Sample records for genome institute climate

  1. Joint Genome Institute's Automation Approach and History

    E-Print Network [OSTI]

    Roberts, Simon

    2006-01-01T23:59:59.000Z

    Joint Genome Institute’s Automation Approach and Historythroughput environment; – automation does not necessarilyissues “Islands of Automation” – modular instruments with

  2. Climate Change Science Institute | Clean Energy | ORNL

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Climate Change Science Institute SHARE Climate Change Science Institute To advance understanding of the Earth system, describe the consequences of climate change, and evaluate and...

  3. Genomics of Climate Resilience (2013 DOE JGI Genomics of Energy and Environment 8th Annual User Meeting)

    SciTech Connect (OSTI)

    Bermingham, Eldredge [STRI-Panama

    2013-03-27T23:59:59.000Z

    Eldredge Bermingham of the Smithsonian Tropical Research Institute-Panama on "Genomics of climate resilience" at the 8th Annual Genomics of Energy & Environment Meeting on March 27, 2013 in Walnut Creek, Calif.

  4. Institute for Plant Genomics and Biotechnology GENOMICS AND BIOTECHNOLOGY

    E-Print Network [OSTI]

    Institute for Plant Genomics and Biotechnology GENOMICS AND BIOTECHNOLOGY A multidisciplinary organization, the Institute for Plant Genomics and Biotechnology is a composed of faculty members representing projects at the Institute for Plant Genomics and Biotechnology include the development of transgenic plants

  5. Microbial Genomics Data from the DOE Joint Genome Institute (JGI)

    DOE Data Explorer [Office of Scientific and Technical Information (OSTI)]

    As of March 2008, The Joint Genome Institute has released 296 Prokaryotic microbial sites, with 216 in finished status.

  6. Joint Genome Institute's Automation Approach and History

    SciTech Connect (OSTI)

    Roberts, Simon

    2006-07-05T23:59:59.000Z

    Department of Energy/Joint Genome Institute (DOE/JGI) collaborates with DOE national laboratories and community users, to advance genome science in support of the DOE missions of clean bio-energy, carbon cycling, and bioremediation.

  7. A Taste of Algal Genomes from the Joint Genome Institute

    SciTech Connect (OSTI)

    Kuo, Alan; Grigoriev, Igor

    2012-06-17T23:59:59.000Z

    Algae play profound roles in aquatic food chains and the carbon cycle, can impose health and economic costs through toxic blooms, provide models for the study of symbiosis, photosynthesis, and eukaryotic evolution, and are candidate sources for bio-fuels; all of these research areas are part of the mission of DOE's Joint Genome Institute (JGI). To date JGI has sequenced, assembled, annotated, and released to the public the genomes of 18 species and strains of algae, sampling almost all of the major clades of photosynthetic eukaryotes. With more algal genomes currently undergoing analysis, JGI continues its commitment to driving forward basic and applied algal science. Among these ongoing projects are the pan-genome of the dominant coccolithophore Emiliania huxleyi, the interrelationships between the 4 genomes in the nucleomorph-containing Bigelowiella natans and Guillardia theta, and the search for symbiosis genes of lichens.

  8. is a Bioinformatics Scientist at the Institute for Genomic

    E-Print Network [OSTI]

    Salzberg, Steven

    Mihai Pop is a Bioinformatics Scientist at the Institute for Genomic Research. He earned his PhD in Computer Science from Johns Hopkins University in 2000. His research interests include genome assembly and comparative genomics. Adam Phillippy is a Bioinformatics Software Engineer at The Institute for Genomic

  9. Joint Genome Institute (JGI) Projects at NERSC

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative1 First Use of Energy for All Purposes (Fuel and Nonfuel), 2002; Level: National5Sales for4,645U.S. DOE Office of Science (SC)Integrated Codes |Is Your Home as Ready for(SC)Joint Genome Institute (JGI) Joint

  10. Joint Genome Institute Progress Report 2002-2005

    SciTech Connect (OSTI)

    Gilbert, David

    2005-10-03T23:59:59.000Z

    Progress report covering activities at the DOE-Joint Genome Institute in Walnut Creek, California for the period 2002-2005.

  11. Eukaryotic Genomics Data from the DOE Joint Genome Institute (JGI)

    DOE Data Explorer [Office of Scientific and Technical Information (OSTI)]

    From the JGI webportal users can choose Eukaryotic genomes from a photo list, access the JGI FTP directories to download data files, use the Tree of Life navigation tool, or choose a genome and go directly to a website specific to that one genome. The individual sites include direct access to download sequence files, BLAST, search, view and navigate the genomic annotations.

  12. DOE Joint Genome Institute 2008 Progress Report

    SciTech Connect (OSTI)

    Gilbert, David

    2009-03-12T23:59:59.000Z

    While initially a virtual institute, the driving force behind the creation of the DOE Joint Genome Institute in Walnut Creek, California in the Fall of 1999 was the Department of Energy's commitment to sequencing the human genome. With the publication in 2004 of a trio of manuscripts describing the finished 'DOE Human Chromosomes', the Institute successfully completed its human genome mission. In the time between the creation of the Department of Energy Joint Genome Institute (DOE JGI) and completion of the Human Genome Project, sequencing and its role in biology spread to fields extending far beyond what could be imagined when the Human Genome Project first began. Accordingly, the targets of the DOE JGI's sequencing activities changed, moving from a single human genome to the genomes of large numbers of microbes, plants, and other organisms, and the community of users of DOE JGI data similarly expanded and diversified. Transitioning into operating as a user facility, the DOE JGI modeled itself after other DOE user facilities, such as synchrotron light sources and supercomputer facilities, empowering the science of large numbers of investigators working in areas of relevance to energy and the environment. The JGI's approach to being a user facility is based on the concept that by focusing state-of-the-art sequencing and analysis capabilities on the best peer-reviewed ideas drawn from a broad community of scientists, the DOE JGI will effectively encourage creative approaches to DOE mission areas and produce important science. This clearly has occurred, only partially reflected in the fact that the DOE JGI has played a major role in more than 45 papers published in just the past three years alone in Nature and Science. The involvement of a large and engaged community of users working on important problems has helped maximize the impact of JGI science. A seismic technological change is presently underway at the JGI. The Sanger capillary-based sequencing process that dominated how sequencing was done in the last decade is being replaced by a variety of new processes and sequencing instruments. The JGI, with an increasing number of next-generation sequencers, whose throughput is 100- to 1,000-fold greater than the Sanger capillary-based sequencers, is increasingly focused in new directions on projects of scale and complexity not previously attempted. These new directions for the JGI come, in part, from the 2008 National Research Council report on the goals of the National Plant Genome Initiative as well as the 2007 National Research Council report on the New Science of Metagenomics. Both reports outline a crucial need for systematic large-scale surveys of the plant and microbial components of the biosphere as well as an increasing need for large-scale analysis capabilities to meet the challenge of converting sequence data into knowledge. The JGI is extensively discussed in both reports as vital to progress in these fields of major national interest. JGI's future plan for plants and microbes includes a systematic approach for investigation of these organisms at a scale requiring the special capabilities of the JGI to generate, manage, and analyze the datasets. JGI will generate and provide not only community access to these plant and microbial datasets, but also the tools for analyzing them. These activities will produce essential knowledge that will be needed if we are to be able to respond to the world's energy and environmental challenges. As the JGI Plant and Microbial programs advance, the JGI as a user facility is also evolving. The Institute has been highly successful in bending its technical and analytical skills to help users solve large complex problems of major importance, and that effort will continue unabated. The JGI will increasingly move from a central focus on 'one-off' user projects coming from small user communities to much larger scale projects driven by systematic and problem-focused approaches to selection of sequencing targets. Entire communities of scientists working in a particular field, such as feeds

  13. Genome Rearrangement and Planning Institute of Information Systems

    E-Print Network [OSTI]

    Erdem, Esra

    Genome Rearrangement and Planning Esra Erdem Institute of Information Systems Vienna University Avenue, Toronto, Canada e.tillier@utoronto.ca Abstract The genome rearrangement problem is to find the most eco­ nomical explanation for observed differences between the gene orders of two genomes

  14. Climate and Institutional Change ADVANCE efforts to improve

    E-Print Network [OSTI]

    Sheridan, Jennifer

    #12;Climate and Institutional Change ADVANCE efforts to improve departmental climate #12;Why Climate? Recruitment--women more likely to come to a department with good climate Retention--women faculty more likely to stay in a department with good climate Advancement--women more likely to be promoted

  15. Climate Change Science Institute at Oak Ridge National Laboratory

    E-Print Network [OSTI]

    Climate Change Science Institute at Oak Ridge National Laboratory A multidisciplinary research the consequences of climate change, and evaluate and inform policy responses to climate change Highlights of CCSI research include · Participation in the Intergovernmental Panel on Climate Change Fifth Assessment Report

  16. Genomics at the Ontario Institute for Cancer Research

    SciTech Connect (OSTI)

    Ali, Johar [Ontario Institute for Cancer Research

    2010-06-02T23:59:59.000Z

    Johar Ali of the Ontario Institute for Cancer Research discusses genomics and next-gen applications at the OICR on June 2, 2010 at the "Sequencing, Finishing, Analysis in the Future" meeting in Santa Fe, NM

  17. Centerfor Genome Bas Max Planck Institute for Molecular Genetics

    E-Print Network [OSTI]

    Spang, Rainer

    Be rlin Centerfor Genome Bas ed Bioinform a tics Max Planck Institute for Molecular Genetics109/209 and 01GR0455 of the German Federal Ministry of Education and Research. In addition X

  18. Centerfor Genome Bas Max Planck Institute for Molecular Genetics

    E-Print Network [OSTI]

    Spang, Rainer

    Be rlin Centerfor Genome Bas ed Bioinform a tics Max Planck Institute for Molecular Genetics of Education. 2 #12;Chapter 2 Implemented functions 2.1 twilight.pval: Testing effect sizes twilight

  19. DOE Joint Genome Institute 2008 Progress Report

    E-Print Network [OSTI]

    Gilbert, David

    2009-01-01T23:59:59.000Z

    Genomics of cellulosic biofuels. Nature, 454 (7206):841-845,2008 Termite Bellies and Biofuels (Published in Smithsonian,in the quest for viable biofuels. An estimated 10,000 marine

  20. Climate Change Institute director wants to increase information...

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Fred Strohl Communications 865.574.4165 Climate Change Science Institute director wants to increase information Jack Fellows Jack Fellows (hi-res image) Listen to the audio OAK...

  1. Pastoral Institutions, Organizations & Resilience to Climate Change

    E-Print Network [OSTI]

    within these limits? 3. What are the institutions that permit, facilitate or enforce these practices? #12

  2. A Preliminary Proposal UWM Climate Change and Sustainable Development Institute

    E-Print Network [OSTI]

    Saldin, Dilano

    . As these examples illustrate, the effects of global warming/climate change are wide-ranging, frightening, and continuing, which point to the critical need to understand human impact on climate change and what needs in issues associated with global warming can help address these complex issues. Institute Overview: Over

  3. Integrated Microbial Genomes (IMG) System from the DOE Joint Genome Institute (JGI)

    DOE Data Explorer [Office of Scientific and Technical Information (OSTI)]

    The integrated microbial genomes (IMG) system is a data management, analysis and annotation platform for all publicly available genomes. IMG contains both draft and complete JGI microbial genomes integrated with all other publicly available genomes from all three domains of life, together with a large number of plasmids and viruses. IMG provides tools and viewers for analyzing and annotating genomes, genes and functions, individually or in a comparative context. Since its first release in 2005, IMG's data content and analytical capabilities have been constantly expanded through quarterly releases. IMG is provided by the DOE-Joint Genome Institute (JGI) and is available from http://img.jgi.doe.gov. [Abstract from The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions; Victor M. Markowitz, Ernest Szeto, Krishna Palaniappan, Yuri Grechkin, Ken Chu, I-Min A. Chen, Inna Dubchak, Iain Anderson, Athanasios Lykidis, Konstantinos Mavromatis, Natalia N. Ivanova and Nikos C. Kyrpides; Nucleic Acids Research, 2008, Vol. 36. (Database Issue) See also the companion system, Integrated Microbial Genomes with Microbiome Samples.

  4. Climate Change Science Institute | Clean Energy | ORNL

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative1 First Use of Energy for All Purposes (Fuel and Nonfuel), 2002; Level: National5Sales for4,645U.S. DOE Office511041clothAdvanced Materials Advanced. C o w l i t zManufacturing: U.S.Climate Action PlanClimate Change

  5. ANNUAL REPORT Pacific Institute for Climate Solutions

    E-Print Network [OSTI]

    Pedersen, Tom

    for Climate Solutions gratefully acknowledges the generous endowment provided by the Province of British Columbia through the Ministry of Environment in 2008.This funding is enabling ongoing independent research achieving a vibrant low carbon economy. Mission To partner with governments, the private sector, other

  6. Climate Change Science Institute | Clean Energy | ORNL

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative1 First Use of Energy for All Purposes (Fuel and Nonfuel), 2002; Level: National5Sales for4,645U.S. DOE Office511041clothAdvanced Materials Advanced. C o w l i t zManufacturing: U.S.Climate Action Plan

  7. The Challenges and Opportunities for Extending Plant Genomics to Climate (2013 DOE JGI Genomics of Energy and Environment 8th Annual User Meeting)

    SciTech Connect (OSTI)

    Weston, David [ORNL

    2013-03-01T23:59:59.000Z

    David Weston of Oak Ridge National Laboratory on "The challenges and opportunities for extending plant genomics to climate" at the 8th Annual Genomics of Energy & Environment Meeting on March 27, 2013 in Walnut Creek, Calif.

  8. FACILITIES and EQUIPMENT DESCRIPTION The UCR Institute for Integrative Genome Biology

    E-Print Network [OSTI]

    Lyubomirsky, Ilya

    1 FACILITIES and EQUIPMENT DESCRIPTION The UCR Institute for Integrative Genome Biology interdisciplinary, four-story Genomics Building in 2009 to accommodate over 200 faculty members, graduate students one roof who use modern genetic tools, genomics and bioinformatics to help address basic and applied

  9. The Scientific Foundation for Personal Genomics: Recommendations from a National Institutes of

    E-Print Network [OSTI]

    Church, George M.

    The Scientific Foundation for Personal Genomics: Recommendations from a National Institutes of personal genomic tests has led to discussions about the validity and utility of such tests and the balance and the Centers for Disease Control and Prevention to review the scientific foundation for using personal genom

  10. Erica Crawford (Pacific Institute for Climate Solutions and BC Agriculture & Food Climate Action Initiative) and Rachelle Beveridge (PhD Candidate University of Victoria)

    E-Print Network [OSTI]

    Pedersen, Tom

    's Agriculture Sector in the Face of Climate Change #12;PACIFIC INSTITUTE FOR CLIMATE SOLUTIONS University ofErica Crawford (Pacific Institute for Climate Solutions and BC Agriculture & Food Climate Action is enabling ongoing independent research aimed at developing innovative climate change solutions

  11. Climate Models from the Joint Global Change Research Institute

    DOE Data Explorer [Office of Scientific and Technical Information (OSTI)]

    Staff at the Joint Institute develop and use models to simulate the economic and physical impacts of global change policy options. The GCAM, for example, gives analysts insight into how regional and national economies might respond to climate change mitigation policies including carbon taxes, carbon trading, and accelerated deployment of energy technology. Three available models are Phoenix, GCAM, and EPIC. Phoenix is a global, dynamic recursive, computable general equilibrium model that is solved in five-year time steps from 2005 through 2100 and divides the world into twenty-four regions. Each region includes twenty-six industrial sectors. Particular attention is paid to energy production in Phoenix. There are nine electricity-generating technologies (coal, natural gas, oil, biomass, nuclear, hydro, wind, solar, and geothermal) and four additional energy commodities: crude oil, refined oil products, coal, and natural gas. Phoenix is designed to answer economic questions related to international climate and energy policy and international trade. Phoenix replaces the Second Generation Model (SGM) that was formerly used for general equilibrium analysis at JGCRI. GCAM is the Global Change Assessment Model, a partial equilibrium model of the world with 14 regions. GCAM operates in 5 year time steps from 1990 to 2095 and is designed to examine long-term changes in the coupled energy, agriculture/land-use, and climate system. GCAM includes a 151-region agriculture land-use module and a reduced form carbon cycle and climate module in addition to its incorporation of demographics, resources, energy production and consumption. The model has been used extensively in a number of assessment and modeling activities such as the Energy Modeling Forum (EMF), the U.S. Climate Change Technology Program, and the U.S. Climate Change Science Program and IPCC assessment reports. GCAM is now freely available as a community model. The Environmental Policy Integrated Climate (EPIC) Model is a process-based agricultural systems model composed of simulation components for weather, hydrology, nutrient cycling, pesticide fate, tillage, crop growth, soil erosion, crop and soil management and economics. Staff at PNNL have been involved in the development of this model by integrating new sub-models for soil carbon dynamics and nitrogen cycling.

  12. Rooted in Wonder: Joint Genome Institute Study Reveals Amazing...

    Office of Environmental Management (EM)

    Addthis Related Articles USDA and DOE to Coordinate Research of Plant and Microbial Genomics Pokeberries Provide Boost for Solar Cells Scientists at Pacific Northwest National...

  13. 2012 U.S. Department of Energy: Joint Genome Institute: Progress Report

    SciTech Connect (OSTI)

    Gilbert, David [DOE JGI Public Affairs Manager] [DOE JGI Public Affairs Manager

    2013-01-01T23:59:59.000Z

    The mission of the U.S. Department of Energy Joint Genome Institute (DOE JGI) is to serve the diverse scientific community as a user facility, enabling the application of large-scale genomics and analysis of plants, microbes, and communities of microbes to address the DOE mission goals in bioenergy and the environment. The DOE JGI's sequencing efforts fall under the Eukaryote Super Program, which includes the Plant and Fungal Genomics Programs; and the Prokaryote Super Program, which includes the Microbial Genomics and Metagenomics Programs. In 2012, several projects made news for their contributions to energy and environment research.

  14. Dr. Michael MacCracken, Climate Institute, Washington, DC

    ScienceCinema (OSTI)

    Dr. Michael MacCracken

    2010-01-08T23:59:59.000Z

    Achieving International Agreement and Climate Protection by Coordinated Mitigation of Short- and Long-Lived Greenhouse Gases. Presented at the China-US Workshop on the "Climate-Energy Nexus" at Oak Ridge National Laboratory on November 11, 2009.

  15. Multi-institutional project to study climate change's effect...

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    storage from the atmosphere (the carbon sink) may already be declining in response to climate change-induced reductions in precipitation and increases in temperature." Because...

  16. Walker Institute for Climate System Research Research Highlights

    E-Print Network [OSTI]

    Lucarini, Valerio

    Director's outlook 3 About us 4 Impacts and consequences A changing climate for Africa 6 Renewable energy Reflecting the Sun's energy to cool the planet 36 Our people 38 #12;3 Director's outlook I am very pleased and you can see a selection of our research here. The recent UK Climate Change Risk Assessment and the UN

  17. Development of Structural Neurobiology and Genomics Programs in the Neurogenetic Institute

    SciTech Connect (OSTI)

    Henderson, Brian E., M.D.

    2006-11-10T23:59:59.000Z

    The purpose of the DOE equipment-only grant was to purchase instrumentation in support of structural biology and genomics core facilities in the Zilkha Neurogenetic Institute (ZNI). The ZNI, a new laboratory facility (125,000 GSF) and a center of excellence at the Keck School of Medicine of USC, was opened in 2003. The goal of the ZNI is to recruit upwards of 30 new faculty investigators engaged in interdisciplinary research programs that will add breadth and depth to existing school strengths in neuroscience, epidemiology and genetics. Many of these faculty, and other faculty researchers at the Keck School will access structural biology and genomics facilities developed in the ZNI.

  18. Walker Institute for Climate System Research Research Highlights

    E-Print Network [OSTI]

    Lucarini, Valerio

    . The UK act calls for national risk assessments and for bodies such as water and energy utilities Director's outlook 3 About us 4 Understanding 7 African rainfall 8 Climate variability and change;3 Director's outlook Welcome to our first issue of Research Highlights. This publication gives you

  19. INCT FOR CLIMATE CHANGE | 2009.2010 | ACTIVITY REPORT | BRAzIL National Institute of Science and

    E-Print Network [OSTI]

    1 INCT FOR CLIMATE CHANGE | 2009.2010 | ACTIVITY REPORT | BRAzIL National Institute of Science and Technology for Climate Change December 2010 ISSN 2179-5754 #12;2 Overall coordination Carlos Programa FAPESP de Pesquisa sobre Mudanças Climáticas Globais Executive Board of INCT for Climate Change

  20. Director-General, The Energy and Resources Institute Chairman, Intergovernmental Panel on Climate Change

    E-Print Network [OSTI]

    Painter, Kevin

    locations diversify raw material sources, especially agricultural or forestry inputs. Industry is alsoDirector-General, The Energy and Resources Institute Chairman, Intergovernmental Panel on Climate extremes can be felt locally or regionally 5 "Mongolian herdsmen face starvation"AGRICULTURE "Heatwave hits

  1. Ethiopia-Strategic Climate Institutions Programme (SCIP) | Open Energy

    Open Energy Info (EERE)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative Fuels Data Center Home Page onYou are now leaving Energy.gov You are now leaving Energy.gov You are being directedAnnualPropertyd8c-a9ae-f8521cbb8489 No revision|LLCInsulationInformation Institutions Programme

  2. Genomics, Gene Expression and Other Studies in Soybean Rust

    E-Print Network [OSTI]

    Posada-Buitrago, Martha Lucia

    2005-01-01T23:59:59.000Z

    Joint Genome Institute Genomics, Gene Expression and otherRust Martha Lucía Posada-Buitrago Ph.D Genomics DivisionEvolutionary Genomics DOE- Joint Genome Institute Lawrence

  3. MIDWESTERN REGIONAL CENTER OF THE DOE NATIONAL INSTITUTE FOR CLIMATIC CHANGE RESEARCH

    SciTech Connect (OSTI)

    Burton, Andrew J. [Michigan Technological University

    2014-02-28T23:59:59.000Z

    The goal of NICCR (National Institute for Climatic Change Research) was to mobilize university researchers, from all regions of the country, in support of the climatic change research objectives of DOE/BER. The NICCR Midwestern Regional Center (MRC) supported work in the following states: North Dakota, South Dakota, Nebraska, Kansas, Oklahoma, Minnesota, Iowa, Missouri, Wisconsin, Illinois, Michigan, Indiana, and Ohio. The MRC of NICCR was able to support nearly $8 million in climatic change research, including $6,671,303 for twenty projects solicited and selected by the MRC over five requests for proposals (RFPs) and $1,051,666 for the final year of ten projects from the discontinued DOE NIGEC (National Institute for Global Environmental Change) program. The projects selected and funded by the MRC resulted in 135 peer-reviewed publications and supported the training of 25 PhD students and 23 Masters students. Another 36 publications were generated by the final year of continuing NIGEC projects supported by the MRC. The projects funded by the MRC used a variety of approaches to answer questions relevant to the DOE’s climate change research program. These included experiments that manipulated temperature, moisture and other global change factors; studies that sought to understand how the distribution of species and ecosystems might change under future climates; studies that used measurements and modeling to examine current ecosystem fluxes of energy and mass and those that would exist under future conditions; and studies that synthesized existing data sets to improve our understanding of the effects of climatic change on terrestrial ecosystems. In all of these efforts, the MRC specifically sought to identify and quantify responses of terrestrial ecosystems that were not well understood or not well modeled by current efforts. The MRC also sought to better understand and model important feedbacks between terrestrial ecosystems, atmospheric chemistry, and regional and global climate systems. The broad variety of projects the MRC has supported gave us a unique opportunity to greatly improve our ability to predict the future health, composition and function of important agricultural and natural terrestrial ecosystems within the Midwestern Region.

  4. Bridging the Divide: Linking Genomics to Ecosystem Responses to Climate Change: Final Report

    SciTech Connect (OSTI)

    Smith, Melinda D.

    2014-03-15T23:59:59.000Z

    Over the project period, we have addressed the following objectives: 1) assess the effects of altered precipitation patterns (i.e., increased variability in growing season precipitation) on genetic diversity of the dominant C4 grass species, Andropogon gerardii, and 2) experimentally assess the impacts of extreme climatic events (heat wave, drought) on responses of the dominant C4 grasses, A. gerardii and Sorghastrum nutans, and the consequences of these response for community and ecosystem structure and function. Below is a summary of how we have addressed these objectives. Objective 1 After ten years of altered precipitation, we found the number of genotypes of A. gerardii was significantly reduced compared to the ambient precipitation treatments (Avolio et al., 2013a). Although genotype number was reduced, the remaining genotypes were less related to one another indicating that the altered precipitation treatment was selecting for increasingly dissimilar genomes (based on mean pairwise Dice distance among individuals). For the four key genotypes that displayed differential abundances depending on the precipitation treatment (G1, G4, and G11 in the altered plots and G2 in the ambient plots), we identified phenotypic differences in the field that could account for ecological sorting (Avolio & Smith, 2013a). The three altered rainfall genotypes also have very different phenotypic traits in the greenhouse in response to different soil moisture availabilities (Avolio and Smith, 2013c). Two of the genotypes that increased in abundance in the altered precipitation plots had greater allocation to root biomass (G4 and G11), while G1 allocated more biomass aboveground. These phenotypic differences among genotypes suggests that changes in genotypic structure between the altered and the ambient treatments has likely occurred via niche differentiation, driven by changes in soil moisture dynamics (reduced mean, increased variability and changes in the depth distribution of soil moisture) under a more variable precipitation regime, rather than reduced population numbers (A. gerardii tiller densities did not differ between altered and ambient treatments; p = 0.505) or a priori differences in genotype richness (Avolio et al.2013a). This ecological sorting of genotypes, which accounts for 40% of all sampled individuals in the altered plots, is an important legacy of the press chronic climate changes in the RaMPs experiment. Objective 2 In May 2010, we established the Climate Extremes Experiment at the Konza Prairie Biological Station. For the experiment, a gradient of temperatures, ranging from ambient to extreme, were imposed in 2010 and 2011 as a mid-season heat wave under well-watered or severe drought conditions. This study allowed us for the first time to examine species-specific thresholds of responses to climate extremes and assess how these phenotypic responses may impact selection of particular genotypes, with the ultimate goal of linking alterations in individual performance and genetic diversity to ecosystem structure and functioning. We found that tallgrass prairie was resistant to heat waves, but it was not resistant to extreme drought, which reduced aboveground net primary productivity (ANPP) below the lowest level measured in this grassland in almost thirty years (Hoover et al. in press(a)). This extreme reduction in ecosystem function was a consequence of reduced productivity of both C4 grasses and C3 forbs. This reduction in biomass of the C4 grasses (Andropogon gerardii and Sorghastrum nutans) was, in part, due to significant reductions in photosynthesis, leaf water potential and productivity with drought in the dominant grasses species, with S. nutans was more sensitive than A. gerardii to drought (Hoover et al. in press(b)). However, the dominant forb was negatively impacted by the drought more than the dominant grasses, and this led to a reordering of species abundances within the plant community. Although this change in community composition persisted post-drought, ANPP recovered completely the year after drought

  5. Illumina GA IIx& HiSeq 2000 Production Sequenccing and QC Analysis Pipelines at the DOE Joint Genome Institute

    SciTech Connect (OSTI)

    Daum, Christopher; Zane, Matthew; Han, James; Kennedy, Megan; San Diego, Matthew; Copeland, Alex; Li, Mingkun; Lucas, Susan

    2011-01-31T23:59:59.000Z

    The U.S. Department of Energy (DOE) Joint Genome Institute's (JGI) Production Sequencing group is committed to the generation of high-quality genomic DNA sequence to support the mission areas of renewable energy generation, global carbon management, and environmental characterization and clean-up. Within the JGI's Production Sequencing group, a robust Illumina Genome Analyzer and HiSeq pipeline has been established. Optimization of the sesequencer pipelines has been ongoing with the aim of continual process improvement of the laboratory workflow, reducing operational costs and project cycle times to increases ample throughput, and improving the overall quality of the sequence generated. A sequence QC analysis pipeline has been implemented to automatically generate read and assembly level quality metrics. The foremost of these optimization projects, along with sequencing and operational strategies, throughput numbers, and sequencing quality results will be presented.

  6. Robotic Enrichment Processing of Roche 454 Titanium Emlusion PCR at the DOE Joint Genome Institute

    SciTech Connect (OSTI)

    Hamilton, Matthew; Wilson, Steven; Bauer, Diane; Miller, Don; Duffy-Wei, Kecia; Hammon, Nancy; Lucas, Susan; Pollard, Martin; Cheng, Jan-Fang

    2010-05-28T23:59:59.000Z

    Enrichment of emulsion PCR product is the most laborious and pipette-intensive step in the 454 Titanium process, posing the biggest obstacle for production-oriented scale up. The Joint Genome Institute has developed a pair of custom-made robots based on the Microlab Star liquid handling deck manufactured by Hamilton to mediate the complexity and ergonomic demands of the 454 enrichment process. The robot includes a custom built centrifuge, magnetic deck positions, as well as heating and cooling elements. At present processing eight emulsion cup samples in a single 2.5 hour run, these robots are capable of processing up to 24 emulsion cup samples. Sample emulsions are broken using the standard 454 breaking process and transferred from a pair of 50ml conical tubes to a single 2ml tube and loaded on the robot. The robot performs the enrichment protocol and produces beads in 2ml tubes ready for counting. The robot follows the Roche 454 enrichment protocol with slight exceptions to the manner in which it resuspends beads via pipette mixing rather than vortexing and a set number of null bead removal washes. The robotic process is broken down in similar discrete steps: First Melt and Neutralization, Enrichment Primer Annealing, Enrichment Bead Incubation, Null Bead Removal, Second Melt and Neutralization and Sequencing Primer Annealing. Data indicating our improvements in enrichment efficiency and total number of bases per run will also be shown.

  7. First Annual U.S. Department of Energy Office of Science Joint Genome Institute User Meeting

    E-Print Network [OSTI]

    Various

    2006-01-01T23:59:59.000Z

    Genome Analysis of MTBE-Degrading Beta- Proteobacteriummethyl tert- butyl ether (MTBE). Strain PM1 can alsooften co-contaminants with MTBE in groundwater, including

  8. [Climate implications of terrestrial paleoclimate]. Quaternary Sciences Center, Desert Research Institute annual report, fiscal year 1994/1995

    SciTech Connect (OSTI)

    Wigand, P.E.

    1995-12-31T23:59:59.000Z

    The objective of this study is to collect terrestrial climate indicators for paleoclimate synthesis. The paleobiotic and geomorphic records are being examined for the local and regional impact of past climates to assess Yucca Mountain`s suitability as a high-level nuclear waste repository. In particular these data are being used to provide estimates of the timing, duration and extremes of past periods of moister climate for use in hydrological models of local and regional recharge that are being formulated by USGS and other hydrologists for the Yucca Mountain area. The project includes botanical, faunal, and geomorphic components that will be integrated to accomplish this goal. To this end personnel at the Quaternary Sciences Center of the Desert Research Institute in Reno, Nevada are conducting the following activities: Analyses of packrat middens; Analysis of pollen samples; and Determination of vegetation climate relationships.

