appointment Program...  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

at Idaho National Laboratory is designed to enhance research collaboration between INL and university staff. Joint appointees develop or conduct research and development at...

226

Metal to ceramic sealed joint  

DOE Patents [OSTI]

A metal to ceramic sealed joint which can withstand wide variations in temperature and maintain a good seal is provided for use in a device adapted to withstand thermal cycling from about 20 to about 1000 degrees C. The sealed joint includes a metal member, a ceramic member having an end portion, and an active metal braze forming a joint to seal the metal member to the ceramic member. The joint is positioned remote from the end portion of the ceramic member to avoid stresses at the ends or edges of the ceramic member. The sealed joint is particularly suited for use to form sealed metal to ceramic joints in a thermoelectric generator such as a sodium heat engine where a solid ceramic electrolyte is joined to metal parts in the system.

Lasecki, John V. (Livonia, MI); Novak, Robert F. (Farmington Hills, MI); McBride, James R. (Ypsilanti, MI)

1991-01-01T23:59:59.000Z

227

Metal to ceramic sealed joint  

DOE Patents [OSTI]

A metal to ceramic sealed joint which can withstand wide variations in temperature and maintain a good seal is provided for use in a device adapted to withstand thermal cycling from about 20 to about 1000 degrees C. The sealed joint includes a metal member, a ceramic member having an end portion, and an active metal braze forming a joint to seal the metal member to the ceramic member. The joint is positioned remote from the end portion of the ceramic member to avoid stresses at the ends or edges of the ceramic member. The sealed joint is particularly suited for use to form sealed metal to ceramic joints in a thermoelectric generator such as a sodium heat engine where a solid ceramic electrolyte is joined to metal parts in the system. 11 figures.

Lasecki, J.V.; Novak, R.F.; McBride, J.R.

1991-08-27T23:59:59.000Z

228

Quantum Institute  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Quantum Institute Quantum Institute Quantum Institute A new research frontier awaits! Our door is open and we thrive on mutually beneficial partnerships, collaborations that drive innovations and new technologies. Contact Leader Malcolm Boshier (505) 665-8892 Email Two of LANL's most successful quantum technology initiatives: quantum cryptography and the race for quantum computer The area of quantum information, science, and technology is rapidly evolving, with important applications in the areas of quantum cryptography, quantum computing, quantum metrology, and advanced quantum-based sensors, some of which are directly relevant to the Laboratory's national security mission. Mission Foster a vigorous intellectual environment at LANL Define and develop strategic thrusts Target and pursue funding opportunities

229

The genomics of adaptation  

Science Journals Connector (OSTI)

...introduction Special feature 1001 70 197 198 The genomics of adaptation Jacek Radwan 1 * Wieslaw...One contribution to a Special Feature Genomics of adaptation. The amount and nature...aspects of the broad field of adaptation genomics. This introductory article sets up a...

2012-01-01T23:59:59.000Z

230

Genomics of human longevity  

Science Journals Connector (OSTI)

...the original work is properly cited. Genomics of human longevity P. E. Slagboom 1...progress. human longevity|longevity genomics|epigenetics and ageing| 1. Introduction...Innovation Oriented Research Programme on Genomics (SenterNovem; IGE01014 and IGE5007...

2011-01-01T23:59:59.000Z

231

USDA and DOE Fund Genomics Projects For Bioenergy Fuels Research |  

Broader source: Energy.gov (indexed) [DOE]

Fund Genomics Projects For Bioenergy Fuels Research Fund Genomics Projects For Bioenergy Fuels Research USDA and DOE Fund Genomics Projects For Bioenergy Fuels Research August 9, 2006 - 8:43am Addthis WASHINGTON, DC - Aug. 9, 2006 - Energy Secretary Samuel Bodman and Agriculture Secretary Mike Johanns today announced that the Department of Agriculture and the Department of Energy (DOE) have jointly awarded nine grants totaling $5.7 million for biobased fuels research that will accelerate the development of alternative fuel resources. Bodman commented, "These research projects build upon DOE's strategic investments in genomics, to accelerate scientific discovery and promote the development of alternative energy sources vital to America's energy and economic security." "To be a reliable renewable energy source, farmers and ranchers will need

232

DOC-DOE Joint China Mission Statement | Department of Energy  

Office of Environmental Management (EM)

Joint China Mission Statement DOC-DOE Joint China Mission Statement DOC-DOE Joint China Mission Statement DOC-DOE Joint China Mission Statement More Documents & Publications...

233

Appropriateness Criteria and Elective Procedures — Total Joint Arthroplasty  

Science Journals Connector (OSTI)

...the importance of such criteria and have already started developing them as guidelines for other orthopedic procedures. Second, accountable care organizations and other institutions pursuing similar health care delivery models are becoming influential, and as they move away from procedure-based payments... The implementation of appropriateness criteria that help to identify the patients likely to benefit most from a given procedure could help to combat increasing health care costs while enhancing access and quality. Total joint arthroplasty offers a prime example.

Ghomrawi H.M.K.Schackman B.R.Mushlin A.I.

2012-12-27T23:59:59.000Z

234

Proceedings of the relevance of mass spectrometry to DNA sequence determination: Research needs for the Human Genome Program  

SciTech Connect (OSTI)

A workshop was sponsored for the US Department of Energy (DOE), Office of Health and Environmental Research by Pacific Northwest Laboratory, April 4--5, 1990, in Seattle, Washington, to examine the potential role of mass spectrometry in the joint DOE/National Institutes of Health (NIH) Human Genome Program. The workshop was occasioned by recent developments in mass spectrometry that are providing new levels for selectivity, sensitivity, and, in particular, new methods of ionization appropriate for large biopolymers such as DNA. During discussions, three general mass spectrometric approaches to the determination of DNA sequence were considered: (1) the mass spectrometric detection of isotopic labels from DNA sequencing mixtures separated using gel electrophoresis, (2) the direct mass spectrometric analysis from direct ionization of unfractionated sequencing mixtures where the measured mass of the constituents functions to identify and order the base sequence (replacing separation by gel electrophoresis), and (3) an approach in which a single highly charged molecular ion of a large DNA segment produced is rapidly sequenced in an ion cyclotron resonance ion trap. The consensus of the workshop was that, on the basis of the new developments, mass spectrometry has the potential to provide the substantial increases in sequencing speed required for the Human Genome Program. 66 refs., 3 tabs.

Edmonds, C.G.; Smith, R.D. (Pacific Northwest Lab., Richland, WA (USA)); Smith, L.M. (Wisconsin Univ., Madison, WI (USA))

1990-11-01T23:59:59.000Z

235

Former Worker Program - Joint Outreach Task Group  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Group Group Former Worker Medical Screening Program (FWP) The Joint Outreach Task Group (JOTG) includes representatives from HSS, Department of Labor (DOL), the National Institute for Occupational Safety and Health (NIOSH), the Offices of the Ombudsman for DOL and NIOSH, and the DOE-funded FWP projects. The JOTG was established in 2009 under the premise that agencies/programs with common goals can work together by combining resources and coordinating outreach efforts. Each involved agency has a different mission, but the missions are complementary. By working together, the agencies are better able to serve the DOE workforce. The JOTG focuses on educating the former workers on the programs and resources available to them. The JOTG has created a monthly calendar of community events to facilitate interagency and community involvement in these events.

236

CLEERS Coordination & Joint Development of Benchmark Kinetics...  

Broader source: Energy.gov (indexed) [DOE]

CLEERS Coordination & Joint Development of Benchmark Kinetics for LNT & SCR CLEERS Coordination & Joint Development of Benchmark Kinetics for LNT & SCR 2012 DOE Hydrogen and Fuel...

237

CLEERS Coordination & Joint Development of Benchmark Kinetics...  

Broader source: Energy.gov (indexed) [DOE]

Joint Development of Benchmark Kinetics for LNT & SCR CLEERS Coordination & Joint Development of Benchmark Kinetics for LNT & SCR 2011 DOE Hydrogen and Fuel Cells Program, and...

238

Superfluid helium testing of a stainless steel to titanium piping transition joint  

SciTech Connect (OSTI)

Stainless steel-to-titanium bimetallic transitions have been fabricated with an explosively bonded joint. This novel joining technique was conducted by the Russian Federal Nuclear Center, working under contract for the Joint Institute for Nuclear Research. These bimetallic transitions are being considered for use in future superconducting radio-frequency cavity cryomodule assemblies. This application requires cryogenic testing to demonstrate that this transition joint remains leak-tight when sealing superfluid helium. To simulate a titanium cavity vessel connection to a stainless steel service pipe, bimetallic transition joints were paired together to fabricate piping assemblies. These piping assemblies were then tested in superfluid helium conditions at Fermi National Accelerator Laboratory test facilities. The transition joint test program will be described. Fabrication experience and test results will be presented.

Soyars, W.; /Fermilab; Basti, A.; Bedeschi, F.; /INFN, Pisa; Budagov, J.; /Dubna, JINR; Foley, M.; Harms, E.; Klebaner, A.; Nagaitsev, S.; /Fermilab; Sabirov, B.; Dubna, JINR

2009-11-01T23:59:59.000Z

239

Genomics and Systems Biology  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Genomics and Systems Biology Genomics and Systems Biology Genomics and Systems Biology Los Alamos scientists perform research in functional genomics and structural genomics, and applications for such work cover diverse fields such as energy, agriculture, and environmental cleanup. Get Expertise Babetta Marrone Biofuels Program Manager Email Cheryl Kuske DOE BER Biological System Science Division Program Manager Email Chris Detter Emerging Threats Program Manager: Email Rebecca McDonald Bioscience Communications Email "We were asked to build a rocket ship," said developer Joel Berendzen, "but instead we built a 10,000 mph motorcycle." - Sequedex team LANL leads the world in computational finishing of microbial genomes Protein research Read caption + In 2013, Los Alamos scientist Richard Sayre and his team genetically

240

Querying genomic databases  

SciTech Connect (OSTI)

A natural-language interface has been developed that retrieves genomic information by using a simple subset of English. The interface spares the biologist from the task of learning database-specific query languages and computer programming. Currently, the interface deals with the E. coli genome. It can, however, be readily extended and shows promise as a means of easy access to other sequenced genomic databases as well.

Baehr, A.; Hagstrom, R.; Joerg, D.; Overbeek, R.

1991-09-01T23:59:59.000Z

Note: This page contains sample records for the topic "joint genome institute" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


241

Phylogenetic Inference Using Whole Genomes  

E-Print Network [OSTI]

Phylogenetic Inference Using Whole Genomes Bruce Rannala1 and Ziheng Yang2 1 Genome Center.yang@ucl.ac.uk Annu. Rev. Genomics Hum. Genet. 2008. 9:217­31 First published online as a Review in Advance on June 3, 2008 The Annual Review of Genomics and Human Genetics is online at genom.annualreviews.org This article

242

USDA and DOE to Coordinate Research of Plant and Microbial Genomics |  

Broader source: Energy.gov (indexed) [DOE]

to Coordinate Research of Plant and Microbial Genomics to Coordinate Research of Plant and Microbial Genomics USDA and DOE to Coordinate Research of Plant and Microbial Genomics January 17, 2006 - 10:39am Addthis -- Soybean DNA to be Decoded -- WASHINGTON - The U.S. Departments of Agriculture and Energy announced Monday they will share resources and coordinate the study of plant and microbial genomics, and the Department of Energy will tackle the sequencing of the soybean genome as the first project resulting from the agreement. "This agreement demonstrates a joint commitment to support high-quality genomics research and integrated projects to meet the nation's agriculture and energy challenges," said Dr. Colien Hefferan, administrator of USDA's Cooperative State Research, Extension and Economics Service (CSREES), who

243

Genome Science/Technologies  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Science & Innovation » Science & Innovation » Science & Engineering Capabilities » Bioscience: Bioenergy, Biosecurity, and Health » Environmental Microbiology » Genome Genome Science/Technologies Los Alamos using cutting-edge sequencing, finishing, and analysis, impact valuable genomic data. Get Expertise Cheryl Kuske DOE BER Biological System Science Division Program Manager Email Srinivas Iyer Bioscience Group Leader Email Momchilo Vuyisich Bioenergy and Biomedical Sciences Email Rebecca McDonald Bioscience Communications Email State-of-the art technology and extensive genomics expertise Protein research Read caption + Los Alamos National Laboratory graduate student, Patricia Langan, changes the properties of a green fluorescent protein in order to create new fluorescent protein variants.

244

Fungal Genomics Program  

SciTech Connect (OSTI)

The JGI Fungal Genomics Program aims to scale up sequencing and analysis of fungal genomes to explore the diversity of fungi important for energy and the environment, and to promote functional studies on a system level. Combining new sequencing technologies and comparative genomics tools, JGI is now leading the world in fungal genome sequencing and analysis. Over 120 sequenced fungal genomes with analytical tools are available via MycoCosm (www.jgi.doe.gov/fungi), a web-portal for fungal biologists. Our model of interacting with user communities, unique among other sequencing centers, helps organize these communities, improves genome annotation and analysis work, and facilitates new larger-scale genomic projects. This resulted in 20 high-profile papers published in 2011 alone and contributing to the Genomics Encyclopedia of Fungi, which targets fungi related to plant health (symbionts, pathogens, and biocontrol agents) and biorefinery processes (cellulose degradation, sugar fermentation, industrial hosts). Our next grand challenges include larger scale exploration of fungal diversity (1000 fungal genomes), developing molecular tools for DOE-relevant model organisms, and analysis of complex systems and metagenomes.

Grigoriev, Igor

2012-03-12T23:59:59.000Z

245

Webinar: Materials Genome Initative  

Broader source: Energy.gov [DOE]

Audio recording and text version of the Fuel Cell Technologies Office webinar titled "Materials Genome Initiative," originally presented on December 2, 2014.

246

Genome-Scale Identification of Membrane-Associated Human mRNAs  

E-Print Network [OSTI]

-Sigler Institute for Integrative Genomics, Princeton University, Princeton, New Jersey, United States of America, 5 of medicine. Plasma membrane proteins and secreted signaling proteins are candidate targets for monoclonal

Botstein, David

247

Philip D. Rack Joint Faculty  

E-Print Network [OSTI]

Philip D. Rack Joint Faculty Dept. of Materials Science and Engineering University of Tennessee invited reviews and 2 book chapters Full publication list available: Philip D. Rack Research Synopsis 1

Pennycook, Steve

248

California Institute of Technology  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

California Institute of Technology o Ivan Celanovic, Principal Research Scientist, Massachusetts Institute of Technology o Geoffrey Kinsey, Director, Photovoltaic...

249

Genomic analysis of mouse tumorigenesis  

E-Print Network [OSTI]

The availability of the human and mouse genome sequences has spurred a growing interest in analyzing mouse models of human cancer using genomic techniques. Comparative genomic studies on mouse and human tumors can be ...

Tam, Mandy Chi-Mun

2006-01-01T23:59:59.000Z

250

Genomics of isolation in hybrids  

Science Journals Connector (OSTI)

...edited by Patrik Nosil and Jeffrey L. Feder Genomics of isolation in hybrids Zachariah Gompert...limitations to the study of the speciation genomics. Further progress in understanding the genomics of speciation will require large-scale...

2012-01-01T23:59:59.000Z

251

Towards the Perfect Genome Sequence (Opening Keynote) ( 7th Annual SFAF Meeting, 2012)  

ScienceCinema (OSTI)

George Weinstock, associate director at the Genome Institute at Washington University, delivered the opening keynote "Towards the Perfect Genome Sequence" at the 2012 Sequencing, Finishing, Analysis in the Future Meeting held June 5-7, 2012 in Santa Fe, New Mexico.

Weinstock, George [Washington University

2013-03-22T23:59:59.000Z

252

Institute of Design Institute of Design  

E-Print Network [OSTI]

Institute of Design Institute of Design 350 N. LaSalle St. Chicago, IL 60610 312.595.4900 design The Institute of Design has continuously explored emerg- ing ideas about how design interacts with society languages and use of new media and material. The school was renamed the Institute of Design (ID) in 1944

Heller, Barbara

253

Solar Energy Research Institute of Singapore | Open Energy Information  

Open Energy Info (EERE)

Institute of Singapore Institute of Singapore Jump to: navigation, search Name Solar Energy Research Institute of Singapore Place Singapore, Singapore Zip 117574 Sector Solar Product The research institute focuses on advanced technologies that specifically address the needs of the solar industry. It is run jointly by the National University of Singapore in partnership with the multi-agency Clean Energy Programme Office. References Solar Energy Research Institute of Singapore[1] LinkedIn Connections CrunchBase Profile No CrunchBase profile. Create one now! This article is a stub. You can help OpenEI by expanding it. Solar Energy Research Institute of Singapore is a company located in Singapore, Singapore . References ↑ "Solar Energy Research Institute of Singapore"

254

Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies  

SciTech Connect (OSTI)

Background-Through the Community Sequencing Program, a catfish EST sequencing project was carried out through a collaboration between the catfish research community and the Department of Energy's Joint Genome Institute. Prior to this project, only a limited EST resource from catfish was available for the purpose of SNP identification. Results-A total of 438,321 quality ESTs were generated from 8 channel catfish (Ictalurus punctatus) and 4 blue catfish (Ictalurus furcatus) libraries, bringing the number of catfish ESTs to nearly 500,000. Assembly of all catfish ESTs resulted in 45,306 contigs and 66,272 singletons. Over 35percent of the unique sequences had significant similarities to known genes, allowing the identification of 14,776 unique genes in catfish. Over 300,000 putative SNPs have been identified, of which approximately 48,000 are high-quality SNPs identified from contigs with at least four sequences and the minor allele presence of at least two sequences in the contig. The EST resource should be valuable for identification of microsatellites, genome annotation, large-scale expression analysis, and comparative genome analysis. Conclusions-This project generated a large EST resource for catfish that captured the majority of the catfish transcriptome. The parallel analysis of ESTs from two closely related Ictalurid catfishes should also provide powerful means for the evaluation of ancient and recent gene duplications, and for the development of high-density microarrays in catfish. The inter- and intra-specific SNPs identified from all catfish EST dataset assembly will greatly benefit the catfish introgression breeding program and whole genome association studies.

Catfish Genome Consortium; Wang, Shaolin; Peatman, Eric; Abernathy, Jason; Waldbieser, Geoff; Lindquist, Erika; Richardson, Paul; Lucas, Susan; Wang, Mei; Li, Ping; Thimmapuram, Jyothi; Liu, Lei; Vullaganti, Deepika; Kucuktas, Huseyin; Murdock, Christopher; Small, Brian C; Wilson, Melanie; Liu, Hong; Jiang, Yanliang; Lee, Yoona; Chen, Fei; Lu, Jianguo; Wang, Wenqi; Xu, Peng; Somridhivej, Benjaporn; Baoprasertkul, Puttharat; Quilang, Jonas; Sha, Zhenxia; Bao, Baolong; Wang, Yaping; Wang, Qun; Takano, Tomokazu; Nandi, Samiran; Liu, Shikai; Wong, Lilian; Kaltenboeck, Ludmilla; Quiniou, Sylvie; Bengten, Eva; Miller, Norman; Trant, John; Rokhsar, Daniel; Liu, Zhanjiang

2010-03-23T23:59:59.000Z

255

Population genomics of wild and laboratory zebrafish (Danio rerio)  

E-Print Network [OSTI]

, Bangladesh, Department of Zoology, Tribhuvan University, Kathmandu, Nepal, §§Wellcome Trust Sanger Institute zebrafish (Danio rerio) populations occurring in Nepal, India, and Bangladesh, and we genetically compared natural populations of tradi- tional laboratory models, for which a wide array of genomic resources

Bernatchez, Louis

256

Fuzzy Genome Sequence Assembly for Single and Environmental Genomes  

E-Print Network [OSTI]

Fuzzy Genome Sequence Assembly for Single and Environmental Genomes Sara Nasser, Adrienne Breland. Traditional methods obtain a microorganism's DNA by culturing it in- dividually. Recent advances in genomics microbial commu- nities are often very complex with tens and hundreds of species. Assembling these genomes

Nicolescu, Monica

257

COMPUTATIONAL GENOMICS: MAPPING, COMPARISON, AND ANNOTATION OF GENOMES  

E-Print Network [OSTI]

address key issues in the different stages of genome research: planning of a genome sequencing project areas: (1) In relation to the early stages of a genome project, we address physical mapping, and we structure and sequence analysis of orthologous human and mouse genomic regions, and develop ROSETTA

Batzoglou, Serafim

258

Update on Genomic Studies of Algae Paths toward Algal Genomics  

E-Print Network [OSTI]

Update on Genomic Studies of Algae Paths toward Algal Genomics Arthur R. Grossman* The Carnegie of genomic information that is being used to help researchers understand the gene content of organisms, how the expression of genes. In this introductory manuscript, I discuss select algae and how genomics is impacting

259

Technique and application for quantifying dynamic shoulder joint kinematics and glenohumeral joint contact patterns  

E-Print Network [OSTI]

The shoulder (glenohumeral) joint has the greatest range of motion of all human joints; as a result, it is particularly vulnerable to dislocation and injury. The ability to accurately measure dynamic in-vivo joint kinematics ...