  9. EXTREME VALUE ANALYSIS FOR CLIMATE TIME SERIES Institute for Mathematics Applied to Geosciences

    E-Print Network [OSTI]

    Katz, Richard

    Approach (Extremes + Non-Extremes) (8) Risk Communication under Climate Change #12;4 (1) Background · Use.isse.ucar.edu/staff/katz/ Lecture: ···/staff/katz/docs/pdf/banffrwk.pdf #12;2 Quote "Climate change undermines a basic assumption Cycles (annual, diurnal) Trends (global climate change) Physically-based covariates (e. g., El Niño

  10. James E. Hansen Columbia Univesity Earth Institute, Climate Science, Awareness and Solutions

    E-Print Network [OSTI]

    Hansen, James E.

    in the 1980s that helped raise awareness of global warming. He is a member of the U.S. National Academy awareness of the global warming issue. He was elected to the National Academy of Sciences in 1995 the human impact on global climate. He is best known for his testimony on climate change to Congress

  11. James E. Hansen Columbia University Earth Institute, Climate Science, Awareness and Solutions

    E-Print Network [OSTI]

    Hansen, James E.

    in the 1980s that helped raise awareness of global warming. He is a member of the U.S. National Academy awareness of the global warming issue. He was elected to the National Academy of Sciences in 1995 the human impact on global climate. He is best known for his testimony on climate change to Congress

  12. Algal Functional Annotation Tool from the DOE-UCLA Institute for Genomics and Proteomics

    DOE Data Explorer [Office of Scientific and Technical Information (OSTI)]

    Lopez, David

    The Algal Functional Annotation Tool is a bioinformatics resource to visualize pathway maps, identify enriched biological terms, or convert gene identifiers to elucidate biological function in silico. These types of analysis have been catered to support lists of gene identifiers, such as those coming from transcriptome gene expression analysis. By analyzing the functional annotation of an interesting set of genes, common biological motifs may be elucidated and a first-pass analysis can point further research in the right direction. Currently, the following databases have been parsed, processed, and added to the tool: 1( Kyoto Encyclopedia of Genes and Genomes (KEGG) Pathways Database, 2) MetaCyc Encyclopedia of Metabolic Pathways, 3) Panther Pathways Database, 4) Reactome Pathways Database, 5) Gene Ontology, 6) MapMan Ontology, 7) KOG (Eukaryotic Clusters of Orthologous Groups), 5)Pfam, 6) InterPro.

  13. Western Regional Center of the National Institute for Climatic Change Research

    SciTech Connect (OSTI)

    Hungate, Bruce A. [Northern Arizona Univ., Flagstaff, AZ (United States)

    2013-05-02T23:59:59.000Z

    The major goal of this project was fostering, integrating, synthesizing, and disseminating experimental, observational, and modeling research on predicted climate change in the western region of the U.S. and the impacts of that change on the structure, productivity, and climatic interactions of the region's natural and managed ecological systems. This was accomplished through administering a competitive grants program developed in collaboration with the other four regional centers of the NICCR. The activities supported included efforts to synthesize research on climate change in the western U.S. through meta-analysis studies, model comparisons, and data synthesis workshops. Results from this work were disseminated to the scientific and public media. This project also supported the development of the NICCR web site, hosted at NAU, which was used as the means to accept pre-proposal and proposal submissions for each funding cycle, and served as a clearing house for public outreach for results from NICCR-funded research

  14. Climate Change Institute director wants to increase information | ornl.gov

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative1 First Use of Energy for All Purposes (Fuel and Nonfuel), 2002; Level: National5Sales for4,645U.S. DOE Office511041clothAdvanced Materials Advanced. C o w l i t zManufacturing: U.S.Climate Action Plan ClimateFred

  15. James E. Hansen Columbia University Earth Institute, Climate Science, Awareness and Solutions

    E-Print Network [OSTI]

    Hansen, James E.

    awareness of global warming. He is a member of the U.S. National Academy of Sciences and has received change to congressional committees in the 1980s that helped raise broad awareness of the global warming and computer simulations of the Earth's climate, for the purpose of understanding the human impact on global

  16. Fourth National Research Conference on Climate Change Indian Institute of Technology Madras

    E-Print Network [OSTI]

    Srinivasan, N.

    on renewable energy. This event, the fourth in the series, intends to nurture and enhance a dedicated network in the areas of climate science, impacts, mitigation, adaptation, disaster risk reduction and renewable energy is available for travel and local expenses). #12;

  17. FUNCTIONAL GENOMICS Program of Study

    E-Print Network [OSTI]

    Thomas, Andrew

    FUNCTIONAL GENOMICS Program of Study Research Areas Students Applying Correspondence Graduate Genomics. Students receive training in the biological, physical and computational sciences through of primary institutional affiliation. The Functional Genomics program is administered through the Graduate

  18. The Future of Microbial Genomics

    SciTech Connect (OSTI)

    Kyrpides, Nikos [Genome Biology group at the DOE Joint Genome Institute

    2010-06-02T23:59:59.000Z

    Nikos Kyrpides, head of the Genome Biology group at the DOE Joint Genome Institute discusses current challenges in the field of microbial genomics on June 2, 2010 at the "Sequencing, Finishing, Analysis in the Future" meeting in Santa Fe, NM

  19. Mind the gap in SEA: An institutional perspective on why assessment of synergies amongst climate change mitigation, adaptation and other policy areas are missing

    SciTech Connect (OSTI)

    Vammen Larsen, Sanne, E-mail: sannevl@plan.aau.dk [Aalborg University, Lautrupvang 1A, 2750 Ballerup (Denmark); Kornov, Lone, E-mail: lonek@plan.aau.dk [Aalborg University, Fibigerstraede 13, 9220 Aalborg O (Denmark); Wejs, Anja, E-mail: wejs@plan.aau.dk [Aalborg University, Fibigerstraede 13, 9220 Aalborg O (Denmark)

    2012-02-15T23:59:59.000Z

    This article takes its point of departure in two approaches to integrating climate change into Strategic Environmental Assessment (SEA): Mitigation and adaptation, and in the fact that these, as well as the synergies between them and other policy areas, are needed as part of an integrated assessment and policy response. First, the article makes a review of how positive and negative synergies between a) climate change mitigation and adaptation and b) climate change and other environmental concerns are integrated into Danish SEA practice. Then, the article discusses the implications of not addressing synergies. Finally, the article explores institutional explanations as to why synergies are not addressed in SEA practice. A document analysis of 149 Danish SEA reports shows that only one report comprises the assessment of synergies between mitigation and adaptation, whilst 9,4% of the reports assess the synergies between climate change and other environmental concerns. The consequences of separation are both the risk of trade-offs and missed opportunities for enhancing positive synergies. In order to propose explanations for the lacking integration, the institutional background is analysed and discussed, mainly based on Scott's theory of institutions. The institutional analysis highlights a regulatory element, since the assessment of climate change synergies is underpinned by legislation, but not by guidance. This means that great focus is on normative elements such as the local interpretation of legislation and of climate change mitigation and adaptation. The analysis also focuses on how the fragmentation of the organisation in which climate change and SEA are embedded has bearings on both normative and cultural-cognitive elements. This makes the assessment of synergies challenging. The evidence gathered and presented in the article points to a need for developing the SEA process and methodology in Denmark with the aim to include climate change in the assessments in a more systematic and integrated manner. - Highlights: Black-Right-Pointing-Pointer Synergies between climate change mitigation, adaptation and other environmental concerns are not addressed in Danish SEA. Black-Right-Pointing-Pointer Institutional explanations relate to organisational set-ups and understandings of climate change as a new planning issue. Black-Right-Pointing-Pointer The paper points to a need for developing SEA to include climate change in a more systematic and integrated manner.

  20. Final Report: Northeastern Regional Center of the DOE's National Institute for Climatic Change Research

    SciTech Connect (OSTI)

    Davis, Kenneth

    2014-01-14T23:59:59.000Z

    Administration of the NERC of NICCR began at Penn State in December of 2005 and ended in December of 2011. During that time, five requests for proposals were released and five rounds of proposals were reviewed, awarded and administered. Throughout this award, 203 pre-proposals have been received by the NERC in five RFPS and 110 full proposals invited. Of the 110 full proposals reviewed, 53 were funded (most in full, some partially) resulting in 51 subcontracts. These awards were distributed among 17 universities and 3 non-governmental research institutes. Full proposals have been received from 29 universities and 5 non-governmental research institutes. Research activities have now been completed.

  1. Environmental Genomics Reveals a Single-Species Ecosystem Deep Earth

    E-Print Network [OSTI]

    Arkin, Adam P.

    2014-01-01T23:59:59.000Z

    Environmental Genomics Reveals a Single-Species EcosystemTechnology Program, DOE Joint Genomics Institute, Berkeley,and Environmental Research, Genomics:GTL program through

  2. DOE JGI Whole Genome Shotgun Sequencing, part 1

    ScienceCinema (OSTI)

    Miranda Harmon-Smith

    2010-09-01T23:59:59.000Z

    A Howard Hughes Medical Institute (HHMI) video production describing the Whole Genome Shotgun Sequencing process at the US Department of Energy's Joint Genome Institute (JGI).

  3. DOE JGI Whole Genome Shotgun Sequencing, part 3

    ScienceCinema (OSTI)

    Miranda Harmon-Smith

    2010-09-01T23:59:59.000Z

    A Howard Hughes Medical Institute (HHMI) video production describing the Whole Genome Shotgun Sequencing process at the US Department of Energy's Joint Genome Institute (JGI).

  4. DOE JGI Whole Genome Shotgun Sequencing, part 2

    ScienceCinema (OSTI)

    Miranda Harmon-Smith

    2010-09-01T23:59:59.000Z

    A Howard Hughes Medical Institute (HHMI) video production describing the Whole Genome Shotgun Sequencing process at the US Department of Energy's Joint Genome Institute (JGI).

  5. Climate-Energy Nexus

    SciTech Connect (OSTI)

    Gary Sayler; Randall Gentry; Jie Zhuang

    2010-07-01T23:59:59.000Z

    The 140-page published proceedings of the workshop include individual articles and PowerPoint slides for all workshop presentations. The proceedings also contain pertinent background information on the China-US Joint Research Center, partnering organizations, and workshop goals and objectives. Overall, the workshop increased the understanding of the impacts of climate change on energy use and renewable energy production as well as the complex relationships among land use, energy production, and ecological restoration. The workshop served as an international platform for scientists and students of different research backgrounds to develop a unified perspective on energy and climate relationships. Such understanding will benefit future cooperation between China and the US in mitigating global climate change. The workshop’s agenda, which is highly interdisciplinary, explored many potential opportunities for international collaboration in ecosystem management, climate modeling, greenhouse gas emissions, and bioenergy sustainability. International research groups have been suggested in the areas of genomes and biotechnology of energy plants, sustainable management of soil and water resources, carbon sequestration, and microbial processes for ecological cycles. The project has attracted considerable attention from institutes beyond the China-US Joint Research Center partners, and several of them (such as Institute of Qing-Tibet Plateau Research, Institute of Soil and Water Conservation, Institute of Applied Ecology, CAS) have expressed interest in joining the partnership. In addition, the workshop played a significant role in facilitating establishment of private-public partnerships between government and private bioenergy companies (such as L.R. Shugarts and Associates, Inc.), including seed providers (Blade Energy Crops, Thousand Oaks, CA), pilot demonstration projects at coal-producing cities (e.g., Huaibei, Anhui province, China), and the development of methodology for assessment of the sustainable production of biofuels (such as life-cycle analysis, sustainability metrics, and land-use policy). Establishment of two US-China scientific research networks in the area of bioenergy and environmental science is a significant result of the workshop.

  6. Aspen Global Change Institute (AGCI) Interdisciplinary Science Workshop: Decadal Climate Prediction; Aspen, CO; June 22-28, 2008

    SciTech Connect (OSTI)

    Katzenberger, John

    2010-03-12T23:59:59.000Z

    Decadal prediction lies between seasonal/interannual forecasting and longer-term climate change projections, and focuses on time-evolving regional climate conditions over the next 10?30 yr. Numerous assessments of climate information user needs have identified this time scale as being important to infrastructure planners, water resource managers, and many others. It is central to the information portfolio required to adapt effectively to and through climatic changes.

  7. JGI Fungal Genomics Program

    SciTech Connect (OSTI)

    Grigoriev, Igor V.

    2011-03-14T23:59:59.000Z

    Genomes of energy and environment fungi are in focus of the Fungal Genomic Program at the US Department of Energy Joint Genome Institute (JGI). Its key project, the Genomics Encyclopedia of Fungi, targets fungi related to plant health (symbionts, pathogens, and biocontrol agents) and biorefinery processes (cellulose degradation, sugar fermentation, industrial hosts), and explores fungal diversity by means of genome sequencing and analysis. Over 50 fungal genomes have been sequenced by JGI to date and released through MycoCosm (www.jgi.doe.gov/fungi), a fungal web-portal, which integrates sequence and functional data with genome analysis tools for user community. Sequence analysis supported by functional genomics leads to developing parts list for complex systems ranging from ecosystems of biofuel crops to biorefineries. Recent examples of such 'parts' suggested by comparative genomics and functional analysis in these areas are presented here

  8. Genomic Encyclopedia of Fungi

    SciTech Connect (OSTI)

    Grigoriev, Igor

    2012-08-10T23:59:59.000Z

    Genomes of fungi relevant to energy and environment are in focus of the Fungal Genomic Program at the US Department of Energy Joint Genome Institute (JGI). Its key project, the Genomics Encyclopedia of Fungi, targets fungi related to plant health (symbionts, pathogens, and biocontrol agents) and biorefinery processes (cellulose degradation, sugar fermentation, industrial hosts), and explores fungal diversity by means of genome sequencing and analysis. Over 150 fungal genomes have been sequenced by JGI to date and released through MycoCosm (www.jgi.doe.gov/fungi), a fungal web-portal, which integrates sequence and functional data with genome analysis tools for user community. Sequence analysis supported by functional genomics leads to developing parts list for complex systems ranging from ecosystems of biofuel crops to biorefineries. Recent examples of such parts suggested by comparative genomics and functional analysis in these areas are presented here.

  9. Oregon Climate Assessment Report December 2010

    E-Print Network [OSTI]

    Pierce, Stephen

    - Climate change and agriculture in Oregon"" " " " " 151 Chapter 5 - The potential effects of climate changeOregon Climate Assessment Report December 2010 Oregon Climate Change Research Institute #12;Oregon Climate Assessment Report December 2010 Oregon Climate Change Research Institute Recommended citation

  10. ZipperDB: Predictions of Fibril-forming Segments within Proteins Identified by the 3D Profile Method (from the UCLA-DOE Institute for Genomics and Proteomics)

    DOE Data Explorer [Office of Scientific and Technical Information (OSTI)]

    Goldschmidt, L.; Teng, P. K.; Riek, R.; Eisenberg, D.

    ZipperDB contains predictions of fibril-forming segments within proteins identified by the 3D Profile Method. The UCLA-DOE Institute for Genomics and Proteomics has analyzed over 20,000 putative protein sequences for segments with high fibrillation propensity that could form a "steric zipper"ùtwo self-complementary beta sheets, giving rise to the spine of an amyloid fibril. The approach is unique in that structural information is used to evaluate the likelihood that a particular sequence can form fibrils. [copied with edits from http://www.doe-mbi.ucla.edu/]. In addition to searching the database, academic and non-profit users may also submit their protein sequences to the database.

  11. Environmental genomics reveals a single species ecosystem deep within the Earth

    E-Print Network [OSTI]

    Chivian, Dylan

    2008-01-01T23:59:59.000Z

    Environmental genomics reveals a single species ecosystemMaterial for Environmental genomics reveals a single speciesTechnology Program, DOE Joint Genomics Institute, Berkeley,

  12. Climate Change and San Francisco Bay-Delta Tidal Wetlands

    E-Print Network [OSTI]

    Parker, V. Thomas; Callaway, John C.; Schile, Lisa M.; Vasey, Michael C.; Herbert, Ellen R.

    2011-01-01T23:59:59.000Z

    National Institute for Climate Change Research, Coastalthe context of predicted climate change. Madroño 54(3):234–18–20. Dettinger MD. 2005. From climate-change spaghetti to

  13. Automated Microbial Genome Annotation

    SciTech Connect (OSTI)

    Land, Miriam [DOE Joint Genome Institute at Oak Ridge National Laboratory

    2009-05-29T23:59:59.000Z

    Miriam Land of the DOE Joint Genome Institute at Oak Ridge National Laboratory gives a talk on the current state and future challenges of moving toward automated microbial genome annotation at the "Sequencing, Finishing, Analysis in the Future" meeting in Santa Fe, NM

  14. Methods in comparative genomics: genome correspondence, gene identification and motif discovery

    E-Print Network [OSTI]

    Kellis, Manolis

    1 Methods in comparative genomics: genome correspondence, gene identification and motif discovery@mit.edu, nickp@genome.wi.mit.edu, bwb@genome.wi.mit.edu, bab@mit.edu, lander@wi.mit.edu (1) MIT/Whitehead Institute Center for Genome Research, 320 Charles St., Cambridge MA 02139 (2) MIT Computer Science

  15. Training for Climate Adaptation in Conservation

    Broader source: Energy.gov [DOE]

    The Wildlife Conservation Society and the Northern Institute of Applied Climate Science are hosting this two-day training for climate adaptation.

  16. Hindawi Publishing Corporation Comparative and Functional Genomics

    E-Print Network [OSTI]

    Newcastle upon Tyne, University of

    Hindawi Publishing Corporation Comparative and Functional Genomics Volume 2007, Article ID 47304, 7 pages doi:10.1155/2007/47304 Meeting Report eGenomics: Cataloguing Our Complete Genome Collection III, Michigan State University, East Lansing, MI 48824, USA 3 The Institute for Genomic Research, 9712 Medical

  17. SHORT REVIEW Ecological genomics: understanding gene and

    E-Print Network [OSTI]

    Kaufman, Glennis A.

    SHORT REVIEW Ecological genomics: understanding gene and genome function in the natural environment MC Ungerer, LC Johnson and MA Herman Division of Biology, Ecological Genomics Institute, Kansas State University, Manhattan, KS, USA The field of ecological genomics seeks to understand the genetic mechanisms

  18. Defining Genome Project Standards in a New Era of Sequencing

    SciTech Connect (OSTI)

    Chain, Patrick [DOE-JGI

    2009-05-27T23:59:59.000Z

    Patrick Chain of the DOE Joint Genome Institute gives a talk on behalf of the International Genome Sequencing Standards Consortium on the need for intermediate genome classifications between "draft" and "finished"

  19. DOE Designated User Facilities Multiple Laboratories * ARM Climate...

    Broader source: Energy.gov (indexed) [DOE]

    * Energy Sciences Network( ESnet) ** * Joint Genome Institute (JGI) - Production Genomics Facility(PGF)** (joint with LLNL, LANL, ORNL and PNNL) * Advanced Light Source (ALS)...

  20. aa genome oryza: Topics by E-print Network

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    , Jian Wang1,2* , Gane Ka-Shu Wong1,2,11* , Huanming Yang1,2* 1 Beijing Institute of Genomics of the Chinese Academy of Sciences, Beijing Genomics Institute, Beijing Proteomics...

  1. THE CAMPAIGN FOR UC SANTA CRUZ THE GENOMICS

    E-Print Network [OSTI]

    California at Santa Cruz, University of

    THE CAMPAIGN FOR UC SANTA CRUZ THE GENOMICS INSTITUTE #12;OVERVIEW The UC Santa Cruz Genomics Institute provides the framework for the next great leap in the science of genomics. ensured it would genomic science and speed the benefits of discoveries that improve and save lives. Cancer, autoimmune

  2. archaeal genomes exemplifies: Topics by E-print Network

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    14-mer Chemistry Websites Summary: Institute, and Department of Energy Institute for Genomics and Proteomics, 201 Boyer Hall Molecular Biology >100 residues in length, e.g.,...

  3. Genome Snapshot: a new resource at the Saccharomyces Genome Database (SGD) presenting

    E-Print Network [OSTI]

    Botstein, David

    Genome Snapshot: a new resource at the Saccharomyces Genome Database (SGD) presenting an overview of the Saccharomyces cerevisiae genome Jodi E. Hirschman, Rama Balakrishnan, Karen R. Christie, Maria C. Costanzo, 5-Sigler Institute for Integrative Genomics, Carl Icahn Laboratory, Princeton University, Washington Road, Princeton

  4. The Center for integrative genomics

    E-Print Network [OSTI]

    Fankhauser, Christian

    , a new advenTure · a new institute with state-of-the-art technologies and facilities · Cutting edge roles for the human herpes simplex virus host cell factor HCF- in controlling genome duplication, transcription factors, a

  5. Leading Edge Bacterial Genomics and Pathogen Evolution

    E-Print Network [OSTI]

    Mekalanos, John

    Leading Edge Review Bacterial Genomics and Pathogen Evolution David M. Raskin,1 Rekha Seshadri,2 Medical School, Boston, MA 02115, USA 2 The Institute for Genomic Research, 9712 Medical Center Drive.02.002 The availability of hundreds of bacterial genome sequences has altered the study of bacte- rial pathogenesis

  6. Accelerating Biofuel Feedstock Crop Improvement with Miscanthus Genomics (2014 DOE JGI Genomics of Energy & Environment Meeting)

    SciTech Connect (OSTI)

    Swaminathan, Kankshita [Energy Biosciences Institute

    2014-03-20T23:59:59.000Z

    Kankshita Swaminathan of the Energy Biosciences Institute speaks at the 9th Annual Genomics of Energy & Environment Meeting on March 20, 2014 in Walnut Creek, Calif.

  7. Climate VISION: Private Sector Initiatives: Iron and Steel: Work...

    Office of Scientific and Technical Information (OSTI)

    Institute (AISI) has developed a work plan based on AISI's commitment letter and the Climate Challenge Program which addresses the overall elements of the Climate VISION program...

  8. Genome Biology 2003, 4:R43 commentreviewsreportsdepositedresearchrefereedresearchinteractionsinformation

    E-Print Network [OSTI]

    Kellis, Manolis

    , Massachusetts Institute of Technology, Cambridge, MA 02139, USA. §Whitehead/MIT Center for Genome Research, Department of Biology, Massachusetts Institute of Technology, Cambridge, MA 02139, USA. ¶Department of Genome conserved word pairs associated with gene-expression changes in yeastsTranscriptional regulation

  9. Discovering Geometric Patterns in Genomic Data Wenxuan Gao

    E-Print Network [OSTI]

    Grossman, Robert

    Discovering Geometric Patterns in Genomic Data Wenxuan Gao Department of Computer Science University of Illinois at Chicago wgao5@uic.edu Christopher Brown Institute for Genomics & Systems Biology caseybrown@uchicago.edu Robert L. Grossman Institute for Genomics & Systems Biology robert.grossman @uchicago

  10. 2013 REU Program in Computational Neuropsychiatric Genomics research experiences for undergraduates

    E-Print Network [OSTI]

    Kemner, Ken

    2013 REU Program in Computational Neuropsychiatric Genomics research experiences for undergraduates University of Illinois at Chicago University of Haifa Harvard Medical School IGSB Institute for Genomics & Systems Biology #12;2013 REU Program in Computational Neuropsychiatric Genomics research experiences

  11. 2015 REU Program in Computational Neuropsychiatric Genomics research experiences for undergraduates

    E-Print Network [OSTI]

    Kemner, Ken

    2015 REU Program in Computational Neuropsychiatric Genomics research experiences for undergraduates Harvard Medical School ! IGSB Institute for Genomics & Systems Biology www.contechicago.org #12;2015 REU Program in Computational Neuropsychiatric Genomics research experiences for undergraduates The Conte

  12. JIBS | Joint Institute for Biological Sciences | ORNL

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    joint institute is located close to ORNL's Laboratory for Comparative and Functional Genomics, other biomolecular sciences research laboratories, and the Environmental Sciences...

  13. Climate-development-energy policy related seminars

    E-Print Network [OSTI]

    Sussex, University of

    Paula Kivimaa (Finnish Environment Institute) From energy to climate policy in Finland Energy & climate Energy & Climate Tue 3rd Dec 18.00- 19.30 Large Jubilee Jeremy Leggett (SolarCentury) The EnergyClimate-development-energy policy related seminars Autumn term 2013 Date Time Location Speaker

  14. Prescreening Illumina Data Results in High-Quality Genome Polishing

    SciTech Connect (OSTI)

    Han, Cliff [DOE Joint Genome Institute at Los Alamos National Laboratory

    2009-05-28T23:59:59.000Z

    Cliff Han of the DOE Joint Genome Institute at Los Alamos National Laboratory, talks about modifying their bacterial genome sequencing process to accommodate new sequencing technologies at the "Sequencing, Finishing, Analysis in the Future" meeting in Santa Fe, NM

  15. Functional genomics as a window on radiation stress signaling Sally A Amundson*,1

    E-Print Network [OSTI]

    Functional genomics as a window on radiation stress signaling Sally A Amundson*,1 , Michael Bittner 20892, USA; 2 National Human Genome Research Institute, National Institutes of Health, Bethesda, MD before the completion of the human genome draft sequence, a number of techniques for genomic expression

  16. Genome duplications (polyploidy) / ancientGenome duplications (polyploidy) / ancient genome duplications (genome duplications (paleopolyploidypaleopolyploidy))

    E-Print Network [OSTI]

    Utrecht, Universiteit

    Genome duplications (polyploidy) / ancientGenome duplications (polyploidy) / ancient genome duplications (genome duplications (paleopolyploidypaleopolyploidy)) Mechanism? e.g. a diploid cell undergoes;Paramecium genome duplicationsParamecium genome duplications #12;Comparison of two scaffolds originating from

  17. Implications of Climate Science for Policy

    E-Print Network [OSTI]

    Jacoby, H.D.

    2013-07-18T23:59:59.000Z

    Climate change presents the greatest challenge ever faced by our domestic and international institutions, and a great deal of the difficulty lies in the science of the issue. Because human influence on global climate differs ...

  18. NERSC/DOE BER Requirements Workshop Participants

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Gilbert Compo University of Colorado Climate Robert Egan Joint Genome Institute Genomics David Goodstein Joint Genome Institute Genomics Ruby Leung Pacific Northwest National...

  19. Genomics and Systems Biology

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Genomics and Systems Biology Genomics and Systems Biology Los Alamos scientists perform research in functional genomics and structural genomics, and applications for such work...

  20. Molluscan Evolutionary Genomics

    E-Print Network [OSTI]

    Simison, W. Brian

    2010-01-01T23:59:59.000Z

    59179 Molluscan Evolutionary Genomics W. Brian Simison andBoore Molluscan Evolutionary Genomics W. Brian Simison andL. Boore Evolutionary Genomics Department, DOE Joint Genome

  1. Bioinformatics InstituteBII 2009

    E-Print Network [OSTI]

    Tan, Chew Lim

    bioinformatics Institute is dedicated to discover biomolecular mechanisms in a computational biology of biomolecular mechanisms that link genome information and phenotypes. Computational biology has entered a new biology becomes instrumental to generate qualitatively new biological insight. The Bioinformatics

  2. Genome Engineering

    SciTech Connect (OSTI)

    Voytas, Dan [University of Minnesota

    2014-03-20T23:59:59.000Z

    Dan Voytas, University of Minnesota, at the 9th Annual Genomics of Energy & Environment Meeting on March 20, 2014 in Walnut Creek, Calif

  3. COMPUTATIONAL COMPARATIVE GENOMICS: GENES, REGULATION, EVOLUTION

    E-Print Network [OSTI]

    Kellis, Manolis

    COMPUTATIONAL COMPARATIVE GENOMICS: GENES, REGULATION, EVOLUTION by Manolis (Kellis) Kamvysselis B.S. Electrical Engineering and Computer Science; M. Eng. Computer Science and Engineering Massachusetts Institute at the Massachusetts Institute of Technology June 2003 © 2003 Massachusetts Institute of Technology All rights reserved

  4. Research Fellow (PhD position) at the Bjerknes Centre for Climate Research/ Geophysical Institute A 4-year position as research fellow (PhD position) is available at the Bjerknes Centre for Climate Research

    E-Print Network [OSTI]

    Løw, Erik

    is important for the variability in mid latitude cyclone tracks and intensity and investigate how a warmer climate may influence cyclone development. The PhD candidate will work on analysis of atmospheric/European region. Special emphasis will be on trying to separate the different mechanisms that may spin up

  5. Genomics and Systems Biology of Tuberculosis (2009 JGI User Meeting)

    ScienceCinema (OSTI)

    Galagan, James

    2011-04-25T23:59:59.000Z

    James Galagan from the Broad Institute spoke about the "Genomics and Systems Biology of TB" on March 26, 2009 during the 4th Annual User Meeting

  6. Climate & Environmental Sciences | Clean Energy | ORNL

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Climate Change Science Institute Earth and Aquatic Sciences Ecosystem Science Environmental Data Science and Systems Energy-Water Resource Systems Human Health Risk and...

  7. Climate Science and Drought

    E-Print Network [OSTI]

    Gordon, W.

    2011-01-01T23:59:59.000Z

    Texas Climate Change and Drought Wendy Gordon, Ph.D. The University of Texas ? Austin Environmental Science Institute Texas Wildfires 2011 From the beginning of the fire season on November 15, 2010 to October 31, 2011 nearly 28,000 fires had... have been particularly severe due to the ongoing 2011 Southern US drought, and exacerbating the problem is land management practices, the unusual convergence of strong winds, unseasonably warm temperatures, and low humidity. Climate...

  8. Sandia National Laboratories: American Institute of Aeronautics...

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Institute of Aeronautics and Astronautics Two Sandia Leaders Elected American Association for the Advancement of Science Fellows On December 15, 2014, in Climate, Energy,...

  9. Fueling Future with Algal Genomics

    SciTech Connect (OSTI)

    Grigoriev, Igor

    2012-07-05T23:59:59.000Z

    Algae constitute a major component of fundamental eukaryotic diversity, play profound roles in the carbon cycle, and are prominent candidates for biofuel production. The US Department of Energy Joint Genome Institute (JGI) is leading the world in algal genome sequencing (http://jgi.doe.gov/Algae) and contributes of the algal genome projects worldwide (GOLD database, 2012). The sequenced algal genomes offer catalogs of genes, networks, and pathways. The sequenced first of its kind genomes of a haptophyte E.huxleyii, chlorarachniophyte B.natans, and cryptophyte G.theta fill the gaps in the eukaryotic tree of life and carry unique genes and pathways as well as molecular fossils of secondary endosymbiosis. Natural adaptation to conditions critical for industrial production is encoded in algal genomes, for example, growth of A.anophagefferens at very high cell densities during the harmful algae blooms or a global distribution across diverse environments of E.huxleyii, able to live on sparse nutrients due to its expanded pan-genome. Communications and signaling pathways can be derived from simple symbiotic systems like lichens or complex marine algae metagenomes. Collectively these datasets derived from algal genomics contribute to building a comprehensive parts list essential for algal biofuel development.

  10. Meeting report The changing face of genomics

    E-Print Network [OSTI]

    Kellis, Manolis

    , Massachusetts Institute of Technology and Harvard University, Cambridge, MA 02138. MIT Computer Science the new challenges in genomics, particularly in the areas of gene regulation, cell dynamics, and genome evolution. (1) Regulation: Systematic discovery of all regulatory elements Given the primary sequence

  11. Potential of metabolomics as a functional genomics tool

    E-Print Network [OSTI]

    Wurtele, Eve Syrkin

    Potential of metabolomics as a functional genomics tool Raoul J. Bino1,2,3 , Robert D. Hall2 3 Centre for BioSystems Genomics, POB 98, 6700 AB Wageningen, The Netherlands 4 Max-Planck Institute Australian Centre for Plant Functional Genomics, School of Botany, University of Melbourne, Victoria 3010

  12. Massive changes in genome architecture accompany the transition to self-fertility in the filamentous fungus Neurospora tetrasperma

    E-Print Network [OSTI]

    , Albuquerque, New Mexico 87131 §§ Department of Energy Joint Genome Institute, Walnut Creek, California 94598

  13. Addressing Climate Change in Environmental Impact Analysis

    E-Print Network [OSTI]

    Minnesota, University of

    Addressing Climate Change in Environmental Impact Analysis 2010 CTS Research Conference Carissa impact analysis (EIA) as a tool to address climate change ·! Consider approaches to measuring and addressing climate change at the project scale #12;Purpose ·! Funded by U of M Institute on the Environment

  14. OUR CHANGING CLIMATE Research that matters

    E-Print Network [OSTI]

    Lucarini, Valerio

    , for the benefit of society. The Institute spans a range of disciplines including weather and climate, agriculture | 3 The Department of Energy and Climate Change (DECC) has used results from our work, on the impacts key advice to the UK Government on avoiding dangerous climate change. Our input was based on research

  15. The Earth Institute, Columbia University14 Annual Donor Report 2009 15 Heat waves are on the rise as the climate changes and average temperatures increase.

    E-Print Network [OSTI]

    The Earth Institute, Columbia University14 Annual Donor Report 2009 15 Heat waves are on the rise University and Barnard College. Known as the Columbia Green Roof Consortium, it is led by a team of two Earth solutions in a responsible and scientific way--and Columbia had plenty of roof space to work with. "They

  16. JGI Fungal Genomics Program

    E-Print Network [OSTI]

    Grigoriev, Igor V.

    2012-01-01T23:59:59.000Z

    JGI Fungal Genomics Program Igor V. Grigoriev 1 Lawrenceof California. JGI Fungal Genomics Program Contact: IgorJGI). Its key project, the Genomics Encyclopedia of Fungi,

  17. JGI Fungal Genomics Program

    E-Print Network [OSTI]

    Grigoriev, Igor V.

    2011-01-01T23:59:59.000Z

    View Supports functional genomics, user data deposition andJGI Fungal Genomics Program Igor V. Grigoriev 1 DOE Jointof California. JGI Fungal Genomics Program Contact: Igor

  18. Fungal Genomics Program

    E-Print Network [OSTI]

    Grigoriev, Igor

    2012-01-01T23:59:59.000Z

    strains Comparative genomics and transcriptomics of xyloseFungal Genomics Program Igor Grigoriev 1 * (complex communities Fungal Genomics Program Igor Grigoriev

  19. New Approaches and Technologies to Sequence de novo Plant reference Genomes (2013 DOE JGI Genomics of Energy and Environment 8th Annual User Meeting)

    SciTech Connect (OSTI)

    Schmutz, Jeremy [HudsonAlpha Institute

    2013-03-01T23:59:59.000Z

    Jeremy Schmutz of the HudsonAlpha Institute for Biotechnology on "New approaches and technologies to sequence de novo plant reference genomes" at the 8th Annual Genomics of Energy & Environment Meeting on March 27, 2013 in Walnut Creek, Calif.

  20. THE NELSON INSTITUTE FOR ENVIRONMENTAL STUDIES

    E-Print Network [OSTI]

    Sheridan, Jennifer

    THE CENTER FOR CLIMATIC RESEARCH THE NELSON INSTITUTE FOR ENVIRONMENTAL STUDIES UNIVERSITY Institute for Environmental Studies 1225 W. Dayton St. Madison, WI 53706-1695 Phone: (608) 262-2839 Fax and private sector. · Study past climates, investigating the ef- fects of solar and volcanic variability

  1. Building on a Decade of Accomplishments Report of the 2010 Blue Ribbon Panel on Genomics

    E-Print Network [OSTI]

    Levin, Judith G.

    Building on a Decade of Accomplishments Report of the 2010 Blue Ribbon Panel on Genomics Division of Microbiology and Infectious Diseases, Genomics Programs National Institute of Allergy and Infectious Diseases Blue Ribbon Panel on Genomics Division of Microbiology and Infectious Diseases, Genomics Programs

  2. Comparative Microbial Genomics group CenterforBiologicalSequenceanalysisDepartmentofSystemsBiology,TechnicalUniversityofDenmark

    E-Print Network [OSTI]

    Ussery, David W.

    Comparative Microbial Genomics group CenterforBiologicalSequenceanalysisDepartmentofSystemsBiology,TechnicalUniversityofDenmark Burkholderia Pan-genomics Dave Ussery Max Planck Institut fur Terrestrial Microbiology Marburg, Germany 26 May, 2008 - or - What can we learn from more than 50 sequenced genomes? #12;Comparative Microbial Genomics

  3. The Corn and Climate Report

    E-Print Network [OSTI]

    Debinski, Diane M.

    Administration National Weather Service North Central Bioeconomy Consortium US Climate Change Science Program Editorial Board Brendan Jordan, Great Plains Institute, staff for the North Central Bioeconomy Consortium Institute, staff for the North Central Bioeconomy Consortium Prepared by Megan Hassler and Sarah Wash Corn

  4. BC Agriculture Climate Change Adaptation Risk + Opportunity Assessment Series

    E-Print Network [OSTI]

    Pedersen, Tom

    BC Agriculture Climate Change Adaptation Risk + Opportunity Assessment Series Livestock Agriculture & Food Climate Action Initiative www.BCAgClimateAction.ca project funding provided by Agriculture and Agri-food Canada BC Ministry of Agriculture BC Ministry of Environment Pacific Institute for Climate

  5. BC Agriculture Climate Change Adaptation Risk + Opportunity Assessment Series

    E-Print Network [OSTI]

    Pedersen, Tom

    BC Agriculture Climate Change Adaptation Risk + Opportunity Assessment Series Wine Grape & Tree Agriculture & Food Climate Action Initiative www.BCAgClimateAction.ca project funding provided by Agriculture and Agri-food Canada BC Ministry of Agriculture BC Ministry of Environment Pacific Institute for Climate

  6. Climate Ethics and Responsibility A Study of Environmental Virtue

    E-Print Network [OSTI]

    Greifswald, Ernst-Moritz-Arndt-Universität

    Climate Ethics and Responsibility A Study of Environmental Virtue Institute for Botany. Theoretical Concept 2.1. General Concept of Climate Ethics 2.2. Responsibility for Climate Change Mitigation2.2. Responsibility for Climate Change Mitigation 2.3. Moral Transformational Leadership 3. Application to Carbon

  7. AWI Conference on Global Climate Change Conference Program

    E-Print Network [OSTI]

    Yamamoto, Hirosuke

    » slides (ppt) 10:15 » Break 10:45 » Food and Agriculture Issues How will climate change impact foodAWI Conference on Global Climate Change Conference Program APRU World Institute Workshop on Climate Board 2:30 » Climate Changes Overview Richard C.J. SOMERVILLE, Distinguished Professor, Scripps

  8. A GSC Global Genome Census (GSC8 Meeting)

    ScienceCinema (OSTI)

    Kyrpides, Nikos [DOE JGI

    2011-04-29T23:59:59.000Z

    The Genomic Standards Consortium was formed in September 2005. It is an international, open-membership working body which promotes standardization in the description of genomes and the exchange and integration of genomic data. The 2009 meeting was an activity of a five-year funding "Research Coordination Network" from the National Science Foundation and was organized held at the DOE Joint Genome Institute with organizational support provided by the JGI and by the University of California - San Diego. Nikos Kyrpides of the DOE Joint Genome Institute discusses the notion of a global genome census at the Genomic Standards Consortium's 8th meeting at the DOE JGI in Walnut Creek, Calif. on Sept. 9, 2009.

  9. Climate Change and Disease Ecology You are invited to join Drew Harvell, Kelly Zamudio, and Laura Harrington for a lunch

    E-Print Network [OSTI]

    Angenent, Lars T.

    genomics capacity at Cornell could improve our linkages with the Life Sciences initiative and capacity in the future; and 3) to discuss potential collaborations in the area of climate change and genetics/genomics

  10. Genome Analyses and Supplement Data from the International Populus Genome Consortium (IPGC)

    DOE Data Explorer [Office of Scientific and Technical Information (OSTI)]

    International Populus Genome Consortium (IPGC)

    The sequencing of the first tree genome, that of Populus, was a project initiated by the Office of Biological and Environmental Research in DOE’s Office of Science. The International Populus Genome Consortium (IPGC) was formed to help develop and guide post-sequence activities. The IPGC website, hosted at the Oak Ridge National Laboratory, provides draft sequence data as it is made available from DOE Joint Genome Institute, genome analyses for Populus, lists of related publications and resources, and the science plan. The data are available at http://www.ornl.gov/sci/ipgc/ssr_resource.htm.

  11. DOE Joint Genome Institute 2008 Progress Report

    E-Print Network [OSTI]

    Gilbert, David

    2009-01-01T23:59:59.000Z

    digestion, could produce biogas—primarily methane and carbongasoline per day. When biogas is cleaned of its particulates

  12. DOE Joint Genome Institute 2008 Progress Report

    E-Print Network [OSTI]

    Gilbert, David

    2009-01-01T23:59:59.000Z

    and Outreach Safety and Ergonomics Appendices Appendix A:QA, Instrumenta- tion, Ergonomics, Informatics) in the pastReport 2008 safety and ergonomics Safety is a core value of

  13. DOE Joint Genome Institute 2008 Progress Report

    E-Print Network [OSTI]

    Gilbert, David

    2009-01-01T23:59:59.000Z

    of such promis- ing renewable biomass include perennialgenomics of renewable energy strategies, biomass conversiona renewable resource. Lig- nocellulose is biomass composed

  14. DOE Joint Genome Institute 2008 Progress Report

    E-Print Network [OSTI]

    Gilbert, David

    2009-01-01T23:59:59.000Z

    materi- als into ethanol and other fuels. Developing Pichiais the leading U.S. fuel ethanol crop (sorghum is second).to economic lignocellulosic fuel ethanol. The DOE has made

  15. DOE Joint Genome Institute 2008 Progress Report

    E-Print Network [OSTI]

    Gilbert, David

    2009-01-01T23:59:59.000Z

    biofuels from lignocellulose will first require efficient infrastructure for feedstock production, harvest- ing, and transport.

  16. DOE Joint Genome Institute 2008 Progress Report

    E-Print Network [OSTI]

    Gilbert, David

    2009-01-01T23:59:59.000Z

    an emerging feed- stock for biodiesel production. Soybean iscenters on its use in biodiesel, a renewable alternativefor more than 80% of biodiesel production. The soybean

  17. Next Generation Climate Change Experiments Needed to Advance...

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Next Generation Climate Change Experiments Needed to Advance Knowledge and for Assessment of CMIP6 Re-direct Destination: The Aspen Global Change Institute hosted a technical...

  18. Endorser affiliations are for identification purposes only and do not reflect views of their academic institutions. October 18, 2013 Iowa Climate Statement 2013: A Rising Challenge to Iowa Agriculture

    E-Print Network [OSTI]

    Debinski, Diane M.

    gases. Climate change damages agriculture in additional ways. Intense rain events, the most notable is now increasingly threatened by rising greenhouse gas emissions and resulting climate change. Our climate has disrupted agricultural production profoundly during the past two years and is projected

  19. GOLD: The Genomes Online Database

    DOE Data Explorer [Office of Scientific and Technical Information (OSTI)]

    Kyrpides, Nikos; Liolios, Dinos; Chen, Amy; Tavernarakis, Nektarios; Hugenholtz, Philip; Markowitz, Victor; Bernal, Alex

    Since its inception in 1997, GOLD has continuously monitored genome sequencing projects worldwide and has provided the community with a unique centralized resource that integrates diverse information related to Archaea, Bacteria, Eukaryotic and more recently Metagenomic sequencing projects. As of September 2007, GOLD recorded 639 completed genome projects. These projects have their complete sequence deposited into the public archival sequence databases such as GenBank EMBL,and DDBJ. From the total of 639 complete and published genome projects as of 9/2007, 527 were bacterial, 47 were archaeal and 65 were eukaryotic. In addition to the complete projects, there were 2158 ongoing sequencing projects. 1328 of those were bacterial, 59 archaeal and 771 eukaryotic projects. Two types of metadata are provided by GOLD: (i) project metadata and (ii) organism/environment metadata. GOLD CARD pages for every project are available from the link of every GOLD_STAMP ID. The information in every one of these pages is organized into three tables: (a) Organism information, (b) Genome project information and (c) External links. [The Genomes On Line Database (GOLD) in 2007: Status of genomic and metagenomic projects and their associated metadata, Konstantinos Liolios, Konstantinos Mavromatis, Nektarios Tavernarakis and Nikos C. Kyrpides, Nucleic Acids Research Advance Access published online on November 2, 2007, Nucleic Acids Research, doi:10.1093/nar/gkm884]

    The basic tables in the GOLD database that can be browsed or searched include the following information:

    • Gold Stamp ID
    • Organism name
    • Domain
    • Links to information sources
    • Size and link to a map, when available
    • Chromosome number, Plas number, and GC content
    • A link for downloading the actual genome data
    • Institution that did the sequencing
    • Funding source
    • Database where information resides
    • Publication status and information

    (Specialized Interface)

  20. arthritis consortium genome-wide: Topics by E-print Network

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    study meta-analysis identifies 7 novel rheumatoid arthritis risk loci. Genetics and Genomics Branch, National Institute of Arthritis and Musculoskeletal and Skin Diseases, US...

  1. A General Equilibrium Analysis of Climate Policy for Aviation

    E-Print Network [OSTI]

    in Technology and Policy at the MASSACHUSETTS INSTITUTE OF TECHNOLOGY June 2011 c Massachusetts Institute Regulation of aviation's contribution to the global problem of climate change is in- creasingly likely

  2. Genomics and Systems Biology

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Genomics and Systems Biology LANL leads the world in computational finishing of microbial genomes Read caption + In 2013, Los Alamos scientist Richard Sayre and his team...

  3. Geoengineering the Earth's Climate

    ScienceCinema (OSTI)

    Google Tech Talks

    2009-09-01T23:59:59.000Z

    Emergency preparedness is generally considered to be a good thing, yet there is no plan regarding what we might do should we be faced with a climate emergency. Such an emergency could take the form of a rapid shift in precipitation patterns, a collapse of the great ice sheets, the imminent triggering of strong climate system feedbacks, or perhaps the loss of valuable ecosystems. Over the past decade, we have used climate models to investigate the potential to reverse some of the effects of greenhouse gases in the atmosphere by deflecting some incoming sunlight back to space. This would probably be most cost-effectively achieved with the placement of small particles in or above the stratosphere. Our model simulations indicate that such geoengineering approaches could potentially bring our climate closer to the state is was in prior to the introduction of greenhouse gases. This talk will present much of what is known about such geoengineering approaches, and raise a range of issues likely to stimulate lively discussion. Speaker: Ken Caldeira Ken Caldeira is a scientist at the Carnegie Institution Department of Global Ecology and a Professor (by courtesy) at the Stanford University Department of Environmental and Earth System Sciences. Previously, he worked for 12 years in the Energy and Environment Directorate at the Lawrence Livermore National Laboratory (Department of Energy). His research interests include the numerical simulation of Earth's climate, carbon, and biogeochemistry; ocean acidification; climate emergency response systems; evaluating approaches to supplying environmentally-friendly energy services; ocean carbon sequestration; long-term evolution of climate and geochemical cycles; and marine biogeochemical cycles. Caldeira has a B.A. in Philosophy from Rutgers College and an M.S. and Ph.D. in Atmospheric Sciences from New York University.

  4. Genomics and Bioinformatics Doug Brutlag

    E-Print Network [OSTI]

    IX #12;Genomics, Bioinformatics & Computational Biology Computational Biology Computational Molecular Biology BioinformaticsGenomics ProteomicsStructural Genomics #12;Genomics, Bioinformatics & Computational Biology Computational Biology Computational Molecular Biology BioinformaticsGenomics Proteomics

  5. Changing Climates 

    E-Print Network [OSTI]

    Wythe, Kathy

    2008-01-01T23:59:59.000Z

    and a wide range of academic areas are investigating the different compo- nents. More recently, they are taking information gleaned from the global climate models and applying them to research questions pertaining to Texas. Dr. Bruce Mc...Carl, Regents Professor of agricultural economics at Texas A&M University, has researched the economics of climate change for the last 20 years. McCarl, as a lead CHANGING CLIMATES tx H2O | pg. McCarl ] tx H2O | pg. 4 Changing Climates author...

  6. Discovery of functional elements in 12 Drosophila genomes using evolutionary

    E-Print Network [OSTI]

    Bartel, David

    ,6 , Joseph W. Carlson7 , Madeline A. Crosby8 , Matthew D. Rasmussen2 , Sushmita Roy9 , Ameya N. Deoras2 , J, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK. 6 Institute of Computer Science, University

  7. Discovery of functional elements in 12 Drosophila genomes using evolutionary

    E-Print Network [OSTI]

    Kellis, Manolis

    Parts5,6 , Joseph W. Carlson7 , Madeline A. Crosby8 , Matthew D. Rasmussen2 , Sushmita Roy9 , Ameya N, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK. 6 Institute of Computer Science, Un

  8. Whole Genome Sequencing of Individual Bacterial Cells from the Ocean

    SciTech Connect (OSTI)

    Malmstrom, Rex [DOE Joint Genome Institute

    2010-06-04T23:59:59.000Z

    Rex Malmstrom of the DOE Joint Genome Institute discusses single-cell sequencing of Prochlorococcus on June 4, 2010 at the "Sequencing, Finishing, Analysis in the Future" meeting in Santa Fe, NM

  9. Operational streamlining in a high-throughput genome sequencing center

    E-Print Network [OSTI]

    Person, Kerry P. (Kerry Patrick)

    2006-01-01T23:59:59.000Z

    Advances in medicine rely on accurate data that is rapidly provided. It is therefore critical for the Genome Sequencing platform of the Broad Institute of MIT and Harvard to continually strive to reduce cost, improve ...

  10. Operations capability improvement of a molecular biology laboratory in a high throughput genome sequencing center

    E-Print Network [OSTI]

    Vokoun, Matthew R. (Matthew Richard)

    2005-01-01T23:59:59.000Z

    The Broad Institute is a research collaboration of MIT, Harvard University and affiliated hospitals, and the Whitehead Institute for Biomedical Research. Its scientific mission is to "(1) create tools for genomic medicine ...

  11. INTRODUCTION TO GENOMIC MEDICINE

    E-Print Network [OSTI]

    INTRODUCTION TO GENOMIC MEDICINE Genomics play a role in 21st century research and clinical related to genomic medicine. Tentative Schedule: WHEN: WHERE: WHO CAN ATTEND? INTRODUCTION January 31 Implications of Genomics in Clinical Medicine February 7 Molecular Biology/Genetics Refresher - 1 February 14

  12. Personal Genomics, Personalized Medicine,

    E-Print Network [OSTI]

    Napp, Nils

    Personal Genomics, Personalized Medicine, & YOU Carrie Iwema, PhD, MLS 21st May 2012 AAAS/Science Translational Medicine panel discussion; MLA 2012 #12;Timeline: Human Genome Sequence HSLS, U.Pitt 1995 2014 2000 2003 2007 2007 2010 Human Genome Draft Sequence Complete Human Reference Genome Individual Human

  13. Comparative Genomics of Transcriptional Control in the Human Malaria Parasite Plasmodium falciparum

    E-Print Network [OSTI]

    Arnold, Jonathan

    Comparative Genomics of Transcriptional Control in the Human Malaria Parasite Plasmodium falciparum Richard M.R. Coulson,1,3 Neil Hall,2 and Christos A. Ouzounis1 1 Computational Genomics Group10 1SD, United Kingdom; 2 The Wellcome Trust Sanger Institute, The Wellcome Trust Genome Campus

  14. Improved Yield and Diverse Finished Bacterial Genomes using Pacific Biosciences RS II SMRT Sequencing

    E-Print Network [OSTI]

    Weber, David J.

    Improved Yield and Diverse Finished Bacterial Genomes using Pacific Biosciences RS II SMRT-Cruz, Alvaro Godinez, Luke J. Tallon Institute for Genome Sciences, University of Maryland School of Medicine, effective, and highly accurate platform for generation of complete microbial genome sequences. As early

  15. Genomic Advances to Improve Biomass for Biofuels (LBNL Science at the Theater)

    ScienceCinema (OSTI)

    Rokhsar, Daniel

    2011-04-28T23:59:59.000Z

    Lawrence Berkeley National Lab bioscientist Daniel Rokhsar discusses genomic advances to improve biomass for biofuels. He presented his talk Feb. 11, 2008 in Berkeley, California as part of Berkeley Lab's community lecture series. Rokhsar works with the U.S. Department of Energy's Joint Genome Institute and Berkeley Lab's Genomics Division.

  16. Communicating Coastal Risk Analysis in an Age of Climate Change

    E-Print Network [OSTI]

    Communicating Coastal Risk Analysis in an Age of Climate Change TR-11-04 Brian Blanton, John Mc in an Age of Climate Change Brian Blanton, John McGee, Oleg Kapeljushnik Renaissance Computing Institute of climate change complicates matters further. An immersive visualization environment integrating data from

  17. STATISTICS OF EXTREMES IN CLIMATE CHANGE Richard W. Katz

    E-Print Network [OSTI]

    Katz, Richard

    analysis available within the open source statistical programming language R. #12;2 OUTLINE Lecture 1 (9STATISTICS OF EXTREMES IN CLIMATE CHANGE Richard W. Katz Institute for Study of Society the application of the statistical theory of extreme values to climate, in general, and to climate change

  18. Will Climate Change Mathematics (?) Christopher K.R.T. Jones

    E-Print Network [OSTI]

    Will Climate Change Mathematics (?) Christopher K.R.T. Jones Warwick Mathematics Institute to climate change facing us are enormous and we will almost certainly have to harness all of our scienti complex calculations and predictions as are undertaken by the Intergovernmental Panel on Climate Change

  19. CLIMATE CHANGE AND U.S. AGRICULTURE: SOME FURTHER EVIDENCE

    E-Print Network [OSTI]

    McCarl, Bruce A.

    CLIMATE CHANGE AND U.S. AGRICULTURE: SOME FURTHER EVIDENCE R. M. Adams Oregon State University for the Electric Power Research Institute as part of the Agricultural Impacts Project of the Climate Change Impacts Program (CCIP). #12;1 CLIMATE CHANGE AND U.S. AGRICULTURE: SOME FURTHER EVIDENCE There have been a number

  20. Long-Term Climate Commitments Projected with ClimateCarbon Cycle Models G.-K. PLATTNER,a,n

    E-Print Network [OSTI]

    Stocker, Thomas

    Long-Term Climate Commitments Projected with Climate­Carbon Cycle Models G.-K. PLATTNER,a,n R IAC, ETH Zürich, Zürich, Switzerland c Potsdam Institute for Climate Impact Research, Potsdam, Germany of Earth and Ocean Sciences, University of Victoria, Victoria, British Columbia, Canada h The Open

  1. A Strategic Plan for Institutional Climate

    E-Print Network [OSTI]

    Escher, Christine

    .4.3 Emission Category Mitigation Strategies Air Travel Stationary Sources Purchased Electricity Ground #12;6 2. Definitions of Key Terms 1) "Carbon dioxide" (CO2) means the chemical compound containing one atom of carbon and two atoms of oxygen. 2) "Carbon dioxide equivalent" (CO2e) represents

  2. Global Climate Change Institute | Open Energy Information

    Open Energy Info (EERE)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative Fuels Data Center Home Page onYou are now leaving Energy.gov You are now leaving Energy.gov You are being directedAnnual SiteofEvaluating AGeothermal/Exploration <Glacial Energy HoldingsGlacialReport

  3. The Institute for Genomic Biology at the University of Illinois at Urbana-Champaign offers a number of postdoctoral fellowships for talented young scholars. IGB Fellows spend two to three years doing collaborative and independent research in one of severa

    E-Print Network [OSTI]

    Ha, Taekjip

    on the development of second- generation biofuels intended to significantly slow the rate of global climate change services provided by new sustainable biofuel crops. The full range of research can be seen at www to understanding and developing opportunities for improv- ing sustainable biofuel production. Research can

  4. 10. international mouse genome conference

    SciTech Connect (OSTI)

    Meisler, M.H.

    1996-12-31T23:59:59.000Z

    Ten years after hosting the First International Mammalian Genome Conference in Paris in 1986, Dr. Jean-Louis Guenet presided over the Tenth Conference at the Pasteur Institute, October 7--10, 1996. The 1986 conference was a satellite to the Human Gene Mapping Workshop and had approximately 50 attendees. The 1996 meeting was attended by 300 scientists from around the world. In the interim, the number of mapped loci in the mouse increased from 1,000 to over 20,000. This report contains a listing of the program and its participants, and two articles that review the meeting and the role of the laboratory mouse in the Human Genome project. More than 200 papers were presented at the conference covering the following topics: International mouse chromosome committee meetings; Mutant generation and identification; Physical and genetic maps; New technology and resources; Chromatin structure and gene regulation; Rate and hamster genetic maps; Informatics and databases; and Quantitative trait analysis.

  5. Long-Term Climate Change Commitment and Reversibility: An EMIC Intercomparison KIRSTEN ZICKFELD,a

    E-Print Network [OSTI]

    Matsumoto, Katsumi

    Long-Term Climate Change Commitment and Reversibility: An EMIC Intercomparison KIRSTEN ZICKFELD. Obukhov Institute of Atmospheric Physics, RAS, Moscow, Russia f Potsdam Institute for Climate Impact of Intermediate Complexity (EMICs) undertaken in support of the Intergovernmental Panel on Climate Change (IPCC

  6. Climate Systems and Climate Change Is Climate Change Real?

    E-Print Network [OSTI]

    Pan, Feifei

    Chapter 10 Climate Systems and Climate Change #12;Is Climate Change Real? 1980 1898 2005 2003 #12;Arctic Sea Ice Changes #12;Observed Global Surface Air Temperature #12;! Current climate: weather station data, remote sensing data, numerical modeling using General Circulation Models (GCM) ! Past climate

  7. A Right to Enjoy Culture in Face of Climate Change: Implications for “Climate Migrants”

    E-Print Network [OSTI]

    Wewerinke, Margaretha

    sustainability while allowing for global economic development. This includes strategies for carbon emissions reduction, sequestration of carbon in vegetation and improved resilience of the built environment, economies and social institutions to climate impacts...

  8. DANISH METEOROLOGICAL INSTITUTE ----------SCIENTIFIC REPORT ----------

    E-Print Network [OSTI]

    Environmental Problems, Kola Science Center, Apatity, 184200, Russia 6 Geophysical Institute, Department for a peer-reviewed publication. In this project, to understand the factors driving climate and ecosystem changes in the Arctic regions we considered sources, correlation and trends for different anthropogenic

  9. Defining Genome Project Standards in a New Era of Sequencing (GSC8 Meeting)

    ScienceCinema (OSTI)

    Chain, Patrick [DOE JGI

    2011-04-28T23:59:59.000Z

    The Genomic Standards Consortium was formed in September 2005. It is an international, open-membership working body which promotes standardization in the description of genomes and the exchange and integration of genomic data. The 2009 meeting was an activity of a five-year funding "Research Coordination Network" from the National Science Foundation and was organized held at the DOE Joint Genome Institute with organizational support provided by the JGI and by the University of California - San Diego.

  10. Defining Genome Project Standards in a New Era of Sequencing (GSC8 Meeting)

    SciTech Connect (OSTI)

    Chain, Patrick [DOE JGI] [DOE JGI

    2009-09-09T23:59:59.000Z

    The Genomic Standards Consortium was formed in September 2005. It is an international, open-membership working body which promotes standardization in the description of genomes and the exchange and integration of genomic data. The 2009 meeting was an activity of a five-year funding "Research Coordination Network" from the National Science Foundation and was organized held at the DOE Joint Genome Institute with organizational support provided by the JGI and by the University of California - San Diego.

  11. Genomics and the human genome project: implications for psychiatry

    E-Print Network [OSTI]

    Kelsoe, J R

    2004-01-01T23:59:59.000Z

    and psychosis: a convergent functional genomics approach.Physiology & Genomics, 4, 83–91. O LIPHANT , A. , B ARKER ,2004), 16(4), 294–300 Genomics and the Human Genome Project:

  12. Metagenomic and Metaproteomic Analyses of Symbioses between Bacteria and Gutless Marine Worms (2014 DOE JGI Genomics of Energy & Environment Meeting)

    SciTech Connect (OSTI)

    Dubilier, Nicole [Max Planck Institute

    2014-03-19T23:59:59.000Z

    Nicole Dubilier of the Max Planck Institute speaks at the 9th Annual Genomics of Energy & Environment Meeting on March 20, 2014 in Walnut Creek, Calif.

  13. Climate Change Adaptation New Perspectives for Natural Resource Management and Conservation1

    E-Print Network [OSTI]

    Mazzotti, Frank

    Climate Change Adaptation New Perspectives for Natural Resource Management and Conservation1 Institute of Food and Agricultural Sciences February 2012 A Changing Climate for Conservation Climate change species of plants and animals are already shifting their distributions in response to climate change

  14. Genomics of Extinct and Endangered Species (2011 JGI User Meeting)

    SciTech Connect (OSTI)

    Shuster, Stephen [Penn State University] [Penn State University

    2011-03-23T23:59:59.000Z

    The U.S. Department of Energy Joint Genome Institute (JGI) invited scientists interested in the application of genomics to bioenergy and environmental issues, as well as all current and prospective users and collaborators, to attend the annual DOE JGI Genomics of Energy & Environment Meeting held March 22-24, 2011 in Walnut Creek, Calif. The emphasis of this meeting was on the genomics of renewable energy strategies, carbon cycling, environmental gene discovery, and engineering of fuel-producing organisms. The meeting features presentations by leading scientists advancing these topics. Stephen Shuster of Penn State University gives a presentation on "Genomics of Extinct and Endangered Species" at the 6th annual Genomics of Energy & Environment Meeting on March 23, 2011

  15. Genomic Speciation and Adaptation in Aquilegia (2011 JGI User Meeting)

    SciTech Connect (OSTI)

    Hodges, Scott [University of California, Santa Barbara] [University of California, Santa Barbara

    2011-03-23T23:59:59.000Z

    The U.S. Department of Energy Joint Genome Institute (JGI) invited scientists interested in the application of genomics to bioenergy and environmental issues, as well as all current and prospective users and collaborators, to attend the annual DOE JGI Genomics of Energy & Environment Meeting held March 22-24, 2011 in Walnut Creek, Calif. The emphasis of this meeting was on the genomics of renewable energy strategies, carbon cycling, environmental gene discovery, and engineering of fuel-producing organisms. The meeting features presentations by leading scientists advancing these topics. Scott Hodges of the University of California, Santa Barbara gives a presentation on "Genomic Speciation and Adaptation in Aquilegia" at the 6th annual Genomics of Energy & Environment Meeting on March 23, 2011

  16. Genomic Speciation and Adaptation in Aquilegia (2011 JGI User Meeting)

    ScienceCinema (OSTI)

    Hodges, Scott [University of California, Santa Barbara

    2011-06-03T23:59:59.000Z

    The U.S. Department of Energy Joint Genome Institute (JGI) invited scientists interested in the application of genomics to bioenergy and environmental issues, as well as all current and prospective users and collaborators, to attend the annual DOE JGI Genomics of Energy & Environment Meeting held March 22-24, 2011 in Walnut Creek, Calif. The emphasis of this meeting was on the genomics of renewable energy strategies, carbon cycling, environmental gene discovery, and engineering of fuel-producing organisms. The meeting features presentations by leading scientists advancing these topics. Scott Hodges of the University of California, Santa Barbara gives a presentation on "Genomic Speciation and Adaptation in Aquilegia" at the 6th annual Genomics of Energy & Environment Meeting on March 23, 2011

  17. Genomics of Extinct and Endangered Species (2011 JGI User Meeting)

    ScienceCinema (OSTI)

    Shuster, Stephen [Penn State University

    2011-06-03T23:59:59.000Z

    The U.S. Department of Energy Joint Genome Institute (JGI) invited scientists interested in the application of genomics to bioenergy and environmental issues, as well as all current and prospective users and collaborators, to attend the annual DOE JGI Genomics of Energy & Environment Meeting held March 22-24, 2011 in Walnut Creek, Calif. The emphasis of this meeting was on the genomics of renewable energy strategies, carbon cycling, environmental gene discovery, and engineering of fuel-producing organisms. The meeting features presentations by leading scientists advancing these topics. Stephen Shuster of Penn State University gives a presentation on "Genomics of Extinct and Endangered Species" at the 6th annual Genomics of Energy & Environment Meeting on March 23, 2011

  18. Financial Institutions

    Broader source: Energy.gov [DOE]

    A lending program begins with a financial institution that procures the funds they lend from a number of other sources.