Massimini, Daniel Frank

2014-01-01T23:59:59.000Z

260

Human Genome Program  

SciTech Connect (OSTI)

The DOE Human Genome program has grown tremendously, as shown by the marked increase in the number of genome-funded projects since the last workshop held in 1991. The abstracts in this book describe the genome research of DOE-funded grantees and contractors and invited guests, and all projects are represented at the workshop by posters. The 3-day meeting includes plenary sessions on ethical, legal, and social issues pertaining to the availability of genetic data; sequencing techniques, informatics support; and chromosome and cDNA mapping and sequencing.

Not Available

1993-01-01T23:59:59.000Z

Note: This page contains sample records for the topic "joint genome institute" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


261

Genomics and Malaria Control  

Science Journals Connector (OSTI)

...-targeted and human-targeted approaches — but in reality, malaria results from three intimately interacting organisms (Figure 1). Fortunately, genomics-based approaches to malaria offer the strategic advantage of considering all three participants through integrative data sets, allowing us to identify... The genomic sequences of the malarial vector, parasite, and host — the three components of the malarial transmission system — have been known for at least two years. It may be possible to counter the disease by harnessing this genomic information to launch a strategic attack on the parasite during vulnerable stages of its life cycle.

Vernick K.D.; Waters A.P.

2004-10-28T23:59:59.000Z

262

Jointly Sponsored Research Program Energy Related Research  

SciTech Connect (OSTI)

Cooperative Agreement, DE-FC26-98FT40323, Jointly Sponsored Research (JSR) Program at Western Research Institute (WRI) began in 1998. Over the course of the Program, a total of seventy-seven tasks were proposed utilizing a total of $23,202,579 in USDOE funds. Against this funding, cosponsors committed $26,557,649 in private funds to produce a program valued at $49,760,228. The goal of the Jointly Sponsored Research Program was to develop or assist in the development of innovative technology solutions that will: (1) Increase the production of United States energy resources - coal, natural gas, oil, and renewable energy resources; (2) Enhance the competitiveness of United States energy technologies in international markets and assist in technology transfer; (3) Reduce the nation's dependence on foreign energy supplies and strengthen both the United States and regional economies; and (4) Minimize environmental impacts of energy production and utilization. Under the JSR Program, energy-related tasks emphasized enhanced oil recovery, heavy oil upgrading and characterization, coal beneficiation and upgrading, coal combustion systems development including oxy-combustion, emissions monitoring and abatement, coal gasification technologies including gas clean-up and conditioning, hydrogen and liquid fuels production, coal-bed methane recovery, and the development of technologies for the utilization of renewable energy resources. Environmental-related activities emphasized cleaning contaminated soils and waters, processing of oily wastes, mitigating acid mine drainage, and demonstrating uses for solid waste from clean coal technologies, and other advanced coal-based systems. Technology enhancement activities included resource characterization studies, development of improved methods, monitors and sensors. In general the goals of the tasks proposed were to enhance competitiveness of U.S. technology, increase production of domestic resources, and reduce environmental impacts associated with energy production and utilization. This report summarizes the accomplishments of the JSR Program.

Western Research Institute

2009-03-31T23:59:59.000Z

263

First metatarsophalangeal joint range of motion : influence of ankle joint position and gastrocsoleus muscle stretching.  

E-Print Network [OSTI]

??[Truncated abstract] First metatarsophalangeal joint (MTPJ1) motion is an important factor in normal weight transference during walking. Disruptions to normal range can influence joints both… (more)

North, Ian Graham

2008-01-01T23:59:59.000Z

264

The Center for integrative genomics  

E-Print Network [OSTI]

The Center for integrative genomics Report 2005­2006 #12;Presentation Director's message 4 Scientific advisory committee 6 Organigram of the CIG 7 research The structure and function of genomes and their evolution alexandrereymond ­ Genome structure and expression 10 henrikKaessmann ­ Evolutionary genomics 12

Kaessmann, Henrik

265

Joint Center for Artificial Photosynthesis  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Single Layer Graphene Electrochemical Platforms" more Nathan Lewis Winter, 2015 2015 Solar-Fuels Winter School California Institute of Technology, Pasadena, California Please...

266

Genome mining for methanobactins  

Science Journals Connector (OSTI)

Methanotrophic bacteria have potential as a biological methane sink, and methanobactins are a set of peptides important in regulating this activity. A genome mining study highlights genes involved in methanobactin production, but also suggests that not all methanotrophs have them.

Grace E Kenney; Amy C Rosenzweig

2013-02-26T23:59:59.000Z

267

Annotating individual human genomes  

Science Journals Connector (OSTI)

Advances in DNA sequencing technologies have made it possible to rapidly, accurately and affordably sequence entire individual human genomes. As impressive as this ability seems, however, it will not likely amount to much if one cannot extract meaningful information from individual sequence data. Annotating variations within individual genomes and providing information about their biological or phenotypic impact will thus be crucially important in moving individual sequencing projects forward, especially in the context of the clinical use of sequence information. In this paper we consider the various ways in which one might annotate individual sequence variations and point out limitations in the available methods for doing so. It is arguable that, in the foreseeable future, DNA sequencing of individual genomes will become routine for clinical, research, forensic, and personal purposes. We therefore also consider directions and areas for further research in annotating genomic variants.

Ali Torkamani; Ashley A. Scott-Van Zeeland; Eric J. Topol; Nicholas J. Schork

2011-01-01T23:59:59.000Z

268

Genomic library construction  

SciTech Connect (OSTI)

Compositions and methods for amplifying nucleic acid sequences from a single cell are provided. Compositions and methods for constructing a genomic library from a single cell are also provided.

Church, George M. (Brookline, MA); Zhang, Kun (San Diego, CA)

2011-07-26T23:59:59.000Z

269

2007 Urban Remote Sensing Joint Event Application of satellite Remote Sensing for Urban  

E-Print Network [OSTI]

2007 Urban Remote Sensing Joint Event Application of satellite Remote Sensing for Urban Risk Analysis: a case study of the 2003 extreme heat wave in Paris Bénédicte Dousset Hawaii Institute@ogs.trieste.it Abstract ­ Satellite observations are used to monitor the August 2003 heat wave in Paris

Paris-Sud XI, Université de

270

2010_Nuclear_Security_Joint_Statement.pdf | Department of Energy  

Energy Savers [EERE]

2010NuclearSecurityJointStatement.pdf 2010NuclearSecurityJointStatement.pdf 2010NuclearSecurityJointStatement.pdf More Documents & Publications United States and France...

271

Joint Fuel Cell Technologies and Advanced Manufacturing Webinar...  

Office of Energy Efficiency and Renewable Energy (EERE) Indexed Site

Joint Fuel Cell Technologies and Advanced Manufacturing Webinar Joint Fuel Cell Technologies and Advanced Manufacturing Webinar Download the presentation slides from the "Joint...

272

Institute of Design Institute of Design  

E-Print Network [OSTI]

Institute of Design Institute of Design 350 N. LaSalle St. Chicago, IL 60610 312.595.4900 main 312.595.4906 graduate study information 312.595.4901 fax design@id.iit.edu www.id.iit.edu Dean: Patrick F. Whitney The Institute of Design (ID) is defined by a legacy of experimentation joined with unique academic programs

Heller, Barbara

273

Joint strength in RCS frames  

E-Print Network [OSTI]

As part of a National Science Foundation (NSF) program ics. on composite and hybrid systems at Texas A&M University, the objective of this thesis is to investigate the joint strength in reinforced column-steel beam (RCS) special moment frames...

Kirby, Cynthia Dawn

1998-01-01T23:59:59.000Z

274

Nucleomorph genomes: structure, function, origin and evolution  

E-Print Network [OSTI]

Nucleomorph genomes: structure, function, origin and evolution John M. Archibald Summary and four genomes--two nuclear genomes, an endosymbiont- derived plastid genome and a mitochondrial genome derived from the host cell. Like mitochondrial and plastid genomes, the genome of the endosymbiont nucleus

Archibald, John

275

Southern Research Institute Visit  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

initiates collaboration between Southern Research Institute(SRI) and LSU CAMD hosted visitors from the Southern Research Institute in Birmingham, Alabama, and researchers from LSU...

276

Modeling joint friction in structural dynamics.  

SciTech Connect (OSTI)

The presence of mechanical joints--typified by the lap joint--in otherwise linear structures has been accommodated in structural dynamics via ad hoc methods for a century. The methods range from tuning linear models to approximate non-linear behavior in restricted load ranges to various methods which introduce joint dissipation in a post-processing stage. Other methods, employing constitutive models for the joints are being developed and their routine use is on the horizon.

Segalman, Daniel Joseph

2005-05-01T23:59:59.000Z

277

Bioinformatics and Genomics Degree Requirements Booklet  

E-Print Network [OSTI]

Bioinformatics and Genomics Degree Requirements Booklet Fall 2010 #12;Contents Course Requirements Bioinformatics and Genomics Curriculum -------------------------------------------------------8 General #12;Bioinformatics and Genomics Option (BG

dePamphilis, Claude

278

MIGRATION DES JOINTS DE GRAINS LA MIGRATION DES JOINTS INTERGRANULAIRES  

E-Print Network [OSTI]

(influence de la force motrice, de la température, de l'orientation, de la présence d'éléments étrangers produise sponta- nément, il faut qu'il existe une force motrice, c'est-à-dire que le déplacement du joint accessibles. Très schématiquement, on pourra poser entre la vitesse de migration v et la force motrice F une

Boyer, Edmond

279

Petroleum Institute Scholarly Publications  

E-Print Network [OSTI]

Abu Dhabi The Petroleum Institute Scholarly Publications January 1st ­ December 31st 2007 #12;The Petroleum Institute Scholarly Publications January 1st ­ December 31st 2007 v #12;- 2 - Scholarly Publications 2007 | The Petroleum Institute #12;- 3 - Scholarly Publications 2007 | The Petroleum Institute

280

Petroleum Institute Scholarly Publications  

E-Print Network [OSTI]

Abu Dhabi The Petroleum Institute Scholarly Publications 2010 #12;#12;The Petroleum Institute Belhaj Petroleum Engineering Sadoon Morad Petroleum Geosciences Sivakumar Sivasubramaniam College of Arts departments within the Petroleum Institute. Names in bold show Petroleum Institute faculty who are attached

Note: This page contains sample records for the topic "joint genome institute" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


281

Genomics and plant cells: application of genomics strategies to Arabidopsis cell biology  

Science Journals Connector (OSTI)

29 June 2002 research-article Genomics and plant cells: application of genomics strategies to Arabidopsis cell biology Michael...the way we conduct plant science. Arabidopsis Genomics Functional Genomics Cell Biology| Genomics and...

2002-01-01T23:59:59.000Z

282

Joint Environmental Management System (EMS) Declaration of Conformance...  

Broader source: Energy.gov (indexed) [DOE]

Services Environmental Management System Joint Environmental Management System (EMS) Declaration of Conformance Joint Environmental Management System (EMS) Declaration of...

283

Institut National des Tlcommunications Advanced Telecommunications Research Institute  

E-Print Network [OSTI]

Institut National des Télécommunications Advanced Telecommunications Research Institute Rapport de

Ray, Thomas S.

284

The engineering institute of Los Alamos National Laboratory  

SciTech Connect (OSTI)

Los Alamos National Laboratory (LANL) and the University of California, San Diego (UCSD) have taken the unprecedented step of creating a collaborative, multi-disciplinary graduate education program and associated research agenda called the Engineering Institute. The mission of the Engineering Institute is to develop a comprehensive approach for conducting LANL mission-driven, multidisciplinary engineering research and to improve recruiting, revitalization, and retention of the current and future staff necessary to support the LANL' s national security responsibilities. The components of the Engineering Institute are (1) a joint LANL/UCSD degree program, (2) joint LANL/UCSD research projects, (3) the Los Alamos Dynamic Summer School, (4) an annual workshop, and (5) industry short courses. This program is a possible model for future industry/government interactions with university partners.

Farrar, Charles R [Los Alamos National Laboratory; Park, Gyuhae [Los Alamos National Laboratory; Cornwell, Phillip J [Los Alamos National Laboratory; Todd, Michael D [UCSD

2008-01-01T23:59:59.000Z

285

Wellcome Trust Sanger Institute HUMAN GENETICS DATA SECURITY POLICY  

E-Print Network [OSTI]

procedures 1. Data category - All projects involving human genetics data must be assigned to one of the four. Level 2: Standard (genomic data with relatively limited demographic/phenotypic information) We expect1 Wellcome Trust Sanger Institute HUMAN GENETICS DATA SECURITY POLICY February 2011 Although almost

Maizels, Rick

286

Joint Center for Artificial Photosynthesis  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

his S.B. (1981), S.M. (1983), and Ph.D. (1987) in Electrical Engineering from the Massachusetts Institute of Technology. He currently serves as Director of the DOE Energy...

287

Joint Center for Artificial Photosynthesis  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Management Team Nathan Lewis Carl Koval Chair of the Management Team Dr. Koval is the Director of JCAP, a Faculty Associate in Chemistry at the California Institute of Technology,...

288

Metal-ceramic joint assembly  

DOE Patents [OSTI]

A metal-ceramic joint assembly in which a brazing alloy is situated between metallic and ceramic members. The metallic member is either an aluminum-containing stainless steel, a high chromium-content ferritic stainless steel or an iron nickel alloy with a corrosion protection coating. The brazing alloy, in turn, is either an Au-based or Ni-based alloy with a brazing temperature in the range of 9500 to 1200.degree. C.

Li, Jian (New Milford, CT)

2002-01-01T23:59:59.000Z

289

JGI - Structural Genomics Program  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Structural Genomics Program Structural Genomics Program The structural characterization of proteins of unknown function can be described as structural genomics, an approach in which structure determination by X-ray crystallography supplies key functional information. This is exemplified by studies of the carboxysome. The structures of the first carboxysome shell proteins (Kerfeld et al., Science 2005) confirmed earlier hypotheses that they are indeed the basic building blocks of the carboxysome shell; the quaternary structure and the higher order assemblies of the proteins in the crystals provided insight into how they assemble into shell facets. Likewise, our structure of the carboxysome component CsoS3 revealed that it was a member of the beta-carbonic family, despite having no detectable sequence homology at the level of primary structure

290

Genomics of cellulolytic bacteria  

Science Journals Connector (OSTI)

The heterogeneous plant biomass is efficiently decomposed by the interplay of a great number of different enzymes. The enzyme systems in cellulolytic bacteria have been investigated by sequencing and bioinformatic analysis of genomes from plant biomass degrading microorganisms with valuable insights into the variety of the involved enzymes. This broadened our understanding of the biochemical mechanisms of plant polymer degradation and made the enzymes applicable for modern biotechnology. A list of the truly cellulolytic bacteria described and the available genomic information was examined for proteins with cellulolytic and hemicellulolytic capability. The importance of the isolation, characterization and genomic sequencing of cellulolytic microorganisms and their usage for sustainable energy production from biomass and other residues, is emphasized.

Daniela E Koeck; Alexander Pechtl; Vladimir V Zverlov; Wolfgang H Schwarz

2014-01-01T23:59:59.000Z

291

Malibu Joint Venture | Open Energy Information  

Open Energy Info (EERE)

Malibu Joint Venture Malibu Joint Venture Jump to: navigation, search Name Malibu Joint Venture Place Germany Sector Solar Product String representation "German utility ... e of next year." is too long. References Malibu Joint Venture[1] LinkedIn Connections CrunchBase Profile No CrunchBase profile. Create one now! This article is a stub. You can help OpenEI by expanding it. Malibu Joint Venture is a company located in Germany . References ↑ "Malibu Joint Venture" Retrieved from "http://en.openei.org/w/index.php?title=Malibu_Joint_Venture&oldid=348612" Categories: Clean Energy Organizations Companies Organizations Stubs What links here Related changes Special pages Printable version Permanent link Browse properties 429 Throttled (bot load) Error 429 Throttled (bot load)

292

The rice genome project in?Japan  

Science Journals Connector (OSTI)

The rice genome project in Japan Takuji Sasaki Rice Genome Research Program, National...Kannondai 2-chome, Tsukuba, Ibaraki 305, Japan Since 1991, the Rice Genome Research Program in Japan has carried out rice genomics, such as large-scale...

Takuji Sasaki

1998-01-01T23:59:59.000Z

293

Mammalian comparative genomics and epigenomics  

E-Print Network [OSTI]

The human genome sequence can be thought of as an instruction manual for our species, written and rewritten over more than a billion of years of evolution. Taking a complete inventory of our genome, dissecting its genes ...

Mikkelsen, Tarjei Sigurd, 1978-

2009-01-01T23:59:59.000Z

294

Genomic Sciences | Clean Energy | ORNL  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

the fundamental principles that control complex biological systems important to clean energy and environmental applications. Multidisciplinary genomic science research and...

295

Challenges in global genomics education  

Science Journals Connector (OSTI)

Abstract In spite of high expectations for the integration of genomics into medicine, it is not clear that health providers are competent to appropriately use new genomic approaches. The issue is further complicated by differences across the globe in terms of educational systems, access to genomic technologies, and priorities in health care. In this commentary we will review some of the major challenges in educating the health provider workforce about genomic medicine.

Ashwini de Abrew; Vajira H.W. Dissanayake; Bruce R. Korf

2014-01-01T23:59:59.000Z

296

Refining Restriction Enzyme Genome Maps  

Science Journals Connector (OSTI)

A genome map is an ordering of a set of clones according to their believed position on a DNA string. Simple heuristics for genome map assembly based on single restriction enzyme with complete digestion data can lead to inaccuracies and ambiguities. This ... Keywords: constraint query languages, genome mapping, set constraints

Peter Z. Revesz

1998-01-01T23:59:59.000Z

297

SHORT REVIEW Butterfly genomics eclosing  

E-Print Network [OSTI]

SHORT REVIEW Butterfly genomics eclosing P Beldade1 , WO McMillan2 and A Papanicolaou3 1 Section to an explosion of genomic data and the emergence of new research avenues. Evolutionary and ecological functional genomics, with its focus on the genes that affect ecological success and adaptation in natural populations

Beldade, Patrícia

298

Genomics in the ecological arena  

Science Journals Connector (OSTI)

...meeting-report Meeting reports 1001 60 69 70 129 Genomics in the ecological arena Luisa Orsini...Dame, IN 46556, USA 4 The Center for Genomics and Bioinformatics, Indiana University...emerging model system in environmental genomics. Daphnia has been a model species in...