  19. Climate Engineering Responses to Climate Emergencies

    E-Print Network [OSTI]

    Battisti, David

    Novim Climate Engineering Responses to Climate Emergencies Jason J. Blackstock David S. Battisti Santa Barbara, California #12;Climate Engineering Responses to Climate Emergencies This report should, A. A. N. Patrinos, D. P. Schrag, R. H. Socolow and S. E. Koonin, Climate Engineering Responses

  20. Improving the Simulation of the West African Monsoon Using the MIT Regional Climate Model

    E-Print Network [OSTI]

    Im, Eun-Soon

    This paper presents an evaluation of the performance of the Massachusetts Institute of Technology (MIT) regional climate model (MRCM) in simulating the West African monsoon. The MRCM is built on the Regional Climate Model, ...

  1. "Managing Department Climate Change"

    E-Print Network [OSTI]

    Sheridan, Jennifer

    "Managing Department Climate Change" #12;Presenters · Ronda Callister Professor, Department Department Climate? · Assesment is essential for determining strategies for initiating change · In a research climate · Each panelist will describe an intervention designed to improve department climate ­ Ronda

  2. Changing Climates

    E-Print Network [OSTI]

    Wythe, Kathy

    2008-01-01T23:59:59.000Z

    these data with predictions from the IPCC. Professor of geography at Texas State University, Dr. David Butler, does climate change research mainly in the Rocky Moun- tains with U.S. Geological Survey funding. He has also done research on how climate...://wiid.twdb.state.tx.us Detailed information about individual water wells. This system uses a geographic information system-based tool to show locations of water wells and download data on water levels and water quality. Reports that were developed about on-site conditions...

  3. Connecting Genomic Alterations to Cancer Biology with Proteomics: The NCI Clinical Proteomic Tumor Analysis Consortium

    SciTech Connect (OSTI)

    Ellis, Matthew; Gillette, Michael; Carr, Steven A.; Paulovich, Amanda G.; Smith, Richard D.; Rodland, Karin D.; Townsend, Reid; Kinsinger, Christopher; Mesri, Mehdi; Rodriguez, Henry; Liebler, Daniel

    2013-10-03T23:59:59.000Z

    The National Cancer Institute (NCI) Clinical Proteomic Tumor Analysis Consortium is applying the latest generation of proteomic technologies to genomically annotated tumors from The Cancer Genome Atlas (TCGA) program, a joint initiative of the NCI and the National Human Genome Research Institute. By providing a fully integrated accounting of DNA, RNA, and protein abnormalities in individual tumors, these datasets will illuminate the complex relationship between genomic abnormalities and cancer phenotypes, thus producing biologic insights as well as a wave of novel candidate biomarkers and therapeutic targets amenable to verifi cation using targeted mass spectrometry methods.

  4. Climate Change, Adaptation, and Development

    E-Print Network [OSTI]

    Cole, Daniel H.

    2008-01-01T23:59:59.000Z

    Climate Change, Adaptation, and Development Daniel H. Cole*THE COSTS OF CLIMATE CHANGE . ADAPTATIONCONVENTION ON CLIMATE CHANGE . IV. A.

  5. Phylogenetic Inference Using Whole Genomes

    E-Print Network [OSTI]

    Phylogenetic Inference Using Whole Genomes Bruce Rannala1 and Ziheng Yang2 1 Genome Center.yang@ucl.ac.uk Annu. Rev. Genomics Hum. Genet. 2008. 9:217­31 First published online as a Review in Advance on June 3, 2008 The Annual Review of Genomics and Human Genetics is online at genom.annualreviews.org This article

  6. Sandia National Laboratories: Climate Security

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    MonitoringClimate Security Climate Security Climate Security Global reductions in greenhouse gases will eventually be motivated by an international climate treaty and will entail...

  7. Genome Science/Technologies

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    McDonald Bioscience Communications Email State-of-the art technology and extensive genomics expertise Protein research Read caption + Los Alamos National Laboratory graduate...

  8. Fungal Genomics Program

    SciTech Connect (OSTI)

    Grigoriev, Igor

    2012-03-12T23:59:59.000Z

    The JGI Fungal Genomics Program aims to scale up sequencing and analysis of fungal genomes to explore the diversity of fungi important for energy and the environment, and to promote functional studies on a system level. Combining new sequencing technologies and comparative genomics tools, JGI is now leading the world in fungal genome sequencing and analysis. Over 120 sequenced fungal genomes with analytical tools are available via MycoCosm (www.jgi.doe.gov/fungi), a web-portal for fungal biologists. Our model of interacting with user communities, unique among other sequencing centers, helps organize these communities, improves genome annotation and analysis work, and facilitates new larger-scale genomic projects. This resulted in 20 high-profile papers published in 2011 alone and contributing to the Genomics Encyclopedia of Fungi, which targets fungi related to plant health (symbionts, pathogens, and biocontrol agents) and biorefinery processes (cellulose degradation, sugar fermentation, industrial hosts). Our next grand challenges include larger scale exploration of fungal diversity (1000 fungal genomes), developing molecular tools for DOE-relevant model organisms, and analysis of complex systems and metagenomes.

  9. Webinar: Materials Genome Initative

    Broader source: Energy.gov [DOE]

    Audio recording and text version of the Fuel Cell Technologies Office webinar titled "Materials Genome Initiative," originally presented on December 2, 2014.

  10. Climate Change Scoping Plan

    E-Print Network [OSTI]

    Climate Change Scoping Plan a amework for change Prepared by the California Air Resources BoardBackgroundBackgroundBackground ............................................................................................................................................................................................................................................................................................................................................................................................................ 4444 1. Climate Change Policy in California1. Climate Change Policy in California1. Climate Change Policy in California1. Climate Change Policy in California

  11. Climate Change Scoping Plan

    E-Print Network [OSTI]

    Climate Change Scoping Plan a amework for change as approved Prepared by the California AirBackgroundBackgroundBackground ............................................................................................................................................................................................................................................................................................................................................................................................................ 4444 1. Climate Change Policy in California1. Climate Change Policy in California1. Climate Change Policy in California1. Climate Change Policy in California

  12. Climate change action plan

    E-Print Network [OSTI]

    Delivery Climate change action plan 2009-2011 #12;2 | Climate change action plan ©istockphoto.com #12;Climate Change Action Plan Climate change action plan | 3 Contents Overview 4 Preface and Introduction 5 Climate change predictions for Scotland 6 The role of forestry 7 Protecting and managing

  13. Genomic analysis of mouse tumorigenesis

    E-Print Network [OSTI]

    Tam, Mandy Chi-Mun

    2006-01-01T23:59:59.000Z

    The availability of the human and mouse genome sequences has spurred a growing interest in analyzing mouse models of human cancer using genomic techniques. Comparative genomic studies on mouse and human tumors can be ...

  14. Enhancer Identification through Comparative Genomics

    E-Print Network [OSTI]

    Visel, Axel; Bristow, James; Pennacchio, Len A.

    2006-01-01T23:59:59.000Z

    through Comparative Genomics Axel Visel, James Bristow andWalnut Creek, CA 94598 USA. Genomics Division, MS 84-171,Len A. Pennacchio, Genomics Division, One Cyclotron Road, MS

  15. Linking local air pollution to global chemistry and climate

    E-Print Network [OSTI]

    Mayer, Monika.; Wang, Chien.; Webster, Mort David.; Prinn, Ronald G.

    We have incorporated a reduced-form urban air chemistry model in MIT's 2D-LO coupled chemistry-climate model. The computationally efficient reduced-form urban model is derived from the California Institute of Technology-Carnegie ...

  16. Climate Past, Climate Present, Climate Future Douglas Nychka,

    E-Print Network [OSTI]

    Nychka, Douglas

    series and an energy balance model. 1000 1200 1400 1600 1800 2000 -1.5-1.0-0.50.00.5 Year Degree. Supported by US NSF 7th World Congress Prob. and Stat., Singapore July 2008 #12;What is climate? Climate will use statistics to talk about the "known un- knowns" for the Earth's climate Statistics uses

  17. Probabilistic Forecast for Twenty-First-Century Climate Based on Uncertainties in Emissions (Without Policy) and Climate Parameters

    E-Print Network [OSTI]

    Jacoby, Henry D.

    The Massachusetts Institute of Technology (MIT) Integrated Global System Model is used to make probabilistic projections of climate change from 1861 to 2100. Since the model’s first projections were published in 2003, ...

  18. Evolutionary Genomics of Salmonella enterica Subspecies

    E-Print Network [OSTI]

    2013-01-01T23:59:59.000Z

    M. 2013. Evolutionary genomics of Salmonella entericaEvolutionary Genomics of Salmonella enterica Subspecies

  19. Climate Action Plan (Delaware)

    Broader source: Energy.gov [DOE]

    To better understand the current and future vulnerabilities and risks to climate change, DNREC Secretary Collin O’Mara directed the Division of Energy and Climate to conduct a statewide climate...

  20. Climate Data Operators (CDO)

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Climate Data Operators (CDO) Climate Data Operators (CDO) Description and Overview CDO is a large tool set for working on climate data. NetCDF 34, GRIB including SZIP compression,...

  1. Protecting climate with forests.

    E-Print Network [OSTI]

    2008-01-01T23:59:59.000Z

    Changing feedbacks in the climate–biosphere system Front.313–32 Bonan G B 2008 Forests and climate change: forcings,feedbacks, and the climate benefits of forests Science

  2. Climate Code Foundation

    E-Print Network [OSTI]

    Barnes, Nick; Jones, David

    2011-07-05T23:59:59.000Z

    Climate Code Foundation - who are we? A non-profit organisation founded in August 2010; our goal is to promote the public understanding of climate science, by increasing the visibility and clarity of the software used in climate science...

  3. National Environmental Research Institute Ministry of the Environment . Denmark

    E-Print Network [OSTI]

    Inventories Denmark's National Inventory Report 2005 Submitted under the United Nations Framework Convention Research Institute Ministry of the Environment . Denmark Emission Inventories Denmark's National Inventory's National Inventory Report 2005 - Submitted under the United Nations Framework Convention on Climate Change

  4. Complete Genome Sequence of the Thermophilic, Piezophilic, Heterotrophic Bacterium Marinitoga piezophila KA3

    SciTech Connect (OSTI)

    Lucas, Susan [U.S. Department of Energy, Joint Genome Institute; Han, James [U.S. Department of Energy, Joint Genome Institute; Lapidus, Alla L. [U.S. Department of Energy, Joint Genome Institute; Cheng, Jan-Fang [U.S. Department of Energy, Joint Genome Institute; Goodwin, Lynne A. [Los Alamos National Laboratory (LANL); Pitluck, Sam [U.S. Department of Energy, Joint Genome Institute; Peters, Lin [U.S. Department of Energy, Joint Genome Institute; Mikhailova, Natalia [U.S. Department of Energy, Joint Genome Institute; Teshima, Hazuki [Los Alamos National Laboratory (LANL); Detter, J. Chris [U.S. Department of Energy, Joint Genome Institute; Han, Cliff [Los Alamos National Laboratory (LANL); Tapia, Roxanne [Los Alamos National Laboratory (LANL); Land, Miriam L [ORNL; Hauser, Loren John [ORNL; Kyrpides, Nikos C [U.S. Department of Energy, Joint Genome Institute; Ivanova, N [U.S. Department of Energy, Joint Genome Institute; Pagani, Ioanna [U.S. Department of Energy, Joint Genome Institute; Vannier, Pauline [Ifremer, Plouzane, France; Oger, Phil [University of Lyon, France; Bartlett, Douglas [University of California, San Diego & La Jolla; Noll, Kenneth M [University of Connecticut, Storrs; Woyke, Tanja [U.S. Department of Energy, Joint Genome Institute; Jebbar, Mohamed [Ifremer, Plouzane, France

    2012-01-01T23:59:59.000Z

    Marinitoga piezophila KA3 is a thermophilic, anaerobic, chemoorganotrophic, sulfur-reducing bacterium isolated from the Grandbonum deep-sea hydrothermal vent site at the East Pacific Rise (13 degrees N, 2,630-m depth). The genome of M. piezophila KA3 comprises a 2,231,407-bp circular chromosome and a 13,386-bp circular plasmid. This genome was sequenced within Department of Energy Joint Genome Institute CSP 2010.

  5. FY08 LDRD Final Report Regional Climate

    SciTech Connect (OSTI)

    Bader, D C; Chin, H; Caldwell, P M

    2009-05-19T23:59:59.000Z

    An integrated, multi-model capability for regional climate change simulation is needed to perform original analyses to understand and prepare for the impacts of climate change on the time and space scales that are critical to California's future environmental quality and economic prosperity. Our intent was to develop a very high resolution regional simulation capability to address consequences of climate change in California to complement the global modeling capability that is supported by DOE at LLNL and other institutions to inform national and international energy policies. The California state government, through the California Energy Commission (CEC), institutionalized the State's climate change assessment process through its biennial climate change reports. The bases for these reports, however, are global climate change simulations for future scenarios designed to inform international policy negotiations, and are primarily focused on the global to continental scale impacts of increasing emissions of greenhouse gases. These simulations do not meet the needs of California public and private officials who will make major decisions in the next decade that require an understanding of climate change in California for the next thirty to fifty years and its effects on energy use, water utilization, air quality, agriculture and natural ecosystems. With the additional development of regional dynamical climate modeling capability, LLNL will be able to design and execute global simulations specifically for scenarios important to the state, then use those results to drive regional simulations of the impacts of the simulated climate change for regions as small as individual cities or watersheds. Through this project, we systematically studied the strengths and weaknesses of downscaling global model results with a regional mesoscale model to guide others, particularly university researchers, who are using the technique based on models with less complete parameterizations or coarser spatial resolution. Further, LLNL has now built a capability in state-of-the-science mesoscale climate modeling that complements that which it has in global climate simulation, providing potential sponsors with an end-to-end simulation and analysis program.

  6. Climate VISION: Contact Us

    Office of Scientific and Technical Information (OSTI)

    of Energy Office of Climate Change Policy and Technology (PI-50) 202-586-8339 Mining - Contacts Association Climate VISION Lead Constance Holmes Senior Economist, Director...

  7. Sandia National Laboratories: Climate

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Climate A Model for the Nation: Promoting Education and Innovation in Vermont's Electricity Sector On May 8, 2012, in Climate, Customers & Partners, Energy, Energy Surety,...

  8. Climate Action Plan (Montana)

    Broader source: Energy.gov [DOE]

    Recognizing the profound implications that global warming and climate variation could have on the economy, environment and quality of life in Montana, the Climate Change Advisory Committee (CCAC)...

  9. Climate change cripples forests

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Climate change cripples forests Climate change cripples forests A team of scientists concluded that in the warmer and drier Southwest of the near future, widespread tree mortality...

  10. Climate change cripples forests

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Climate Change Cripples Forests Climate change cripples forests A team of scientists concluded that in the warmer and drier Southwest of the near future, widespread tree mortality...

  11. Climate Change Response

    Office of Energy Efficiency and Renewable Energy (EERE) Indexed Site

    the Interior Climate Change Response "From the Everglades to the Great Lakes to Alaska and everywhere in between, climate change is a leading threat to natural and cultural...

  12. InStItut De reCHerCHe pour le DVeloppeMent Institut de recherche pour le dveloppement

    E-Print Network [OSTI]

    , the Institute is reinforcing its role as a motivating force for research in the South. Climate change in Bondy and Montpellier, we are active in over fifty countries, in Africa, around the Mediterranean basin

  13. Tackling the Triple-Threat Genome of Miscanthus x giganteus (2010 JGI User Meeting)

    ScienceCinema (OSTI)

    Moose, Steve

    2011-04-25T23:59:59.000Z

    Steve Moose from the University of Illinois at Urbana-Champaign and the Energy Biosciences Institute on "Tackling the Triple-Threat Genome of Miscanthus x giganteus" on March 25, 2010 at the 5th Annual DOE JGI User Meeting

  14. Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species

    E-Print Network [OSTI]

    2013-01-01T23:59:59.000Z

    for Bioinformatics and Computational Biology, University of95616, USA. 2 Computational Biology and Bioinformatics, YaleBioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK. 31 Computational Biology &

  15. Comparative genomics of the core and accessory genomes of 48 Sinorhizobium strains comprising five genospecies

    E-Print Network [OSTI]

    2013-01-01T23:59:59.000Z

    annotation and comparative genomics. Database (Oxford) 2009,et al. : Comparative genomics of the core and accessoryComparative genomics of the core and accessory genomes of 48

  16. The genomic impact of 100 million years of social evolution in seven

    E-Print Network [OSTI]

    Alvarez, Nadir

    The genomic impact of 100 million years of social evolution in seven ant species Ju¨ rgen Gadau1, Switzerland Vital-IT Group, Swiss Institute of Bioinformatics, 1015 Lausanne, Switzerland, School in terms of both their geographic distribution and species number. The publi- cation of seven ant genomes

  17. Towards the Perfect Genome Sequence (Opening Keynote) ( 7th Annual SFAF Meeting, 2012)

    ScienceCinema (OSTI)

    Weinstock, George [Washington University

    2013-03-22T23:59:59.000Z

    George Weinstock, associate director at the Genome Institute at Washington University, delivered the opening keynote "Towards the Perfect Genome Sequence" at the 2012 Sequencing, Finishing, Analysis in the Future Meeting held June 5-7, 2012 in Santa Fe, New Mexico.

  18. Bionimbus: a cloud for managing, analyzing and sharing large genomics datasets

    E-Print Network [OSTI]

    Grossman, Robert

    Bionimbus: a cloud for managing, analyzing and sharing large genomics datasets Allison P Heath,1 Megan E McNerney,1,2 Kevin P White,1,3,4 Robert L Grossman1,3,5 1 Institute for Genomics and Systems petabyte-scale cloud- based computing platforms containing these data, along with tools and resources

  19. Update on Genomic Studies of Algae Paths toward Algal Genomics

    E-Print Network [OSTI]

    Update on Genomic Studies of Algae Paths toward Algal Genomics Arthur R. Grossman* The Carnegie of genomic information that is being used to help researchers understand the gene content of organisms, how the expression of genes. In this introductory manuscript, I discuss select algae and how genomics is impacting

  20. Comparative and Functional Genomics Comp Funct Genom 2003; 4: 239245.

    E-Print Network [OSTI]

    Wurtele, Eve Syrkin

    Comparative and Functional Genomics Comp Funct Genom 2003; 4: 239­245. Published online 1 April://www.botany.iastate.edu/mash/metnetex/metabolicnetex.html) is pub- licly available software in development for analysis of genome-wide RNA, protein and metabolite in the post-genome era is to understand how interactions among molecules in a cell determine its form

  1. Comparative and Functional Genomics Comp Funct Genom 2003; 4: 3136.

    E-Print Network [OSTI]

    Allen, John F.

    Comparative and Functional Genomics Comp Funct Genom 2003; 4: 31­36. Published online in Wiley and mitochondria contain genomes John F. Allen* Plant Biochemistry, Center for Chemistry and Chemical Engineering that the nucleotide sequences of mitochondrial and chloroplast genomes would provide the answer has proved unfounded

  2. Fuzzy Genome Sequence Assembly for Single and Environmental Genomes

    E-Print Network [OSTI]

    Nicolescu, Monica

    Fuzzy Genome Sequence Assembly for Single and Environmental Genomes Sara Nasser, Adrienne Breland. Traditional methods obtain a microorganism's DNA by culturing it in- dividually. Recent advances in genomics microbial commu- nities are often very complex with tens and hundreds of species. Assembling these genomes

  3. EXTENDING THE CONCEPTS OF RETURN PERIOD AND RETURN LEVEL TO A CHANGING CLIMATE

    E-Print Network [OSTI]

    Katz, Richard

    -Stationarity in Extremes (3) Risk Communication under Stationarity (4) Risk Communication under Climate Change (5;#12;(4) Risk Communication Under Climate Change · One Approach -- "Effective" return level Permit "return levelEXTENDING THE CONCEPTS OF RETURN PERIOD AND RETURN LEVEL TO A CHANGING CLIMATE Rick Katz Institute

  4. You are invited to an Informational Hearing. THE CLIMATE CHANGE CRISIS...

    E-Print Network [OSTI]

    Kammen, Daniel M.

    will climate change affect air quality and public health? What will happen to the agriculture, fishingYou are invited to an Informational Hearing. THE CLIMATE CHANGE CRISIS... CAN CALIFORNIA CREATE known about climate change. Environmental leader Global Green USA as well as Pacific Institute and Union

  5. RESEARCH ARTICLE Impacts of changing climate and land use on vegetation

    E-Print Network [OSTI]

    Bern, Universität

    RESEARCH ARTICLE Impacts of changing climate and land use on vegetation dynamics in a Mediterranean coast and in regions that are expected to experience a mediterranean-type climate in the future. Samartin Á O. Heiri Á W. Tinner Institute of Plant Sciences and Oeschger Centre for Climate Change Research

  6. IMPACT OF CLIMATE CHANGE ON GROUNDWATER RESOURCES R. D. Singh & C. P. Kumar

    E-Print Network [OSTI]

    Kumar, C.P.

    of groundwater recharge. A number of Global Climate Models (GCM) are available for understanding climate; Numerical modeling; MODFLOW; UnSat Suite; WetSpass. Introduction Water is indispensable for life, but itsIMPACT OF CLIMATE CHANGE ON GROUNDWATER RESOURCES R. D. Singh & C. P. Kumar National Institute

  7. IDENTIFYING AND OVERCOMING BARRIERS TO CLIMATE CHANGE

    E-Print Network [OSTI]

    Case Studies A White Paper from the California Energy Commission's California Climate Change Center and for policy-makers. To fulfill these goals, an in-depth study of five California case studies in the San, but still very limited activities in the case studies. Institutional and attitudinal barriers dominate

  8. Anticipating Stream Ecosystem Responses to Climate Change

    E-Print Network [OSTI]

    Crosby, Benjamin T.

    Anticipating Stream Ecosystem Responses to Climate Change: Toward Predictions that Incorporate, Pocatello, Idaho 83209, USA; 2 Cary Institute of Ecosystem Studies, Millbrook, New York 12545, USA; 3, and debris flows) and shift distributions of terrestrial ecosystems on a global basis. Although

  9. Human Genome Program

    SciTech Connect (OSTI)

    Not Available

    1993-01-01T23:59:59.000Z

    The DOE Human Genome program has grown tremendously, as shown by the marked increase in the number of genome-funded projects since the last workshop held in 1991. The abstracts in this book describe the genome research of DOE-funded grantees and contractors and invited guests, and all projects are represented at the workshop by posters. The 3-day meeting includes plenary sessions on ethical, legal, and social issues pertaining to the availability of genetic data; sequencing techniques, informatics support; and chromosome and cDNA mapping and sequencing.

  10. The Center for integrative genomics

    E-Print Network [OSTI]

    Kaessmann, Henrik

    The Center for integrative genomics Report 2005­2006 #12;Presentation Director's message 4 Scientific advisory committee 6 Organigram of the CIG 7 research The structure and function of genomes and their evolution alexandrereymond ­ Genome structure and expression 10 henrikKaessmann ­ Evolutionary genomics 12

  11. Haskell Indian Nations University Roundtable: Increased Productions of Traditional and Other Foods in an Era of Abrupt Climate Change

    Office of Energy Efficiency and Renewable Energy (EERE)

    Hosted by the Haskell Indian University International Institute for Indigenous Resource Management and Indigenous Peoples Climate Change Working Group, this roundtable discussion will identify and...

  12. Climate Leadership Conference

    Broader source: Energy.gov [DOE]

    Hosted and organized by the Association of Climate Change Officers (ACCO), Center for Climate and Energy Solutions (C2ES), and the Climate Registry, the three-day conference will showcase how new business opportunities, current policies, technologies, climate solutions and energy transformation will drive our low-carbon future.

  13. programs in climate change

    E-Print Network [OSTI]

    existing programs in climate change science and infrastructure. The Laboratory has a 15- year history in climate change science. The Climate, Ocean and Sea Ice Modeling (COSIM) project develops and maintains advanced numerical models of the ocean, sea ice, and ice sheets for use in global climate change

  14. Genomic and Systems Biology Analyses of Social Behavior or Evolutionary Genomic Analyses of Insect Society: Eat, Drink, and Be Scary (2011 JGI User Meeting)

    SciTech Connect (OSTI)

    Robinson, Gene

    2011-03-23T23:59:59.000Z

    The U.S. Department of Energy Joint Genome Institute (JGI) invited scientists interested in the application of genomics to bioenergy and environmental issues, as well as all current and prospective users and collaborators, to attend the annual DOE JGI Genomics of Energy & Environment Meeting held March 22-24, 2011 in Walnut Creek, Calif. The emphasis of this meeting was on the genomics of renewable energy strategies, carbon cycling, environmental gene discovery, and engineering of fuel-producing organisms. The meeting features presentations by leading scientists advancing these topics. Gene Robinson of the University of Illinois on "Genomic and Systems Biology Analyses of Social Behavior" at the 6th Annual Genomics of Energy & Environment Meeting on March 23, 2011

  15. Genomic and Systems Biology Analyses of Social Behavior or Evolutionary Genomic Analyses of Insect Society: Eat, Drink, and Be Scary (2011 JGI User Meeting)

    ScienceCinema (OSTI)

    Robinson, Gene

    2011-06-03T23:59:59.000Z

    The U.S. Department of Energy Joint Genome Institute (JGI) invited scientists interested in the application of genomics to bioenergy and environmental issues, as well as all current and prospective users and collaborators, to attend the annual DOE JGI Genomics of Energy & Environment Meeting held March 22-24, 2011 in Walnut Creek, Calif. The emphasis of this meeting was on the genomics of renewable energy strategies, carbon cycling, environmental gene discovery, and engineering of fuel-producing organisms. The meeting features presentations by leading scientists advancing these topics. Gene Robinson of the University of Illinois on "Genomic and Systems Biology Analyses of Social Behavior" at the 6th Annual Genomics of Energy & Environment Meeting on March 23, 2011

  16. Saint Joseph's University Institute for Environmental Stewardship

    SciTech Connect (OSTI)

    McCann, Michael P; Springer, Clint

    2013-10-15T23:59:59.000Z

    Task A: Examination of the physiological, morphological, and reproductive responses of Panicum virgatum (switchgrass) cultivars identified as potential biofuel producing cultivars as well as naturally-occurring varieties of switchgrass to projected changes in climate for the central portion of the United States. This project was a multi-year project set in a field site located at the Konza Prairie Biological Station near Manhattan, KS USA. At the field site we planted switchgrass collected from regions in Kansas, Oklahoma, and Texas. After a year of establishment we implemented a set of two-year water treatments that examined the responses in physiology, growth and development of switchgrass to predicted changes in precipitation amount for the central United States. After this experiment was completed we performed a second set of experiments that examined the responses of switchgrass physiology, growth, and development to changes in precipitation frequency. We also included in this analysis how genome size of individuals influenced their responses to precipitation frequency changes. Generally, we found switchgrass to be unresponsive to realistic predictions of precipitation changes for the Central Plains of the United States. These studies have provided significant insight into how this important grassland species will respond to future climate change from both an ecological and applied biological perspective. Finally, we provided insight into the mechanism through which this species changes in the face of altered water availability by not supporting the hypothesis that the control of switchgrass responses to changes in precipitation is altered by genome size. Task B: Installation of an extensive green roof system on the Science Center at Saint Joseph's University for research, research-training and educational outreach activities. An experimental green roof system was designed and installed by an outside contractor (Roofmeadows) on the roof of the Science Center at Saint Joseph's University. The roof system includes four test plots, each with a different drainage system, instrumentation to monitor storm water retention, roof deck temperature, heat flux into and out of the building, rain fall, wind speed and direction, relative humidity and heat emission from the roof system. The vegetative roof was planted with 26 species of plants, distributed throughout the roof area, to assess species/variety growth and coverage characteristics, both in terms of the different drain layer systems, and in terms of the different exposures along the north to south axis of the building. Analysis of the drain layer performance, in terms of storm water retention, shows that the aggregate (stone) drainage layer system performed the best, with the moisture management mat system second, and the geotextile drain layer and reservoir sheet layer systems coming in last. Plant growth performance analysis is ongoing, but significant differences have been observed in the third growing season ('13) along the north to south axis, with most species doing better towards the northern end of the roof (in terms of percent ground coverage and plant spread and reproduction). Interestingly, plant growth in all four of the test plots was reduced relative to the lower areas of the roof (the lower area was ca. 2 inches lower than the test plots, due to the space needed for sensors under the plots. The lower roof area uses an aggregate drain layer comparable to that in the third test plot), even when accounting for the north to south differences. The reasons for these differences are not clear and studies are underway to examine the impact of wind scour, drainage rates, temperature, and other factors. Task C: Education and community outreach efforts by the IES involving conferences at SJU, presentations by faculty and students off campus, and educational signage. The Institute for Environmental Stewardship hosted three storm water management workshops on the SJU campus in Philadelphia, in collaboration with the Lower Merion Conservancy, a not-for-profit organizati

  17. Genomic definition of species

    SciTech Connect (OSTI)

    Crkvenjakov, R.; Drmanac, R.

    1991-07-01T23:59:59.000Z

    The subject of this paper is the definition of species based on the assumption that genome is the fundamental level for the origin and maintenance of biological diversity. For this view to be logically consistent it is necessary to assume the existence and operation of the new law which we call genome law. For this reason the genome law is included in the explanation of species phenomenon presented here even if its precise formulation and elaboration are left for the future. The intellectual underpinnings of this definition can be traced to Goldschmidt. We wish to explore some philosophical aspects of the definition of species in terms of the genome. The point of proposing the definition on these grounds is that any real advance in evolutionary theory has to be correct in both its philosophy and its science.

  18. Genomic library construction

    DOE Patents [OSTI]

    Church, George M. (Brookline, MA); Zhang, Kun (San Diego, CA)

    2011-07-26T23:59:59.000Z

    Compositions and methods for amplifying nucleic acid sequences from a single cell are provided. Compositions and methods for constructing a genomic library from a single cell are also provided.

  19. Joint Institutes | ornl.gov

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative1 First Use of Energy for All Purposes (Fuel and Nonfuel), 2002; Level: National5Sales for4,645U.S. DOE Office of Science (SC)Integrated Codes |Is Your Home as Ready for(SC)Joint Genome Institute (JGI)

  20. Nucleomorph genomes: structure, function, origin and evolution

    E-Print Network [OSTI]

    Archibald, John

    Nucleomorph genomes: structure, function, origin and evolution John M. Archibald Summary and four genomes--two nuclear genomes, an endosymbiont- derived plastid genome and a mitochondrial genome derived from the host cell. Like mitochondrial and plastid genomes, the genome of the endosymbiont nucleus

  1. NATIONAL ENVIRONMENTAL RESEARCH INSTITUTE AARHUS UNIVERSITY

    E-Print Network [OSTI]

    DENMARK'S NATIONAL INVENTORY REPORT 2009 Emission Inventories 1990-2007 ­ Submitted under the United INSTITUTE AARHUS UNIVERSITYAU NERI Technical Report no. 724 2009 DENMARK'S NATIONAL INVENTORY REPORT 2009 Emission Inventories 1990-2007 ­ Submitted under the United Nations Framework Convention on Climate Change

  2. Georgia Water Resources Institute Annual Technical Report

    E-Print Network [OSTI]

    and Wildlife Service. GWRI also has a significant international involvement in Europe, Africa, China, and South-based Hydrologic Forecasts, Aris Georgakakos PI, Georgia Institute of Technology, sponsored by NOAA OGP Climate graduate education, applied research, and technology transfer in the areas of water, energy

  3. Reference-Free Comparative Genomics of 174 Chloroplasts

    E-Print Network [OSTI]

    and Center for Bioinformatics and Computational Biology, Institute for Advanced Computer Studies, University% of the chloroplast was duplicated in the inverted repeat (IR) region across a four-fold difference in genome sizes without the IR regions, indicating a crucial functional role of this duplication. Localized de novo

  4. Phytozome: a Tool for Green Plant Comparative Genomics

    DOE Data Explorer [Office of Scientific and Technical Information (OSTI)]

    Phytozome is a joint project of the Department of Energy's Joint Genome Institute and the Center for Integrative Genomics to facilitate comparative genomic studies amongst green plants. Clusters of orthologous and paralogous genes that represent the modern descendents of ancestral gene sets are constructed at key phylogenetic nodes. These clusters allow easy access to clade specific orthology/paralogy relationships as well as clade specific genes and gene expansions. As of release v4.0, Phytozome provides access to nine sequenced and annotated green plant genomes, eight of which have been clustered into gene families at six evolutionarily significant nodes. Where possible, each gene has been annotated with PFAM, KOG, KEGG, and PANTHER assignments, and publicly available annotations from RefSeq, UniProt, TAIR, JGI are hyper-linked and searchable. [Copied from the Overview at http://www.phytozome.net/Phytozome_info.php

  5. Complete genome sequence of Arthrobacter sp. strain FB24

    SciTech Connect (OSTI)

    Nakatsu, C. H.; Barabote, Ravi; Thompson, Sue; Bruce, David; Detter, Chris; Brettin, T.; Han, Cliff F.; Beasley, Federico; Chen, Weimin; Konopka, Allan; Xie, Gary

    2013-09-30T23:59:59.000Z

    Arthrobacter sp. strain FB24 is a species in the genus Arthrobacter Conn and Dimmick 1947, in the family Micrococcaceae and class Actinobacteria. A number of Arthrobacter genome sequences have been completed because of their important role in soil, especially bioremediation. This isolate is of special interest because it is tolerant to multiple metals and it is extremely resistant to elevated concentrations of chromate. The genome consists of a 4,698,945 bp circular chromosome and three plasmids (96,488, 115,507, and 159,536 bp, a total of 5,070,478 bp), coding 4,536 proteins of which 1,257 are without known function. This genome was sequenced as part of the DOE Joint Genome Institute Program.

  6. Identification and characterization of insect-specific proteins by genome data analysis

    E-Print Network [OSTI]

    Zhang, Guojie; Wang, Hongsheng; Shi, Junjie; Wang, Xiaoling; Zheng, Hongkun; Wong, Gane Ka-Shu; Clark, Terry; Wang, Wen; Wang, Jun; Kang, Le

    2007-04-04T23:59:59.000Z

    ral ssBioMed CentBMC Genomics Open AcceResearch article Identification and characterization of insect-specific proteins by genome data analysis Guojie Zhang†1,2,3, Hongsheng Wang†1, Junjie Shi†2, Xiaoling Wang2, Hongkun Zheng2, Gane Ka-Shu Wong2..., Terry Clark4, Wen Wang3, Jun Wang2,5 and Le Kang*1 Address: 1State Key Laboratory of Integrated Management of Pest Insects and Rodents, Institute of Zoology Chinese Academy of Sciences, Haidian Beijing 100080, China, 2Beijing Institute of Genomics...

  7. Formulating Climate Change Scenarios to Inform Climate - Resilient...

    Open Energy Info (EERE)

    Formulating Climate Change Scenarios to Inform Climate - Resilient Development Strategies Jump to: navigation, search Tool Summary LAUNCH TOOL Name: Formulating Climate Change...

  8. Global Climate Change Impacts:Global Climate Change Impacts: Implications for Climate EngineeringImplications for Climate Engineering

    E-Print Network [OSTI]

    Polz, Martin

    Global Climate Change Impacts:Global Climate Change Impacts: Implications for Climate Engineering Center Global Climate Change Impacts in the United States October 29, 2009 #12;2Global Climate Change Impacts in the United States 2 Response Strategies to ClimateResponse Strategies to Climate ChangeChange

  9. A review of Holocene solar-linked climatic variation on centennial to millennial timescales: Physical processes, interpretative frameworks and

    E-Print Network [OSTI]

    Usoskin, Ilya G.

    A review of Holocene solar-linked climatic variation on centennial to millennial timescales Key Laboratory of Marine Environmental Science, Xiamen University, Xiamen, China d Department, Kaohsiung, Taiwan h Institute of Public Affairs, Melbourne, Australia i Institute of Solar

  10. Fueling the Future with Fungal Genomics

    E-Print Network [OSTI]

    Grigoriev, Igor V.

    2011-01-01T23:59:59.000Z

    JW. 2010. China's fungal genomics initiative: a whitepaper.and Saccharomycotina. BMC Genomics. 8, 325. Bailly J,Harnessing ectomycorrhizal genomics for ecological insights.

  11. Bioinformatics and Genomics Degree Requirements Booklet

    E-Print Network [OSTI]

    dePamphilis, Claude

    Bioinformatics and Genomics Degree Requirements Booklet Fall 2010 #12;Contents Course Requirements Bioinformatics and Genomics Curriculum -------------------------------------------------------8 General #12;Bioinformatics and Genomics Option (BG

  12. VISTA - computational tools for comparative genomics

    E-Print Network [OSTI]

    Frazer, Kelly A.; Pachter, Lior; Poliakov, Alexander; Rubin, Edward M.; Dubchak, Inna

    2004-01-01T23:59:59.000Z

    tools for comparative genomics Kelly A. Frazer 1 , LiorBerkeley, CA, 94720 Genomics Division, Lawrence Berkeleymultiple comparative genomics tools and provides users with

  13. Climate change risk and response

    E-Print Network [OSTI]

    Kahrl, Fredrich; Roland-Holst, David

    2008-01-01T23:59:59.000Z

    the Potential Consequences of Climate Variability and Changeand Kate Scow. 2006. “Climate Change: Page 117 ChallengesLandscapes. ” California Climate Change Center White Paper.

  14. Climate change risk and response

    E-Print Network [OSTI]

    Kahrl, Fredrich; Roland-Holst, David

    2008-01-01T23:59:59.000Z

    and Kate Scow. 2006. “Climate Change: Page 117 ChallengesLandscapes. ” California Climate Change Center White Paper.Sea Level. ” California Climate Change Center White Paper.

  15. Climate Change and National Security

    E-Print Network [OSTI]

    Alyson, Fleming; Summer, Kelly; Summer, Martin; Lauren, Franck; Jonathan, Mark

    2015-01-01T23:59:59.000Z

    CLIMATE CHANGE Multiplying Threats to National Securityfor the impacts of climate change on national security. Pagea warming world. Page 11 “Climate change acts as a threat

  16. Climate change risk and response

    E-Print Network [OSTI]

    Kahrl, Fredrich; Roland-Holst, David

    2008-01-01T23:59:59.000Z

    net impact of climate change on agriculture in California,of Climate Change on California Agriculture. ” PresentationEffects of Climate Change on California Agriculture Positive

  17. Climate Change and Agriculture Reconsidered

    E-Print Network [OSTI]

    Fisher, Anthony

    2009-01-01T23:59:59.000Z

    2009 Paper 1080 Climate Change and Agriculture Reconsideredby author(s). Climate Change and Agriculture Reconsideredimpact of climate change on agriculture, there still exists

  18. Climatic change at high elevation sites

    SciTech Connect (OSTI)

    Dr. Henry F. Diaz

    1998-07-23T23:59:59.000Z

    A Workshop on climatic change at high elevation sites was held September 11-15, 1995 in Wengen, Switzerland. The meeting was sponsored by both U.S. (Department of Energy, National Science Foundation and National Oceanic & Atmospheric Administration) and European (Swiss National Science Foundation, European Science Foundation, Swiss Federal Institute of Technology) agencies. The goals of the workshop were to (1) focus the attention of the world climate community on the existence of unique high elevation geophysical records around the world, (2) highlight the value of these observing sites for climate change detection efforts and to help insure the continued support of governments and of relevant institutions in the maintenance of these high elevation data gathering efforts, (3) discuss and evaluate climatic trends that may be present in these records, and to compare the information with available paleoenvironmental records of glaciers, tree-rings and varved sediments from the alpine zones, and (4) discuss and evaluate information about elevational differences in current and projected greenhouse-gas induced climatic changes in coupled General Circulation Models.

  19. Engineering Institute

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative1 First Use of Energy for All Purposes (Fuel and Nonfuel), 2002; Level: National5Sales for4,645 3,625 1,006 492 742EnergyOnItem NotEnergy,ARMFormsGasReleaseSpeeches Energy Speeches RSS JuneInstitute Engineering

  20. Seaborg Institute

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative1 First Use of Energy for All Purposes (Fuel and Nonfuel), 2002; Level: National5Sales for4,645U.S. DOE Office of ScienceandMesa del Sol HomeFacebook Twitter PrincipalfuelTorusconditionsSupportedScottInstitute

  1. Computational genomics : mapping, comparison, and annotation of genomes

    E-Print Network [OSTI]

    Batzoglou, Serafim

    2000-01-01T23:59:59.000Z

    The field of genomics provides many challenges to computer scientists and mathematicians. The area of computational genomics has been expanding recently, and the timely application of computer science in this field is ...

  2. Climate ChangeClimate Change and Runoff Managementand Runoff Management

    E-Print Network [OSTI]

    Sheridan, Jennifer

    Climate ChangeClimate Change and Runoff Managementand Runoff Management in Wisconsinin Wisconsin NASECA February 3, 2011 David S. Liebl #12;Overview · Understanding climate change · Wisconsin's changing climate · Expected impacts · Adaptation strategies #12;Visible Light Energy in = Energy out Absorbed

  3. Developing Models for Predictive Climate Science

    SciTech Connect (OSTI)

    Drake, John B [ORNL; Jones, Philip W [Los Alamos National Laboratory (LANL)

    2007-01-01T23:59:59.000Z

    The Community Climate System Model results from a multi-agency collaboration designed to construct cutting-edge climate science simulation models for a broad research community. Predictive climate simulations are currently being prepared for the petascale computers of the near future. Modeling capabilities are continuously being improved in order to provide better answers to critical questions about Earth's climate. Climate change and its implications are front page news in today's world. Could global warming be responsible for the July 2006 heat waves in Europe and the United States? Should more resources be devoted to preparing for an increase in the frequency of strong tropical storms and hurricanes like Katrina? Will coastal cities be flooded due to a rise in sea level? The National Climatic Data Center (NCDC), which archives all weather data for the nation, reports that global surface temperatures have increased over the last century, and that the rate of increase is three times greater since 1976. Will temperatures continue to climb at this rate, will they decline again, or will the rate of increase become even steeper? To address such a flurry of questions, scientists must adopt a systematic approach and develop a predictive framework. With responsibility for advising on energy and technology strategies, the DOE is dedicated to advancing climate research in order to elucidate the causes of climate change, including the role of carbon loading from fossil fuel use. Thus, climate science--which by nature involves advanced computing technology and methods--has been the focus of a number of DOE's SciDAC research projects. Dr. John Drake (ORNL) and Dr. Philip Jones (LANL) served as principal investigators on the SciDAC project, 'Collaborative Design and Development of the Community Climate System Model for Terascale Computers.' The Community Climate System Model (CCSM) is a fully-coupled global system that provides state-of-the-art computer simulations of the Earth's past, present, and future climate states. The collaborative SciDAC team--including over a dozen researchers at institutions around the country--developed, validated, documented, and optimized the performance of CCSM using the latest software engineering approaches, computational technology, and scientific knowledge. Many of the factors that must be accounted for in a comprehensive model of the climate system are illustrated in figure 1.

  4. Advanced Studies Institute

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Engineering Institute Advanced Studies Institute Contact Institute Director Charles Farrar (505) 663-5330 Email UCSD EI Director Michael Todd (858) 534-5951 Professional Staff...

  5. Sequencing of Seven Haloarchaeal Genomes Reveals Patterns of Genomic Flux

    E-Print Network [OSTI]

    Hammerton, James

    Sequencing of Seven Haloarchaeal Genomes Reveals Patterns of Genomic Flux Erin A. Lynch1 , Morgan G. Eisen1,3,12,13 *, Marc T. Facciotti1,3,14 * 1 Microbiology Graduate Group, University of California We report the sequencing of seven genomes from two haloarchaeal genera, Haloferax and Haloarcula

  6. Clinical Microfluidics for Neutrophil Genomics and Proteomics...

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Clinical Microfluidics for Neutrophil Genomics and Proteomics. Clinical Microfluidics for Neutrophil Genomics and Proteomics. Abstract: Neutrophils play critical roles in...

  7. Mammalian comparative genomics and epigenomics

    E-Print Network [OSTI]

    Mikkelsen, Tarjei Sigurd, 1978-

    2009-01-01T23:59:59.000Z

    The human genome sequence can be thought of as an instruction manual for our species, written and rewritten over more than a billion of years of evolution. Taking a complete inventory of our genome, dissecting its genes ...

  8. Climate WorkshopsClimate Workshops for Department Chairsp

    E-Print Network [OSTI]

    Tilbury, Dawn

    Climate WorkshopsClimate Workshops for Department Chairsp University of Wisconsin ADVANCE-IT Slides) #12;Why focus on departmental climate? Individuals experience climate in their immediate workplace negative climate than male faculty Improving department climate is critical for retention and advancement

  9. Genomics Division Home

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative1 First Use of Energy for All Purposes (Fuel and Nonfuel), 2002; Level: National5Sales for4,645U.S. DOEThe Bonneville Power AdministrationField8,Dist.Newof EnergyFundingGeneGenome Engineering withfor Genomics

  10. Climate Leadership Conference

    Office of Energy Efficiency and Renewable Energy (EERE)

    The Climate Leadership Conference is your annual exchange for addressing global climate change through policy, innovation, and business solutions. Forward-thinking lead­ers from busi­ness, gov­ern...

  11. The Climate Policy Dilemma

    E-Print Network [OSTI]

    Pindyck, Robert S.

    Climate policy poses a dilemma for environmental economists. The economic argument for stringent GHG abatement is far from clear. There is disagreement among both climate scientists and economists over the likelihood of ...

  12. Sandia National Laboratories: Climate

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    to address the most challenging and demanding climate-change issues. Accelerated Climate Modeling for Energy (ACME) is designed to accel-erate the development and applica-tion of...

  13. The Climate Policy Dilemma

    E-Print Network [OSTI]

    Pindyck, Robert S.

    Climate policy poses a dilemma for environmental economists. The economic argument for stringent greenhouse gas (GHG) abatement is far from clear. There is disagreement among both climate scientists and economists concerning ...

  14. Climate change scenario planning in Alaska's National Parks: Stakeholder involvement in the decision-making process

    SciTech Connect (OSTI)

    Ernst, Kathleen M [ORNL] [ORNL; Van Riemsdijk, Dr. Micheline [University of Tennessee (UT)] [University of Tennessee (UT)

    2013-01-01T23:59:59.000Z

    This article studies the participation of stakeholders in climate change decision-making in Alaska s National Parks. We place stakeholder participation within literatures on environmental and climate change decision-making. We conducted participant observation and interviews in two planning workshops to investigate the decision-making process, and our findings are three-fold. First, the inclusion of diverse stakeholders expanded climate change decision-making beyond National Park Service (NPS) institutional constraints. Second, workshops of the Climate Change Scenario Planning Project (CCSPP) enhanced institutional understandings of participants attitudes towards climate change and climate change decision-making. Third, the geographical context of climate change influences the decisionmaking process. As the first regional approach to climate change decision-making within the NPS, the CCSPP serves as a model for future climate change planning in public land agencies. This study shows how the participation of stakeholders can contribute to robust decisions, may move climate change decision-making beyond institutional barriers, and can provide information about attitudes towards climate change decision-making.

  15. Climate Change Scenario Planning in Alaska's National Parks: Stakeholder Involvement in the Decision-Making Process

    SciTech Connect (OSTI)

    Ernst, Kathleen M [ORNL] [ORNL; Van Riemsdijk, Dr. Micheline [University of Tennessee (UT)] [University of Tennessee (UT)

    2013-01-01T23:59:59.000Z

    This article studies the participation of stakeholders in climate change decision-making in Alaska s National Parks. We place stakeholder participation within literatures on environmental and climate change decision-making. We conducted participant observation and interviews in two planning workshops to investigate the decision-making process, and our findings are three-fold. First, the inclusion of diverse stakeholders expanded climate change decision-making beyond National Park Service (NPS) institutional constraints. Second, workshops of the Climate Change Scenario Planning Project (CCSPP) enhanced institutional understandings of participants attitudes towards climate change and climate change decision-making. Third, the geographical context of climate change influences the decision-making process. As the first regional approach to climate change decision-making within the NPS, the CCSPP serves as a model for future climate change planning in public land agencies. This study shows how the participation of stakeholders can contribute to robust decisions, may move climate change decision-making beyond institutional barriers, and can provide information about attitudes towards climate change decision-making.

  16. SHORT REVIEW Butterfly genomics eclosing

    E-Print Network [OSTI]

    Beldade, Patrícia

    SHORT REVIEW Butterfly genomics eclosing P Beldade1 , WO McMillan2 and A Papanicolaou3 1 Section to an explosion of genomic data and the emergence of new research avenues. Evolutionary and ecological functional genomics, with its focus on the genes that affect ecological success and adaptation in natural populations

  17. Role of the stratosphere in Northern winter climate change as simulated by the1 CMIP5 models2

    E-Print Network [OSTI]

    Gerber, Edwin

    1 Role of the stratosphere in Northern winter climate change as simulated by the1 CMIP5; 3 Abstract39 40 Stratospheric climate change and its potential for surface climate change Studies, NASA, New York, USA34 (20) Institute of Numerical Mathematics, Moscow, Russia35 (21) Japan

  18. Climate Change Economics and Policy

    E-Print Network [OSTI]

    Romano, Daniela

    AFRICA COLLEGE Centre for Climate Change Economics and Policy Adapting to Climate Change 3 CLIMATE...Furthermore, there is strong scientific evidence that climate change will disrupt the global economy, environment and society a growing population in a changing climate is, therefore, a major global challenge. Changes in climate

  19. Campus Conversations: CLIMATE CHANGE

    E-Print Network [OSTI]

    Attari, Shahzeen Z.

    booklet is an adaptation and updating of Global Warming and Climate Change, a brochure developed in 1994 that will address climate change. Scientists tell us that the climate of the earth is warming, and that the warming into the foundation of the world economy and into the everyday things we do (driving) and use (electricity). Thus

  20. METEOROLOGICAL Journal of Climate

    E-Print Network [OSTI]

    Feng, Ming

    AMERICAN METEOROLOGICAL SOCIETY Journal of Climate EARLY ONLINE RELEASE This is a preliminary PDF it is available. © 201 American Meteorological Society1 #12;Sun et al. climate downscaling of the Australian currents 1 Marine downscaling of a future climate scenario for Australian boundary currents Chaojiao Sun

  1. Campus Climate Camden Campus

    E-Print Network [OSTI]

    Hanson, Stephen José

    Campus Climate Report Camden Campus New Brunswick/Piscataway Campus Newark Campus Student Survey #12;I. INTRODUCTION Executive Summary The Rutgers Campus Climate Survey was designed to determine how University, the campus climate surveys revealed strong areas of satisfaction with the Rutgers University

  2. Forest Research: Climate Change

    E-Print Network [OSTI]

    Forest Research: Climate Change projects Forest Research is part of the Forestry Commission of climate change-related research is wide-ranging, covering impact assessment and monitoring, adaptation around a quarter of its research budget with Forest Research on climate change and related programmes

  3. Climate Change Workshop 2007

    E-Print Network [OSTI]

    Nebraska-Lincoln, University of

    1 Climate Change Workshop 2007 Adaptive Management and Resilience Relevant for the Platte River, UNL Climate Change Workshop 2007 · Resilience ·Why it matters · Adaptive Management ·How it helps ·Adaptive Capacity · What it is Overview Climate Change Workshop 2007 "A public Domain, once a velvet carpet

  4. Penn Genome Frontiers Institute's Ten-Year Anniversary Symposium

    E-Print Network [OSTI]

    Plotkin, Joshua B.

    :40 Genetics and epigenetics of human gene regulation Richard M. Myers, PhD President and Director, Hudson level analyses of cells and embryos Scott E. Fraser, PhD Anna L. Rosen Professor of Biology 4:20 ­ 5:00 The secret life of a single cell Jim Eberwine, PhD Elmer Holmes Bobst Professor

  5. Rooted in Wonder: Joint Genome Institute Study Reveals Amazing World

    Office of Energy Efficiency and Renewable Energy (EERE) Indexed Site

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative Fuels Data Center Home Page on Google Bookmark EERE: Alternative Fuels DataDepartment of Energy Your Density Isn'tOrigin ofEnergy at Waste-to-Energy usingofRetrofittingFundA l i c eRooftopUnderfoot |

  6. U.S. Department of Energy Joint Genome Institute

    Office of Scientific and Technical Information (OSTI)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative1 First Use of Energy for All Purposes (Fuel and Nonfuel), 2002; Level: National5Sales for4,645 3,625 1,006 492 742EnergyOnItem Not FoundInformation DOEInformation Summary Big*The LA:UR-Energy Joint

  7. Final Technical Report of Institute for Environmental Genomics of

    Office of Scientific and Technical Information (OSTI)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative1 First Use of Energy for All Purposes (Fuel and Nonfuel), 2002; Level: National5Sales for4,645 3,625 1,006 492 742EnergyOnItem Not Found Item Not Found The itemAIR57451 CleanFORTechnicalFINAL

  8. Critical Materials Institute uses the Materials Genome approach to

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative1 First Use of Energy for All Purposes (Fuel and Nonfuel), 2002; Level: National5Sales for4,645U.S. DOEThe Bonneville Power Administration would likeConstitution4 Department of Energy CarlsbadWinterAnyone who

  9. Improving biofuel feedstocks by modifying xylan biosynthesis (2013 DOE JGI Genomics of Energy and Environment 8th Annual User Meeting)

    SciTech Connect (OSTI)

    Lau, Jane [JBEI

    2013-03-01T23:59:59.000Z

    Jane Lau of the Joint BioEnergy Institute on "Improving biofuel feedstocks by modifying xylan biosynthesis" at the 8th Annual Genomics of Energy & Environment Meeting on March 28, 2013 in Walnut Creek, Calif.

  10. Climate Variability and Climate Change: The New Climate Dice 10 November 2011

    E-Print Network [OSTI]

    Hansen, James E.

    1 Climate Variability and Climate Change: The New Climate Dice 10 November 2011 J. Hansen, M. Sato, coincident with increased global warming. The most dramatic and important change of the climate dice change is the natural variability of climate. How can a person discern long-term climate change, given

  11. Coral Reef Genomics: Developing tools for functional genomics of coral symbiosis

    E-Print Network [OSTI]

    Schwarz, Jodi; Brokstein, Peter; Manohar, Chitra; Coffroth, Mary Alice; Szmant, Alina; Medina, Monica

    2008-01-01T23:59:59.000Z

    Coral Reef Genomics: Developing toolsfor functional genomics of coral symbiosis Jodi SCHWARZ 1 ,symbiosis functional genomics cDNA microarray ABSTRACT

  12. Navigating protected genomics data with UCSC Genome Browser in a Box.

    E-Print Network [OSTI]

    2014-01-01T23:59:59.000Z

    H. et al. (2013) Integrative Genomics Viewer (IGV):High-performance genomics data visualization andbrowsers for comparative genomics. Bioinformatics. In press.

  13. A physical map of the papaya genome with integrated genetic map and genome sequence

    E-Print Network [OSTI]

    2009-01-01T23:59:59.000Z

    genetic map and genome sequence Qingyi Yu 1 , Eric Tong 1 ,assist whole genome shotgun sequence assembly. Results: Thethe genetic map and genome sequence using BAC end sequences

  14. Salt Stress in Desulfovibrio vulgaris Hildenborough: An integrated genomics approach

    E-Print Network [OSTI]

    Mukhopadhyay, Aindrila

    2010-01-01T23:59:59.000Z

    2002. Integrating cancer genomics and proteomics in theWeb site for comparative genomics. Genome Res 15:1015-22.Hildenborough: An integrated genomics approach. Aindrila

  15. Computational methods and analyses in comparative genomics and epigenomics

    E-Print Network [OSTI]

    Peng, Qian

    2012-01-01T23:59:59.000Z

    promise of comparative genomics in mammals. Science, 286,homology relationships. Genomics, Dehal, P. and Boore, J.to plant comparative genomics. Genome Research, 13(5), 999–

  16. acanthamoeba castellanii genome: Topics by E-print Network

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    and Medicine Websites Summary: Prokaryotic Genomes Eurkaryotic Genomes Chapter 6. Genomics and Gene Identification Weigang Qiu Weigang Qiu Chapter 6. Genomics and Gene...

  17. aeromonas caviae genomic: Topics by E-print Network

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    and Medicine Websites Summary: Prokaryotic Genomes Eurkaryotic Genomes Chapter 6. Genomics and Gene Identification Weigang Qiu Weigang Qiu Chapter 6. Genomics and Gene...

  18. Is this climate porn? How does climate change communication

    E-Print Network [OSTI]

    Watson, Andrew

    Is this climate porn? How does climate change communication affect our perceptions and behaviour;1 Is this climate porn? How does climate change communication affect our perceptions and behaviour? Thomas D. Lowe 1 these kinds of messages (which have recently been dubbed `climate porn' (Ereaut and Segnit, 2006)), can

  19. Climate history and paleoclimate -HS 2011 Climate proxies

    E-Print Network [OSTI]

    Gilli, Adrian

    Climate history and paleoclimate - HS 2011 Climate proxies 18O Climate History & Paleoclimate ­ September 30, 2011 #12;How do we know about the past? Instrumental Historical Through proxies Climate proxies Climate history and paleoclimate - HS 2011 #12;What is a `proxy'? "Proxy, as used here

  20. Ensemble climate predictions using climate models and observational constraints

    E-Print Network [OSTI]

    REVIEW Ensemble climate predictions using climate models and observational constraints BY PETER A. STOTT 1,* AND CHRIS E. FOREST 2 1 Hadley Centre for Climate Change (Reading Unit), Meteorology Building for constraining climate predictions based on observations of past climate change. The first uses large ensembles

  1. Climate history and paleoclimate -HS 2011 Future climate

    E-Print Network [OSTI]

    Gilli, Adrian

    Climate history and paleoclimate - HS 2011 Future climate Climate History & Paleoclimate - December 9, 2011 1 #12;Climate history and paleoclimate - HS 2011 IPCC 2007 4th Assessment report (AR4) More information can be found: http://www.ipcc.ch/ Remark: 5th assessment report is due in 2013/2014 2 #12;Climate

  2. Climate Change: Conflict, Security and Vulnerability Professor of Climate Change

    E-Print Network [OSTI]

    Hulme, Mike

    Climate Change: Conflict, Security and Vulnerability Mike Hulme Professor of Climate Change Science, Society and Sustainability Group School of Environmental Sciences Rethinking Climate Change, Conflict security" "increase risk of conflicts among and within nations" #12;· from `climatic change' to `climate-change

  3. Sandia National Laboratories: Accelerated Climate Modeling for...

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Accelerated Climate Modeling for Energy New Project Is the ACME of Computer Science to Address Climate Change On December 3, 2014, in Analysis, Climate, Global Climate & Energy,...

  4. GIS: a web-based genomics information system for efficiently manipulating and accessing genome physical maps 

    E-Print Network [OSTI]

    Chen, Huaming

    2000-01-01T23:59:59.000Z

    Biological science has entered the genome era. Global genome integrative physical and genetic mapping promises to revolutionize modern genomics research. To facilitate manipulation and applications of the results from genomics research, many...

  5. Population genomics: Whole-genome analysis of polymorphism and divergence in Drosophila simulans

    E-Print Network [OSTI]

    2007-01-01T23:59:59.000Z

    PLoS BIOLOGY Population Genomics: Whole-Genome Analysis ofwww.plosbiology.org Population Genomics of D. simulans Table11 | e310 Population Genomics of D. simulans Table S15. GO

  6. GIS: a web-based genomics information system for efficiently manipulating and accessing genome physical maps

    E-Print Network [OSTI]

    Chen, Huaming

    2000-01-01T23:59:59.000Z

    Biological science has entered the genome era. Global genome integrative physical and genetic mapping promises to revolutionize modern genomics research. To facilitate manipulation and applications of the results from genomics research, many...

  7. POSTDOCTORAL POSITION IN BIOINFORMATICS AND EVOLUTIONARY GENOMICS: Next generation sequencing and analysis of complex polyploid genomes

    E-Print Network [OSTI]

    Rennes, Université de

    POSTDOCTORAL POSITION IN BIOINFORMATICS AND EVOLUTIONARY GENOMICS: Next generation sequencing and analysis of complex polyploid genomes The research group Genome Evolution and Speciation (Team) to work on the analysis of genome and transcriptome sequence data (generated using 454 Roche

  8. Original article Neisseria Base: a comparative genomics

    E-Print Network [OSTI]

    Jordan, King

    Original article Neisseria Base: a comparative genomics database for Neisseria meningitidis Lee S, septicemia and in some cases pneumonia. Genomic studies hold great promise for N. meningitidis research genomics database and genome browser that houses and displays publicly available N. meningitidis genomes

  9. A Novel Approach for Comparative Genomics

    E-Print Network [OSTI]

    Paris-Sud XI, Université de

    A Novel Approach for Comparative Genomics & Annotation Transfer Alban MANCHERON Raluca URICARU Eric is genome comparison good for?" Genome comparison is crucial for genome annotation, regulatory motifs identification, and vaccine design aims at finding genomic regions either specific to or in one

  10. Diverse Lifestyles and Strategies of Plant Pathogenesis Encoded in the Genomes of Eighteen Doethideomycetes Fungi

    SciTech Connect (OSTI)

    Ohm, Robin A.; Feau, Nicolas; Henrissat, Bernard; Schoch, Conrad L.; Horwitz, Benjamin A.; Barry, Kerrie W.; Condon, Bradford J.; Copeland, Alex C.; Dhillon, Braham; Glaser, Fabien; Hesse, Cedar N.; Kosti, Idit; LaButti, Kurt; Lindquist, Erika A.; Lucas, Susan; Salamov, Asaf A.; Bradshaw, Rosie E.; Ciuffetti, Lynda; Hamelin, Richard C.; Kema, Gert H. J.; Lawrence, Christopher; Scott, James A.; Spatafora, Joseph W.; Turgeon, B. Gillian; de Wit, Pierre J. G. M.; Zhong, Shaobin; Goodwin, Stephen B.; Grigoriev, Igor V.

    2012-03-13T23:59:59.000Z

    The class of Dothideomycetes is one of the largest and most diverse groups of fungi. Many are plant pathogens and pose a serious threat to agricultural crops grown for biofuel, food or feed. Most Dothideomycetes have only a single host and related species can have very diverse host plants. Eighteen genomes of Dothideomycetes have currently been sequenced by the Joint Genome Institute and other sequencing centers. Here we describe the results of comparative analyses of the fungi in this group.