2011-01-01T23:59:59.000Z

299

Selection of stirling engine parameter and modes of joint operation with the Topaz II  

SciTech Connect (OSTI)

In addition to a high-temperature thermionic conversion cycle, application of a low-temperature machine cycle, such as the Stirling engine, is being considered. To select the optimum mode for joint operation of the Topaz II system and Stirling engine, output electric parameters are obtained as a function of thermal power released in the TFE fuel cores. The hydraulic diagram used for joint operation of the Topaz II and the Stirling engine is considered. Requirements to hydraulic characteristics of the Stirling engine heat exchanges are formulated. Scope of necessary modifications to mount the Stirling Engine on the Topaz II is estimated. {copyright} {ital 1996 American Institute of Physics.}

Kirillov, E.Y.; Ogloblin, B.G.; Shalaev, A.I. [Central Design Bureau of Machine Building, Krasnogvardeyskaya Square 3, St. Petersburg, (Russia) 195272

1996-03-01T23:59:59.000Z

300

International milk genomics consortium  

E-Print Network [OSTI]

University, Wooster, OH 44691, USA c University of Idaho, Moscow, ID 83844, USA d University of Colorado. The general goals of the Milk Genomics Consortium are to link the scientific community through milk and geno value of milk's components is known (German, Dillard, & Ward, 2002). The scientific challenge, therefore

Rocke, David M.

Note: This page contains sample records for the topic "joint genome institute" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


301

Genomics ace quits Japan  

Science Journals Connector (OSTI)

... end he was preparing to leave for the University of Chicago in Illinois, frustrated by Japan's lack of support for genomics and doubtful that the country would ever take a ... He is one of the country's best-funded researchers and has led some of Japan's biggest science projects. In addition, he is a successful biotechnology entrepreneur, having ...

David Cyranoski

2012-02-01T23:59:59.000Z

302

USDA-DOE Make Available $4 Million for Biomass Genomics Research |  

Broader source: Energy.gov (indexed) [DOE]

USDA-DOE Make Available $4 Million for Biomass Genomics Research USDA-DOE Make Available $4 Million for Biomass Genomics Research USDA-DOE Make Available $4 Million for Biomass Genomics Research October 12, 2006 - 9:08am Addthis ST. LOUIS, MO -- The U.S. Departments of Energy and Agriculture (DOE and USDA) today announced $4 million for bio-based fuels research that will accelerate the development of alternative fuels. The departments issued a solicitation for research proposals for new plant feedstock genomics research projects. Dr. Raymond L. Orbach, DOE Under Secretary for Science, made the announcement at Advancing Renewable Energy: An American Rural Renaissance, a conference jointly hosted by the two agencies in St. Louis. "We are seeking to accelerate research breakthroughs that contribute towards making biofuels a cost-effective alternative to fossil fuels, with

303

JGI - Intro to Genomics 1  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

An Introduction to Genomics: The Human Genome and Beyond An Introduction to Genomics: The Human Genome and Beyond 1 | 2 | 3 | 4 | Next>> What is genomics? THE HUMAN BODY consists of trillions of cells. Almost all contain an entire genome--the complete set of inherited genetic information encoded in our DNA. When humans reproduce, the parents' sperm and egg DNA combine to contribute a genome's worth of genetic information to the fertilized embryo. That same information is in each of the cells that eventually make up an organism. cell, DNA helix, and protein structure Some segments of DNA, called genes or "coding" DNA, contain the chemical recipe that determines particular traits; genetics is the study of the inheritance and function of these genes. Scientists now estimate that humans have about 30,000 genes, located along threadlike, tightly coiled

304

Petroleum Institute Scholarly Publications  

E-Print Network [OSTI]

Abu Dhabi The Petroleum Institute Scholarly Publications 2008 #12.. AAkkgguunn Petroleum Engineering SS.. MMoorraadd Petroleum Geosciences RR.. NNuunnnn &&SS indicate Petroleum Institute faculty who are attached to the program shown. Every effort has been made

305

Entropic uncertainties for joint quantum measurements  

SciTech Connect (OSTI)

We investigate the uncertainty associated with a joint quantum measurement of two spin components of a spin-(1/2) particle and quantify this in terms of entropy. We consider two entropic quantities, the joint entropy and the sum of the marginal entropies, and obtain lower bounds for each of these quantities. For the case of joint measurements where we measure each spin observable equally well, these lower bounds are tight.

Brougham, Thomas [Department of Physics, FJFI, CVUT, Brehova 7, 115 19 Praha 1 (Czech Republic); SUPA, Department of Physics, University of Strathclyde, Glasgow G4 ONG (United Kingdom); Andersson, Erika [SUPA, Department of Physics, School of EPS, Heriot-Watt University, Edinburgh EH14 4As (United Kingdom); Barnett, Stephen M. [SUPA, Department of Physics, University of Strathclyde, Glasgow G4 ONG (United Kingdom)

2009-10-15T23:59:59.000Z

306

Navigating protected genomics data with UCSC Genome Browser in a Box.  

E-Print Network [OSTI]

H. et al. (2013) Integrative Genomics Viewer (IGV):High-performance genomics data visualization andbrowsers for comparative genomics. Bioinformatics. In press.

2014-01-01T23:59:59.000Z

307

CLEERS Coordination & Joint Development of Benchmark Kinetics...  

Office of Energy Efficiency and Renewable Energy (EERE) Indexed Site

Kinetic Data CLEERS Coordination & Joint Development of Benchmark Kinetics for LNT & SCR CLEERS Coordination & Development of Catalyst Process Kinetic Data - Pres. 1:...

308

Washington Joint Aquatic Resources Permit Application | Open...  

Open Energy Info (EERE)

Permit Application Jump to: navigation, search OpenEI Reference LibraryAdd to library Legal Document- Permit ApplicationPermit Application: Washington Joint Aquatic...

309

The Institute of Petroleum  

E-Print Network [OSTI]

The Institute of Petroleum Engineering The Institute of Petroleum Engineering (IPE) is a world leading, specialised centre in research, training and teaching, with the largest petroleum engineering and teaching. Our vision is to be the international institute of choice for research and teaching in petroleum

Painter, Kevin

310

The National Cancer Institute,  

E-Print Network [OSTI]

The National Cancer Institute, International Cancer Information Center Bldg. 82, Rm 123 Bethesda, MD 20892 The National Cancer Institute (NCI) is part of the Federal Government. NCI coordinates the government's cancer research program. It is the largest of the 17 biomedical research institutes and centers

311

institution Service Fin  

E-Print Network [OSTI]

with the up eed to have: eferred institut mary DUNS nu me, title, and em enter the infor ded verificatio st universit earching on th e n institution is r "List of Comp ent, or search for the institut thorized. Not Listed? ted, it may still uctions with th n or entity can HScompliant F o determine if i cies

Hutcheon, James M.

312

Policy for Institutional Consultants  

Science Journals Connector (OSTI)

Policy for Institutional Consultants ... The Association of Consulting Chemists and Chemical Engineers, therefore, offers "A Statement of Research Policy Suggested for Inclusion in Research Policies of Educational Institutions" which is the result of a study of a cross section of institutional policies now in ... ...

1946-06-10T23:59:59.000Z

313

OIL & GAS INSTITUTE Introduction  

E-Print Network [OSTI]

OIL & GAS INSTITUTE CONTENTS Introduction Asset Integrity Underpinning Capabilities 2 4 4 6 8 9 10 COMPETITIVENESS UNIVERSITY of STRATHCLYDE OIL & GAS INSTITUTE OIL & GAS EXPERTISE AND PARTNERSHIPS #12;1 The launch of the Strathclyde Oil & Gas Institute represents an important step forward for the University

Mottram, Nigel

314

INSTITUTE OF BIOMEDICAL ENGINEERING  

E-Print Network [OSTI]

INSTITUTE OF BIOMEDICAL ENGINEERING Innovation,Translation, Impact University College London Gower Street London WC1E 6BT UK www.ibme.ucl.ac.uk DesignbyHype!hype.co.uk UCL Institute of Biomedical Engineering #12;Innovating MedTech The Institute of Biomedical Engineering (IBME) provides a much-needed focus

Saunders, Mark

315

Joint Statement of the U.S.-Iraq Joint Coordinating Committee on Energy |  

Broader source: Energy.gov (indexed) [DOE]

Joint Statement of the U.S.-Iraq Joint Coordinating Committee on Joint Statement of the U.S.-Iraq Joint Coordinating Committee on Energy Joint Statement of the U.S.-Iraq Joint Coordinating Committee on Energy April 23, 2012 - 2:25pm Addthis The governments of the United States of America and the Republic of Iraq reaffirmed their commitment to joint cooperation in the areas of oil production and export, natural gas, electricity, and critical energy infrastructure protection during the inaugural meeting of the Joint Coordinating Committee (JCC) on Energy on April 23, 2012. This meeting, held at the U.S. Department of Energy, was co-chaired by Iraqi Deputy Prime Minister for Energy Dr. Hussain Al Shahristani and U.S. Deputy Secretary of Energy Daniel Poneman and Special Envoy and Coordinator for International Energy Affairs at the U.S. Department of State Ambassador

316

Joint Statement of the U.S.-Iraq Joint Coordinating Committee on Energy |  

Broader source: Energy.gov (indexed) [DOE]

Joint Statement of the U.S.-Iraq Joint Coordinating Committee on Joint Statement of the U.S.-Iraq Joint Coordinating Committee on Energy Joint Statement of the U.S.-Iraq Joint Coordinating Committee on Energy April 23, 2012 - 2:25pm Addthis The governments of the United States of America and the Republic of Iraq reaffirmed their commitment to joint cooperation in the areas of oil production and export, natural gas, electricity, and critical energy infrastructure protection during the inaugural meeting of the Joint Coordinating Committee (JCC) on Energy on April 23, 2012. This meeting, held at the U.S. Department of Energy, was co-chaired by Iraqi Deputy Prime Minister for Energy Dr. Hussain Al Shahristani and U.S. Deputy Secretary of Energy Daniel Poneman and Special Envoy and Coordinator for International Energy Affairs at the U.S. Department of State Ambassador

317

Kinetic role of the metatarsophalangeal joint in normal walking: Joint moment and power  

Science Journals Connector (OSTI)

Joint moment and power of the metatarsophalangeal (MP) joint in ... with synchronous measurements of ground reaction forces and foot pressure distribution was performed with the two-segment foot model. Twenty-two...

Youngho Kim; Seunghyeon Kim; Jongsang Son…

2012-08-01T23:59:59.000Z

318

JOINT ELECTRICAL & COMPUTER ENGINEERING AND  

E-Print Network [OSTI]

, and Polarization of a Collisional Soft X-Ray Laser" by Prof. Karol Janulewicz Gwanju Institute of Science-inversion X-ray lasers work nearly exclusively in the mirrorless arrangement using amplified spontaneous of the X-ray laser output will be discussed and a simple model of the speckle structure origin in the X-ray

319

Fast and sensitive multiple alignment of large genomic sequences  

E-Print Network [OSTI]

in Bioinformatics and Genome Research, Universität Bielefeld, Postfach 100131, 33501 Bielefeld, Germany and 4University of Göttingen, Institute of Microbiology and Genetics, Goldschmidtstr. 1, 37077 Göttingen, Germany Email: Michael Brudno* - brudno... , Blankespoor CM, Wang ZE, Miller W, Rubin EM, Frazer KA: Identification of a coordinate regulator of interleukins 4, 13, and 5 by cross-species sequence comparisons. Science 2000, 288(5463):136-140. 14. Göttgens B, Barton LM, Gilbert JGR, Bench AJ, Sanchez MJ...

Brudno, Michael; Chapman, Michael A; Gottgens, Berthold; Batzoglou, Serafim; Morgenstern, Burkhard

2003-12-23T23:59:59.000Z

320

Genomics Division Home  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

PIs PIs Mark Biggin Jim Bristow Jan-Fang Cheng Inna Dubchak Suzanna Lewis Chris Mungall Len Pennacchio Eddy Rubin Axel Visel Divisional Information Support Staff Seminars Diversity Directory Contact Us The characterization and analysis of genome sequences from such diverse organisms as humans to the most primitive soil microbe represent a watershed opportunity for biology. The Genomics Division is taking advantage of this wealth of new information. While it is well known that DNA encodes the basic blue print of life, it is not known how best to interpret most of this information. To address this question, laboratories within the division are developing computational, biochemical, genetic, and imaging methods to decipher the complex sequence motifs that control RNA transcription, DNA replication, and chromosome structure. The Division is

Note: This page contains sample records for the topic "joint genome institute" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


321

Institutional Change for Sustainability | Department of Energy  

Broader source: Energy.gov (indexed) [DOE]

Institutional Change for Sustainability Institutional Change for Sustainability Institutional Change Continuous Improvement Cycle Institutional Change Continuous Improvement Cycle...

322

LWRS Program and EPRI Long-Term Operations Program - Joint R&D Plan |  

Broader source: Energy.gov (indexed) [DOE]

LWRS Program and EPRI Long-Term Operations Program - Joint R&D Plan LWRS Program and EPRI Long-Term Operations Program - Joint R&D Plan LWRS Program and EPRI Long-Term Operations Program - Joint R&D Plan To address the challenges associated with pursuing commercial nuclear power plant operations beyond 60 years, the U.S. Department of Energy's (DOE) Office of Nuclear Energy (NE) and the Electric Power Research Institute (EPRI) have established separate but complementary research and development programs: DOE-NE's Light Water Reactor Sustainability (LWRS) Program and EPRI's Long-Term Operations (LTO) Program. To ensure that a proper linkage is maintained between the programs, DOE-NE and EPRI executed a Memorandum of Understanding in late 2010 to "establish guiding principles under which research activities (between LWRS and LTO) could be

323

LWRS Program and EPRI Long-Term Operations Program - Joint R&D Plan |  

Broader source: Energy.gov (indexed) [DOE]

LWRS Program and EPRI Long-Term Operations Program - Joint R&D Plan LWRS Program and EPRI Long-Term Operations Program - Joint R&D Plan LWRS Program and EPRI Long-Term Operations Program - Joint R&D Plan To address the challenges associated with pursuing commercial nuclear power plant operations beyond 60 years, the U.S. Department of Energy's (DOE) Office of Nuclear Energy (NE) and the Electric Power Research Institute (EPRI) have established separate but complementary research and development programs: DOE-NE's Light Water Reactor Sustainability (LWRS) Program and EPRI's Long-Term Operations (LTO) Program. To ensure that a proper linkage is maintained between the programs, DOE-NE and EPRI executed a Memorandum of Understanding in late 2010 to "establish guiding principles under which research activities (between LWRS and LTO) could be

324

Complete genome sequence of Kribbella flavida type strain (IFO 14399T)  

SciTech Connect (OSTI)

The genus Kribbella consists of 15 species, with Kribbella flavida (Park et al. 1999) as the type species. The name Kribbella was formed from the acronym of the Korea Research Institute of Bioscience and Biotechnology, KRIBB. Strains of the various Kribbella species were originally isolated from soil, potato, alum slate mine, patinas of catacombs or from horse racecourses. Here we describe the features of K. flavida together with the complete genome sequence and annotation. In addition to the 5.3 Mbp genome of Nocardioides sp. JS614, this is only the second completed genome sequence of the family Nocardioidaceae. The 7,579,488 bp long genome with its 7,086 protein-coding and 60 RNA genes and is part of the Genomic Encyc-lopedia of Bacteria and Archaea project.

Pukall, Rudiger [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany; Lapidus, Alla L. [U.S. Department of Energy, Joint Genome Institute; Glavina Del Rio, Tijana [U.S. Department of Energy, Joint Genome Institute; Copeland, A [U.S. Department of Energy, Joint Genome Institute; Tice, Hope [U.S. Department of Energy, Joint Genome Institute; Cheng, Jan-Fang [U.S. Department of Energy, Joint Genome Institute; Lucas, Susan [U.S. Department of Energy, Joint Genome Institute; Chen, Feng [U.S. Department of Energy, Joint Genome Institute; Nolan, Matt [U.S. Department of Energy, Joint Genome Institute; LaButti, Kurt [U.S. Department of Energy, Joint Genome Institute; Pati, Amrita [U.S. Department of Energy, Joint Genome Institute; Ivanova, N [U.S. Department of Energy, Joint Genome Institute; Mavromatis, K [U.S. Department of Energy, Joint Genome Institute; Mikhailova, Natalia [U.S. Department of Energy, Joint Genome Institute; Pitluck, Sam [U.S. Department of Energy, Joint Genome Institute; Bruce, David [Los Alamos National Laboratory (LANL); Goodwin, Lynne A. [Los Alamos National Laboratory (LANL); Land, Miriam L [ORNL; Hauser, Loren John [ORNL; Chang, Yun-Juan [ORNL; Jeffries, Cynthia [Oak Ridge National Laboratory (ORNL); Chen, Amy [U.S. Department of Energy, Joint Genome Institute; Palaniappan, Krishna [U.S. Department of Energy, Joint Genome Institute; Chain, Patrick S. G. [Lawrence Livermore National Laboratory (LLNL); Rohde, Manfred [HZI - Helmholtz Centre for Infection Research, Braunschweig, Germany; Goker, Markus [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany; Bristow, James [U.S. Department of Energy, Joint Genome Institute; Eisen, Jonathan [U.S. Department of Energy, Joint Genome Institute; Markowitz, Victor [U.S. Department of Energy, Joint Genome Institute; Hugenholtz, Philip [U.S. Department of Energy, Joint Genome Institute; Kyrpides, Nikos C [U.S. Department of Energy, Joint Genome Institute; Klenk, Hans-Peter [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany

2010-01-01T23:59:59.000Z

325

Indo-US Joint Clean Energy Research and Development Center: Budget Form  

Broader source: Energy.gov (indexed) [DOE]

Indo-US Joint Clean Energy Research and Development Indo-US Joint Clean Energy Research and Development Center: Budget Application Form Instructions:  Indian consortia should complete Section I  Each Indian consortia partner should individually fill in Section II  The Budget Summary in Section III should be filled in collectively by the consortia partners and the same information should be reflected in point 7(Section I) of the application form SECTION I 1. Title of the Proposal: 2. Area: 3. Date submitted: 4. Lead Institution and Principal Investigator (name, address, e-mail, phone numbers): (i) India: (ii) US: 5. Consortia partners' contact information: Name of the Partnering Institution Address (Street address, State, Country, Zip

326

The joint probability of rainfall and runoff deficits in the Netherlands Jules J. Beersma and T. Adri Buishand  

E-Print Network [OSTI]

The joint probability of rainfall and runoff deficits in the Netherlands Jules J. Beersma and T. Adri Buishand Royal Netherlands Meteorological Institute (KMNI), PO Box 201, 3730 AE De Bilt, the Netherlands; email: beersma@knmi.nl Abstract The Netherlands are situated at the downstream end of the Rhine

Beersma, Jules

327

Abstract A33: Exploring pediatric cancer genomics with the UCSC Cancer Genomics Browser  

Science Journals Connector (OSTI)

...October 2014 meeting-abstract Pediatric Cancer Genomics and Epigenomics Pediatric Cancer Genomics and Epigenomics: Poster Presentations - Proffered...Abstract A33: Exploring pediatric cancer genomics with the UCSC Cancer Genomics Browser Melissa...