  11. The Climate Impacts LINK Project

    E-Print Network [OSTI]

    Feigon, Brooke

    The Climate Impacts LINK Project The Climatic Research Unit, University of East Anglia Funded by the UK Department of the Environment, Transport and the Regions, Contract Ref EPG 1/1/68 The Climate Impacts LINK Project: Applying Results from the Hadley Centre's Climate Change Experiments for Climate

  12. Abrupt Climate Change Inevitable Surprises

    E-Print Network [OSTI]

    Abrupt Climate Change Inevitable Surprises Committee on Abrupt Climate Change Ocean Studies Board of Congress Cataloging-in-Publication Data Abrupt climate change : inevitable surprises / Committee on Abrupt Climate Change, Ocean Studies Board, Polar Research Board, Board on Atmospheric Sciences and Climate

  13. Climate Change Proposed Scoping Plan

    E-Print Network [OSTI]

    Climate Change Proposed Scoping Plan a amework for change Prepared by the California Air ResourcesBackgroundBackgroundBackground ............................................................................................................................................................................................................................................................................................................................................................................................................ 4444 1. Climate Change Policy in California1. Climate Change Policy in California1. Climate Change Policy in California1. Climate Change Policy in California

  14. Conservation and Global Climate Change

    E-Print Network [OSTI]

    Landweber, Laura

    V.6 Conservation and Global Climate Change Diane M. Debinski and Molly S. Cross OUTLINE 1. Introduction 2. How climate is changing 3. Environmental responses to climate change 4. Consequences of climate the coming decades will be preserving biodiversity in the face of climate change. It has become increasingly

  15. Environmental Change Institute Environmental Change Institute

    E-Print Network [OSTI]

    Oxford, University of

    Environmental Change Institute 2012/13 eci Environmental Change Institute #12;ii Environmental 06 Educating environmental leaders 08 Centre for interdisciplinary doctoral training 10 A thriving, Dumfriesshire (ECI) #12;1 The Environmental Change Institute has 21 years' experience in helping governments

  16. Global climatic catastrophes

    SciTech Connect (OSTI)

    Budyko, M.I.; Golitsyn, G.S.; Izrael, A

    1988-01-01T23:59:59.000Z

    This work inquires into global climatic catastrophes of the past, presenting data not easily available outside of the Socialist Countries, and applies these results to the study of future climatic developments, especially as they threaten in case of Nuclear Warfare - Nuclear Winter. The authors discuss probable after effects from the Soviet point of view on the basis of research, stressing the need to avoid all conflict which might lead to the next and final Global Climatic Catastrophy.

  17. Probabilistic projections of 21st century climate change over Northern Eurasia

    E-Print Network [OSTI]

    Monier, Erwan

    We present probabilistic projections of 21st century climate change over Northern Eurasia using the Massachusetts Institute of Technology (MIT) Integrated Global System Model (IGSM), an integrated assessment model that ...

  18. Probabilistic Projections of 21st Century Climate Change over Northern Eurasia

    E-Print Network [OSTI]

    Monier, Erwan

    2013-07-18T23:59:59.000Z

    We present probabilistic projections of 21st century climate change over Northern Eurasia using the Massachusetts Institute of Technology (MIT) Integrated Global System Model (IGSM), an integrated assessment model that ...

  19. Argonne OutLoud: "Climate Change: Fact, Fiction and What You Can Do"

    ScienceCinema (OSTI)

    Sisterson, Douglas

    2015-02-19T23:59:59.000Z

    Research meteorologist Doug Sisterson discusses climate change and the cutting-edge research taking place at Argonne as well as collaborative research with other institutions, including the University of Chicago.

  20. CO Capture, Reuse, and Storage Technologies2 for Mitigating Global Climate Change

    E-Print Network [OSTI]

    CO Capture, Reuse, and Storage Technologies2 for Mitigating Global Climate Change A White Paper Final Report DOE Order No. DE-AF22-96PC01257 Energy Laboratory Massachusetts Institute of Technology 77 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 16 5. Geological Storage Technology

  1. Institute for ADVANCED STUDY

    E-Print Network [OSTI]

    OF EVENTS 91 · REPORT OF THE INSTITUTE LIBRARIES 93 · INSTITUTE FOR ADVANCED STUDY/PARK CITY MATHEMATICS. The Institute for Advanced Study has sustained this founding principle for more than sixty-five years

  2. Institute /or ADVANCED STUDY

    E-Print Network [OSTI]

    OF THE INSTITUTE LIBRARIES 63 INSTITUTE FOR ADVANCED STUDY/PARK CITY MATHEMATICS INSTITUTE 66 · MENTORING PROGRAM sustained and has yielded an unsurpassed record of definitive scholarship. Although small in scale

  3. The Genomes and Metagenomes (GEM) Catalogue (first presentation) and The ISA-GCDML Workshop (second presentation) (GSC8 Meeting)

    SciTech Connect (OSTI)

    Field, Dawn [NERC Centre for Ecology and Hydrology; Sansone, Susanna [EBI

    2009-09-09T23:59:59.000Z

    The Genomic Standards Consortium was formed in September 2005. It is an international, open-membership working body which promotes standardization in the description of genomes and the exchange and integration of genomic data. The 2009 meeting was an activity of a five-year funding ''Research Coordination Network'' from the National Science Foundation and was organized held at the DOE Joint Genome Institute with organizational support provided by the JGI and by the University of California - San Diego. Dawn Field of the NERC Centre for Ecology & Hydrology briefly introduces the GEM Catalogue, followed by Susanna Sansone of the European Bioinformatics Institute who talks about the ISA-GCDML workshop at the Genomic Standards Consortium's 8th meeting at the DOE JGI in Walnut Creek, Calif. on Sept. 9, 2009.

  4. The Genomes and Metagenomes (GEM) Catalogue (first presentation) and The ISA-GCDML Workshop (second presentation) (GSC8 Meeting)

    ScienceCinema (OSTI)

    Field, Dawn [NERC Centre for Ecology and Hydrology]; Sansone, Susanna [EBI

    2011-04-29T23:59:59.000Z

    The Genomic Standards Consortium was formed in September 2005. It is an international, open-membership working body which promotes standardization in the description of genomes and the exchange and integration of genomic data. The 2009 meeting was an activity of a five-year funding ''Research Coordination Network'' from the National Science Foundation and was organized held at the DOE Joint Genome Institute with organizational support provided by the JGI and by the University of California - San Diego. Dawn Field of the NERC Centre for Ecology & Hydrology briefly introduces the GEM Catalogue, followed by Susanna Sansone of the European Bioinformatics Institute who talks about the ISA-GCDML workshop at the Genomic Standards Consortium's 8th meeting at the DOE JGI in Walnut Creek, Calif. on Sept. 9, 2009.

  5. Climate Action Plan (Virginia)

    Broader source: Energy.gov [DOE]

    Governor Timothy M. Kaine established the Governor's Commission on Climate Change in December 2007. The commission prepared a plan for Virginia that identified ways to reduce greenhouse gas...

  6. Sandia National Laboratories: Climate

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    from improved climate models to performance models for underground waste storage to 3D printing and digital rock physics. Marianne Walck (Director ... NASA Award for Marginal...

  7. Climate Change, Drought & Environment

    Broader source: Energy.gov [DOE]

    Afternoon Plenary Session: Current Trends in the Advanced Bioindustry Climate Change, Drought, and Environment—Michael Champ, Executive Director, The Sustainable Water Challenge

  8. Climate Vision: Presidential Statements

    Office of Scientific and Technical Information (OSTI)

    Remarks by the President at Major Economies Meeting on Energy Security and Climate Change September 28, 2007 THE PRESIDENT: Good morning. Thank you. Welcome to the State...

  9. Protecting climate with forests.

    E-Print Network [OSTI]

    2008-01-01T23:59:59.000Z

    much more than carbon sequestration does, and often in abiophysics, carbon sequestration, climate change, climatethe accompanying carbon sequestration does—and sometimes in

  10. Sandia National Laboratories: Climate

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Carbon Management On January 27, 2011, in A growing consensus exists among climate scientists, economists, and policy makers that the link between man-made emissions of greenhouse...

  11. Sandia National Laboratories: Climate

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Protected: White House Water Roundtable: Question 4 On September 20, 2011, in Climate, Water There is no excerpt because this is a protected post. Protected: White House Water...

  12. Welcome to Climate VISION

    Office of Scientific and Technical Information (OSTI)

    Program Mission Private Sector Initiatives Asia Pacific Partnership ClimateTechnology.gov Resources and Links 1605(b) Site Map Technology Pathways Contact Us News and Events How...

  13. GenomeView: a next-generation genome browser Thomas Abeel1,2,3,

    E-Print Network [OSTI]

    Gent, Universiteit

    GenomeView: a next-generation genome browser Thomas Abeel1,2,3, *, Thomas Van Parys1,2 , Yvan Saeys GenomeView, a stand-alone genome browser specifically designed to visualize and manipulate a multitude of genomics data. GenomeView enables users to dynamically browse high volumes of aligned short-read data

  14. ClimateChangeLIVE Webcast: Join the Climate Conversation

    Broader source: Energy.gov [DOE]

    Join ClimateChangeLIVE's webcast, bringing together students and climate experts for a discussion about climate change and what students and classes around the country are doing to be part of the climate solution. Students will be able to interact with climate scientists and experts online through Facebook and Twitter. A GreenWorks! grant will be offered to help schools with climate action projects.

  15. 1DANGEROUS CLIMATE CHANGE IN BRAZIL Dangerous Climate

    E-Print Network [OSTI]

    1DANGEROUS CLIMATE CHANGE IN BRAZIL Dangerous Climate A BrAzil-UK AnAlysis of ClimAte ChAnge And deforestAtion impACts in the AmAzon Change in Brazil #12;3DANGEROUS CLIMATE CHANGE IN BRAZIL April 2011Alysis of ClimAte ChAnge And deforestAtion impACts in the AmAzon Change in Brazil #12;4 DANGEROUS CLIMATE CHANGE

  16. Functional Genomics of Drought Tolerance in Bioenergy Crops

    SciTech Connect (OSTI)

    Yin, Hengfu [ORNL; Chen, Rick [ORNL; Yang, Jun [ORNL; Weston, David [ORNL; Chen, Jay [ORNL; Muchero, Wellington [ORNL; Ye, Ning [ORNL; Tschaplinski, Timothy J [ORNL; Wullschleger, Stan D [ORNL; Cheng, Zong-Ming [ORNL; Tuskan, Gerald A [ORNL; Yang, Xiaohan [ORNL

    2014-01-01T23:59:59.000Z

    With the predicted trends in climate change, drought will increasingly impose a grand challenge to biomass production. Most of the bioenergy crops have some degree of drought susceptibility with low water-use efficiency (WUE). It is imperative to improve drought tolerance and WUE in bioenergy crops for sustainable biomass production in arid and semi-arid regions with minimal water input. Genetics and functional genomics can play a critical role in generating knowledge to inform and aid genetic improvement of drought tolerance in bioenergy crops. The molecular aspect of drought response has been extensively investigated in model plants like Arabidopsis, yet our understanding of the molecular mechanisms underlying drought tolerance in bioenergy crops are limited. Crops exhibit various responses to drought stress depending on species and genotype. A rational strategy for studying drought tolerance in bioenergy crops is to translate the knowledge from model plants and pinpoint the unique features associated with individual species and genotypes. In this review, we summarize the general knowledge about drought responsive pathways in plants, with a focus on the identification of commonality and specialty in drought responsive mechanisms among different species and/or genotypes. We describe the genomic resources developed for bioenergy crops and discuss genetic and epigenetic regulation of drought responses. We also examine comparative and evolutionary genomics to leverage the ever-increasing genomics resources and provide new insights beyond what has been known from studies on individual species. Finally, we outline future exploration of drought tolerance using the emerging new technologies.

  17. Climate Change, Drought, and Policymaking in the U.S. Southern Region

    E-Print Network [OSTI]

    Vedlitz, Arnold; Lindquist, Eric; Liu, Xinsheng; Gronberg, Timothy J.; Neilson, William; Weeks, Pris; Dean, Wesley R.; Shi, Liu; Neilson-Gammon, John W.; Zahran, Sammy

    2010-01-01T23:59:59.000Z

    Institute for Science, Technology and Public Policy The Bush School of Government and Public Service Texas A&M University CLIMATE CHANGE, DROUGHT AND POLICYMAKING IN THE U.S. SOUTHERN REGION Dr. Arnold Vedlitz, Director & Bob Bullock Chair.... Dean, Liu Shi, John W. Nielson-Gammon and Sammy Zahran. Climate Change, Drought and Policymaking in the U.S. Southern Region. A report prepared by the Institute for Science, Technology and Public Policy in The Bush School of Government and Public...

  18. Modeling Climate and Production-related Impacts on Ice-core Beryllium-10

    E-Print Network [OSTI]

    Modeling Climate and Production-related Impacts on Ice-core Beryllium-10 Christy Veeder Submitted Modeling Climate and Production-related Impacts on Ice-core Beryllium-10 Christy Veeder I use the Goddard Institute for Space Studies ModelE general circulation model to ex- amine the how beryllium-10, a cosmogenic

  19. A mechanism for sun-climate connection Sultan Hameed and Jae N. Lee

    E-Print Network [OSTI]

    Hameed, Sultan

    ]. Systematic changes in the distribution of ozone result in changes in the temperature and pressureA mechanism for sun-climate connection Sultan Hameed and Jae N. Lee Institute for Terrestrial in the sun's energy output during the solar cycle can cause changes in weather and climate have been a puzzle

  20. Quaternary Science Reviews 24 (2005) 533569 New insights into the Weichselian environment and climate of the

    E-Print Network [OSTI]

    Ingólfsson, �lafur

    . The Bykovsky record shows how climate change, and the Last Glacial Maximum in particular, affected terrestrial and climate of the East Siberian Arctic, derived from fossil insects, plants, and mammals$ A.V. Shera,Ã?, S Academy of Sciences (RAS), 33 Leninskiy Prospect, 119071 Moscow, Russia b Paleontological Institute, RAS

  1. Fossil mammals resolve regional patterns of Eurasian climate change over 20 million years

    E-Print Network [OSTI]

    Jernvall, Jukka

    Fossil mammals resolve regional patterns of Eurasian climate change over 20 million years Mikael Institute, Russian Academy of Sciences, Moscow, Russia and 7 Department of Geography, Beijing University proxy that can be used to constrain the regional details of vegetation and climate models. Keywords

  2. June 10, 2013 Canada's energy future meeting demand AND the climate change challenge

    E-Print Network [OSTI]

    Pedersen, Tom

    MEDIA TIP June 10, 2013 Canada's energy future ­meeting demand AND the climate change challenge Energy and business reporters are welcome to attend a high-level energy experts' presentation and panel on "Seeking Common Ground on Canada's Energy Future" during the Pacific Institute for Climate Solutions (PICS

  3. The role of ocean gateways on cooling climate on long time scales Willem P. Sijp a,

    E-Print Network [OSTI]

    Sijp, Willem

    The role of ocean gateways on cooling climate on long time scales Willem P. Sijp a, , Anna S. von Centre of Excellence for Climate System Science, University of New South Wales, Sydney, NSW 2052, Australia b Institute for Marine and Atmospheric Research (IMAU), Department of Physics and Astronomy

  4. Center for Science and Technology Policy Research Cooperative Institute for Research in Environmental Sciences

    E-Print Network [OSTI]

    Colorado at Boulder, University of

    in Environmental Sciences University of Colorado at Boulder UNIVERSITY OF COLORADO Center for Science areas include climate and global change, disasters, nanotechnology, biotechnology, and renewable Institute for Research in Environmental Sciences (CIRES). This report describes the Center's work

  5. Global air quality and climate

    E-Print Network [OSTI]

    2012-01-01T23:59:59.000Z

    Evaluation of Chemistry- Climate Models 5, 2010. 320 S. Wu,and R. Van Dorland, in Climate Change 2007: The PhysicalInter- governmental Panel on Climate Change, ed. D. Qin, M.

  6. Climate Change at Annual Timescales

    E-Print Network [OSTI]

    Stine, Alexander Robin

    2010-01-01T23:59:59.000Z

    1900–93, Journal of Climate, 10 (5), 1004–1020, 1997. Zhou,University of East Anglia’s Climate Research Unit (Jones etand those from WCRP “Climate of the Twentieth Century”

  7. MAPPING CLIMATE CHANGE EXPOSURES, VULNERABILITIES,

    E-Print Network [OSTI]

    MAPPING CLIMATE CHANGE EXPOSURES, VULNERABILITIES, AND ADAPTATION TO PUBLIC HEALTH RISKS's California Climate Change Center JULY 2012 CEC5002012041 Prepared for: California Energy Commission of California. #12; ii ABSTRACT This study reviewed first available frameworks for climate change adaptation

  8. Yeast Genomic Library Genomic DNA Sau3AI partial digestion

    E-Print Network [OSTI]

    Odorizzi, Greg

    Yeast Genomic Library Concept: Genomic DNA ­ Sau3AI partial digestion Vector DNA ­ BamHI full digestion partial Ligate and transform above products Vector Information: · use centromeric plasmid to avoid of the mcs Preparing Vector: 1) digest 3-4ug of library vector with BamHI for 2-4hrs in a total volume of 20

  9. Genome 361: Fundamentals of Genetics and Genomics Spring 2014 Instructors

    E-Print Network [OSTI]

    Dunham, Maitreya

    testing for inherited diseases, human cloning, stem cell research, and genetically modified foods, to name1 Genome 361: Fundamentals of Genetics and Genomics Spring 2014 Instructors Maitreya Dunham.edu Course overview Genetics is the scientific study of heredity. In the last century, many genetic methods

  10. Saint Joseph's University Institute for Environmental Stewardship

    SciTech Connect (OSTI)

    McCann, Michael; Springer, Clint

    2014-06-18T23:59:59.000Z

    Task A: Examination of the physiological, morphological, and reproductive responses of Panicum virgatum (switchgrass) cultivars identified as potential biofuel producing cultivars as well as naturally-occurring varieties of switchgrass to projected changes in climate for the central portion of the United States. This project was a multi-year project set in a field site located at the Konza Prairie Biological Station near Manhattan, KS USA. The major objective of the study was to understand the physiological and growth responses of the important biofuel grass species, Panicum virgatum (switch grass) to simulated changes in precipitation expected for the Central Plains region of the United States. Population level adaptation to broad-scale regional climates or within-population variation in genome size of this genetically and phenotypically diverse C4 grass species may influence the responses to future precipitation variability associated with climate change. Therefore, we investigated switchgrass responses to water variability between natural populations collected across latitudinal gradient and populations. P. virgatum plants from natural populations originating from Kansas, Oklahoma, and Texas received frequent, small precipitation events (“ambient’) or infrequent, large precipitation events (‘altered”) to simulate contrasting rainfall variability expected from this region. We measured leaf-level physiology, aboveground biomass varied significantly by population origin but did not differ by genome size. Our results suggest that trait variation in P. virgatum is primarily attributed to population-level adaptation across latitudinal gradient, not genome size, and that neither population-level adaptation nor genome size may be important predictors of P. virgatum responses to future climatic conditions. Based solely on the data presented here, the most important consideration when deciding what varieties of switchgrass to cultivate for biofuel feedstocks under future climate scenarios is local adaptation and not necessarily genome size as has been hypothesized in the literature. Task B: Installation of an extensive green roof system on the Science Center at Saint Joseph's University for research, research-training and educational outreach activities. An experimental green roof system was designed and installed by an outside contractor (Roofmeadows) on the roof of the Science Center at Saint Joseph's University. The roof system includes four test plots, each with a different drainage system, instrumentation to monitor storm water retention, roof deck temperature, heat flux into and out of the building, rain fall, wind speed and direction, relative humidity and heat emission from the roof system. The vegetative roof was planted with 26 species of plants, distributed throughout the roof area, to assess species/variety growth and coverage characteristics, both in terms of the different drain layer systems, and in terms of the different exposures along the north to south axis of the building. Analysis of the drain layer performance, in terms of storm water retention, shows that the aggregate (stone) drainage layer system performed the best, with the moisture management mat system second, and the geotextile drain layer and reservoir sheet layer systems coming in last. This information is of value in the planning and design of vegetative roof systems since the different types of drainage layer systems have different installation costs and different weights. The different drainage layer systems also seem to be having an impact on plant growth and spread with the test plot with the reservoir sheet layer actually having the poorest plant coverage and plant spread of all areas of the roof studied. Plant growth performance analysis is ongoing, but significant differences have been observed in the third growing season ('13) along the north to south axis, with most species doing better towards the northern end of the roof (in terms of percent ground coverage and plant spread and reproduction). Interestingly, plant growth in all f

  11. Saint Joseph's University Institute for Environmental Stewardship

    SciTech Connect (OSTI)

    McCann, Michael P.; Springer, Clint J.

    2014-06-05T23:59:59.000Z

    Task A: Examination of the physiological, morphological, and reproductive responses of Panicum virgatum (switchgrass) cultivars identified as potential biofuel producing cultivars as well as naturally-occurring varieties of switchgrass to projected changes in climate for the central portion of the United States. This project was a multi-year project set in a field site located at the Konza Prairie Biological Station near Manhattan, KS USA. The major objective of the study was to understand the physiological and growth responses of the important biofuel grass species, Panicum virgatum (switch grass) to simulated changes in precipitation expected for the Central Plains region of the United States. Population level adaptation to broad-scale regional climates or within-population variation in genome size of this genetically and phenotypically diverse C4 grass species may influence the responses to future precipitation variability associated with climate change. Therefore, we investigated switchgrass responses to water variability between natural populations collected across latitudinal gradient and populations. P. virgatum plants from natural populations originating from Kansas, Oklahoma, and Texas received frequent, small precipitation events (“ambient’) or infrequent, large precipitation events (‘altered”) to simulate contrasting rainfall variability expected from this region. We measured leaf-level physiology, aboveground biomass varied significantly by population origin but did not differ by genome size. Our results suggest that trait variation in P. virgatum is primarily attributed to population-level adaptation across latitudinal gradient, not genome size, and that neither population-level adaptation nor genome size may be important predictors of P. virgatum responses to future climatic conditions. Based solely on the data presented here, the most important consideration when deciding what varieties of switchgrass to cultivate for biofuel feedstocks under future climate scenarios is local adaptation and not necessarily genome size as has been hypothesized in the literature. Task B: Installation of an extensive green roof system on the Science Center at Saint Joseph's University for research, research-training and educational outreach activities. An experimental green roof system was designed and installed by an outside contractor (Roofmeadows) on the roof of the Science Center at Saint Joseph's University. The roof system includes four test plots, each with a different drainage system, instrumentation to monitor storm water retention, roof deck temperature, heat flux into and out of the building, rain fall, wind speed and direction, relative humidity and heat emission from the roof system. The vegetative roof was planted with 26 species of plants, distributed throughout the roof area, to assess species/variety growth and coverage characteristics, both in terms of the different drain layer systems, and in terms of the different exposures along the north to south axis of the building. Analysis of the drain layer performance, in terms of storm water retention, shows that the aggregate (stone) drainage layer system performed the best, with the moisture management mat system second, and the geotextile drain layer and reservoir sheet layer systems coming in last. This information is of value in the planning and design of vegetative roof systems since the different types of drainage layer systems have different installation costs and different weights. The different drainage layer systems also seem to be having an impact on plant growth and spread with the test plot with the reservoir sheet layer actually having the poorest plant coverage and plant spread of all areas of the roof studied. Plant growth performance analysis is ongoing, but significant differences have been observed in the third growing season ('13) along the north to south axis, with most species doing better towards the northern end of the roof (in terms of percent ground coverage and plant spread and reproduction). Interestingly, plant growth in all f

  12. Saint Joseph's University Institute for Environmental Stewardship

    SciTech Connect (OSTI)

    McCann, Micahel P.; Springer, Clint J.

    2014-06-03T23:59:59.000Z

    Task A: Examination of the physiological, morphological, and reproductive responses of Panicum virgatum (switchgrass) cultivars identified as potential biofuel producing cultivars as well as naturally-occurring varieties of switchgrass to projected changes in climate for the central portion of the United States. This project was a multi-year project set in a field site located at the Konza Prairie Biological Station near Manhattan, KS USA. The major objective of the study was to understand the physiological and growth responses of the important biofuel grass species, Panicum virgatum (switch grass) to simulated changes in precipitation expected for the Central Plains region of the United States. Population level adaptation to broad-scale regional climates or within-population variation in genome size of this genetically and phenotypically diverse C4 grass species may influence the responses to future precipitation variability associated with climate change. Therefore, we investigated switchgrass responses to water variability between natural populations collected across latitudinal gradient and populations. P. virgatum plants from natural populations originating from Kansas, Oklahoma, and Texas received frequent, small precipitation events (“ambient’) or infrequent, large precipitation events (‘altered”) to simulate contrasting rainfall variability expected from this region. We measured leaf-level physiology, aboveground biomass varied significantly by population origin but did not differ by genome size. Our results suggest that trait variation in P. virgatum is primarily attributed to population-level adaptation across latitudinal gradient, not genome size, and that neither population-level adaptation nor genome size may be important predictors of P. virgatum responses to future climatic conditions. Based solely on the data presented here, the most important consideration when deciding what varieties of switchgrass to cultivate for biofuel feedstocks under future climate scenarios is local adaptation and not necessarily genome size as has been hypothesized in the literature. Task B: Installation of an extensive green roof system on the Science Center at Saint Joseph's University for research, research-training and educational outreach activities. An experimental green roof system was designed and installed by an outside contractor (Roofmeadows) on the roof of the Science Center at Saint Joseph's University. The roof system includes four test plots, each with a different drainage system, instrumentation to monitor storm water retention, roof deck temperature, heat flux into and out of the building, rain fall, wind speed and direction, relative humidity and heat emission from the roof system. The vegetative roof was planted with 26 species of plants, distributed throughout the roof area, to assess species/variety growth and coverage characteristics, both in terms of the different drain layer systems, and in terms of the different exposures along the north to south axis of the building. Analysis of the drain layer performance, in terms of storm water retention, shows that the aggregate (stone) drainage layer system performed the best, with the moisture management mat system second, and the geotextile drain layer and reservoir sheet layer systems coming in last. This information is of value in the planning and design of vegetative roof systems since the different types of drainage layer systems have different installation costs and different weights. The different drainage layer systems also seem to be having an impact on plant growth and spread with the test plot with the reservoir sheet layer actually having the poorest plant coverage and plant spread of all areas of the roof studied. Plant growth performance analysis is ongoing, but significant differences have been observed in the third growing season ('13) along the north to south axis, with most species doing better towards the northern end of the roof (in terms of percent ground coverage and plant spread and reproduction). Interestingly, plant growth in all f

  13. ORIGINAL PAPER The interdisciplinary engineering knowledge genome

    E-Print Network [OSTI]

    Shai, Offer

    ORIGINAL PAPER The interdisciplinary engineering knowledge genome Yoram Reich · Offer Shai Received, termed the ``Interdisciplinary Engineering Knowledge Genome'', which is an organized collection of system, the Interdisciplinary Engineering Knowledge Genome unifies many engineering disciplines, providing a basis

  14. Trichoderma: the genomics of opportunistic success

    E-Print Network [OSTI]

    Druzhinina, Irina S.

    2011-01-01T23:59:59.000Z

    of a fungal prey. BMC Genomics 10, 567 (2009). This studythe TrichoEST functional genomics approach. Curr. Genet. 51,in Hypocrea jecorina. BMC Genomics. 9, 430 (2008) Mukherjee,

  15. Evolutionary Genomics of Salmonella enterica Subspecies

    E-Print Network [OSTI]

    2013-01-01T23:59:59.000Z

    M. 2002. Evolutionary genomics of Salmonella: genesubsystems technology. BMC Genomics 9:75. 23. Ochman H,Salmonella enterica. BMC Genomics 12:425. PubMed. 29. Falush

  16. Tissue sampling and standards for vertebrate genomics

    E-Print Network [OSTI]

    2012-01-01T23:59:59.000Z

    and standards for vertebrate genomics. GigaScience 2012 1:8.transition to conservation genomics. TIG 2010, 26:177–187.Siemens DH: Ecological genomics––changing perspectives on

  17. Genomics and Systems Biology

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative1 First Use of Energy for All Purposes (Fuel and Nonfuel), 2002; Level: National5Sales for4,645U.S. DOE Office of Science (SC) Environmental AssessmentsGeoffrey Campbelllong version)ConfinementGeneralGenomics and

  18. Genome Science/Technologies

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative1 First Use of Energy for All Purposes (Fuel and Nonfuel), 2002; Level: National5Sales for4,645U.S. DOEThe Bonneville Power AdministrationField8,Dist.Newof EnergyFundingGeneGenome Engineering with TALGenome

  19. Genomics and Systems Biology

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative1 First Use of Energy for All Purposes (Fuel and Nonfuel), 2002; Level: National5Sales for4,645U.S. DOEThe Bonneville Power AdministrationField8,Dist.Newof EnergyFundingGeneGenome Engineering withfor

  20. Human Genome Program Image Gallery (from genomics.energy.gov)

    DOE Data Explorer [Office of Scientific and Technical Information (OSTI)]

    This collection contains approximately 240 images from the genome programs of DOE's Office of Science. The images are divided into galleries related to biofuels research, systems biology, and basic genomics. Each image has a title, a basic citation, and a credit or source. Most of the images are original graphics created by the Genome Management Information System (GMIS). GMIS images are recognizable by their credit line. Permission to use these graphics is not needed, but please credit the U.S. Department of Energy Genome Programs and provide the website http://genomics.energy.gov. Other images were provided by third parties and not created by the U.S. Department of Energy. Users must contact the person listed in the credit line before using those images. The high-resolution images can be downloaded.

  1. Climate Sciences: Atmospheric Thermodynamics

    E-Print Network [OSTI]

    Russell, Lynn

    1 Climate Sciences: Atmospheric Thermodynamics Instructor: Lynn Russell, NH343 http://aerosol.ucsd.edu/courses.html Text: Curry & Webster Atmospheric Thermodynamics Ch1 Composition Ch2 Laws Ch3 Transfers Ch12 Energy Climate Sciences: Atmospheric Thermodynamics Instructor: Lynn Russell, NH343 http

  2. Association Genetics of Populus trichocarpa or Resequencing in Populus: Towards Genome Wide Association Genetics (2011 JGI User Meeting)

    SciTech Connect (OSTI)

    Tuskan, Gerry

    2011-03-23T23:59:59.000Z

    The U.S. Department of Energy Joint Genome Institute (JGI) invited scientists interested in the application of genomics to bioenergy and environmental issues, as well as all current and prospective users and collaborators, to attend the annual DOE JGI Genomics of Energy & Environment Meeting held March 22-24, 2011 in Walnut Creek, Calif. The emphasis of this meeting was on the genomics of renewable energy strategies, carbon cycling, environmental gene discovery, and engineering of fuel-producing organisms. The meeting features presentations by leading scientists advancing these topics. Gerry Tuskan of Oak Ridge National Laboratory on "Resequencing in Populus: Towards Genome Wide Association Genetics" at the 6th annual Genomics of Energy & Environment Meeting on March 23, 2011

  3. Association Genetics of Populus trichocarpa or Resequencing in Populus: Towards Genome Wide Association Genetics (2011 JGI User Meeting)

    ScienceCinema (OSTI)

    Tuskan, Gerry

    2011-06-03T23:59:59.000Z

    The U.S. Department of Energy Joint Genome Institute (JGI) invited scientists interested in the application of genomics to bioenergy and environmental issues, as well as all current and prospective users and collaborators, to attend the annual DOE JGI Genomics of Energy & Environment Meeting held March 22-24, 2011 in Walnut Creek, Calif. The emphasis of this meeting was on the genomics of renewable energy strategies, carbon cycling, environmental gene discovery, and engineering of fuel-producing organisms. The meeting features presentations by leading scientists advancing these topics. Gerry Tuskan of Oak Ridge National Laboratory on "Resequencing in Populus: Towards Genome Wide Association Genetics" at the 6th annual Genomics of Energy & Environment Meeting on March 23, 2011

  4. Genome Sequence Databases (Overview): Sequencing and Assembly

    E-Print Network [OSTI]

    Lapidus, Alla L.

    2009-01-01T23:59:59.000Z

    a graphical tool for sequence finishing. Genome Research 8,Multiplexed genotyping with sequence- tagged molecularX. (1996). An improved sequence assembly program. Genomics

  5. Closing Keynote Presentation on the Genomics of Energy and the Environment (JGI Seventh Annual User Meeting 2012: Genomics of Energy and Environment)

    ScienceCinema (OSTI)

    Benner, Stephen [Foundation for Applied Molecular Evolution, Westheimer Institute of Science and Technology

    2013-01-22T23:59:59.000Z

    Steve Benner, a distinguished chemist at the Foundation for Applied Molecular Evolution, Westheimer Institute of Science and Technology, provides the closing keynote address for the JGI 7th Annual Users Meeting: Genomics of Energy & Environment Meeting on March 22, 2012 in Walnut Creek, California.

  6. Closing Keynote Presentation on the Genomics of Energy and the Environment (JGI Seventh Annual User Meeting 2012: Genomics of Energy and Environment)

    SciTech Connect (OSTI)

    Benner, Stephen [Foundation for Applied Molecular Evolution, Westheimer Institute of Science and Technology] [Foundation for Applied Molecular Evolution, Westheimer Institute of Science and Technology

    2012-03-22T23:59:59.000Z

    Steve Benner, a distinguished chemist at the Foundation for Applied Molecular Evolution, Westheimer Institute of Science and Technology, provides the closing keynote address for the JGI 7th Annual Users Meeting: Genomics of Energy & Environment Meeting on March 22, 2012 in Walnut Creek, California.

  7. Pacific Institute for Climate Solutions (PICS) Strategic Research Plan

    E-Print Network [OSTI]

    Pedersen, Tom

    , hosted and led by the University of Victoria (UVic), in collaboration (April 1, 2008 to August 31, 2009)

  8. CCSI SAB Bios 1 January 2012 CLIMATE CHANGE SCIENCE INSTITUTE

    E-Print Network [OSTI]

    Systems Group serving developers of Earth system models at the National Oceanic and Atmospheric], as well as community standards such as the Earth System Modeling Framework and PRISM [Parameter

  9. Divecha Centre for Climate Change Indian Institute of Science

    E-Print Network [OSTI]

    Kumar, Anurag

    widespread melting of high- elevation glaciers and ice caps, particularly in low to middle latitudes and environmental histories from ice core records from both Polar Regions and from low to mid-latitude, high-elevation ice fields. These records demostrate that the current warming at high elevations in the mid- to lower

  10. Ethiopia-Strategic Climate Institutions Programme (SCIP) | Open Energy

    Open Energy Info (EERE)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative Fuels Data Center Home Page onYou are now leaving Energy.gov You are now leaving Energy.gov You are being directedAnnual SiteofEvaluating A PotentialJumpGerman Aerospace Center (DLR) Sector Energy

  11. Institutional Investors Group on Climate Change IIGCC | Open Energy

    Open Energy Info (EERE)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative Fuels Data Center Home Page onYou are now leaving Energy.gov You are now leaving Energy.gov You are beingZealand Jump to: navigation, search OpenEIHesperia,IDGWPIndiantown,Innoferm GmbHCaltech Center for

  12. Mexico National Institute of Ecology and Climate Change (INECC) | Open

    Open Energy Info (EERE)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative Fuels Data Center Home Page onYou are now leaving Energy.gov You are now leaving Energy.gov You are being directedAnnual SiteofEvaluatingGroup |JilinLu an GroupInformation Meier(RedirectedMexican-German

  13. Climate Risk and Financial Institutions | Open Energy Information

    Open Energy Info (EERE)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative Fuels Data Center Home Page onYou are now leaving Energy.gov You are now leaving Energy.gov You are beingZealand JumpConceptual Model, clickInformation SmyrnaNewClayClearSpotYork: EnergyWitham,KnowledgeRisk and

  14. Geophysical Institute biennial report 1995--1996

    SciTech Connect (OSTI)

    NONE

    1998-06-01T23:59:59.000Z

    The mission of the Geophysical Institute is to understand the basic physical processes governing Earth, especially as they occur in, or are relevant to the Arctic; to train graduate and undergraduate students to play leading roles in tomorrow`s society; to solve applied geophysical problems and develop resource-oriented technology of importance to the state and the nation; and to satisfy the intellectual and technological needs of fellow Alaskans through public service. The variety of subjects studied by the faculty, research staff members, and graduate students at the Geophysical Institute include auroral physics and chemistry, arctic haze, ice fog, atmospheric dynamics, ozone, Alaska weather patterns, regional meteorology and climatology, global climate change, cloud physics and radiation, permafrost, glaciers, sea ice, remote sensing, geothermal energy, tectonics, volcanoes and earthquakes. Summaries are presented of the projects undertaken by the Institute in these fields.

  15. Why is climate change so important to the University?

    E-Print Network [OSTI]

    Swain, Peter

    dioxide emissions, make cities more sustainable, and help determine the best policies for governments are exploring innovative ways of modelling climate change and working to understand how atmospheric changes turbines for urban areas and efficient hydrogen fuel cells. · Researchers at the Institute for Aviation

  16. The Potential for Reconstruction of Past Climate of Texas

    E-Print Network [OSTI]

    Yang, Zong-Liang

    ) #12;Texas droughts of the past millennium Palmer Drought Severity Index (PDSI), West Texas Banner etThe Potential for Reconstruction of Past Climate of Texas Jay L. Banner Jackson School of Geosciences Environmental Science Institute University of Texas at Austin First Water Forum, February 13, 2012

  17. SOLAR INFLUENCES ON CLIMATE L. J. Gray,1,2

    E-Print Network [OSTI]

    Lockwood, Mike

    000282. 1. INTRODUCTION [2] The Sun is the source of energy for the Earth's climate system]. There have been substantial increases in our knowledge of each of these areas in recent years and renewed, University of Oxford, Oxford, UK. 3 Swiss Federal Institute for Environmental Science and Technology

  18. Porous Pavement in Cold Climates Part: Performance and Cost

    E-Print Network [OSTI]

    Porous Pavement in Cold Climates Part: Performance and Cost Onondaga Environmental Institute 17 #12;Overview 1. Hydrology of Permeable Pavements 2. Water Quality Performance 3. Hydraulic Performance However, a large number of installations STILL continue to be sub-standard 4 #12;Porous Pavement Design

  19. Dealing in Doubt: The Climate Denial Industry and Climate Science

    E-Print Network [OSTI]

    Fairchild, Mark D.

    Dealing in Doubt: The Climate Denial Industry and Climate Science A Brief History of Attacks action on climate change has become more likely. This time, though, there is a difference. In recent, despite its lack of evidence or scientific support. The last peak in the climate denial campaign

  20. Climate simulators and climate projections Jonathan Rougier1

    E-Print Network [OSTI]

    Dixon, Peter

    Climate simulators and climate projections Jonathan Rougier1 Department of Mathematics University;Abstract We provide a statistical interpretation of current practice in climate mod- elling. This includes: definitions for weather and climate; clarifying the relationship between simulator output and simulator

  1. The role of solar absorption in climate and climate change

    E-Print Network [OSTI]

    1 The role of solar absorption in climate and climate change William Collins UC Berkeley Research Boulder, Colorado, USA #12;2 Prior Research on Absorption and Climate Field Experiments: · Central · Climate with enhanced cloud absorption Synthesis of models and aerosol observations: · Development

  2. Introduction to Metagenomics at DOE JGI: Program Overview and Program Informatics (Metagenomics Informatics Challenges Workshop: 10K Genomes at a Time)

    SciTech Connect (OSTI)

    Tringe, Susannah [DOE JGI] [DOE JGI

    2011-10-12T23:59:59.000Z

    Susannah Tringe of the DOE Joint Genome Institute talks about the Program Overview and Program Informatics at the Metagenomics Informatics Challenges Workshop held at the DOE JGI on October 12-13, 2011

  3. Introduction to Metagenomics at DOE JGI: Program Overview and Program Informatics (Metagenomics Informatics Challenges Workshop: 10K Genomes at a Time)

    ScienceCinema (OSTI)

    Tringe, Susannah [DOE JGI

    2013-01-22T23:59:59.000Z

    Susannah Tringe of the DOE Joint Genome Institute talks about the Program Overview and Program Informatics at the Metagenomics Informatics Challenges Workshop held at the DOE JGI on October 12-13, 2011

  4. Global climatic change

    SciTech Connect (OSTI)

    Houghton, R.A.; Woodwell, G.M.

    1989-04-01T23:59:59.000Z

    This paper reviews the climatic effects of trace gases such as carbon dioxide and methane. It discusses the expected changes from the increases in trace gases and the extent to which the expected changes can be found in the climate record and in the retreat of glaciers. The use of ice cores in correlating atmospheric composition and climate is discussed. The response of terrestrial ecosystems as a biotic feedback is discussed. Possible responses are discussed, including reduction in fossil-fuel use, controls on deforestation, and reforestation. International aspects, such as the implications for developing nations, are addressed.

  5. A deeper look at climate change and national security.

    SciTech Connect (OSTI)

    Baker, Arnold Barry; Backus, George A.; Romig, Alton Dale, Jr.

    2010-03-01T23:59:59.000Z

    Climate change is a long-term process that will trigger a range of multi-dimensional demographic, economic, geopolitical, and national security issues with many unknowns and significant uncertainties. At first glance, climate-change-related national security dimensions seem far removed from today's major national security threats. Yet climate change has already set in motion forces that will require U.S. attention and preparedness. The extent and uncertainty associated with these situations necessitate a move away from conventional security practices, toward a small but flexible portfolio of assets to maintain U.S. interests. Thoughtful action is required now if we are to acquire the capabilities, tools, systems, and institutions needed to meet U.S. national security requirements as they evolve with the emerging stresses and shifts of climate change.

  6. Global climate change: Social and economic research issues

    SciTech Connect (OSTI)

    Rice, M.; Snow, J.; Jacobson, H. [eds.

    1992-05-01T23:59:59.000Z

    This workshop was designed to bring together a group of scholars, primarily from the social sciences, to explore research that might help in dealing with global climate change. To illustrate the state of present understanding, it seemed useful to focus this workshop on three broad questions that are involved in coping with climate change. These are: (1) How can the anticipated economic costs and benefits of climate change be identified; (2) How can the impacts of climate change be adjusted to or avoided; (3) What previously studied models are available for institutional management of the global environment? The resulting discussions may (1) identify worthwhile avenues for further social science research, (2) help develop feedback for natural scientists about research information from this domain needed by social scientists, and (3) provide policymakers with the sort of relevant research information from the social science community that is currently available. Individual papers are processed separately for the database.

  7. Biological Impacts of Climate Change

    E-Print Network [OSTI]

    McCarty, John P.

    Biological Impacts of Climate Change John P McCarty, University of Nebraska at Omaha, Omaha, NE and reproduction depend on how well adapted individuals are to local climate patterns. Climate change can disrupt subsequent impacts on populations or species' distributions across geographic regions. Climate change may

  8. Climatic Change An Interdisciplinary, International

    E-Print Network [OSTI]

    Gvirtzman, Haim

    climate and cultural changes are observed in the Eastern Mediterranean and the Near East [e.g., Bookman et1 23 Climatic Change An Interdisciplinary, International Journal Devoted to the Description, Causes and Implications of Climatic Change ISSN 0165-0009 Volume 112 Combined 3-4 Climatic Change (2012) 112:769-789 DOI

  9. TU DELFT PROCESS TECHNOLOGY INSTITUTE INSTITUTE LECTURE

    E-Print Network [OSTI]

    Lindken, Ralph

    TU DELFT PROCESS TECHNOLOGY INSTITUTE INSTITUTE LECTURE CHEMICAL REACTORS WITH DIRECT HEATING is in contrast with conventional operation of catalytic reactors, where heat is generally supplied through the reactor wall and unnecessary heating of the fluid phase, catalyst support and reactor materials occur

  10. DIABETES, OBESITY AND METABOLISM INSTITUTE

    E-Print Network [OSTI]

    Engman, David M.

    DIABETES, OBESITY AND METABOLISM INSTITUTE AT NORTHWESTERN MEDICINE THE INSTITUTES AT NORTHWESTERN MEDICINE #12;THE INSTITUTES AT NORTHWESTERN MEDICINE DIABETES, OBESITY AND METABOLISM INSTITUTE AT NORTHWESTERN MEDICINE "As we launch the Diabetes, Obesity and Metabolism Institute at Northwestern Medicine, I

  11. Human genome. 1993 Program report

    SciTech Connect (OSTI)

    Not Available

    1994-03-01T23:59:59.000Z

    The purpose of this report is to update the Human Genome 1991-92 Program Report and provide new information on the DOE genome program to researchers, program managers, other government agencies, and the interested public. This FY 1993 supplement includes abstracts of 60 new or renewed projects and listings of 112 continuing and 28 completed projects. These two reports, taken together, present the most complete published view of the DOE Human Genome Program through FY 1993. Research is progressing rapidly toward 15-year goals of mapping and sequencing the DNA of each of the 24 different human chromosomes.

  12. Genomic Aspects of Research Involving Polyploid Plants

    SciTech Connect (OSTI)

    Yang, Xiaohan [ORNL; Ye, Chuyu [ORNL; Tschaplinski, Timothy J [ORNL; Wullschleger, Stan D [ORNL; Tuskan, Gerald A [ORNL

    2011-01-01T23:59:59.000Z

    Almost all extant plant species have spontaneously doubled their genomes at least once in their evolutionary histories, resulting in polyploidy which provided a rich genomic resource for evolutionary processes. Moreover, superior polyploid clones have been created during the process of crop domestication. Polyploid plants generated by evolutionary processes and/or crop domestication have been the intentional or serendipitous focus of research dealing with the dynamics and consequences of genome evolution. One of the new trends in genomics research is to create synthetic polyploid plants which provide materials for studying the initial genomic changes/responses immediately after polyploid formation. Polyploid plants are also used in functional genomics research to study gene expression in a complex genomic background. In this review, we summarize the recent progress in genomics research involving ancient, young, and synthetic polyploid plants, with a focus on genome size evolution, genomics diversity, genomic rearrangement, genetic and epigenetic changes in duplicated genes, gene discovery, and comparative genomics. Implications on plant sciences including evolution, functional genomics, and plant breeding are presented. It is anticipated that polyploids will be a regular subject of genomics research in the foreseeable future as the rapid advances in DNA sequencing technology create unprecedented opportunities for discovering and monitoring genomic and transcriptomic changes in polyploid plants. The fast accumulation of knowledge on polyploid formation, maintenance, and divergence at whole-genome and subgenome levels will not only help plant biologists understand how plants have evolved and diversified, but also assist plant breeders in designing new strategies for crop improvement.

  13. A Statistical Framework for Spatial Comparative Genomics

    E-Print Network [OSTI]

    A Statistical Framework for Spatial Comparative Genomics Rose Hoberman May 2007 CMU-CS-07, or the U.S. Government. #12;Keywords: spatial comparative genomics, comparative genomics, gene clusters, max-gap clusters, gene teams, whole genome duplication, paralogons, synteny, ortholog detection #12

  14. Genomics and ornithology Scott V. Edwards

    E-Print Network [OSTI]

    Edwards, Scott

    REVIEW Genomics and ornithology Scott V. Edwards Received: 23 September 2007 / Accepted: 27 Genomics is revolutionizing ornithology in the same ways it is reinvigorating other biological disciplines. In this review, I will highlight applications of genomics and genomics technologies to the study of the ecology

  15. 2004 Structural, Function and Evolutionary Genomics

    SciTech Connect (OSTI)

    Douglas L. Brutlag Nancy Ryan Gray

    2005-03-23T23:59:59.000Z

    This Gordon conference will cover the areas of structural, functional and evolutionary genomics. It will take a systematic approach to genomics, examining the evolution of proteins, protein functional sites, protein-protein interactions, regulatory networks, and metabolic networks. Emphasis will be placed on what we can learn from comparative genomics and entire genomes and proteomes.

  16. Assignment of Orthologous Genes via Genome Rearrangement

    E-Print Network [OSTI]

    Lonardi, Stefano

    Assignment of Orthologous Genes via Genome Rearrangement Xin Chen, Jie Zheng, Zheng Fu, Peng Nan of genomes is a fundamental and challenging problem in comparative genomics. Existing methods that assign sequence similarity and evolutionary events at a genome level, where orthologous genes are assumed

  17. Extreme Genomics By Scouring the Genomes of 50 HIV-Resistant People, Study

    E-Print Network [OSTI]

    Dolbow, John

    Extreme Genomics By Scouring the Genomes of 50 HIV-Resistant People, Study Takes Aim at Rare Gene Genome Variation, and his colleagues think that the complete genome sequences of those fortunate few against the viral strain that usually infects humans. That's because the CCR5 protein is Extreme Genomics

  18. Growth Temperature and Genome Size in Bacteria Are Negatively Correlated, Suggesting Genomic Streamlining

    E-Print Network [OSTI]

    Wagner, Andreas

    Growth Temperature and Genome Size in Bacteria Are Negatively Correlated, Suggesting Genomic.wagner@ieu.uzh.ch; nsabath@gmail.com. Accepted: March 25, 2013 Abstract Prokaryotic genomes are small and compact. Either this feature is caused by neutral evolution or by natural selection favoring small genomes--genome streamlining

  19. The Genome Database Organism-centered listing of available genomic sequence records and projects

    E-Print Network [OSTI]

    Levin, Judith G.

    The Genome Database Organism-centered listing of available genomic sequence records and projects http://www.ncbi.nlm.nih.gov/genome National Center for Biotechnology Information · National Library | NCBI Genome | Last Update August 19, 2013 Contact: info@ncbi.nlm.nih.gov Scope Since 2011, the Genome

  20. Chapter 14: Genome Assembly and Annotation Process Annotation of other genomes

    E-Print Network [OSTI]

    Levin, Judith G.

    Chapter 14: Genome Assembly and Annotation Process Paul Kitts Summary Box 1 Annotation of other genomes NCBI may assemble a genome prior to annotation, add annotations to a genome assembled elsewhere, or simply process an annotated genome to produce RefSeqs and maps for display in Map Viewer (Chapter 20

  1. Climate Change Adaptation Planning

    Office of Energy Efficiency and Renewable Energy (EERE)

    This course provides an introduction to planning for climate change impacts, with examples of tribes that have been going through the adaptation planning process. The course is intended for tribal...

  2. Cool Farming: Climate impacts

    E-Print Network [OSTI]

    Levi, Ran

    Cool Farming: Climate impacts of agriculture and mitigation potential greenpeace.org Campaigningfor meat categories as well as milk and selected plant products for comparison. 36 Figure 1: Total global

  3. Climate Action Plan (Vermont)

    Broader source: Energy.gov [DOE]

    There is a growing scientific consensus that increasing emissions of greenhouse gases to the atmosphere are affecting the temperature and variability of the Earth’s climate. Recognizing the...

  4. Climate Action Plan (Michigan)

    Broader source: Energy.gov [DOE]

    On November 14, 2007, Governor Jennifer M. Granholm issued Executive Order No. 2007-42 establishing the Michigan Climate Action Council (MCAC). The Council is comprised of members representing...

  5. Refining climate models

    ScienceCinema (OSTI)

    Warren, Jeff; Iversen, Colleen; Brooks, Jonathan; Ricciuto, Daniel

    2014-06-26T23:59:59.000Z

    Using dogwood trees, Oak Ridge National Laboratory researchers are gaining a better understanding of the role photosynthesis and respiration play in the atmospheric carbon dioxide cycle. Their findings will aid computer modelers in improving the accuracy of climate simulations.

  6. Climate Action Plan (Minnesota)

    Broader source: Energy.gov [DOE]

    Recognizing the implications that global climate change may have on the economy, environment and quality of life in Minnesota, Governor Tim Pawlenty signed into law the 2007 Next Generation Energy...

  7. Refining climate models

    SciTech Connect (OSTI)

    Warren, Jeff; Iversen, Colleen; Brooks, Jonathan; Ricciuto, Daniel

    2012-10-31T23:59:59.000Z

    Using dogwood trees, Oak Ridge National Laboratory researchers are gaining a better understanding of the role photosynthesis and respiration play in the atmospheric carbon dioxide cycle. Their findings will aid computer modelers in improving the accuracy of climate simulations.

  8. Climate VISION: Events

    Office of Scientific and Technical Information (OSTI)

    Efficiency and CO2 Intensity Improvement (PDF 24 KB) October 24-26, 2005 12th Annual EPA Natural Gas STAR Workshop September 28-30, 2005 Climate RESOLVE GHG Management Workshop...

  9. Challenges in Whole-Genome Annotation of Pyrosequenced Eukaryotic Genomes

    SciTech Connect (OSTI)

    Kuo, Alan; Grigoriev, Igor

    2009-04-17T23:59:59.000Z

    Pyrosequencing technologies such as 454/Roche and Solexa/Illumina vastly lower the cost of nucleotide sequencing compared to the traditional Sanger method, and thus promise to greatly expand the number of sequenced eukaryotic genomes. However, the new technologies also bring new challenges such as shorter reads and new kinds and higher rates of sequencing errors, which complicate genome assembly and gene prediction. At JGI we are deploying 454 technology for the sequencing and assembly of ever-larger eukaryotic genomes. Here we describe our first whole-genome annotation of a purely 454-sequenced fungal genome that is larger than a yeast (>30 Mbp). The pezizomycotine (filamentous ascomycote) Aspergillus carbonarius belongs to the Aspergillus section Nigri species complex, members of which are significant as platforms for bioenergy and bioindustrial technology, as members of soil microbial communities and players in the global carbon cycle, and as agricultural toxigens. Application of a modified version of the standard JGI Annotation Pipeline has so far predicted ~;;10k genes. ~;;12percent of these preliminary annotations suffer a potential frameshift error, which is somewhat higher than the ~;;9percent rate in the Sanger-sequenced and conventionally assembled and annotated genome of fellow Aspergillus section Nigri member A. niger. Also,>90percent of A. niger genes have potential homologs in the A. carbonarius preliminary annotation. Weconclude, and with further annotation and comparative analysis expect to confirm, that 454 sequencing strategies provide a promising substrate for annotation of modestly sized eukaryotic genomes. We will also present results of annotation of a number of other pyrosequenced fungal genomes of bioenergy interest.

  10. Institute for Materials Science

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Institute for Material Science Who we are and what we do 2:23 Institute for Materials Science: Alexander V. Balatsky IMS is an interdisciplinary research and educational center...

  11. Institute for ADVANCED STUDY

    E-Print Network [OSTI]

    · PROGRAM IN THEORETICAL BIOLOGY 103 · REPORT OF THE INSTITUTE LIBRARIES 107 INSTITUTE FOR ADVANCED STUDY Study has sustained its founding principle for seventy years. This com- mitment his yielded

  12. Synthetic Genomics: Options for Governance

    E-Print Network [OSTI]

    Garfinkel, Michele

    2007-10-17T23:59:59.000Z

    Gene and genome synthesis, that is, constructing long stretches of DNA from constituent chemicals, provides scientists with new and unparalleled capabilities both for understanding biology and for using it for beneficial ...

  13. EASA Institute of Advanced Studies on Sustainability, Munich -Germany ResponseResponse

    E-Print Network [OSTI]

    Mosegaard, Klaus

    EASA Institute of Advanced Studies on Sustainability, Munich - Germany ResponseResponse ofof WaterClimate Change Peter A. Wilderer Munich, Germany L. A. Colding Lecture, DTU Lyngby, Denmark, 19-06-2007 #12;EASA Institute of Advanced Studies on Sustainability, Munich - Germany content some general thoughts WS&T ­ long

  14. The National Cancer Institute,

    E-Print Network [OSTI]

    The National Cancer Institute, International Cancer Information Center Bldg. 82, Rm 123 Bethesda, MD 20892 The National Cancer Institute (NCI) is part of the Federal Government. NCI coordinates the government's cancer research program. It is the largest of the 17 biomedical research institutes and centers

  15. OIL & GAS INSTITUTE Introduction

    E-Print Network [OSTI]

    Mottram, Nigel

    OIL & GAS INSTITUTE CONTENTS Introduction Asset Integrity Underpinning Capabilities 2 4 4 6 8 9 10 COMPETITIVENESS UNIVERSITY of STRATHCLYDE OIL & GAS INSTITUTE OIL & GAS EXPERTISE AND PARTNERSHIPS #12;1 The launch of the Strathclyde Oil & Gas Institute represents an important step forward for the University

  16. institution-logo Introduction

    E-Print Network [OSTI]

    Langerhans, Brian

    institution-logo Introduction Model Selection Experimental Design Bacteremia Summary Experimental in Validating Models of Infectious Diseases #12;institution-logo Introduction Model Selection Experimental Summary D. M. Bortz Experimental Design in Validating Models of Infectious Diseases #12;institution-logo

  17. Glass Sponges and Bilaterian Animals Share Derived Mitochondrial Genomic Features: A Common Ancestry or Parallel Evolution?

    E-Print Network [OSTI]

    Lavrov, Dennis V.

    Glass Sponges and Bilaterian Animals Share Derived Mitochondrial Genomic Features: A Common Oceanographic Institution, Fort Pierce, Florida Glass sponges (Hexactinellida) are a group of deep-water benthic glass sponges and bilaterian animals, including an Arg / Ser change in the genetic code

  18. Amplification of Genomic DNA from Single Cells using Multiple Displacement Amplification

    SciTech Connect (OSTI)

    Lasken, Roger [J. Craig Venter Institute

    2010-06-04T23:59:59.000Z

    Roger Lasken of the J. Craig Venter Institute discusses the combined use of single cell genomics and metagenomics as well as methods for single-cell sequencing on June 4, 2010 at the "Sequencing, Finishing, Analysis in the Future" meeting in Santa Fe, NM

  19. Genomic neighbourhood and the regulation of gene expression Genomic neighbourhood and transcriptional regulation

    E-Print Network [OSTI]

    Babu, M. Madan

    Genomic neighbourhood and the regulation of gene expression Genomic neighbourhood and transcriptional regulation Subhajyoti De and M. Madan Babu MRC Laboratory of Molecular Biology, Hills Road..................................................................................................................................................................................1 2. Genomic neighbourhood and its influence on gene regulation

  20. Implications of structural genomics target selection strategies: Pfam5000, whole genome, and random approaches

    E-Print Network [OSTI]

    Chandonia, John-Marc; Brenner, Steven E.

    2004-01-01T23:59:59.000Z

    SK, Bonanno JB. Structural genomics. Methods Biochem AnalMizuguchi K. Structural genomics: an overview. Prog BiophysSE. A tour of structural genomics. Nat Rev Genet 2001;2(10):

  1. Sandia National Laboratories: Climate/Environment

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    ClimateEnvironment ClimateEnvironment On January 27, 2011, in ClimateEnvironment Sensing and Monitoring Modeling and Analysis Carbon Management Water & Environment Publications...

  2. 15.023J / 12.848J / ESD.128J Global Climate Change: Economics, Science, and Policy, Spring 2007

    E-Print Network [OSTI]

    Jacoby, Henry D.

    Introduces scientific, economic, and ecological issues underlying the threat of global climate change, and the institutions engaged in negotiating an international response. Develops an integrated approach to analysis of ...

  3. An Integrated Assessment Framework for Uncertainty Studies in Global and Regional Climate Change: The IGSM-CAM

    E-Print Network [OSTI]

    Monier, Erwan

    2012-06-18T23:59:59.000Z

    This paper describes an integrated assessment framework for uncertainty studies in global and regional climate change. In this framework, the Massachusetts Institute of Technology (MIT) Integrated Global System Model (IGSM), ...

  4. 15.023J / 12.848J / ESD.128J Global Climate Change: Economics, Science, and Policy, Spring 2004

    E-Print Network [OSTI]

    Jacoby, Henry D.

    Introduces scientific, economic, and ecological issues underlying the threat of global climate change, and the institutions engaged in negotiating an international response. Develops an integrated approach to analysis of ...

  5. Comparative Genome Structure, Secondary Metabolite, and Effector Coding Capacity across Cochliobolus Pathogens

    SciTech Connect (OSTI)

    Condon, Bradford J.; Leng, Yueqiang; Wu, Dongliang; Bushley, Kathryn E.; Ohm, Robin A.; Otillar, Robert; Martin, Joel; Schackwitz, Wendy; Grimwood, Jane; MohdZainudin, NurAinlzzati; Xue, Chunsheng; Wang, Rui; Manning, Viola A.; Dhillon, Braham; Tu, Zheng Jin; Steffenson, Brian J.; Salamov, Asaf; Sun, Hui; Lowry, Steve; LaButti, Kurt; Han, James; Copeland, Alex; Lindquist, Erika; Barry, Kerrie; Schmutz, Jeremy; Baker, Scott E.; Ciuffetti, Lynda M.; Grigoriev, Igor V.; Zhong, Shaobin; Turgeon, B. Gillian

    2012-05-02T23:59:59.000Z

    The genomes of five Cochliobolus heterostrophus strains, two Cochliobolus sativus strains, three additional Cochliobolus species (Cochliobolus victoriae, Cochliobolus carbonum, Cochliobolus miyabeanus), and closely related Setosphaeria turcica were sequenced at the Joint Genome Institute (JGI). The datasets were used to identify SNPs between strains and species, unique genomic regions, core secondary metabolism genes, and small secreted protein (SSP) candidate effector encoding genes with a view towards pinpointing structural elements and gene content associated with specificity of these closely related fungi to different cereal hosts. Whole-genome alignment shows that three to five of each genome differs between strains of the same species, while a quarter of each genome differs between species. On average, SNP counts among field isolates of the same C. heterostrophus species are more than 25 higher than those between inbred lines and 50 lower than SNPs between Cochliobolus species. The suites of nonribosomal peptide synthetase (NRPS), polyketide synthase (PKS), and SSP encoding genes are astoundingly diverse among species but remarkably conserved among isolates of the same species, whether inbred or field strains, except for defining examples that map to unique genomic regions. Functional analysis of several strain-unique PKSs and NRPSs reveal a strong correlation with a role in virulence.

  6. Genomics of emerging infectious disease: A PLoS collection.

    E-Print Network [OSTI]

    Eisen, Jonathan A; MacCallum, Catriona J

    2009-01-01T23:59:59.000Z

    Origins and evolutionary genomics of the 2009 swine-originan Infectious Diseases Genomics Project predict and preventRavel J (2009) The role of genomics in the identification,

  7. TOPSAN: a collaborative annotation environment for structural genomics.

    E-Print Network [OSTI]

    Weekes, Dana; Krishna, S; Bakolitsa, Constantina; Wilson, Ian A; Godzik, Adam; Wooley, John

    2010-01-01T23:59:59.000Z

    environment for structural genomics Dana Weekes 1† , S Srihigh-throughput structural genomics centers, despite theirbeing determined by structural genomics centers and high-

  8. Comparative genomics reveals diversity among xanthomonads infecting tomato and pepper

    E-Print Network [OSTI]

    2011-01-01T23:59:59.000Z

    Potnis et al. : Comparative genomics reveals diversity amongtomato and pepper. BMC Genomics Submit your next manuscriptpv. syringae Potnis et al. BMC Genomics 2011, 12:146 http://

  9. Dissection of Plant Defense Mechanisms Using Chemical and Molecular Genomics

    E-Print Network [OSTI]

    Rodriguez-Salus, Melinda Sue

    2012-01-01T23:59:59.000Z

    of auxins by a chemical genomics approach." Journal ofadvances in chemical genomics." Current Medicinal Chemistrymolecular and chemical genomics." Phytopathology 97(7): S58-

  10. Validation in Genomics: CpG Island Methylation Revisited

    E-Print Network [OSTI]

    Segal, Mark R

    2006-01-01T23:59:59.000Z

    analysis. In: Functional Genomics: Methods and Protocols, M.Segal: Validation in Genomics: CpG Island Methylationpackage and applications to genomics. Bioinformatics and

  11. Incorporating Genomics and Bioinformatics across the Life Sciences Curriculum

    E-Print Network [OSTI]

    Ditty, Jayna L.