Melissa Cline; Olena Morozova; Teresa Swatloski; Brian Craft; Mary Goldman; David Haussler; Jingchun Zhu

2014-10-15T23:59:59.000Z

328

GIS: a web-based genomics information system for efficiently manipulating and accessing genome physical maps  

E-Print Network [OSTI]

Biological science has entered the genome era. Global genome integrative physical and genetic mapping promises to revolutionize modern genomics research. To facilitate manipulation and applications of the results from genomics research, many...

Chen, Huaming

2012-06-07T23:59:59.000Z

329

POSTDOCTORAL POSITION IN BIOINFORMATICS AND EVOLUTIONARY GENOMICS: Next generation sequencing and analysis of complex polyploid genomes  

E-Print Network [OSTI]

POSTDOCTORAL POSITION IN BIOINFORMATICS AND EVOLUTIONARY GENOMICS: Next generation sequencing and analysis of complex polyploid genomes The research group Genome Evolution and Speciation (Team) to work on the analysis of genome and transcriptome sequence data (generated using 454 Roche

Rennes, Université de

330

GenomeCons: a web server for manipulating multiple genome sequence alignments and their consensus sequences  

Science Journals Connector (OSTI)

......December 2014 brief-report Applications Note GenomeCons: a web server for manipulating multiple genome sequence alignments and...molecular biological processes. In this study, we developed a web server, GenomeCons, for manipulating multiple genome sequence......

Tetsuya Sato; Mikita Suyama

2014-12-01T23:59:59.000Z

331

Institute for Molecular Engineering doubles size of founding faculty with  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

News News Press Releases Feature Stories In the News Experts Guide Media Contacts Social Media Photos Videos Fact Sheets, Brochures and Reports Summer Science Writing Internship Giulia Galli is another joint appointment to Argonne and the University of Chicago's Institute for Molecular Engineering. Galli creates computational methods to design new materials for more efficient energy generation and to simulate the behavior of water. Click to enlarge. Giulia Galli is another joint appointment to Argonne and the University of Chicago's Institute for Molecular Engineering. Galli creates computational methods to design new materials for more efficient energy generation and to simulate the behavior of water. Click to enlarge. Cleland specializes in quantum computing, quantum communication and quantum sensors, all of which depend upon harnessing the peculiar properties of quantum mechanics, the physics that dominates the atomic world and has recently been shown to apply to macroscopic mechanical objects as well as electrical circuits. Pictured above is a quantum machine. Click to enlarge.

332

Original article Neisseria Base: a comparative genomics  

E-Print Network [OSTI]

Original article Neisseria Base: a comparative genomics database for Neisseria meningitidis Lee S, septicemia and in some cases pneumonia. Genomic studies hold great promise for N. meningitidis research genomics database and genome browser that houses and displays publicly available N. meningitidis genomes

Jordan, King

333

A Novel Approach for Comparative Genomics  

E-Print Network [OSTI]

A Novel Approach for Comparative Genomics & Annotation Transfer Alban MANCHERON Raluca URICARU Eric is genome comparison good for?" Genome comparison is crucial for genome annotation, regulatory motifs identification, and vaccine design aims at finding genomic regions either specific to or in one

Paris-Sud XI, Université de

334

Single Cell Whole Genome Amplification  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Single Cell Whole Genome Amplification Single Cell Whole Genome Amplification of Uncultivated Organisms Mircea Podar , Martin Keller , and Philip Hugenholtz (* ü ) Abstract Whole genome amplification of single cells is emerging as a powerful technique for accessing the genomes of individual members of microbial communi- ties without the complication of identifying the source of sequence data posed by shotgun sequencing of environmental samples (metagenomics). This method holds particular promise for the molecular unveiling of uncultivated organisms that com- prise the bulk of the microbial diversity and functionality on our planet. 1 Introduction Over the last two decades, it has become increasingly apparent that microbial diversity

335

Genomics: Encyclopaedia of humble DNA  

Science Journals Connector (OSTI)

... ENCODE Project Consortium shows through the analysis of 1% of the human genome that the humble, unpretentious non-gene sequences have essential regulatory roles (Fig. 1). ...

John M. Greally

2007-06-13T23:59:59.000Z

336

Evolutionary Genomics of Prokaryotic Viruses.  

E-Print Network [OSTI]

??Evolutionary history of biological entities is recorded within their nucleic acid sequences and can (sometimes) be deciphered by thorough genomic analysis. In this study we… (more)

Krupovic, Mart

2010-01-01T23:59:59.000Z

337

Computational genomics on the grid.  

E-Print Network [OSTI]

??The post-genomic era is characterized by large amount of data available from sequencing projects. The large size of biological datasets, inherent complexity of biological problems… (more)

Chen, Chunxi.

2008-01-01T23:59:59.000Z

338

U.S.-Japan Joint Statement | Department of Energy  

Broader source: Energy.gov (indexed) [DOE]

U.S.-Japan Joint Statement U.S.-Japan Joint Statement U.S.-Japan Joint Statement prepared as part of the International Partnership for a Hydrogen Economy usjapanstatementrelease...

339

United States-Japan Joint Nuclear Energy Action Plan | Department...  

Broader source: Energy.gov (indexed) [DOE]

United States-Japan Joint Nuclear Energy Action Plan United States-Japan Joint Nuclear Energy Action Plan An outline on the United States and Japan's joint nuclear energy action...

340

GenomeView: a next-generation genome browser Thomas Abeel1,2,3,  

E-Print Network [OSTI]

GenomeView: a next-generation genome browser Thomas Abeel1,2,3, *, Thomas Van Parys1,2 , Yvan Saeys GenomeView, a stand-alone genome browser specifically designed to visualize and manipulate a multitude of genomics data. GenomeView enables users to dynamically browse high volumes of aligned short-read data

Gent, Universiteit

Note: This page contains sample records for the topic "joint genome institute" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


341

The human genome project  

SciTech Connect (OSTI)

The Human Genome Project will obtain high-resolution genetic and physical maps of each human chromosome and, somewhat later, of the complete nucleotide sequence of the deoxyribonucleic acid (DNA) in a human cell. The talk will begin with an extended introduction to explain the Project to nonbiologists and to show that map construction and sequence determination require extensive computation in order to determine the correct order of the mapped entities and to provide estimates of uncertainty. Computational analysis of the sequence data will become an increasingly important part of the project, and some computational challenges are described. 5 refs.

Bell, G.I.

1991-06-01T23:59:59.000Z

342

Correlation of Genomic and Physiological Traits of Thermoanaerobacter Species with Biofuel Yields  

Science Journals Connector (OSTI)

...supported by the Oklahoma Bioenergy Center (J.Z.), the U.S. Department of Energy Joint BioEnergy Institute (JBEI) (J.Z...and long-term. Biomass Bioenergy 28 :384-410. 14. He...G. Liden. 2008. A short review on SSF-an interesting process...

Christopher L. Hemme; Matthew W. Fields; Qiang He; Ye Deng; Lu Lin; Qichao Tu; Housna Mouttaki; Aifen Zhou; Xueyang Feng; Zheng Zuo; Bradley D. Ramsay; Zhili He; Liyou Wu; Joy Van Nostrand; Jian Xu; Yinjie J. Tang; Juergen Wiegel; Tommy J. Phelps; Jizhong Zhou

2011-09-23T23:59:59.000Z

343

Correlation of Genomic and Physiological Traits of Thermoanaerobacter Species with Biofuel Yields  

Science Journals Connector (OSTI)

...supported by the Oklahoma Bioenergy Center (J.Z...Department of Energy Joint BioEnergy Institute (JBEI...long-term. Biomass Bioenergy 28 :384-410. 14...Liden. 2008. A short review on SSF-an interesting...from deep subsurface environments of the Piceance Basin...

Christopher L. Hemme; Matthew W. Fields; Qiang He; Ye Deng; Lu Lin; Qichao Tu; Housna Mouttaki; Aifen Zhou; Xueyang Feng; Zheng Zuo; Bradley D. Ramsay; Zhili He; Liyou Wu; Joy Van Nostrand; Jian Xu; Yinjie J. Tang; Juergen Wiegel; Tommy J. Phelps; Jizhong Zhou

2011-09-23T23:59:59.000Z

344

INSTITUTE COLLOQUIA AND SEMINARS  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

National Laboratory, Berkeley, California Production of Transactinide Elements in Cold Fusion Reactions at LBNL February 20 Mr. Thomas Henry, Cyclotron Institute, Texas A&M...

345

Graduate Studies - Cyclotron Institute  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

the Department of Chemistry, but may elect to work with any Institute faculty research advisor, irrespective of that advisor's departmental affiliation. Research programs at the...

346

Michigan Institute Science and  

E-Print Network [OSTI]

Michigan Institute for Plasma Science and Engineering Seminar Onset of Fast Magnetic Reconnection's magnetosphere, and solar flares. These observations place strong constraints on theory, which must explain

Shyy, Wei

347

Michigan Institute Plasma Science  

E-Print Network [OSTI]

Michigan Institute Plasma Science and Engineering Seminar Neutral Atom Imaging of the Terrestrial re- search includes ion heating in the solar corona, electric double layers, magne- tosphere neutral

Shyy, Wei

348

INSTITUTE OF COMPUTER SCIENCE  

E-Print Network [OSTI]

Institute of Computer Science, Academy of Sciences of the Czech Republic. Pod vodÆrenskou v 2, 182 07 Prague 8, Czech Republic. phone: (+420)266052083 ...

349

The Norwegian Polar Institute  

Science Journals Connector (OSTI)

... ON March 1, the Norwegian Polar Institute (Norsk Polarinstitutt) was established in Oslo in order to continue and expand the activity of ...

1948-06-19T23:59:59.000Z

350

Commitment Institutional Change Principle  

Broader source: Energy.gov [DOE]

Commitment can be a crucial element that helps Federal agencies inject and emphasize sustainability in their organizational culture. Institutions and people change when they have made definite...

351

Research - Cyclotron Institute  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Overview Viewing gamma ray spectra. The Institute research program focuses on the atomic nucleus, a many-body system of strongly interacting constituents bound together by the...

352

Massachusetts Institute of Technology  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

132011 Teppei Katori, MIT 1 Teppei Katori for MiniBooNE collaboration Massachusetts Institute of Technology Short baseline neutrino workshop, Fermilab, Batavia, IL, May 13, 2011...

353

Small Modular Fast Reactor Design Description Joint Effort  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

July 1, 2005 ANL-SMFR-1 July 1, 2005 ANL-SMFR-1 Small Modular Fast Reactor Design Description Joint Effort by Argonne National Laboratory (ANL) Commissariat a l'Energie Atomique (CEA) and Japan Nuclear Cycle Development Institute (JNC) Project Leaders Y. I. Chang and C. Grandy, ANL P. Lo Pinto, CEA M. Konomura, JNC Technical Contributors ANL: J. Cahalan, F. Dunn, M. Farmer, S. Kamal, L. Krajtl, A. Moisseytsev, Y. Momozaki, J. Sienicki, Y. Park, Y. Tang, C. Reed, C. Tzanos, S. Wiedmeyer, and W. Yang CEA: P. Allegre, J. Astegiano, F. Baque, L. Cachon, M. S. Chenaud, J-L Courouau, Ph. Dufour, J. C. Klein, C. Latge, C. Thevenot, and F. Varaine JNC: M. Ando, Y. Chikazawa, M. Nagamura, Y. Okano, Y. Sakamoto,

354

Joint InSynC-INCREASE Workshop 2010  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Home Agenda Organizing Committee Workshop Contacts Home Agenda Organizing Committee Workshop Contacts Joint InSynC-INCREASE Workshop July 14-16, 2010 About INCREASE The Interdisciplinary Consortium for Research and Educational Access in Science and Engineering (INCREASE) is an organization to promote research in Historically Black Colleges and Universities (HBCUs) and other minority-serving institutions (MSIs), involving utilization of national user facilities - in particular, the National Synchrotron Light Source (NSLS) at Brookhaven National Laboratory - as well as to facilitate education and research training, especially for members of minority groups: African-Americans, Hispanics, and women. About InSynC The InSynC program enables high school teachers and students to gain remote access to experimenting with synchrotron beamtime through a competitive,

355

Joint design and technology transfer for CANDU projects in Korea  

SciTech Connect (OSTI)

Since the first commercial operation of Kori Unit 1 in April 1978, nine nuclear units are operating and seven, including three CANDU 6 reactors (Wolsong 2, 3 & 4), are currently under construction in Korea. One of the cornerstones of Korea`s nuclear energy policy is the drive for technological self-reliance. Thus, as part of the Wolsong Project scope, a Technology Transfer Agreement for CANDU NSSS System Design was concluded. Under tills agreement Atomic Energy of Canada Limited (AECL) is transferring technologies relating to CANDU 6 NSSS design to Korea Atomic Energy Research Institute (KAERI). As a result KAERI is now performing joint design with AECL for the NSSS of the Wolsong Projects. The current NSSS engineering and design progress for Wolsong 2, 3 & 4 is 58 percent as of December 1993. AECL and KAERI will also pursue the development of advanced technology including a large CANDU system on the basis of CANDU 6 technology.

Harris, D.; Lee, I.H.

1994-12-31T23:59:59.000Z

356

US - Brazil Binational Energy Working Group Joint Action Plan...  

Broader source: Energy.gov (indexed) [DOE]

US - Brazil Binational Energy Working Group Joint Action Plan US - Brazil Binational Energy Working Group Joint Action Plan brazilactionplan7202010.pdf More Documents &...

357

Joint Maintenance Status Report of Potomac Electric Power Company...  

Broader source: Energy.gov (indexed) [DOE]

Joint Maintenance Status Report of Potomac Electric Power Company amd PJM Interconnection, LLC Joint Maintenance Status Report of Potomac Electric Power Company amd PJM...

358

National Report Joint Convention on the Safety of Spent Fuel...  

Office of Environmental Management (EM)

National Report Joint Convention on the Safety of Spent Fuel Management and on the Safety of Radioactive Waste Management National Report Joint Convention on the Safety of Spent...

359

Fifth National Report for the Joint Convention on the Safety...  

Energy Savers [EERE]

Fifth National Report for the Joint Convention on the Safety of Spent Fuel Management and the Safety of Radioactive Waste Management Fifth National Report for the Joint Convention...

360

Joint inversion of electrical and seismic data for Fracture char...  

Broader source: Energy.gov (indexed) [DOE]

Joint inversion of electrical and seismic data for Fracture char. and Imaging of Fluid Flow in Geothermal Systems Joint inversion of electrical and seismic data for Fracture char....

Note: This page contains sample records for the topic "joint genome institute" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


361

United States and Japan Sign Joint Nuclear Energy Action Plan...  

Office of Energy Efficiency and Renewable Energy (EERE) Indexed Site

Japan Sign Joint Nuclear Energy Action Plan to Promote Nuclear Energy Cooperation United States and Japan Sign Joint Nuclear Energy Action Plan to Promote Nuclear Energy...

362

United States -Japan Joint Nuclear Energy Action Plan | Department...  

Energy Savers [EERE]

United States -Japan Joint Nuclear Energy Action Plan United States -Japan Joint Nuclear Energy Action Plan President Bush of the United States and Prime Minister Koizumi of Japan...

363

United States and France Sign Joint Statement on Civil Liability...  

Office of Energy Efficiency and Renewable Energy (EERE) Indexed Site

the Joint Statement by U.S. Secretary of Energy, Ernest Moniz, and French Minister of Ecology, Sustainable Development, and Energy, Philippe Martin. "The signing of this joint...

364

International Power Girasolar joint company | Open Energy Information  

Open Energy Info (EERE)

joint company Sector: Solar Product: Joint venture announced between US IPWG and Netherlands-headquartered Girasolar, to develop utility-scale solar projects. References:...

365

Genome Majority Vote (GMV), Version 0.x  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Genome Majority Vote (GMV), Version 0.x Genome Majority Vote (GMV), Version 0.x The pipeline runs PRODIGAL gene predictions on all genomes, runs pan-reciprocal BLAST, and...

366

The function of genomes in bioenergetic organelles  

Science Journals Connector (OSTI)

...1998 The organelle genome database project (GOBASE). Nucleic...The mito- chondrial genome of Arabidopsis is composed...native and immigrant information. Trends Plant Sci...Microbial genes in the human genome: lateral transfer...

2003-01-01T23:59:59.000Z

367

Trichoderma: the genomics of opportunistic success  

E-Print Network [OSTI]

of a fungal prey. BMC Genomics 10, 567 (2009). This studythe TrichoEST functional genomics approach. Curr. Genet. 51,in Hypocrea jecorina. BMC Genomics. 9, 430 (2008) Mukherjee,

Druzhinina, Irina S.

2011-01-01T23:59:59.000Z

368

Cancer genomics and the TCGA project  

Science Journals Connector (OSTI)

...Research September 15, 2011 meeting-abstract Cancer Genomics Cancer Genomics: Poster Presentations - Proffered Abstracts Abstracts...San Francisco, CA Abstract A39: The UCSC Cancer Genomics Browser Brian Craft 1 Kyle Ellrott 1 Mary Goldman...

David Haussler

2010-10-01T23:59:59.000Z

369

From Integrative Genomics to Therapeutic Targets  

Science Journals Connector (OSTI)

...Research. 15 June 2013 review-article Reviews From Integrative Genomics to Therapeutic Targets Rachael Natrajan Paul Wilkerson Corresponding...conventional pathology with genomic profiling and functional genomics have begun to enhance our understanding of the genetic basis...

Rachael Natrajan and Paul Wilkerson

2013-06-15T23:59:59.000Z

370

INSPECTION OF FUSION JOINTS IN PLASTIC PIPE  

SciTech Connect (OSTI)

The standard method of joining plastic pipe in the field is the butt fusion process. As in any pipeline application, joint quality greatly affects overall operational safety of the system. Currently no simple, reliable, cost effective method of assessing the quality of fusion joints in the field exists. Visual examination and pressure testing are current non-destructive approaches, which do not provide any assurance about the long-term pipeline performance. This project will develop, demonstrate, and validate an in-situ non-destructive inspection method for butt fusion joints in gas distribution plastic pipelines. The inspection system will include a laser based image-recognition system that will automatically generate and interpret digital images of pipe joints and assign them a pass/fail rating, which eliminates operator bias in evaluating joint quality. A Weld Zone Inspection Method (WZIM) is being developed in which local heat is applied to the joint region to relax the residual stresses formed by the original joining operation and reveal the surface condition of the joint. In cases where the joint is not formed under optimal conditions, and the intermolecular forces between contacting surfaces are not strong enough, the relaxation of macromolecules in the surface layer causes the material to pull back, revealing a fusion line. If the joint is sound, the bond line image does not develop. To establish initial feasibility of the approach, welds were performed under standard and non-standard conditions. These welds were subjected to the WZIM and tensile testing. There appears to be a direct correlation between the WZIM and tensile testing results. Although WZIM appears to be more sensitive than tensile testing can verify, the approach appears valid.

Alex Savitski; Connie Reichert; John Coffey

2004-07-13T23:59:59.000Z

371

VIRAL EVOLUTION Genomic surveillance elucidates  

E-Print Network [OSTI]

VIRAL EVOLUTION Genomic surveillance elucidates Ebola virus origin and transmission during the 2014,12,13 � Robert F. Garry,8 � S. Humarr Khan,3 � Pardis C. Sabeti1,2 � In its largest outbreak, Ebola virus disease is spreading through Guinea, Liberia, Sierra Leone, and Nigeria. We sequenced 99 Ebola virus genomes from 78

Napp, Nils

372

Joint Electrical Utilities (Iowa) | Department of Energy  

Broader source: Energy.gov (indexed) [DOE]

Joint Electrical Utilities (Iowa) Joint Electrical Utilities (Iowa) Joint Electrical Utilities (Iowa) < Back Eligibility Investor-Owned Utility Local Government Municipal/Public Utility Rural Electric Cooperative Tribal Government Utility Savings Category Alternative Fuel Vehicles Hydrogen & Fuel Cells Buying & Making Electricity Water Home Weatherization Solar Wind Program Info State Iowa Program Type Environmental Regulations Provider Iowa Utilities Board Cities may establish utilities to acquire existing electric generating facilities or distribution systems. Acquisition, in this statute, is defined as city involvement, and includes purchase, lease, construction, reconstruction, extension, remodeling, improvement, repair, and equipping of the facility. This chapter does not limit the powers or authority of

373

Genome in a Bottle Consortium Work Plan  

E-Print Network [OSTI]

lines for whole genome RMs and design synthetic DNA constructs that could will be a set of well-characterized whole genome and synthetic DNA RMs along

374

C3Bio.org - Tags: Genomics  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

.jpeg, .jpe, .bmp, .tif, .tiff, .png, .gif) Submit You are here: Home Tags Genomics All Categories Tags: Genomics More tags Categories All Categories 2 Resources 2...

375

Human Genome Research: Decoding DNA  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Human Genome Research: Decoding DNA Human Genome Research: Decoding DNA Resources with Additional Information Charles DeLisi As head of DOE's Office of Health and Environmental Research, Charles DeLisi played a pivotal role in proposing and initiating the Human Genome Program in 1986. The U.S. Department of Energy (DOE) has historically been active in supporting human genome research. On September 10, 2003, Secretary of Energy Spencer Abraham presented the Secretary's Gold Award to Aristides Patrinos and Francis Collins for their leadership of the government's Human Genome Project. At DOE's Office of Science, Dr. Patrinos is the Associate Director for Biological and Environmental Research. He has been a researcher at the department's Oak Ridge National Laboratory and Brookhaven National Laboratory.

376

COUNTRY INSTITUTION SIGNING DATE  

E-Print Network [OSTI]

COUNTRY INSTITUTION SIGNING DATE /RENEWAL WEB SITE ALBANIA University of Tirana 11.12.2001 www /RENEWAL WEB SITE FINLAND JAMK University of Applied Sciences 29.10.2009 www.jamk.fi/ FRANCE Ã?cole INSTITUTION SIGNING DATE /RENEWAL WEB SITE MACEDONIA St. Cyril and Methodius" University of Skopje 11

Di Pillo, Gianni

377

Nuclear Energy Institutes  

Science Journals Connector (OSTI)

Nuclear Energy Institutes ... The Atomic Energy Commission and the American Society for Engineering Education offer their nuclear energy courses for engineering and science teachers again in the summer of 1960. ... At least 160 college and university teachers will study nuclear science in the seven institutes scheduled. ...

1960-01-11T23:59:59.000Z

378

National Institutes of Health National Institute of Mental Health  

E-Print Network [OSTI]

National Institutes of Health National Institute of Mental Health Department of Health and HumanNational Institute of Mental Health Division of Intramural Research Programs http://intramural.nimh.nih.gov/ [NIMH of Fellowship Training] National Institutes of Health National Institute of Mental Health Department of Health

Baker, Chris I.

379

Nome Joint Utility Systems | Open Energy Information  

Open Energy Info (EERE)

Joint Utility Systems Joint Utility Systems Jump to: navigation, search Name Nome Joint Utility Systems Place Alaska Utility Id 13642 Utility Location Yes Ownership M NERC Location AK Operates Generating Plant Yes Activity Generation Yes Activity Transmission Yes References EIA Form EIA-861 Final Data File for 2010 - File1_a[1] LinkedIn Connections CrunchBase Profile No CrunchBase profile. Create one now! This article is a stub. You can help OpenEI by expanding it. Utility Rate Schedules Grid-background.png Electrical Charge Residential Power Cost Equalization Average Rates Residential: $0.3600/kWh Commercial: $0.3310/kWh References ↑ "EIA Form EIA-861 Final Data File for 2010 - File1_a" Retrieved from "http://en.openei.org/w/index.php?title=Nome_Joint_Utility_Systems&oldid=411195

380

Static strength assessment of cracked tubular joints  

SciTech Connect (OSTI)

Results from a number of investigations on the ultimate capacity of cracked tubular joints are available. A comparison of the results with predictions from parametric equations for the static strength capacity of intact joints indicates that the presence of a defect can have a significant influence on the joint capacity. The data, which were obtained from experiments on small-scale and large-scale tests and numerical analyses, are assessed in this paper. A range of tubular joint geometries containing surface and through-thickness cracks are considered. The data are assessed with respect to characteristic static strength predictions and fracture mechanics predictions based on the use of the Failure Assessment Diagram approach. Finally, an outline of current research in this area is presented.

Stacey, A.; Sharp, J.V. [Health and Safety Executive, London (United Kingdom). Offshore Safety Div.; Nichols, N.W. [AEA Technology, Culham (United Kingdom)

1996-12-01T23:59:59.000Z

Note: This page contains sample records for the topic "joint genome institute" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


381

Sandia National Laboratories: Joint Hire Increases Materials...  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Science Collaboration for Sandia, UNM Sandia Funded to Model Power Pods for Utility-Scale Wave-Energy Converter Mapping Water Availability in the Western US Joint Hire Increases...

382

Joint Actinide Shock Physics Experimental Research - JASPER  

ScienceCinema (OSTI)

Commonly known as JASPER the Joint Actinide Shock Physics Experimental Research facility is a two stage light gas gun used to study the behavior of plutonium and other materials under high pressures, temperatures, and strain rates.

None

2015-01-09T23:59:59.000Z

383

Joint Actinide Shock Physics Experimental Research - JASPER  

SciTech Connect (OSTI)

Commonly known as JASPER the Joint Actinide Shock Physics Experimental Research facility is a two stage light gas gun used to study the behavior of plutonium and other materials under high pressures, temperatures, and strain rates.

None

2014-10-31T23:59:59.000Z

384

Climate Leaders Joint Venture | Open Energy Information  

Open Energy Info (EERE)

Leaders Joint Venture Leaders Joint Venture Jump to: navigation, search Name Climate Leaders' Joint Venture Place Dallas, Texas Product Tudor Investment and Camco International have partnered to create Climate Leaders' Joint Venture. They will have inital working capital of USD 10m, with Camco owning 60%. Coordinates 32.778155°, -96.795404° Loading map... {"minzoom":false,"mappingservice":"googlemaps3","type":"ROADMAP","zoom":14,"types":["ROADMAP","SATELLITE","HYBRID","TERRAIN"],"geoservice":"google","maxzoom":false,"width":"600px","height":"350px","centre":false,"title":"","label":"","icon":"","visitedicon":"","lines":[],"polygons":[],"circles":[],"rectangles":[],"copycoords":false,"static":false,"wmsoverlay":"","layers":[],"controls":["pan","zoom","type","scale","streetview"],"zoomstyle":"DEFAULT","typestyle":"DEFAULT","autoinfowindows":false,"kml":[],"gkml":[],"fusiontables":[],"resizable":false,"tilt":0,"kmlrezoom":false,"poi":true,"imageoverlays":[],"markercluster":false,"searchmarkers":"","locations":[{"text":"","title":"","link":null,"lat":32.778155,"lon":-96.795404,"alt":0,"address":"","icon":"","group":"","inlineLabel":"","visitedicon":""}]}

385

Osteoarthritis Year in Review 2014: genetics and genomics  

Science Journals Connector (OSTI)

Summary Recent developments in genetics/genomics of osteoarthritis (OA) are discussed to improve our understanding of OA pathophysiology. The discovery of a novel variant near the NCOA3 (nuclear receptor coactivator 3) gene associated with hip OA and the regulation of GDF5 gene by four transcription factors via the OA susceptibility locus rs143383 are among important findings in OA genetics. Several microarray-based gene expression studies were published for different tissues of the joint. In OA synovium elevation of collagens and cross-linking enzymes (COL1A1, COL5A1, PLOD2, LOX and TIMP1) responsive to TGF-? was found as well as differential expression pattern between different areas of the osteoarthritic synovial membrane. In OA peripheral blood the role of apoptotic genes was highlighted, while whole genome expression profiling in OA subchondral bone and cartilage revealed common genes in cartilage and bone to be involved in OA development. In epigenetics, several microRNAs (miRNAs) were found to regulate genes’ expression in chondrocytes, among which miR-125, miR-127b miR-21, miR-148a and their use as potential drug targets was highlighted. Future studies must focus on the integration of genetics, genomics and epigenetics for the identification of signaling pathways and regulatory networks responsible for OA development.

A. Tsezou

2014-01-01T23:59:59.000Z

386

Draft Genome Sequence  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Draft Draft Genome Sequence of Serratia sp. Strain ATCC 39006, a Model Bacterium for Analysis of the Biosynthesis and Regulation of Prodigiosin, a Carbapenem, and Gas Vesicles Peter C. Fineran, a Marina C. Iglesias Cans, a Joshua P. Ramsay, b Nabil M. Wilf, b Desiree Cossyleon, a Matthew B. McNeil, a Neil R. Williamson, b Rita E. Monson, b S. Anette Becher, c Jo-Ann L. Stanton, d Kim Brügger, e Steven D. Brown, f George P. C. Salmond b Department of Microbiology and Immunology, University of Otago, Dunedin, New Zealand a ; Department of Biochemistry, University of Cambridge, Cambridge, United Kingdom b ; AgResearch Ltd., Invermay Agricultural Centre, Mosgiel, New Zealand c ; Department of Anatomy, University of Otago, Dunedin, New Zealand d ; EASIH, University of Cambridge, Addenbrooke's Hospital, Cambridge, United Kingdom e ; Biosciences Division, Oak Ridge National Laboratory, Oak Ridge,

387

CHARACTERIZATION OF DAMPING IN BOLTED LAP JOINTS  

SciTech Connect (OSTI)

The dynamic response of a jointed beam was measured in laboratory experiments. The data were analyzed and the system was mathematically modeled to establish plausible representations of joint damping behavior. Damping is examined in an approximate, local linear framework using log decrement and half power bandwidth approaches. in addition, damping is modeled in a nonlinear framework using a hybrid surface irregularities model that employs a bristles-construct. Experimental and analytical results are presented.

C. MALONEY; D. PEAIRS; ET AL

2000-08-01T23:59:59.000Z

388

Feature selection for automatic solder joint inspection  

E-Print Network [OSTI]

FEATURE SELECTION FOR AUTOMATIC SOLDER JOINT INSPECTION A Thesis CHENG-CHENG LEE Submitted to the Graduate College of Texas AiVM University in partial fulfillment of the requirement for the degree of MASTER OF SCIENCE August 1987 Major... Subject: Mechanical Engineering FEATURE SELECTION FOR AUTOMATIC SOLDER JOINT INSPECTION A Thesis by CHENG-CHENG LEE Approved as to style and content by: Morris Driels (Chairman of Committee) Norman Gris ld (Member) i(?? Oren Xlasor'i (kfembef...

Lee, Cheng-Cheng

2012-06-07T23:59:59.000Z

389

Optimized detection of sequence variation in heterozygous genomes using DNA microarrays with  

E-Print Network [OSTI]

. The optimized design and experimental parameters determined in this study should guide DNA microarray designs Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ 08544; c Center is almost 20 years old. A variety of improvements in probe design and experimental conditions have brought

Botstein, David

390

RNAi-Assisted Genome Evolution in Saccharomyces cerevisiae for Complex Phenotype Engineering  

Science Journals Connector (OSTI)

†Department of Chemical and Biomolecular Engineering, ‡Department of Biochemistry, §Departments of Chemistry and Bioengineering, Institute for Genomic Biology, University of Illinois at Urbana?Champaign, Urbana, Illinois 61801, United States ... We then showed the application of RAGE for improved acetic acid tolerance, a key trait for microbial production of chemicals and fuels. ...

Tong Si; Yunzi Luo; Zehua Bao; Huimin Zhao

2014-04-23T23:59:59.000Z

391

Glass Sponges and Bilaterian Animals Share Derived Mitochondrial Genomic Features: A Common Ancestry or Parallel Evolution?  

E-Print Network [OSTI]

Glass Sponges and Bilaterian Animals Share Derived Mitochondrial Genomic Features: A Common Oceanographic Institution, Fort Pierce, Florida Glass sponges (Hexactinellida) are a group of deep-water benthic glass sponges and bilaterian animals, including an Arg / Ser change in the genetic code

Lavrov, Dennis V.

392

Argonne Accelerator Institute  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

AAI Home AAI Home Welcome Accelerators at Argonne Mission Organization History Document Collection Conferences & Workshops Beams and Applications Seminar Argonne-Fermilab Collaboration Lee Teng Scholarship Program Useful Links Organization The Argonne Accelerator Institute is a matrixed organization. Its members and fellows reside in programmatic Argonne divisions. The Institute reports to the Associate Laboratory Director for Photon Science), and the administrative functions of the Institute are within the PSC directorate. Director: Rodney Gerig Associate Director: Hendrik Weerts ( Director of High Energy Physics Division) Associate Director: Sasha Zholents (Director of Accelerator Systems Division) Associate Director: Robert Janssens ( Director of Argonne Physics Division)

393

Human genome. 1993 Program report  

SciTech Connect (OSTI)

The purpose of this report is to update the Human Genome 1991-92 Program Report and provide new information on the DOE genome program to researchers, program managers, other government agencies, and the interested public. This FY 1993 supplement includes abstracts of 60 new or renewed projects and listings of 112 continuing and 28 completed projects. These two reports, taken together, present the most complete published view of the DOE Human Genome Program through FY 1993. Research is progressing rapidly toward 15-year goals of mapping and sequencing the DNA of each of the 24 different human chromosomes.

Not Available

1994-03-01T23:59:59.000Z

394

Challenges in Whole-Genome Annotation of Pyrosequenced Eukaryotic Genomes  

SciTech Connect (OSTI)

Pyrosequencing technologies such as 454/Roche and Solexa/Illumina vastly lower the cost of nucleotide sequencing compared to the traditional Sanger method, and thus promise to greatly expand the number of sequenced eukaryotic genomes. However, the new technologies also bring new challenges such as shorter reads and new kinds and higher rates of sequencing errors, which complicate genome assembly and gene prediction. At JGI we are deploying 454 technology for the sequencing and assembly of ever-larger eukaryotic genomes. Here we describe our first whole-genome annotation of a purely 454-sequenced fungal genome that is larger than a yeast (>30 Mbp). The pezizomycotine (filamentous ascomycote) Aspergillus carbonarius belongs to the Aspergillus section Nigri species complex, members of which are significant as platforms for bioenergy and bioindustrial technology, as members of soil microbial communities and players in the global carbon cycle, and as agricultural toxigens. Application of a modified version of the standard JGI Annotation Pipeline has so far predicted ~;;10k genes. ~;;12percent of these preliminary annotations suffer a potential frameshift error, which is somewhat higher than the ~;;9percent rate in the Sanger-sequenced and conventionally assembled and annotated genome of fellow Aspergillus section Nigri member A. niger. Also,>90percent of A. niger genes have potential homologs in the A. carbonarius preliminary annotation. Weconclude, and with further annotation and comparative analysis expect to confirm, that 454 sequencing strategies provide a promising substrate for annotation of modestly sized eukaryotic genomes. We will also present results of annotation of a number of other pyrosequenced fungal genomes of bioenergy interest.

Kuo, Alan; Grigoriev, Igor

2009-04-17T23:59:59.000Z

395

NERSC Featured Announcements  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Bioinformatics Computing Consultant Position Available October 31, 2011 by Katie Antypas | 0 Comments NERSC and the Joint Genome Institute (JGI) are searching for two individuals...

396

Assignment of Orthologous Genes via Genome Rearrangement  

E-Print Network [OSTI]

Assignment of Orthologous Genes via Genome Rearrangement Xin Chen, Jie Zheng, Zheng Fu, Peng Nan of genomes is a fundamental and challenging problem in comparative genomics. Existing methods that assign sequence similarity and evolutionary events at a genome level, where orthologous genes are assumed

Lonardi, Stefano

397

Shotgun coverage of human genome computing  

E-Print Network [OSTI]

take about 1.5 million pages. The Human Genome Project would not be possible if our revolution were-author collection of chapters on the various uses of computing in the Human Genome Project. Peculiarly absent fromShotgun coverage of human genome computing Human Genome Computing, Second Edition edited by Martin

Eddy, Sean

398

Course Information IB 364: Human Genome and  

E-Print Network [OSTI]

Course Information IB 364: Human Genome and Bioinformatics On this page: � Course Description � Technical Support Course Description Highlights advances in understanding the human genome, utilizing the human genome, applying bioinformatics to the genome, and realizing its potential to understand human

Kent, Angela

399

A Statistical Framework for Spatial Comparative Genomics  

E-Print Network [OSTI]

A Statistical Framework for Spatial Comparative Genomics Rose Hoberman May 2007 CMU-CS-07, or the U.S. Government. #12;Keywords: spatial comparative genomics, comparative genomics, gene clusters, max-gap clusters, gene teams, whole genome duplication, paralogons, synteny, ortholog detection #12

400

Genomics and ornithology Scott V. Edwards  

E-Print Network [OSTI]

REVIEW Genomics and ornithology Scott V. Edwards Received: 23 September 2007 / Accepted: 27 Genomics is revolutionizing ornithology in the same ways it is reinvigorating other biological disciplines. In this review, I will highlight applications of genomics and genomics technologies to the study of the ecology

Edwards, Scott

Note: This page contains sample records for the topic "joint genome institute" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


401

Chapter 14: Genome Assembly and Annotation Process Annotation of other genomes  

E-Print Network [OSTI]

Chapter 14: Genome Assembly and Annotation Process Paul Kitts Summary Box 1 Annotation of other genomes NCBI may assemble a genome prior to annotation, add annotations to a genome assembled elsewhere, or simply process an annotated genome to produce RefSeqs and maps for display in Map Viewer (Chapter 20

Levin, Judith G.

402

The Genome Database Organism-centered listing of available genomic sequence records and projects  

E-Print Network [OSTI]

The Genome Database Organism-centered listing of available genomic sequence records and projects http://www.ncbi.nlm.nih.gov/genome National Center for Biotechnology Information · National Library | NCBI Genome | Last Update August 19, 2013 Contact: info@ncbi.nlm.nih.gov Scope Since 2011, the Genome

Levin, Judith G.

403

Growth Temperature and Genome Size in Bacteria Are Negatively Correlated, Suggesting Genomic Streamlining  

E-Print Network [OSTI]

Growth Temperature and Genome Size in Bacteria Are Negatively Correlated, Suggesting Genomic.wagner@ieu.uzh.ch; nsabath@gmail.com. Accepted: March 25, 2013 Abstract Prokaryotic genomes are small and compact. Either this feature is caused by neutral evolution or by natural selection favoring small genomes--genome streamlining

Wagner, Andreas

404

Extreme Genomics By Scouring the Genomes of 50 HIV-Resistant People, Study  

E-Print Network [OSTI]

Extreme Genomics By Scouring the Genomes of 50 HIV-Resistant People, Study Takes Aim at Rare Gene Genome Variation, and his colleagues think that the complete genome sequences of those fortunate few against the viral strain that usually infects humans. That's because the CCR5 protein is Extreme Genomics

Dolbow, John

405

Petroleum Institute Scholarly Publications  

E-Print Network [OSTI]

Abu Dhabi The Petroleum Institute Scholarly Publications 2009 #12 Mechanical Engineering HHaaddii BBeellhhaajj Petroleum Engineering SSaaddoooonn MMoorraadd Petroleum LLaannggiillllee Advanced University Placement Editors' notes: Names in bold in citations indicate Petroleum

406

Critical Materials Institute  

ScienceCinema (OSTI)

Ames Laboratory Director Alex King talks about the goals of the Critical Materials Institute in diversifying the supply of critical materials, developing substitute materials, developing tools and techniques for recycling critical materials, and forecasting materials needs to avoid future shortages.