    2012-01-01T23:59:59.000Z

    Page Incorporating Genomics and Bioinformatics across the2007) Discovering Genomics, Proteomics, and Bioinformatics,2003) Public access for teaching genomics, proteomics, and

  12. MicrobesOnline: an integrated portal for comparative functional genomics

    E-Print Network [OSTI]

    Joachimiak, Marcin P.

    2014-01-01T23:59:59.000Z

    comparative functional genomics Marcin P. Joachimiak 1,2 ,for comparative functional genomics of bacteria and archaea.publicly avail- able functional genomics data from published

  13. Microbes Online: an integrated portal for comparative functional genomics

    E-Print Network [OSTI]

    Arkin, Adam P.

    2014-01-01T23:59:59.000Z

    comparative functional genomics of bacteria, archaea, fungifor comparative functional genomics Paramvir S. Dehal 1,2* (and Environmental Research, Genomics:GTL program through

  14. additional structural genome: Topics by E-print Network

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    a mitochondrial genome Archibald, John 3 Protein structure prediction and structural genomics CiteSeer Summary: Genome sequencing projects are producing linear amino acid...

  15. ancient human genome: Topics by E-print Network

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    permafrost-preserved hair, the genome technologies have initiated an era of personal genomics. Eight human genome sequences have been reported so far Nielsen, Rasmus 3 A large...

  16. analyses genomes comparison: Topics by E-print Network

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    %) of coding sequence, the human genome encodes only 3%, while 13 COMPUTATIONAL GENOMICS: MAPPING, COMPARISON, AND ANNOTATION OF GENOMES Biotechnology Websites Summary:...

  17. ancient genome duplication: Topics by E-print Network

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    permafrost-preserved hair, the genome technologies have initiated an era of personal genomics. Eight human genome sequences have been reported so far Nielsen, Rasmus 8 Gene &...

  18. Comparative Genomics of Gossypium spp. through GBS and Candidate Genes – Delving into the Controlling Factors behind Photoperiodic Flowering 

    E-Print Network [OSTI]

    Young, Carla Jo Logan

    2013-08-09T23:59:59.000Z

    COMPARATIVE GENOMICS OF GOSSYPIUM SPP. THROUGH GBS AND CANDIDATE GENES ? DELVING INTO THE CONTROLLING FACTORS BEHIND PHOTOPERIODIC FLOWERING A Dissertation by CARLA JO LOGAN YOUNG Submitted to the Office of Graduate Studies of Texas A.../Deletion Polymorphism IPGB Institute for Plant Genomics and Biotechnology Ka Non-synonymous Nucleotide Substitution Rate kb Kilobase(s) kDa KiloDalton Ks Synonymous Nucleotide Substitution Rate LD Long Day LD Linkage Disequilibrium MAS Marker Assisted...

  19. Comparative Genomics of Gossypium spp. through GBS and Candidate Genes – Delving into the Controlling Factors behind Photoperiodic Flowering

    E-Print Network [OSTI]

    Young, Carla Jo Logan

    2013-08-09T23:59:59.000Z

    COMPARATIVE GENOMICS OF GOSSYPIUM SPP. THROUGH GBS AND CANDIDATE GENES ? DELVING INTO THE CONTROLLING FACTORS BEHIND PHOTOPERIODIC FLOWERING A Dissertation by CARLA JO LOGAN YOUNG Submitted to the Office of Graduate Studies of Texas A.../Deletion Polymorphism IPGB Institute for Plant Genomics and Biotechnology Ka Non-synonymous Nucleotide Substitution Rate kb Kilobase(s) kDa KiloDalton Ks Synonymous Nucleotide Substitution Rate LD Long Day LD Linkage Disequilibrium MAS Marker Assisted...

  20. Utilization of Science-Based Information on Climate Change in Decision Making and the Public Policy Process - Phase 2

    E-Print Network [OSTI]

    Vedlitz, Arnold; Lindquist, Eric; Liu, Xinsheng; Zahran, Sammy; Wood, B. Dan; Alston, Letitia T.; North, Gerald

    2013-12-19T23:59:59.000Z

    . Public?s Views about the Impact of Climate Change ....................................................... 4 Figure 2. Time Frame for Global Warming/Climate Change to Exert Significant Impact on the US... Negative?Health?Impact Negative?Economic? Impact Negative?Environmental? Impact Institute for Science, Technology and Public Policy ? The Bush School ? Texas A&M University 5 When surveyed as to the time frame for global warming/climate change to exert a...

  1. NEW WORK AND STUDY OPPORTUNITIES IN CLIMATE CHANGE Climate System Analysis Group (CSAG)

    E-Print Network [OSTI]

    Cohen, Ronald C.

    . - Postdoc: Climate modeling - Postdoc: Climate change information communication and dissemination - Research Associate: Climate change information communication and dissemination - PhD: Climate change information communication and dissemination - MSc/PhD: Physical science of climate change What to expect: Successful

  2. Debating Climate Change

    SciTech Connect (OSTI)

    Malone, Elizabeth L.

    2009-11-01T23:59:59.000Z

    Debating Climate Change explores, both theoretically and empirically, how people argue about climate change and link to each other through various elements in their arguments. As science is a central issue in the debate, the arguments of scientists and the interpretations and responses of non-scientists are important aspects of the analysis. The book first assesses current thinking about the climate change debate and current participants in the debates surrounding the issue, as well as a brief history of various groups’ involvements. Chapters 2 and 3 distill and organize various ways of framing the climate change issue. Beginning in Chapter 4, a modified classical analysis of the elements carried in an argument is used to identify areas and degrees of disagreement and agreement. One hundred documents, drawn from a wide spectrum of sources, map the topic and debate space of the climate change issue. Five elements of each argument are distilled: the authority of the writer, the evidence presented, the formulation of the argument, the worldview presented, and the actions proposed. Then a social network analysis identifies elements of the arguments that point to potential agreements. Finally, the book suggests mechanisms by which participants in the debate can build more general agreements on elements of existing agreement.

  3. Recent Climate Changes in Precipitable Water in the Global Tropics as Revealed in NCEP/NCAR Reanalysis

    E-Print Network [OSTI]

    Hawai'i at Manoa, University of

    1 Recent Climate Changes in Precipitable Water in the Global Tropics as Revealed in NCEP: 1 (808) 956-2877 Email: chu@hawaii.edu #12;2 Abstract For the first time, long-term climate changes/NCAR Reanalysis Igor I. Zveryaev and Pao-Shin Chu* P.P. Shirshov Institute of Oceanology, RAS, Moscow, Russia

  4. Indian Institute of Technology Bombay INDIAN INSTITUTE OF TECHNOLOGY BOMBAY

    E-Print Network [OSTI]

    Narayanan, H.

    Indian Institute of Technology Bombay INDIAN INSTITUTE OF TECHNOLOGY BOMBAY INVITATION Description of work Estimated cost (1) (2) (3) 1 Construction of Institutional/Residential buildings, external development, HVAC, Elevators etc. for Indian Institute of Technology Bombay, at the campus

  5. Addressing the Omics Data Explosion: a Comprehensive Reference Genome Representation and the Democratization of Comparative Genomics and Immunogenomics

    E-Print Network [OSTI]

    Nguyen, Ngan Kim

    2014-01-01T23:59:59.000Z

    Hubs: Web Accessible Browsers for Compar- ative Genomics 3.1Comparative Genomics Analyses . . . . . . . . . . . . . .browsers for comparative genomics” B.1 E. coli KO11FL 162099

  6. Earth Science Week 2009, "Understanding Climate", Highlights and News Clippings

    SciTech Connect (OSTI)

    Robeck, Edward C. [American Geological Institute; Coulson, Doug [PS International

    2010-01-05T23:59:59.000Z

    The American Geological Institute (AGI) proposes to expand its influential Earth Science Week Program in 2009, with the support of the U.S. Department of Energy, to disseminate DOE's key messages, information, and resources on climate education and to include new program components. These components, ranging from online resources to live events and professional networks, would significantly increase the reach and impact of AGI's already successful geoscience education and public awareness effort in the United States and abroad in 2009, when the campaign's theme will be "Understanding Climate."

  7. First Steps Toward a Quality of Climate Finance Scorecard (QUODA-CF): Creating a Comparative Index to Assess International Climate Finance Contributions

    SciTech Connect (OSTI)

    Sierra, Katherine; Roberts, Timmons; de Nevers, Michele; Langley, Claire; Smith, Cory

    2013-06-15T23:59:59.000Z

    Are climate finance contributor countries, multilateral aid agencies and specialized funds using widely accepted best practices in foreign assistance? How is it possible to measure and compare international climate finance contributions when there are as yet no established metrics or agreed definitions of the quality of climate finance? As a subjective metric, quality can mean different things to different stakeholders, while of donor countries, recipients and institutional actors may place quality across a broad spectrum of objectives. This subjectivity makes the assessment of the quality of climate finance contributions a useful and necessary exercise, but one that has many challenges. This work seeks to enhance the development of common definitions and metrics of the quality of climate finance, to understand what we can about those areas where climate finance information is available and shine a light on the areas where there is a severe dearth of data. Allowing for comparisons of the use of best practices across funding institutions in the climate sector could begin a process of benchmarking performance, fostering learning across institutions and driving improvements when incorporated in internal evaluation protocols of those institutions. In the medium term, this kind of benchmarking and transparency could support fundraising in contributor countries and help build trust with recipient countries. As a feasibility study, this paper attempts to outline the importance of assessing international climate finance contributions while describing the difficulties in arriving at universally agreed measurements and indicators for assessment. In many cases, data are neither readily available nor complete, and there is no consensus on what should be included. A number of indicators are proposed in this study as a starting point with which to analyze voluntary contributions, but in some cases their methodologies are not complete, and further research is required for a robust measurement tool to be created.

  8. UK Climate Change Risk Assessment and National

    E-Print Network [OSTI]

    Wirosoetisno, Djoko

    UK Climate Change Risk Assessment and National Adaptation Programme Meg Patel Defra #12 change #12;Weather & climate impacts - economic, societal, environmental Water consumption per capita;Legislative Framework Climate Change Act 2008 Adaptation Reporting Power 2011 Climate Change Risk Assessment

  9. COPENHAGEN CONSENSUS ON CLIMATE A Perspective Paper on Climate

    E-Print Network [OSTI]

    Colorado at Boulder, University of

    of Carbon Capture as a Response to Climate Change Roger Pielke, Jr. #12;COPENHAGEN CONSENSUS ON CLIMATE Engineering, Including an Analysis of Carbon Capture as a Response to Climate Change #12;AbstrAct PReface but not accurate. Second, it summarizes an analysis of the potential role for air capture technologies to play

  10. Climate Extremes, Uncertainty and Impacts Climate Change Challenge: The Fourth Assessment Report of the Intergovernmental Panel on Climate Change

    E-Print Network [OSTI]

    Climate Extremes, Uncertainty and Impacts Climate Change Challenge: The Fourth Assessment Report of the Intergovernmental Panel on Climate Change (IPCC, AR4) has resulted in a wider acceptance of global climate change climate extremes and change impacts. Uncertainties in process studies, climate models, and associated

  11. Status of Climate Change

    E-Print Network [OSTI]

    North, G.

    2013-01-01T23:59:59.000Z

    Status of Climate Change 2013 CaTee Conference San Antonio 2013 ESL-KT-13-12-56 CATEE 2013: Clean Air Through Energy Efficiency Conference, San Antonio, Texas Dec. 16-18 Menu for Today • IPCC 2013: Assessment Report #5 • Facts about Climate Change... • Who will Win, Who will Lose • What Needs to be Done ESL-KT-13-12-56 CATEE 2013: Clean Air Through Energy Efficiency Conference, San Antonio, Texas Dec. 16-18 IPCC #5 • No great surprises - Sharper language • Uncertainties are still large • Essentially...

  12. Climate change cripples forests

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative1 First Use of Energy for All Purposes (Fuel and Nonfuel), 2002; Level: National5Sales for4,645 3,625govInstrumentstdmadapInactiveVisiting the TWPSuccessAlamosCharacterization2 PermitClean0ClimateClimate Change

  13. Climate change cripples forests

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative1 First Use of Energy for All Purposes (Fuel and Nonfuel), 2002; Level: National5Sales for4,645 3,625govInstrumentstdmadapInactiveVisiting the TWPSuccessAlamosCharacterization2 PermitClean0ClimateClimate

  14. Climate Change | Department of Energy

    Broader source: Energy.gov (indexed) [DOE]

    Climate Change Climate Change September 16, 2014 C3E Spotlights Women Leaders in Clean Energy Careers Women clean energy leaders convene in Boston for the Women in Clean Energy...

  15. Session Title Climate Smart Agriculture

    E-Print Network [OSTI]

    Barnes, Elizabeth A.

    Session Title Climate Smart Agriculture Session Date Khosla (moderator) Professor, Soil and Crop Sciences College of Agricultural Climate Smart Agriculture is a multi-disciplinary approach to practice agriculture

  16. Climate Change and National Security

    E-Print Network [OSTI]

    Alyson, Fleming; Summer, Kelly; Summer, Martin; Lauren, Franck; Jonathan, Mark

    2015-01-01T23:59:59.000Z

    of climate change, energy security and economic stability.DoD is improving U.S. energy security and national security.www.greenpacks.org • Energy Security & Climate Change:

  17. Climate Action Plan (New Orleans)

    Broader source: Energy.gov [DOE]

    New Orleans' Climate Action Plan will provide a road map to reach the City's greenhouse gas (GHG) reduction goal by 2030 while orchestrating its adaptation to climate change. The CAP will outline...

  18. Climate Action Plan (Ontario, Canada)

    Broader source: Energy.gov [DOE]

    Climate Ready, Ontario's Adaptation Strategy and Action Plan, outlines the problems, goals, and key strategies for the province's approach to climate change and the problems it poses. The Plan...

  19. Farming: A Climate Change Culprit

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Farming: A Climate Change Culprit Farming: A Climate Change Culprit Simulations run at NERSC show impact of land-use change on African monsoon precipitation June 7, 2014 | Tags:...

  20. Climate shocks: Natural and anthropogenic

    SciTech Connect (OSTI)

    Kondratyev, K.Ya.

    1988-01-01T23:59:59.000Z

    Much recent climate research has focused on the effects of CO{sub 2} and radiatively important trace species, volcanic eruptions, and nuclear exchanges on our future climate. These studies suggest that anthropogenic influence will alter our present climate. The reliability of the climate models are a subject of debate, yet valid information derived from climate models is critical for policy-makers and politicians to make decisions regarding energy use and development and defense strategies. K.Ya. Kondratyev, a leading Soviet climate scientist, addresses the role of the greenhouse effect, nuclear winter, and volcanic eruptions on our climate in a recently published book entitled Climate Shocks: Natural and Anthropogenic. The book provides a detailed survey of the literature on these fields, including the pertinent Soviet literature that is often not surveyed by Western scientists.

  1. 1, 231253, 2005 Synoptic climate

    E-Print Network [OSTI]

    Boyer, Edmond

    CPD 1, 231­253, 2005 Synoptic climate change as driver of New Zealand glaciation H. Rother and J / Esc Print Version Interactive Discussion EGU Climate of the Past Discussions, 1, 231­253, 2005 www.climate-of-the-past.net/cpd/1/231/ SRef-ID: 1814-9359/cpd/2005-1-231 European Geosciences Union Climate of the Past Discussions

  2. Climate Action Plan (Manitoba, Canada)

    Broader source: Energy.gov [DOE]

    Manitoba's Climate Action Plan centers around energy efficiency, although it includes mandates and initiatives for renewable sources of energy.

  3. ; Evolution of genes and genomes on the Drosophila phylogeny

    E-Print Network [OSTI]

    Kellis, Manolis

    ARTICLES ; Evolution of genes and genomes on the Drosophila phylogeny Drosophila 12 Genomes Consortium* Comparative analysis of multiple genomes in a phylogenetic framework dramatically improves the precision and sensitivity of evolutionary inference, producing more robust results than single-genome

  4. VISUAL ANALYTICS FOR CLIMATE ANDTEXT ANALYSIS

    E-Print Network [OSTI]

    Wang, Xiaorui "Ray"

    . Wednesday, April 11, 12 #12;CLIMATE DATA DELUGE Wednesday, April 11, 12 #12;CLIMATE DATA DELUGE Wednesday, April 11, 12 #12;CLIMATE DATA DELUGE Wednesday, April 11, 12 #12;CLIMATE DATA DELUGE Wednesday, April 11, 12 #12;CLIMATE DATA DELUGE Wednesday, April 11, 12 #12;CLIMATE DATA DELUGE Wednesday, April 11, 12

  5. BC Agriculture Climate Change Adaptation

    E-Print Network [OSTI]

    Pedersen, Tom

    BC Agriculture Climate Change Adaptation Risk + Opportunity Assessment Provincial Report executive summary #12;published March 2012 by the British Columbia Agriculture & Food Climate Action Initiative www.BCAgClimateAction.ca project funding provided by Agriculture and Agri-food Canada BC Ministry of Agriculture BC Ministry

  6. BC Agriculture Climate Change Adaptation

    E-Print Network [OSTI]

    Pedersen, Tom

    BC Agriculture Climate Change Adaptation Risk + Opportunity Assessment Provincial Report #12;published March 2012 by the British Columbia Agriculture & Food Climate Action Initiative www.BCAgClimateAction.ca project funding provided by Agriculture and Agri-food Canada BC Ministry of Agriculture BC Ministry

  7. Climate Change Major information sources

    E-Print Network [OSTI]

    ://www.ipcc.ch/ Vital Climate Graphics, at http://www.grida.no/climate/vital/ Climate Change Impacts on US, at http://www.gcrio.org/NationalAssessment/ Greenhouse Warming Prediction #12;Energy Predictions 2 Sources: Energy Information Administration (EIA); International Energy Agency (IEA) 2% growth per year, or doubling in 35 years (shortcut: 70/%=doubling) Fossil

  8. Climate Change Action Plan Report

    E-Print Network [OSTI]

    Hansen, Andrew J.

    Climate Change Action Plan Report Intermountain Region 2013 National Park Service Resource Stewardship and Science Landscape Conservation and Climate Change Division #12;About this Report Each National Park Service is responding to the challenge of climate change; and (2) raise awareness among NPS

  9. 4, 28752899, 2007 Climate change

    E-Print Network [OSTI]

    Paris-Sud XI, Université de

    HESSD 4, 2875­2899, 2007 Climate change impact and model inaccuracy P. Droogers et al. Title Page are under open-access review for the journal Hydrology and Earth System Sciences Climate change impact­2899, 2007 Climate change impact and model inaccuracy P. Droogers et al. Title Page Abstract Introduction

  10. CLIMATE CHANGE IMPACTS, VULNERABILITIES, AND

    E-Print Network [OSTI]

    CLIMATE CHANGE IMPACTS, VULNERABILITIES, AND ADAPTATION IN THE SAN FRANCISCO BAY AREA Commission's California Climate Change Center JULY 2012 CEC5002012071 Prepared for: California Energy, as well as projections of future changes in climate based on modeling studies using various plausible

  11. Climate Change Proposed Scoping Plan

    E-Print Network [OSTI]

    Climate Change Proposed Scoping Plan a amework for change Prepared by the California Air Resources #12;CLIMATE CHANGE SCOPING PLAN State of California Air Resources Board Resolution 08-47 December 11 greenhouse gas (GHG) emissions that cause global warming; WHEREAS, the adverse impacts of climate change

  12. Edison Electric Institute Update

    Broader source: Energy.gov [DOE]

    Presentation—given at the Fall 2011 Federal Utility Partnership Working Group (FUPWG) meeting—discusses the Edison Electric Institute (EEI) and the current electricity landscape.

  13. UNCLASSIFIED Institute for Materials ...

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Institute for Materials Science Lecture Series Dr Roger D Doherty M.A. D. Phil., Fellow TMS Emeritus Professor of Materials Science and Engineering, Drexel University,...

  14. INSTITUTE OF COMPUTER SCIENCE

    E-Print Network [OSTI]

    Institute of Computer Science, Academy of Sciences of the Czech Republic. Pod vodÆrenskou v 2, 182 07 Prague 8, Czech Republic. phone: (+420)266052083 ...

  15. IACM Institute Overview

    Energy Savers [EERE]

    Institute Overview Craig Blue, Oak Ridge National Laboratory 2015 AMO Peer Review - May 28, 2015 This presentation does not contain any proprietary, confidential, or otherwise...

  16. The Genome of the Epsilonproteobacterial Chemolithoautotroph Sulfurimonas dentrificans

    E-Print Network [OSTI]

    Sievert, Stefan M.; USF Genomics Class

    2008-01-01T23:59:59.000Z

    10 , Jörg Simon 11 , and the USF Genomics Class 2, ? Biologyof coverage at the Production Genomics Facility of the Joint

  17. CLIMATE POLICY The Planet's

    E-Print Network [OSTI]

    Falge, Eva

    CLIMATE POLICY The Planet's Laundromat The Planet's Laundromat ANTHROPOLOGY Rukina's Remarkable Planck Society's Science Express last fall as it began its trip through India. India's Prime Minister Man). As a mem- ber of the German delegation, the visit afford- ed me the opportunity to learn more about India

  18. ENERGY, CLIMATE AND SUSTAINABLE

    E-Print Network [OSTI]

    ENERGY, CLIMATE AND SUSTAINABLE DEVELOPMENT NAMAs and the Carbon Market Nationally Appropriate Mitigation Actions of developing countries PersPectives series 2009 #12;NAMAs and the Carbon MarketPPrOPriate MitigatiON actiONs: china's experience and Perspective . . . . . . . . . . . 11 Fei

  19. Energy, Climate & Infrastructure Security

    E-Print Network [OSTI]

    Energy, Climate & Infrastructure Security EXCEPTIONAL SERVICE IN THE NATIONAL INTEREST Sandia Security Administration under contract DE-AC04-94AL85000. SAND 2012-1846P CustomTraining Sandia providesPRAsandhowtheycanbemanaged to increase levels of safety and security. Like othertrainings,Sandiaexpertsdesigncoursesto beasbroadorin

  20. COLORADO CLIMATE Basic Climatology

    E-Print Network [OSTI]

    or cold, wetness or dryness, calm or storm, clearness or cloudiness Climate - the statistical collection;The Earth's Energy Balance Incoming energy from the sun (solar radiation) heats the Earth Some by the Earth and re-emitted Incoming solar radiation is shorter wavelengths (higher energy) than what

  1. aerosols and climate : uncertainties

    E-Print Network [OSTI]

    contributes to creating a level playing field. (BC emissions tradeble like CO2 emissions?) OUTLINE #12;size. policy measures, is even more uncertain (emissions & their chemical fingerprint are uncertain (not just aerosol emissions, not just climate impacts) OUTLINE #12;- Standardization doesn't reduce

  2. Global Climate & Catastrophic Risk

    E-Print Network [OSTI]

    de Lijser, Peter

    Global Climate & Catastrophic Risk Forum 2012 A Joint Program with LA RIMS Education Day Rethinking Catastrophic Risk in Risk Management: Earthquake-Related Challenges Featuring: Keynote Speaker Dr. Frank Beuthin, Willis Group Holdings Plc. Yohei Miyamoto, Aon Risk Solutions Curtis deVera, Marsh

  3. Genome Size Varaiation in D. melanogaster

    E-Print Network [OSTI]

    Alfrejd, Benjamin

    2011-04-26T23:59:59.000Z

    in genome size may account for some of the missing heritability. We measured female genome sizes for 34 Drosophila melanogaster inbred strains that derived from isofemale lines established from a natural population in Raleigh, NC, in addition to a group...

  4. Genome Engineering with TAL Effector Nucleases

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Genome Engineering with TAL Effector Nucleases Print Genome engineering (GE), an emerging discipline in which a DNA sequence is altered at a single position, has a wide variety of...

  5. GWIDD: Genome-wide protein docking database

    E-Print Network [OSTI]

    Kundrotas, Petras J.; Zhu, Zhengwei; Vasker, Ilya A.

    2009-11-09T23:59:59.000Z

    Structural information on interacting proteins is important for understanding life processes at the molecular level. Genome-wide docking database is an integrated resource for structural studies of protein–protein interactions on the genome scale...

  6. Population genomics20-02-2009 Antnio Rodrigues; Bruno Santos / 59 Population Genomics

    E-Print Network [OSTI]

    Goldschmidt, Christina

    Population genomics20-02-2009 António Rodrigues; Bruno Santos / 59 Population Genomics 1 António Rodrigues (PDBC 2008) Bruno Santos (PDBC 2008) #12;Population genomics20-02-2009 António Rodrigues; Bruno Santos / 59 Contents 2 2 1000 genome project 1 Motivation and Introduction New generation sequencing

  7. Genome Sequence of the Pea Aphid Acyrthosiphon The International Aphid Genomics Consortium"

    E-Print Network [OSTI]

    Paris-Sud XI, Université de

    Genome Sequence of the Pea Aphid Acyrthosiphon pisum The International Aphid Genomics Consortium we present the 464 Mb draft genome assembly of the pea aphid Acyrthosiphon pisum. This first published whole genome sequence of a basal hemimetabolous insect provides an outgroup to the multiple

  8. Comparative Sequencing of Plant Genomes: Choices to Make The first sequenced genome of a plant,

    E-Print Network [OSTI]

    Purugganan, Michael D.

    COMMENTARY Comparative Sequencing of Plant Genomes: Choices to Make The first sequenced genome of a plant, Arabidopsis thaliana, was published ,6 years ago (Arabidopsis Genome Initiative, 2000). Since that time, the complete rice genome (Oryza sativa; Goff et al., 2002; Yu et al., 2002; International Rice

  9. Climate change and energy security: an analysis of policy research

    SciTech Connect (OSTI)

    King, Marcus Dubois [George Washington University] [George Washington University; Gulledge, Jay [ORNL] [ORNL

    2013-01-01T23:59:59.000Z

    The literature on climate change's impacts on energy security is scattered across disparate fields of research and schools of thought. Much of this literature has been produced outside of the academy by scholars and practitioners working in "think tanks," government agencies, and international/multilateral institutions. Here we reviewed a selected set of 58 articles and reports primarily from such sources and performed textual analysis of the arguments. Our review of this literature identifies three potential mechanisms for linking climate change and energy security: Climate change may 1) create second-order effects that may exacerbate social instability and disrupt energy systems; 2) directly impact energy supply and/or systems or 3) influence energy security through the effects of climate-related policies. We identify emerging risks to energy security driven by climate mitigation tech-nology choices but find less evidence of climate change's direct physical impacts. We used both empirical and qualitative selection factors for choosing the grey literature sample. The sources we selected were published in the last 5 years, available through electronic media and were written in language accessible to general policy or academic readers. The organi-zations that published the literature had performed previous research in the general fields of energy and/or climate change with some analytical content and identified themselves as non-partisan. This literature is particularly valuable to scholars because identifies understudied relationships that can be rigorously assessed through academic tools and methodologies and informs a translational research agenda that will allow scholars to engage with practitioners to address challenges that lie at the nexus of climate change and energy security.

  10. From genomics to chemical genomics: new developments in KEGG

    E-Print Network [OSTI]

    Minoru Kanehisa; Susumu Goto; Masahiro Hattori; Kiyoko F. Aoki-kinoshita; Masumi Itoh; Shuichi Kawashima; Toshiaki Katayama; Michihiro Araki; Mika Hirakawa

    2006-01-01T23:59:59.000Z

    The increasing amount of genomic and molecular information is the basis for understanding higherorder biological systems, such as the cell and the 15 organism, and their interactions with the environment, as well as for medical, industrial and other practical applications. The KEGG resource

  11. Genome Biology 2004, 6:302 commentreviewsreportsdepositedresearchinteractionsinformationrefereedresearch

    E-Print Network [OSTI]

    Gent, Universiteit

    Genome Biology 2004, 6, Technologiepark 927, B-9052 Ghent, Belgium. E-mail: Yves.vandepeer@psb.ugent.be Published: 21 December 2004 Genome at http://genomebiology.com/2004/6/1/302 © 2004 BioMed Central Ltd A report on the Plant Genomics European

  12. The Human Genome Project: Sequencing the Future

    E-Print Network [OSTI]

    genome programs--Genomes to Life, the Microbial Genome Program, and the Microbial Cell Project on fossil fuels. The new findings also have the potential to provide tools for enhanced biothreat agent detection and response and for using genetically engineered microbes to clean up toxic wastes in contaminat

  13. INVITED: Comparative Microbial Genomics Giri Narasimhan

    E-Print Network [OSTI]

    Narasimhan, Giri

    INVITED: Comparative Microbial Genomics Giri Narasimhan Bioinformatics Research Group (Bio, comparative genomics holds the keys to decipher and mine this wealth of information. We discuss the diverse ways in which the availability of comparative genomics data allows us to answer more questions

  14. UNL Core for Applied Genomics and Ecology

    E-Print Network [OSTI]

    Farritor, Shane

    UNL Core for Applied Genomics and Ecology Bioinformatics training Roche 454 GS-FLX Registration, Microbiomes, Variant Analysis, Whole Genomes, Transcriptomes Data Analysis and Statistics CAGE database and employer. University of Nebraska-Lincoln*Core for Applied Genomics and Ecology* 323 Filley Hall *Lincoln

  15. One day seminar: Genetics and Genomics of

    E-Print Network [OSTI]

    Brierley, Andrew

    SCHOOL OF MEDICINE One day seminar: Genetics and Genomics of Infectious Diseases Malaria and TB 14th June 2013 University of St Andrews - School of Medicine Pathogen genome research allows exquisite to understanding disease progression. Pathogen genome sequencing is accessible to most. Outputs have broad

  16. Bridging mycorrhizal genomics, metagenomics and forest ecology

    E-Print Network [OSTI]

    Pringle, Anne

    Meetings Bridging mycorrhizal genomics, metagenomics and forest ecology 6th New Phytologist of easily cultured saprotrophic fungi (among the first three published genomes were the models Saccharomyces or biotechnological interest, genomics is now poised to rapidly permeate the fields of fungal ecology and evolution

  17. Prospects & Overviews Evolution of eukaryotic genome

    E-Print Network [OSTI]

    Babu, M. Madan

    , O. dioica has a rapidly evolving, highly compact genome with a divergent intron-exon organization. Additionally, O. dioica lacks the minor spli- ceosome and key DNA repair pathway genes. Even with a compact on various aspects of the global genome architecture and different genomic fea- tures such as intron

  18. Genome Biology 2005, 6:312 commentreviewsreportsdepositedresearchinteractionsinformationrefereedresearch

    E-Print Network [OSTI]

    Kellis, Manolis

    Genome Biology 2005, 6:312 commentreviewsreportsdepositedresearchinteractionsinformationrefereedresearch Meeting report Large-scale discovery and validation of functional elements in the human genome-mail: bbernst@fas.harvard.edu. Manolis Kellis. E-mail: manoli@mit.edu Published: 1 March 2005 Genome Biology

  19. Genome Biology 2006, 7:320 commentreviewsreportsdepositedresearchinteractionsinformationrefereedresearch

    E-Print Network [OSTI]

    Pritham, Ellen J.

    Genome Biology 2006, 7:320 commentreviewsreportsdepositedresearchinteractionsinformationrefereedresearch Meeting report Mobile DNA: genomes under the influence Cédric Feschotte and Ellen J Pritham Feschotte. Email: cedric@uta.edu Published: 30 June 2006 Genome Biology 2006, 7:320 (doi:10.1186/gb-2006

  20. DATA QUALITY IN GENOME DATABASES (Research Paper)

    E-Print Network [OSTI]

    Weske, Mathias

    DATA QUALITY IN GENOME DATABASES (Research Paper) Heiko Müller Humboldt University Berlin, Germany@dbis.informatik.hu-berlin.de Abstract: Genome databases store data about molecular biological entities such as genes, proteins, diseases is their importance in the process of drug discovery. Genome data is analyzed and interpreted to gain so-called leads