Alex King

2013-06-05T23:59:59.000Z

407

INSTITUTE COLLOQUIA AND SEMINARS  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

April 16 M. Sanchez-Vega and V. E. Jacob, Cyclotron Institute, Texas A&M University Test of the Unitarity of the CKM Matrix via Superallowed + decay. April 23 Dr. Subrata...

408

Low Dose Radiation Research Program: Induction of Genomic Instability in  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Induction of Genomic Instability in vivo by Low Doses of 137Cs y Induction of Genomic Instability in vivo by Low Doses of 137Cs y rays, Authors: K. Rithidech1, E.B. Whorton2, M. Tungjai1, E. Ar-Bab1, S.R. Simon1, M. Tawde3 and C.W. Anderson3. Institutions: 1Pathology Department, Stony Brook University, NY 11794-8691, USA, 2University of Texas Medical Branch at Galveston, TX 77550-1047,3Biology Department, Brookhaven National Laboratory, Upton, NY 11973-5000. Information on potential health hazards of radiation at doses below or equal to the level traditionally requiring human radiation protection (less than or equal to 10 cGy) is currently lacking. It is therefore important to characterize early and subsequent in vivo biological response induced by low doses of ionizing radiation because such data should provide information that can help determine whether radiation at this dose level

409

Comparative Genomics of Gossypium spp. through GBS and Candidate Genes – Delving into the Controlling Factors behind Photoperiodic Flowering  

E-Print Network [OSTI]

COMPARATIVE GENOMICS OF GOSSYPIUM SPP. THROUGH GBS AND CANDIDATE GENES ? DELVING INTO THE CONTROLLING FACTORS BEHIND PHOTOPERIODIC FLOWERING A Dissertation by CARLA JO LOGAN YOUNG Submitted to the Office of Graduate Studies of Texas A.../Deletion Polymorphism IPGB Institute for Plant Genomics and Biotechnology Ka Non-synonymous Nucleotide Substitution Rate kb Kilobase(s) kDa KiloDalton Ks Synonymous Nucleotide Substitution Rate LD Long Day LD Linkage Disequilibrium MAS Marker Assisted...

Young, Carla Jo Logan

2013-08-09T23:59:59.000Z

410

Determine Institutional Change Sustainability Goals | Department...  

Office of Energy Efficiency and Renewable Energy (EERE) Indexed Site

Determine Institutional Change Sustainability Goals Determine Institutional Change Sustainability Goals Institutional Change Continuous Improvement Cycle The first step in the...

411

Institutional Change for Sustainability Contacts | Department...  

Office of Energy Efficiency and Renewable Energy (EERE) Indexed Site

Institutional Change for Sustainability Contacts Institutional Change for Sustainability Contacts For more information about institutional change for sustainability, contact: Jerry...

412

Institutional Change Process for Sustainability  

Broader source: Energy.gov [DOE]

For establishing institutional change in a Federal agency to achieve sustainability or other energy efficiency goals, follow the five-step institutional change process. In accordance with the...

413

Strategies for Achieving Institutional Change  

Broader source: Energy.gov [DOE]

Many strategies—including those derived from Institutional Change Principles–may be used to effect institutional change in support of energy and sustainability objectives.

414

10.1101/gr.133330.111Access the most recent version at doi: published online March 27, 2012Genome Res.  

E-Print Network [OSTI]

Kingdom; 5 Department of Biology, Institute of Molecular Systems Biology, ETH Zurich, 8093 Zurich, Switzerland; 6 Functional Genomics Center, ETH and University of Zurich, 8057 Zurich, Switzerland; 7 Laval of Science, University of Zurich, 8057 Zurich, Switzerland; 10 Institute of Pharmaceutical Sciences, ETH

Miska, Eric

415

Handbook on dynamics of jointed structures.  

SciTech Connect (OSTI)

The problem of understanding and modeling the complicated physics underlying the action and response of the interfaces in typical structures under dynamic loading conditions has occupied researchers for many decades. This handbook presents an integrated approach to the goal of dynamic modeling of typical jointed structures, beginning with a mathematical assessment of experimental or simulation data, development of constitutive models to account for load histories to deformation, establishment of kinematic models coupling to the continuum models, and application of finite element analysis leading to dynamic structural simulation. In addition, formulations are discussed to mitigate the very short simulation time steps that appear to be required in numerical simulation for problems such as this. This handbook satisfies the commitment to DOE that Sandia will develop the technical content and write a Joints Handbook. The content will include: (1) Methods for characterizing the nonlinear stiffness and energy dissipation for typical joints used in mechanical systems and components. (2) The methodology will include practical guidance on experiments, and reduced order models that can be used to characterize joint behavior. (3) Examples for typical bolted and screw joints will be provided.

Ames, Nicoli M.; Lauffer, James P.; Jew, Michael D.; Segalman, Daniel Joseph; Gregory, Danny Lynn; Starr, Michael James; Resor, Brian Ray

2009-07-01T23:59:59.000Z

416

2010 Howard Hughes Medical Institute 2010 Howard Hughes Medical Institute  

E-Print Network [OSTI]

FOR THE PROGRAM · U.S. citizenship not required · In good standing at a medical, dental, or veterinary school6071, for further information. Joint Initiative ­ Interventional Radiology · Joint initiative research in interventional radiology. For students interested in IR, feel free to contact Dr. Michael

Bushman, Frederic

417

Abstract A33: Exploring pediatric cancer genomics with the UCSC Cancer Genomics Browser  

Science Journals Connector (OSTI)

...University of California, Santa Cruz, CA. The UCSC Cancer Genomics Browser (https://genome-cancer.ucsc.edu) is a set of web-based tools to display, investigate and analyze cancer genomics data and associated clinical data. Experimental quantities...

Melissa Cline; Olena Morozova; Teresa Swatloski; Brian Craft; Mary Goldman; David Haussler; Jingchun Zhu

2014-10-15T23:59:59.000Z

418

Joint measurability, steering and entropic uncertainty  

E-Print Network [OSTI]

The notion of incompatibility of measurements in quantum theory is in stark contrast with the corresponding classical perspective, where all physical observables are jointly measurable. It is of interest to examine if the results of two or more measurements in the quantum scenario can be perceived from a classical point of view or they still exhibit non-classical features. Clearly, commuting observables can be measured jointly using projective measurements and their statistical outcomes can be discerned classically. However, such simple minded association of compatibility of measurements with commutativity turns out to be limited in an extended framework, where the usual notion of sharp projective valued measurements of self adjoint observables gets broadened to include unsharp measurements of generalized observables constituting positive operator valued measures (POVM). There is a surge of research activity recently towards gaining new physical insights on the emergence of classical behavior via joint measurability of unsharp observables. Here, we explore the entropic uncertainty relation for a pair of discrete observables (of Alice's system) when an entangled quantum memory of Bob is restricted to record outcomes of jointly measurable POVMs only. Within the joint measurability regime, the sum of entropies associated with Alice's measurement outcomes - conditioned by the results registered at Bob's end - are constrained to obey an entropic steering inequality. In this case, Bob's non-steerability reflects itself as his inability in predicting the outcomes of Alice's pair of non-commuting observables with better precision, even when they share an entangled state. As a further consequence, the quantum advantage envisaged for the construction of security proofs in key distribution is lost, when Bob's measurements are restricted to the joint measurability regime.

H. S. Karthik; A. R. Usha Devi; A. K. Rajagopal

2014-10-05T23:59:59.000Z

419

Towards a standards-compliant genomic and metagenomic publication record  

SciTech Connect (OSTI)

Increasingly we are aware as a community of the growing need to manage the avalanche of genomic and metagenomic data, in addition to related data types like ribosomal RNA and barcode sequences, in a way that tightly integrates contextual data with traditional literature in a machine-readable way. It is for this reason that the Genomic Standards Consortium (GSC) formed in 2005. Here we suggest that we move beyond the development of standards and tackle standards-compliance and improved data capture at the level of the scientific publication. We are supported in this goal by the fact that the scientific community is in the midst of a publishing revolution. This revolution is marked by a growing shift away from a traditional dichotomy between 'journal articles' and 'database entries' and an increasing adoption of hybrid models of collecting and disseminating scientific information. With respect to genomes and metagenomes and related data types, we feel the scientific community would be best served by the immediate launch of a central repository of short, highly structured 'Genome Notes' that must be standards-compliant. This could be done in the context of an existing journal, but we also suggest the more radical solution of launching a new journal. Such a journal could be designed to cater to a wide range of standards-related content types that are not currently centralized in the published literature. It could also support the demand for centralizing aspects of the 'gray literature' (documents developed by institutions or communities) such as the call by the GSCl for a central repository of Standard Operating Procedures describing the genomic annotation pipelines of the major sequencing centers. We argue that such an 'eJournal', published under the Open Access paradigm by the GSC, could be an attractive publishing forum for a broader range of standardization initiatives within, and beyond, the GSC and thereby fill an unoccupied yet increasingly important niche within the current research landscape.

Fenner, Marsha W; Garrity, George M.; Field, Dawn; Kyrpides, Nikos; Hirschman, Lynette; San-sone, Susanna-Assunta; Anguiloi, Samuel; Cole, James R.; Glockner, Frank Oliver; Kolker, Eugene; Kowaluchuk, George; Moran, Mary Ann; Ussery, Dave; White, Owen

2008-04-01T23:59:59.000Z

420

Mexico joins the venture: Joint Implementation and Greenhouse Gas Emissions  

SciTech Connect (OSTI)

Joint Implementation (JI) and its pilot phase of Activities Implemented Jointly (AIJ) are envisioned as an economic way of reducing global emissions of greenhouse gases. This paper draws upon the Mexican experience with AIJ to identify Mexican concerns with AIJ/JI and proposed solutions to these. Three approved Mexican AIJ projects (Ilumex, Scolel Te, and Salicornia) are described in detail. The Ilurnex project promotes the use of compact fluorescent lamps in Mexican homes of the States of Jalisco and Nuevo Leon, to reduce electric demand. Scolel Te is a sustainable forest management project in Chiapas. Salicornia examines the potential for carbon sequestration with a Halophyte-based crop irrigated with saline waters in Sonora. These three projects are reviewed to clarify the issues and concerns that Mexico has with AIJ and JI and propose measures to deal with them. These initial Mexican AIJ projects show that there is a need for creation of standard project evaluation procedures, and criteria and institutions to oversee project design, selection, and implementation. Further JI development will be facilitated by national and international clarification of key issues such as additionality criteria, carbon-credit sharing, and valuation of non-GHG environmental and/or social benefits and impacts for AIJ projects. Mexico is concerned that JI funding could negatively impact official development assistance or that OECD countries will use JI to avoid taking significant GHG mitigation actions in their own countries. The lack of carbon credit trading in the AIJ stage must be removed to provide useful experience on how to share carbon credits. National or international guidelines are needed to ensure that a portion of the carbon credits is allocated to Mexico.

Imaz, M.; Gay, C.; Friedmann, R.; Goldberg, B.

1998-11-01T23:59:59.000Z

Note: This page contains sample records for the topic "joint genome institute" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


421

National Institute of Agricultural Botany  

Science Journals Connector (OSTI)

... D. M. Wills, directed attention to the value of the Institute's system of substations. By means of this organization the Institute is able to make recommendations to farmers ... and Scarborough. There are at present two defective links in the Institute's chain of substations—the Fens and Wales—and the Institute hopes that these defects will shortly be remedied ...

1937-11-13T23:59:59.000Z

422

INSTITUTE ON ASSETS & SOCIAL POLICY  

E-Print Network [OSTI]

INSTITUTE ON ASSETS & SOCIAL POLICY LIVING LONGER ON LESS IN MASSACHUSETTS: THE NEW ECONOMIC (IN)SECURITY OF SENIORS Tatjana Meschede Laura Sullivan Thomas Shapiro #12;About the Institute on Assets and Social Policy The Institute on Assets and Social Policy (IASP), a research institute at the Heller School for Social Policy

Snider, Barry B.

423

Argonne Accelerator Institute  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

AAI Home AAI Home Welcome Accelerators at Argonne Mission Organization History Document Collection Conferences & Workshops Beams and Applications Seminar Argonne-Fermilab Collaboration Lee Teng Scholarship Program Useful Links Argonne Accelerator Institute In 2006, Argonne Laboratory Director Robert Rosner formed the AAI as a focal point for accelerator initiatives. The institute works to utilize Argonne's extensive accelerator resources, to enhance existing facilities, to determine the future of accelerator development and construction, and to oversee a dynamic and acclaimed accelerator physics portfolio. More Information for: Members * Students Industrial Collaborators - Working with Argonne Link to: Accelerators for America's Future Upcoming Events and News 4th International Particle Accelerator Conference (IPAC'13)

424

Proceedings of the Third CIPS-SIGHAN Joint Conference on Chinese Language Processing, pages 96100, Wuhan, China, 20-21 October 2014  

E-Print Network [OSTI]

Proceedings of the Third CIPS-SIGHAN Joint Conference on Chinese Language Processing, pages 96 for CIPS-SIGHAN'2014 Bakeoff Lu Xiang Xiaoqing Li Yu Zhou Institute of Automation Chinese Academy for the CIPS- SIGHAN-2014 bakeoff task of Chinese word segmentation. This system adopts a character- based

425

Institut Farman 6eme Journe  

E-Print Network [OSTI]

Institut Farman 6eme Journée Institut Farman Jeudi 22 Novembre 2012 FR3311 CNRS www.farman.ens-cachan.fr #12;Institut Farman Les projets Farman ont donné lieu depuis 2007 à 28 projets dont 10 en cours ASTECH (2 thèses en co-direction LMT/SATIE) #12;Institut Farman L'Institut Farman c'est aussi : Equipex

426

Human Genome Education Program  

SciTech Connect (OSTI)

The funds from the DOE Human Genome Program, for the project period 2/1/96 through 1/31/98, have provided major support for the curriculum development and field testing efforts for two high school level instructional units: Unit 1, ''Exploring Genetic Conditions: Genes, Culture and Choices''; and Unit 2, ''DNA Snapshots: Peaking at Your DNA''. In the original proposal, they requested DOE support for the partial salary and benefits of a Field Test Coordinator position to: (1) complete the field testing and revision of two high school curriculum units, and (2) initiate the education of teachers using these units. During the project period of this two-year DOE grant, a part-time Field-Test Coordinator was hired (Ms. Geraldine Horsma) and significant progress has been made in both of the original proposal objectives. Field testing for Unit 1 has occurred in over 12 schools (local and non-local sites with diverse student populations). Field testing for Unit 2 has occurred in over 15 schools (local and non-local sites) and will continue in 12-15 schools during the 96-97 school year. For both curricula, field-test sites and site teachers were selected for their interest in genetics education and in hands-on science education. Many of the site teachers had no previous experience with HGEP or the unit under development. Both of these first-year biology curriculum units, which contain genetics, biotechnology, societal, ethical and cultural issues related to HGP, are being implemented in many local and non-local schools (SF Bay Area, Southern California, Nebraska, Hawaii, and Texas) and in programs for teachers. These units will reach over 10,000 students in the SF Bay Area and continues to receive support from local corporate and private philanthropic organizations. Although HGEP unit development is nearing completion for both units, data is still being gathered and analyzed on unit effectiveness and student learning. The final field testing result from this analysis will contribute to the final revisions of each unit during the second-year of this grant.

Richard Myers; Lane Conn

2000-05-01T23:59:59.000Z

427

Joint Inverted Indexing Kaiming He2  

E-Print Network [OSTI]

Joint Inverted Indexing Yan Xia1 Kaiming He2 Fang Wen2 Jian Sun2 1 University of Science and Technology of China 2 Microsoft Research Asia Abstract Inverted indexing is a popular non-exhaustive solution to large scale search. An inverted file is built by a quantizer such as k-means or a tree structure. It has

Bernstein, Phil

428

Jointly organised by HKU CIVIL ENGRG. DEPT.  

E-Print Network [OSTI]

SEMINAR Jointly organised by and HKU CIVIL ENGRG. DEPT. Centre for Infrastructure and Construction Industry Development THE USE OF TRENCHLESS TECHNOLOGY FOR THE IMPROVEMENT OF URBAN HABITATS by Ian, vibration, and air pollution. The frustration this causes is aggravated by the knowledge that there often

Tam, Vincent W. L.

429

Dashboards in Higher UMACRAO/WACRAO Joint  

E-Print Network [OSTI]

Dashboards in Higher Education UMACRAO/WACRAO Joint Conference November 1-3, 2006 Phil Hull-UW Madison, Office of the Registrar Jason Haverly-UW River Falls, Information Technology Services Gery informed decisions based on collected BI (business intelligence) ·Align strategies and organizational goals

Wisconsin at Madison, University of

430

Joint with application in electrochemical devices  

DOE Patents [OSTI]

A joint for use in electrochemical devices, such as solid oxide fuel cells (SOFCs), oxygen separators, and hydrogen separators, that will maintain a hermetic seal at operating temperatures of greater than 600.degree. C., despite repeated thermal cycling excess of 600.degree. C. in a hostile operating environment where one side of the joint is continuously exposed to an oxidizing atmosphere and the other side is continuously exposed to a wet reducing gas. The joint is formed of a metal part, a ceramic part, and a flexible gasket. The flexible gasket is metal, but is thinner and more flexible than the metal part. As the joint is heated and cooled, the flexible gasket is configured to flex in response to changes in the relative size of the metal part and the ceramic part brought about by differences in the coefficient of thermal expansion of the metal part and the ceramic part, such that substantially all of the tension created by the differences in the expansion and contraction of the ceramic and metal parts is absorbed and dissipated by flexing the flexible gasket.

Weil, K Scott [Richland, WA; Hardy, John S [Richland, WA

2010-09-14T23:59:59.000Z

431

Enhancer Identification through Comparative Genomics  

SciTech Connect (OSTI)

With the availability of genomic sequence from numerousvertebrates, a paradigm shift has occurred in the identification ofdistant-acting gene regulatory elements. In contrast to traditionalgene-centric studies in which investigators randomly scanned genomicfragments that flank genes of interest in functional assays, the modernapproach begins electronically with publicly available comparativesequence datasets that provide investigators with prioritized lists ofputative functional sequences based on their evolutionary conservation.However, although a large number of tools and resources are nowavailable, application of comparative genomic approaches remains far fromtrivial. In particular, it requires users to dynamically consider thespecies and methods for comparison depending on the specific biologicalquestion under investigation. While there is currently no single generalrule to this end, it is clear that when applied appropriately,comparative genomic approaches exponentially increase our power ingenerating biological hypotheses for subsequent experimentaltesting.

Visel, Axel; Bristow, James; Pennacchio, Len A.

2006-10-01T23:59:59.000Z

432

Perimeter Institute Cosmic Acceleration  

E-Print Network [OSTI]

Wayne Hu Perimeter Institute April 2010 Cosmic Acceleration Dark Energy v. Modified Gravity #12;Outline · Dark Energy vs Modified Gravity · Three Regimes of Modified Gravity · Worked (Toy) Models: f 1998 Discovery #12;Mercury or Pluto? General relativity says Gravity = Geometry And Geometry = Matter-Energy

Hu, Wayne

433

Cancer Research Beckman Institute  

E-Print Network [OSTI]

Cancer Research Beckman Institute FOR ADVANCED SCIENCE AND TECHNOLOGY #12;T The medical and scientific worlds have known for many years that in order to truly understand and treat cancer, the fight has and cancerous tumors have to first be visualized at the smallest scales possible, and then treated in the most

Illinois at Urbana-Champaign, University of

434

Michigan Institute Science and  

E-Print Network [OSTI]

Michigan Institute for Plasma Science and Engineering Seminar Universal Magnetic Structures Prof. Mark Moldwin Dept. of Atmospheric, Oceanic and Space Sciences University of Michigan Thursday, 19 Nov and provide examples on how thinking about discrete structures can add to our understanding of the solar

Shyy, Wei

435

Parameter identification for joint elements in a revolute-joint detector manipulator.  

SciTech Connect (OSTI)

A revolute-joint robot is being developed for the spatial positioning of an x-ray detector at the Advanced Photon Source. Commercially available revolute-joint manipulators do not meet our size, positioning, or payload specifications. One idea being considered is the modification of a commercially available robot, with the goal of improving the repeatability and trajectory accuracy. Theoretical, computational, and experimental procedures are being used to (1) identify, (2) simulate the dynamics of an existing robot system using a multibody approach, and eventually (3) design an improved version, with low dynamic positioning uncertainty. A key aspect of the modeling and performance prediction is accurate stiffness and damping values for the robot joints. This paper discusses the experimental identification of the stiffness and damping parameters for one robot harmonic drive joint.

Preissner, C.; Shu, D.; Royston, T.; Experimental Facilities Division (APS); Univ. of Illinois at Chicago

2005-01-01T23:59:59.000Z

436

Fuel Cell Technologies Office: Joint Fuel Cell Bus Workshop  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Joint Fuel Cell Bus Joint Fuel Cell Bus Workshop to someone by E-mail Share Fuel Cell Technologies Office: Joint Fuel Cell Bus Workshop on Facebook Tweet about Fuel Cell Technologies Office: Joint Fuel Cell Bus Workshop on Twitter Bookmark Fuel Cell Technologies Office: Joint Fuel Cell Bus Workshop on Google Bookmark Fuel Cell Technologies Office: Joint Fuel Cell Bus Workshop on Delicious Rank Fuel Cell Technologies Office: Joint Fuel Cell Bus Workshop on Digg Find More places to share Fuel Cell Technologies Office: Joint Fuel Cell Bus Workshop on AddThis.com... Publications Program Publications Technical Publications Educational Publications Newsletter Program Presentations Multimedia Conferences & Meetings Annual Merit Review Proceedings Workshop & Meeting Proceedings Webinars

437

Third National Report for the Joint Convention on the Safety...  

Office of Environmental Management (EM)

for the Joint Convention on the Safety of Spent Fuel Management and on the Safety of Radioactive Waste Management Third National Report for the Joint Convention on the Safety...

438

Second National Report for the Joint Convention on the Safety...  

Office of Environmental Management (EM)

for the Joint Convention on the Safety of Spent Fuel Management and on the Safety of Radioactive Waste Management Second National Report for the Joint Convention on the Safety...

439

Fourth National Report for the Joint Convention on the Safety...  

Broader source: Energy.gov (indexed) [DOE]

for the Joint Convention on the Safety of Spent Fuel Management and on the Safety of Radioactive Waste Management Fourth National Report for the Joint Convention on the Safety...

440

Alternative Fuels Data Center: Joint Use of Government Fueling  

Alternative Fuels and Advanced Vehicles Data Center [Office of Energy Efficiency and Renewable Energy (EERE)]

Joint Use of Joint Use of Government Fueling Infrastructure to someone by E-mail Share Alternative Fuels Data Center: Joint Use of Government Fueling Infrastructure on Facebook Tweet about Alternative Fuels Data Center: Joint Use of Government Fueling Infrastructure on Twitter Bookmark Alternative Fuels Data Center: Joint Use of Government Fueling Infrastructure on Google Bookmark Alternative Fuels Data Center: Joint Use of Government Fueling Infrastructure on Delicious Rank Alternative Fuels Data Center: Joint Use of Government Fueling Infrastructure on Digg Find More places to share Alternative Fuels Data Center: Joint Use of Government Fueling Infrastructure on AddThis.com... More in this section... Federal State Advanced Search All Laws & Incentives Sorted by Type

Note: This page contains sample records for the topic "joint genome institute" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


441

2014 SAME Mid-Atlantic Regional Joint Engineer Training Symposium...  

Office of Energy Efficiency and Renewable Energy (EERE) Indexed Site

SAME Mid-Atlantic Regional Joint Engineer Training Symposium (JETS) 2014 SAME Mid-Atlantic Regional Joint Engineer Training Symposium (JETS) November 12, 2014 8:00AM EST to...

442

Genomics, Intellectual Disability, and Autism  

Science Journals Connector (OSTI)

To the Editor: Mefford et al. (Feb. 23 issue) provide an excellent review of the genomic factors in autism but do not mention that the quantitative contribution of the enumerated genetic factors to the rates of autism is small, as compared with the contribution of nongenomic (i.e. environmental)... To the Editor: Mefford et al. (Feb. 23 issue)1 provide an excellent review of the genomic factors in autism but do not mention that the quantitative contribution of the enumerated genetic factors to the rates of autism is small, as compared with the ...

2012-06-07T23:59:59.000Z

443

Genomics, Health Care, and Society  

Science Journals Connector (OSTI)

To the Editor: Hudson, in her otherwise comprehensive review article on genomic medicine (Sept. 15 issue), did not mention the issue of reimbursement and the role of payers such as the Centers for Medicare and Medicaid Services. In my outpatient clinic, many patients decline testing for a BRCA... To the Editor: Hudson, in her otherwise comprehensive review article on genomic medicine (Sept. 15 issue),1 did not mention the issue of reimbursement and the role of payers such as the Centers for Medicare and Medicaid Services. In my outpatient clinic, ...

2011-12-15T23:59:59.000Z

444

; Evolution of genes and genomes on the Drosophila phylogeny  

E-Print Network [OSTI]

ARTICLES ; Evolution of genes and genomes on the Drosophila phylogeny Drosophila 12 Genomes Consortium* Comparative analysis of multiple genomes in a phylogenetic framework dramatically improves the precision and sensitivity of evolutionary inference, producing more robust results than single-genome

Kellis, Manolis

445

Kin selection, genomics and caste-antagonistic pleiotropy  

Science Journals Connector (OSTI)

...Special feature 1001 14 70 Kin selection, genomics and caste-antagonistic pleiotropy David...evolution of social behaviours. The genomics revolution now provides the opportunity...Outlook: kin selection and social insect genomics The revolution in social insect genomics...

2013-01-01T23:59:59.000Z

446

Genome and proteome annotation: organization, interpretation and integration  

Science Journals Connector (OSTI)

...In addition, the Human Genome Variation Society aims...of genomic variation information. With this in mind...variation within the human genome. The elucidation of...beginning of the 1000 genomes project (Siva 2008) aims to...

2009-01-01T23:59:59.000Z

447

17 - Protecting Commercial and Institutional Critical Infrastructure  

Science Journals Connector (OSTI)

This chapter focuses on protecting commercial and institutional sectors, including retail businesses, banks and financial businesses, educational institutions (a subsector of government facilities), and healthcare and public health institutions. Each of these topics begins with a broad perspective from U.S. Department of Homeland Security Sector-Specific Plans. Keywords shrinkage, shopping service, checkout counters, point-of-sale (POS) accounting systems, exception reporting, counterfeiting, kleptomania, organized retail theft, electronic article surveillance, source tagging, civil recovery, robbery, burglary, substitutability, U.S. Department of the Treasury, Bank Protection Act (BPA) of 1968, savings and loan (S&L) scandal, Bank Secrecy Act of 1986, Anti-Drug Abuse Act of 1988, The Antiterrorism and Effective Death Penalty Act of 1996, Gramm-Leach-Bliley Act of 1999, USA Patriot Act of 2001, Sarbanes-Oxley (SOX) Act of 2002, Regulation H, Code of Federal Regulations, suspicious activity reports, money laundering, tear gas/dye packs, Global Positioning System (GPS), skimming, Gun-Free Schools Act, zero-tolerance policy, Family Educational Rights and Privacy Act, Gang Resistance Education and Training (GREAT), “soft” targets, Safe and Drug-Free Schools and Communities Act, “hard” targets, Columbine High School massacre, Beslan Elementary School massacre, Virginia Tech massacre, Student-Right-to-Know and Campus Security Act of 1990, Campus Sexual Assault Victims’ Bill of Rights, community policing, Emergency Medical Treatment and Active Labor Act, Health Insurance Portability and Accountability Act of 1996 (HIPAA), The Joint Commission, National Center for Missing and Exploited Children, Controlled Substances Act of 1970, first receivers, personal protective equipment (PPE), Public Health Security and Bioterrorism Preparedness and Response Act of 2002, Centers for Disease Control and Prevention (CDC)

Philip P. Purpura

2013-01-01T23:59:59.000Z

448

Joint Fuel Cell Technologies and Advanced Manufacturing Webinar  

Broader source: Energy.gov [DOE]

Presentation slides from the joint Fuel Cell Technologies Office and Advanced Manufacturing Office webinar held November 20, 2012.

449

SPIDERS Joint Capability Technology Demonstration Industry Day Presentations  

Broader source: Energy.gov [DOE]

Presentations from the SPIDERS Joint Capability Technology Demonstration Industry Day, which occurred on April 22, 2014, at Fort Carson, Colorado.

450

Development and test of the ITER conductor joints  

SciTech Connect (OSTI)

Joints for the ITER superconducting Central Solenoid should perform in rapidly varying magnetic field with low losses and low DC resistance. This paper describes the design of the ITER joint and presents its assembly process. Two joints were built and tested at the PTF facility at MIT. Test results are presented, losses in transverse and parallel field and the DC performance are discussed. The developed joint demonstrates sufficient margin for baseline ITER operating scenarios.

Martovetsky, N., LLNL

1998-05-14T23:59:59.000Z

451

Strategies and tools for whole genome alignments  

SciTech Connect (OSTI)

The availability of the assembled mouse genome makespossible, for the first time, an alignment and comparison of two largevertebrate genomes. We have investigated different strategies ofalignment for the subsequent analysis of conservation of genomes that areeffective for different quality assemblies. These strategies were appliedto the comparison of the working draft of the human genome with the MouseGenome Sequencing Consortium assembly, as well as other intermediatemouse assemblies. Our methods are fast and the resulting alignmentsexhibit a high degree of sensitivity, covering more than 90 percent ofknown coding exons in the human genome. We have obtained such coveragewhile preserving specificity. With a view towards the end user, we havedeveloped a suite of tools and websites for automatically aligning, andsubsequently browsing and working with whole genome comparisons. Wedescribe the use of these tools to identify conserved non-coding regionsbetween the human and mouse genomes, some of which have not beenidentified by other methods.

Couronne, Olivier; Poliakov, Alexander; Bray, Nicolas; Ishkhanov,Tigran; Ryaboy, Dmitriy; Rubin, Edward; Pachter, Lior; Dubchak, Inna

2002-11-25T23:59:59.000Z

452

A Gene Map of the Human Genome  

Science Journals Connector (OSTI)

...sanger.ac.uk/ Stanford Human Genome Center http://www-shgc.stanford.edu/ Wellcome Trust Centre for Human...sanger.ac.ukl Stanford Human Genome Center http://www-shgc.stanford.edu/ Wellcome Trust Centre for Human Genetics http...

G. D. Schuler; M. S. Boguski; E. A. Stewart; L. D. Stein; G. Gyapay; K. Rice; R. E. White; P. Rodriguez-Tomé; A. Aggarwal; E. Bajorek; S. Bentolila; B. B. Birren; A. Butler; A. B. Castle; N. Chiannilkulchai; A. Chu; C. Clee; S. Cowles; P. J. R. Day; T. Dibling; N. Drouot; I. Dunham; S. Duprat; C. East; C. Edwards; J.-B. Fan; N. Fang; C. Fizames; C. Garrett; L. Green; D. Hadley; M. Harris; P. Harrison; S. Brady; A. Hicks; E. Holloway; L. Hui; S. Hussain; C. Louis-Dit-Sully; J. Ma; A. MacGilvery; C. Mader; A. Maratukulam; T. C. Matise; K. B. McKusick; J. Morissette; A. Mungall; D. Muselet; H. C. Nusbaum; D. C. Page; A. Peck; S. Perkins; M. Piercy; F. Qin; J. Quackenbush; S. Ranby; T. Reif; S. Rozen; C. Sanders; X. She; J. Silva; D. K. Slonim; C. Soderlund; W.-L. Sun; P. Tabar; T. Thangarajah; N. Vega-Czarny; D. Vollrath; S. Voyticky; T. Wilmer; X. Wu; M. D. Adams; C. Auffray; N. A. R. Walter; R. Brandon; A. Dehejia; P. N. Goodfellow; R. Houlgatte; J. R. Hudson Jr.; S. E. Ide; K. R. Iorio; W. Y. Lee; N. Seki; T. Nagase; K. Ishikawa; N. Nomura; C. Phillips; M. H. Polymeropoulos; M. Sandusky; K. Schmitt; R. Berry; K. Swanson; R. Torres; J. C. Venter; J. M. Sikela; J. S. Beckmann; J. Weissenbach; R. M. Myers; D. R. Cox; M. R. James; D. Bentley; P. Deloukas; E. S. Lander; T. J. Hudson

1996-10-25T23:59:59.000Z

453

Unlocking the Secrets of the Genome  

E-Print Network [OSTI]

The primary objective of the Human Genome Project was to produce high-quality sequences not just for the human genome but also for those of the chief model organisms: Escherichia coli, yeast (Saccharomyces cerevisiae), ...

Celniker, Susan E.

454

Comparative Sequencing of Plant Genomes: Choices to Make The first sequenced genome of a plant,  

E-Print Network [OSTI]

COMMENTARY Comparative Sequencing of Plant Genomes: Choices to Make The first sequenced genome of a plant, Arabidopsis thaliana, was published ,6 years ago (Arabidopsis Genome Initiative, 2000). Since that time, the complete rice genome (Oryza sativa; Goff et al., 2002; Yu et al., 2002; International Rice

Purugganan, Michael D.

455

A Possible Genome To Architecture Project (GenToA) [The Meta-Genome Project?  

E-Print Network [OSTI]

concern about the Human Genome project, comparing it with buying a book written in a language nobodyA Possible Genome To Architecture Project (GenToA) [The Meta-Genome Project?] Installed: 2 Aug 2010 can a genome specify an information-processing architecture that grows itself guided by interaction

Sloman, Aaron

456

Whole-genome shotgun assembly and comparison of human genome assemblies  

E-Print Network [OSTI]

Whole-genome shotgun assembly and comparison of human genome assemblies Sorin Istraila , Granger G a whole-genome shotgun assembly (called WGSA) of the human genome generated at Celera in 2001. The Celera. With the nearly complete human DNA sequence [National Center for Biotechnology Information (NCBI) Build 34] now

Shatkay, Hagit

457

Population genomics20-02-2009 Antnio Rodrigues; Bruno Santos / 59 Population Genomics  

E-Print Network [OSTI]

Population genomics20-02-2009 António Rodrigues; Bruno Santos / 59 Population Genomics 1 António Rodrigues (PDBC 2008) Bruno Santos (PDBC 2008) #12;Population genomics20-02-2009 António Rodrigues; Bruno Santos / 59 Contents 2 2 1000 genome project 1 Motivation and Introduction New generation sequencing

Goldschmidt, Christina

458

Genome Sequence of the Pea Aphid Acyrthosiphon The International Aphid Genomics Consortium"  

E-Print Network [OSTI]

Genome Sequence of the Pea Aphid Acyrthosiphon pisum The International Aphid Genomics Consortium we present the 464 Mb draft genome assembly of the pea aphid Acyrthosiphon pisum. This first published whole genome sequence of a basal hemimetabolous insect provides an outgroup to the multiple

Paris-Sud XI, Université de

459

FCTO Projects and the Materials Genome Initiative  

Broader source: Energy.gov [DOE]

Download presentation slides from the DOE Fuel Cell Technologies Office webinar, Materials Genome Initiative, held on December 2, 2014.

460

GDB - Human Genome Database final report  

SciTech Connect (OSTI)

This is the DOE final report for the GDB, Human Genome Database, project at the Johns Hopkins University.

Talbot, C. Conover, Jr.

2002-01-08T23:59:59.000Z

Note: This page contains sample records for the topic "joint genome institute" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


461

Institution Name Institution Name Address Place Zip Notes Website Region  

Open Energy Info (EERE)

Institute for the Built Environment CSU Institute for the Built Institute for the Built Environment CSU Institute for the Built Environment Oval Drive Fort Collins Colorado http www ibe colostate edu Rockies Area Colorado Renewable Energy Collaboratory Colorado Renewable Energy Collaboratory th Street Suite Denver Colorado http www coloradocollaboratory org Rockies Area Colorado School of Mines Colorado Energy Research Institute Colorado School of Mines Colorado Energy Research Institute Illinois Street Golden Colorado http www ceri mines org Rockies Area Denver University International Institute for Environment and Enterprise Denver University International Institute for Environment and Enterprise S University Blvd Denver Colorado http www du edu enviro Research htm Rockies Area EverSealed Windows Inc EverSealed Windows Inc Interlocken Drive Evergreen

462

International Financial Reporting Standards (IFRS) and the Institutional Environment: Their Joint Impact on Accounting Comparability  

E-Print Network [OSTI]

research explicitly considers either the determinants or benefits of comparability because of difficulty in identifying and measuring the theoretical construct of comparability. Further, the widespread global adoption of IFRS, a relatively homogenous set...

Neel, Michael J.

2012-10-19T23:59:59.000Z

463

Jointly sponsored by the WV Geriatric Education Center and CAMC Health Education and Research Institute  

E-Print Network [OSTI]

! Light refreshments will be provided! FOR QUESTIONS AND TO PRE-REGISTER, PLEASE CALL HANNA AT 347 in accordance with the essentials and standards of the Accreditation Council for Continuing Medical Education continuing medical education for physicians. DISCLOSURE It is the policy of the CAMC Health Education

Mohaghegh, Shahab

464

Academia Sinica and The Scripps Research Institute Joint Conference on Chemical Biology Sciences  

E-Print Network [OSTI]

. Jeffery Kelly https://www.scripps.edu/research/faculty/kelly Chairman, Department of Molecular of viral coat protein mimics Lecturer 5 (14:00-14:45) Dr. Benjamin Cravatt https

465

Joint Hydraulic Institute/ASAP Letter of March 30th- Clarification of Point #2  

Broader source: Energy.gov [DOE]

We would like to clarify point #2 in the referenced letter, which addressed potential energy conservation standards for residential circulators.

466

Addressing the Need for Alternative Transportation Fuels: The Joint BioEnergy Institute  

E-Print Network [OSTI]

the U.S. As world demand increases, oil reserves may become2006) Trends in Oil Sup-ply and Demand, the Potential for

Blanch, Harvey

2010-01-01T23:59:59.000Z

467

DATA QUALITY IN GENOME DATABASES (Research Paper)  

E-Print Network [OSTI]

DATA QUALITY IN GENOME DATABASES (Research Paper) Heiko Müller Humboldt University Berlin, Germany@dbis.informatik.hu-berlin.de Abstract: Genome databases store data about molecular biological entities such as genes, proteins, diseases is their importance in the process of drug discovery. Genome data is analyzed and interpreted to gain so-called leads

Weske, Mathias

468

Genome Biology 2005, 6:312 commentreviewsreportsdepositedresearchinteractionsinformationrefereedresearch  

E-Print Network [OSTI]

Genome Biology 2005, 6:312 commentreviewsreportsdepositedresearchinteractionsinformationrefereedresearch Meeting report Large-scale discovery and validation of functional elements in the human genome-mail: bbernst@fas.harvard.edu. Manolis Kellis. E-mail: manoli@mit.edu Published: 1 March 2005 Genome Biology

Kellis, Manolis

469

Genome Biology 2006, 7:320 commentreviewsreportsdepositedresearchinteractionsinformationrefereedresearch  

E-Print Network [OSTI]

Genome Biology 2006, 7:320 commentreviewsreportsdepositedresearchinteractionsinformationrefereedresearch Meeting report Mobile DNA: genomes under the influence Cédric Feschotte and Ellen J Pritham Feschotte. Email: cedric@uta.edu Published: 30 June 2006 Genome Biology 2006, 7:320 (doi:10.1186/gb-2006

Pritham, Ellen J.

470

Genome Biology 2004, 6:302 commentreviewsreportsdepositedresearchinteractionsinformationrefereedresearch  

E-Print Network [OSTI]

Genome Biology 2004, 6, Technologiepark 927, B-9052 Ghent, Belgium. E-mail: Yves.vandepeer@psb.ugent.be Published: 21 December 2004 Genome at http://genomebiology.com/2004/6/1/302 © 2004 BioMed Central Ltd A report on the Plant Genomics European

Gent, Universiteit

471

Inferring Ancestral Chloroplast Genomes with Inverted Repeat  

E-Print Network [OSTI]

Inferring Ancestral Chloroplast Genomes with Inverted Repeat Liying Cui # , Feng Yue + , Claude W 87131 Abstract--- Genome evolution is shaped not only by nucleotide substitutions, but also by structural changes including gene and genome duplications, inser­ tions/deletions and gene order

Tang, Jijun

472

Genome Biology 2007, 8:R34 commentreviewsreportsdepositedresearchrefereedresearchinteractionsinformation  

E-Print Network [OSTI]

Genome Biology 2007, 8:R34 analytics tool for genome assemblies Michael C Schatz*, Adam M Phillippy*, Ben Shneiderman and Steven L the original work is properly cited. Hawkeye: a visual analytics tool for genome assembliesHawkeye is a new

Shneiderman, Ben

473

Computational Approaches Towards Human Genome Annotation  

E-Print Network [OSTI]

Computational Approaches Towards Human Genome Annotation Mark Gerstein Molecular Biophysics of the human genome. My talk will be concerned with topics within this area, in particular annotating pseudogenes (protein fossils) in the genome. I will discuss a comprehensive pseudogene identification pipeline

Singh, Jaswinder Pal

474

Experimental genomics of fitness in yeast  

Science Journals Connector (OSTI)

...Review articles 1001 70 129 Experimental genomics of fitness in yeast Graham Bell * * graham...084533 ) Liti, G. , 2009 Population genomics of domestic and wild yeasts. Nature...1126/science.1091317 ) Experimental genomics of fitness in yeast. | The set of single-gene...

2010-01-01T23:59:59.000Z

475

Rice functional genomics research in China  

Science Journals Connector (OSTI)

...compiled by Zhu Chen Rice functional genomics research in China Bin Han 1 7 * Yongbiao...People's Republic of China Rice functional genomics is a scientific approach that seeks to...facilitated research in rice functional genomics in China. The Ministry of Science and...

2007-01-01T23:59:59.000Z

476

Pairwise Comparison Between Genomic Sequences and  

E-Print Network [OSTI]

COM­ BAT is applied to comparative analysis between yeast genomes, and between the human genomePairwise Comparison Between Genomic Sequences and Optical­maps by Bing Sun A dissertation submitted a research problem and the need of persistence to accomplish a goal. He introduced the CAPO project to me

Mohri, Mehryar

477

Pairwise Comparison Between Genomic Sequences and  

E-Print Network [OSTI]

. In experiments COM- BAT is applied to comparative analysis between yeast genomes, and between the human genomePairwise Comparison Between Genomic Sequences and Optical-maps by Bing Sun A dissertation submitted a research problem and the need of persistence to accomplish a goal. He introduced the CAPO project to me

Mohri, Mehryar

478

SCIENCE, POLITICS. AND THE HUMAN GENOM  

E-Print Network [OSTI]

/ Robert Cook-Deegan. p. cm. Includes bibliographical references. 1. Human Genome Project. 2. Human geneSCIENCE, POLITICS. AND THE HUMAN GENOM A scrupulous . . . narrative of the genesis and opening- DEEGAN #12;#12;#12;#12;The GENE WARS Science, Politics, and theHuman Genome ROBERT COOK-DEEGAN W - W

Richardson, David

479

Genomic Comparisons of Humans and Chimpanzees  

E-Print Network [OSTI]

Genomic Comparisons of Humans and Chimpanzees Ajit Varki1 and David L. Nelson2 1 Glycobiology to human evolution, development, and disease. Sequence differences from the human genome were confirmed in the sidebar Online Sources of Information Regarding the Chimpanzee Genome. At the outset, we also emphasize

480

Genomics-based drug discovery venture  

Science Journals Connector (OSTI)

Genomics-based drug discovery venture ... The Cambridge, Mass.-based company calls its DiscoverEase program "functional genomics"—designed to isolate and rapidly determine not only genes but also the related functions of critical proteins. ... Other genomics programs sequence vast amounts of human genetic information. ...

ANN THAYER

1996-10-07T23:59:59.000Z

Note: This page contains sample records for the topic "joint genome institute" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


481

Genomics Rises To Drug Discovery Challenge  

Science Journals Connector (OSTI)

Genomics Rises To Drug Discovery Challenge ... Functional genomics and functional proteomics provide a set of powerful tools to help identify novel cellular targets ... With pharmaceutical companies and biotechnology firms always looking for ways to discover new medicines more quickly and more efficiently, they are increasingly turning to new genomics and proteomics technologies to speed things along. ...

STU BORMAN

1999-04-19T23:59:59.000Z

482

UNL Core for Applied Genomics and Ecology  

E-Print Network [OSTI]

UNL Core for Applied Genomics and Ecology Bioinformatics training Roche 454 GS-FLX Registration, Microbiomes, Variant Analysis, Whole Genomes, Transcriptomes Data Analysis and Statistics CAGE database and employer. University of Nebraska-Lincoln*Core for Applied Genomics and Ecology* 323 Filley Hall *Lincoln

Farritor, Shane

483

Bridging mycorrhizal genomics, metagenomics and forest ecology  

E-Print Network [OSTI]

Meetings Bridging mycorrhizal genomics, metagenomics and forest ecology 6th New Phytologist of easily cultured saprotrophic fungi (among the first three published genomes were the models Saccharomyces or biotechnological interest, genomics is now poised to rapidly permeate the fields of fungal ecology and evolution

Pringle, Anne

484

One day seminar: Genetics and Genomics of  

E-Print Network [OSTI]

SCHOOL OF MEDICINE One day seminar: Genetics and Genomics of Infectious Diseases Malaria and TB 14th June 2013 University of St Andrews - School of Medicine Pathogen genome research allows exquisite to understanding disease progression. Pathogen genome sequencing is accessible to most. Outputs have broad

Brierley, Andrew

485

Fraud strikes top genome lab  

SciTech Connect (OSTI)

Francis Collins, head of NIH`s Human Genome Project has informed colleagues that a junior researcher in his lab facke data in five papers co-authored by Collins. This article describes the whole scenario, how it was discovered, and what the reprocussions are.

Marshall, E.

1996-11-08T23:59:59.000Z

486

Nuclear Organization and Genome Function  

E-Print Network [OSTI]

Nuclear Organization and Genome Function Kevin Van Bortle and Victor G. Corces Department-range interactions and have proposed roles in nuclear organization. In this review, we explore recent findings for the roles of insulators in nuclear organization. 163 Annu.Rev.CellDev.Biol.2012.28:163-187.Downloadedfromwww

Corces, Victor G.

487

DOE-WRI Jointly Sponsored Research Program on Energy-Related Topics  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Power Systems Power Systems Advanced Research ContaCts Kamalendu Das Project Manager Gasification and Combustion Projects Division National Energy Technology Laboratory 3610 Collins Ferry Road P.O. Box 880 Morgantown, WV 26507 304-285-4065 kamal.das@netl.doe.gov Robert R. Romanosky Technology Manager Advanced Research National Energy Technology Laboratory 3610 Collins Ferry Road P.O. Box 880 Morgantown, WV 26507 304-285-4721 robert.romanosky@netl.doe.gov Vijay K. sethi Western Research Institute 365 North 9th Street P.O. Box 3395 Laramie, WY 82072-3380 307-721-2376 vsethi@uwyo.edu http://wri.uwyo.edu/ DOE-WRI JOIntly SpOnSORED RESEaRch pROgRam On EnERgy-RElatED tOpIcS Description For over two decades, the University of Wyoming Research Corporation - doing business as the Western Research Institute (WRI) - has been supporting the

488

List of all HEP Institutions  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Top 500 Top 500 HEP and Astrophysics Institutions by Country This document lists the 500 major high-energy physics and astrophysics institutions, sorted by country. Each listing will show a [SPIRES Entry] which gives the full address and phone/fax/url of the institution in addition to links to papers in HEP and people in HEPNAMES. The [Home page], where known, takes you directly to the departmental home page. Alternatively try our INSTITUTIONS search page. This list of the top 500 institutions is chosen by the number of papers from each institution in the past 5 years. Click here for the full list of HEP institutions. Please send any comments, corrections, updates or information on new institutions to: inst@slac.stanford.edu. Last modified at 17:12:32 on 06/30/04.

489

BEEKEEPING INSTITUTE Young Harris College  

E-Print Network [OSTI]

2008 BEEKEEPING INSTITUTE May 15-17 Young Harris College Young Harris, Georgia #12;Young Harris, section comb honey, mead, and beekeeping gadgets. We urge students to participate in the Institute Honey

Delaplane, Keith S.

490

Nitrogen fixation island and rhizosphere competence traits in the genome of root-associated Pseudomonas stutzeri A1501  

Science Journals Connector (OSTI)

...Yuetan Dou Ming Chen Shuzhen Ping Junping Peng Wei Lu Wei Zhang...Claudine Elmerich Min Lin Qi Jin *Biotechnology Research Institute...Microbiol 4 : 824 – 841 . 29 Xi J ( 2000 ) Hyperproduction of polyesters consisting...USA 103 : 9584 – 9589 . 43 Jin Q ( 2002 ) Genome sequence of...

Yongliang Yan; Jian Yang; Yuetan Dou; Ming Chen; Shuzhen Ping; Junping Peng; Wei Lu; Wei Zhang; Ziying Yao; Hongquan Li; Wei Liu; Sheng He; Lizhao Geng; Xiaobing Zhang; Fan Yang; Haiying Yu; Yuhua Zhan; Danhua Li; Zhanglin Lin; Yiping Wang; Claudine Elmerich; Min Lin; Qi Jin

2008-01-01T23:59:59.000Z

491

Lawrence Livermore and Rensselaer Polytechnic Institute scientists set a  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

6 6 For immediate release: 04/30/2013 | NR-13-04-06 Lawrence Livermore and Rensselaer Polytechnic Institute scientists set a new simulation speed record on the Sequoia supercomputer Donald B Johnston, LLNL, (925) 423-4902, johnston19@llnl.gov Printer-friendly Lawrence Livermore scientists, from left, David Jefferson and Peter Barnes. Photo by Laura Schulz and Meg Epperly/LLNL High Resolution Image Computer scientists at Lawrence Livermore National Laboratory (LLNL) and Rensselaer Polytechnic Institute have set a high performance computing speed record that opens the way to the scientific exploration of complex planetary-scale systems. In a paper to be published in May, the joint team will announce a record-breaking simulation speed of 504 billion events per second on LLNL's

492

U.S.-Sweden Joint PHEV Research  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

to jointly develop new plug-in to jointly develop new plug-in hybrid vehicle (PHEV) technology and accelerate its consumer acceptance and commercialization, the U.S. Department of Energy (DOE) and Sweden signed a Memorandum of Understanding (MOU) in July for a one year, $1 million cost-sharing agreement to be equally funded by DOE and the Swedish Energy Agency. Through contacts developed over many years conducting international technology assessment for the Department of Energy, Argonne National Laboratory initiated the MOU, which was signed by DOE Assistant Secretary Alexander Karsner and Director General of the Swedish Energy Agency Tomas KÃ¥berger, on the Swedish island of Gotland. The ceremony included comments by Swedish Deputy Prime Minister Maud Olofsson and U.S. Ambassador to Sweden Michael

493

Ten Years Later: A Joint Library Evolves  

Science Journals Connector (OSTI)

Abstract In 2003, a unique joint library was created. A partnership between the San Jose Public Library system and San Jose State University, the Dr. Martin Luther King, Jr. Library serves a city population of more than a million and a campus population of over 30,000 students. With different patrons and different missions, bringing the two library cultures and functions together presented many challenges, but the library today is a vital, innovative space for learning. In the ten years since its opening, however, the cost savings envisioned when the library was created have not been realized. Also, the partnership originally presented in the library's organizational structure has undergone alterations. This restructuring was driven by changes in funding, staffing, and patron needs. Despite this organizational evolution, the King Library still provides a richer resource to its communities than either partner could have provided alone and can serve as a model to other communities considering the creation of a joint library.

Ann Agee

2014-01-01T23:59:59.000Z

494

Joint Outreach Task Group (JOTG) Calendar: June  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Former Worker Program (FWP) Home Covered Sites/Populations › Construction Worker Screening Projects › Production Worker Screening Projects › Supplemental Screening Program › Beryllium Vendor Screening Program Upcoming Events Program Implementation Outreach Medical Screening - Conventional Medical Screening - Early Lung Cancer Detection Communicating Results Protecting Participant Information Sharing De-identified Data Chronic Beryllium Disease Awareness Joint Outreach Task Group (JOTG) Worker Testimonials Contact Us FWP Scientific Publications FWP Documents Related Links Office of Health and Safety Home Page HSS Logo Joint Outreach Task Group Calendar: June 2013 Sunday Monday Tuesday Wednesday Thursday Friday Saturday 26 27 28 29 30 31 1 2 3 4 FWP Event Mound Miamisburg, OH

495

Pipeline safety joint eliminates need for divers  

SciTech Connect (OSTI)

The Sea-Hook coupling is a diverless pressure-compensated pipeline safety joint designed to protect the pipe from damage by excessive physical loads. The coupling provides a predetermined weak point in the line that will cause a controlled separation when the line is exposed to strong wave action or dragging anchors. Moreover, it offers prepressurized remote lockout protection, metal seal integrity, no hand-up separation, enclosed bolting, optimal manual lockout, and no springs or shear rings.

Not Available

1983-04-01T23:59:59.000Z

496

The ecoresponsive genome of Daphnia pulex  

SciTech Connect (OSTI)

This document provides supporting material related to the sequencing of the ecoresponsive genome of Daphnia pulex. This material includes information on materials and methods and supporting text, as well as supplemental figures, tables, and references. The coverage of materials and methods addresses genome sequence, assembly, and mapping to chromosomes, gene inventory, attributes of a compact genome, the origin and preservation of Daphnia pulex genes, implications of Daphnia's genome structure, evolutionary diversification of duplicated genes, functional significance of expanded gene families, and ecoresponsive genes. Supporting text covers chromosome studies, gene homology among Daphnia genomes, micro-RNA and transposable elements and the 46 Daphnia pulex opsins. 36 figures, 50 tables, 183 references.

Colbourne, John K.; Pfrender, Michael E.; Gilbert, Donald; Thomas, W. Kelley; Tucker, Abraham; Oakley, Todd H.; Tokishita, Shinichi; Aerts, Andrea; Arnold, Georg J.; Basu, Malay Kumar; Bauer, Darren J.; Caceres, Carla E.; Carmel, Liran; Casola, Claudio; Choi, Jeong-Hyeon; Detter, John C.; Dong, Qunfeng; Dusheyko, Serge; Eads, Brian D.; Frohlich, Thomas; Geiler-Samerotte, Kerry A.; Gerlach, Daniel; Hatcher, Phil; Jogdeo, Sanjuro; Krijgsveld, Jeroen; Kriventseva, Evgenia V; Kültz, Dietmar; Laforsch, Christian; Lindquist, Erika; Lopez, Jacqueline; Manak, Robert; Muller, Jean; Pangilinan, Jasmyn; Patwardhan, Rupali P.; Pitluck, Samuel; Pritham, Ellen J.; Rechtsteiner, Andreas; Rho, Mina; Rogozin, Igor B.; Sakarya, Onur; Salamov, Asaf; Schaack, Sarah; Shapiro, Harris; Shiga, Yasuhiro; Skalitzky, Courtney; Smith, Zachary; Souvorov, Alexander; Sung, Way; Tang, Zuojian; Tsuchiya, Dai; Tu, Hank; Vos, Harmjan; Wang, Mei; Wolf, Yuri I.; Yamagata, Hideo; Yamada, Takuji; Ye, Yuzhen; Shaw, Joseph R.; Andrews, Justen; Crease, Teresa J.; Tang, Haixu; Lucas, Susan M.; Robertson, Hugh M.; Bork, Peer; Koonin, Eugene V.; Zdobnov, Evgeny M.; Grigoriev, Igor V.; Lynch, Michael; Boore, Jeffrey L.

2011-02-04T23:59:59.000Z

497

PRITZKER INSTITUTE FOR BIOMEDICAL SCIENCE  

E-Print Network [OSTI]

PRITZKER INSTITUTE FOR BIOMEDICAL SCIENCE AND ENGINEERING Strategic Plan Summary #12;Pritzker Institute for Biomedical Science and Engineering for Strategic Plan Summary | 1 PRITZKER INSTITUTE FOR BIOMEDICAL SCIENCE AND ENGINEERING STRATEGIC PLAN SUMMARY 1. Grow the student body · Provide financial

Heller, Barbara

498

Development of stable lines of transgenic zebrafish (Danio rerio) to investigate genomic instability  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

stable lines of transgenic zebrafish (Danio rerio) to stable lines of transgenic zebrafish (Danio rerio) to investigate genomic instability Lahcen Jaafar 1 , Wendy W. Kuhne 2 , Xiayang Xie 3 , Xuan Zheng 1,4 , Jeffrey S. Mumm 3 , and William S. Dynan 1 1 Institute of Molecular Medicine and Genetics, Georgia Health Sciences University, Georgia 30912, USA, 2 Savannah River National Laboratory, Aiken SC 29808, 3 Department of Cellular Biology and Anatomy, Georgia Health Sciences University, Georgia 30912, USA, 4 Genetic Diagnosis Center, Zhongnan Hospital of Wuhan University, Wuhan, China The goal of our project is to investigate low-dose radiation induced-genomic instability. We describe the development of a whole-vertebrate model bearing a reporter transgene that is designed to indicate the presence of genome instability by somatic homologous

499

Insights from Human/Mouse genome comparisons  

SciTech Connect (OSTI)

Large-scale public genomic sequencing efforts have provided a wealth of vertebrate sequence data poised to provide insights into mammalian biology. These include deep genomic sequence coverage of human, mouse, rat, zebrafish, and two pufferfish (Fugu rubripes and Tetraodon nigroviridis) (Aparicio et al. 2002; Lander et al. 2001; Venter et al. 2001; Waterston et al. 2002). In addition, a high-priority has been placed on determining the genomic sequence of chimpanzee, dog, cow, frog, and chicken (Boguski 2002). While only recently available, whole genome sequence data have provided the unique opportunity to globally compare complete genome contents. Furthermore, the shared evolutionary ancestry of vertebrate species has allowed the development of comparative genomic approaches to identify ancient conserved sequences with functionality. Accordingly, this review focuses on the initial comparison of available mammalian genomes and describes various insights derived from such analysis.

Pennacchio, Len A.

2003-03-30T23:59:59.000Z

500

Form:Research Institution | Open Energy Information  

Open Energy Info (EERE)

Institution Jump to: navigation, search Add a Research or Development Institution Input your research or development institution name below to add to the registry. If your research...