Powered by Deep Web Technologies
Note: This page contains sample records for the topic "bssd genomic science" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


1

Biological Systems Science Division (BSSD) | U.S. DOE Office of Science  

Office of Science (SC) Website

Biological and Environmental Research (BER) BER Home About Research Research Abstracts Searchable Archive of BER Highlights External link Biological Systems Science Division (BSSD) Genomic Science DOE Bioenergy Research Centers Radiochemistry & Imaging Instrumentation Radiobiology: Low Dose Radiation Research DOE Human Subjects Protection Program Structural Biology DOE Joint Genome Institute Climate and Environmental Sciences Division (CESD) Facilities Science Highlights Benefits of BER Funding Opportunities Biological & Environmental Research Advisory Committee (BERAC) News & Resources Contact Information Biological and Environmental Research U.S. Department of Energy SC-23/Germantown Building 1000 Independence Ave., SW Washington, DC 20585 P: (301) 903-3251 F: (301)

2

Genomic Science | U.S. DOE Office of Science (SC)  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Biological Biological Systems Science Division (BSSD) » Genomic Science Biological and Environmental Research (BER) BER Home About Research Research Abstracts Searchable Archive of BER Highlights External link Biological Systems Science Division (BSSD) Genomic Science DOE Bioenergy Research Centers Radiochemistry & Imaging Instrumentation Radiobiology: Low Dose Radiation Research DOE Human Subjects Protection Program Structural Biology DOE Joint Genome Institute Climate and Environmental Sciences Division (CESD) Facilities Science Highlights Benefits of BER Funding Opportunities Biological & Environmental Research Advisory Committee (BERAC) News & Resources Contact Information Biological and Environmental Research U.S. Department of Energy SC-23/Germantown Building

3

DOE Joint Genome Institute | U.S. DOE Office of Science (SC)  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

DOE Joint Genome Institute DOE Joint Genome Institute Biological and Environmental Research (BER) BER Home About Research Research Abstracts Searchable Archive of BER Highlights External link Biological Systems Science Division (BSSD) Genomic Science DOE Bioenergy Research Centers Radiochemistry & Imaging Instrumentation Radiobiology: Low Dose Radiation Research DOE Human Subjects Protection Program Structural Biology DOE Joint Genome Institute Climate and Environmental Sciences Division (CESD) Facilities Science Highlights Benefits of BER Funding Opportunities Biological & Environmental Research Advisory Committee (BERAC) News & Resources Contact Information Biological and Environmental Research U.S. Department of Energy SC-23/Germantown Building 1000 Independence Ave., SW Washington, DC 20585 P: (301) 903-3251 F: (301)

4

Genome Science/Technologies  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Science & Innovation » Science & Innovation » Science & Engineering Capabilities » Bioscience: Bioenergy, Biosecurity, and Health » Environmental Microbiology » Genome Genome Science/Technologies Los Alamos using cutting-edge sequencing, finishing, and analysis, impact valuable genomic data. Get Expertise Cheryl Kuske DOE BER Biological System Science Division Program Manager Email Srinivas Iyer Bioscience Group Leader Email Momchilo Vuyisich Bioenergy and Biomedical Sciences Email Rebecca McDonald Bioscience Communications Email State-of-the art technology and extensive genomics expertise Protein research Read caption + Los Alamos National Laboratory graduate student, Patricia Langan, changes the properties of a green fluorescent protein in order to create new fluorescent protein variants.

5

Structural Biology | U.S. DOE Office of Science (SC)  

Office of Science (SC) Website

Structural Biology Structural Biology Biological and Environmental Research (BER) BER Home About Research Research Abstracts Searchable Archive of BER Highlights External link Biological Systems Science Division (BSSD) Genomic Science DOE Bioenergy Research Centers Radiochemistry & Imaging Instrumentation Radiobiology: Low Dose Radiation Research DOE Human Subjects Protection Program Structural Biology DOE Joint Genome Institute Climate and Environmental Sciences Division (CESD) Facilities Science Highlights Benefits of BER Funding Opportunities Biological & Environmental Research Advisory Committee (BERAC) News & Resources Contact Information Biological and Environmental Research U.S. Department of Energy SC-23/Germantown Building 1000 Independence Ave., SW Washington, DC 20585 P: (301) 903-3251 F: (301)

6

Genomic Sciences | Clean Energy | ORNL  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

the fundamental principles that control complex biological systems important to clean energy and environmental applications. Multidisciplinary genomic science research and...

7

Radiochemistry & Imaging Instrumentation | U.S. DOE Office of Science (SC)  

Office of Science (SC) Website

Radiochemistry & Imaging Instrumentation Radiochemistry & Imaging Instrumentation Biological and Environmental Research (BER) BER Home About Research Research Abstracts Searchable Archive of BER Highlights External link Biological Systems Science Division (BSSD) Genomic Science DOE Bioenergy Research Centers Radiochemistry & Imaging Instrumentation Radiobiology: Low Dose Radiation Research DOE Human Subjects Protection Program Structural Biology DOE Joint Genome Institute Climate and Environmental Sciences Division (CESD) Facilities Science Highlights Benefits of BER Funding Opportunities Biological & Environmental Research Advisory Committee (BERAC) News & Resources Contact Information Biological and Environmental Research U.S. Department of Energy SC-23/Germantown Building 1000 Independence Ave., SW Washington, DC 20585 P: (301) 903-3251 F: (301)

8

Low Dose Radiation | U.S. DOE Office of Science (SC)  

Office of Science (SC) Website

Radiobiology: Low Dose Radiation Radiobiology: Low Dose Radiation Research Biological and Environmental Research (BER) BER Home About Research Research Abstracts Searchable Archive of BER Highlights External link Biological Systems Science Division (BSSD) Genomic Science DOE Bioenergy Research Centers Radiochemistry & Imaging Instrumentation Radiobiology: Low Dose Radiation Research DOE Human Subjects Protection Program Structural Biology DOE Joint Genome Institute Climate and Environmental Sciences Division (CESD) Facilities Science Highlights Benefits of BER Funding Opportunities Biological & Environmental Research Advisory Committee (BERAC) News & Resources Contact Information Biological and Environmental Research U.S. Department of Energy SC-23/Germantown Building 1000 Independence Ave., SW Washington, DC 20585 P: (301) 903-3251 F: (301)

9

SCIENCE, POLITICS. AND THE HUMAN GENOM  

E-Print Network [OSTI]

/ Robert Cook-Deegan. p. cm. Includes bibliographical references. 1. Human Genome Project. 2. Human geneSCIENCE, POLITICS. AND THE HUMAN GENOM A scrupulous . . . narrative of the genesis and opening- DEEGAN #12;#12;#12;#12;The GENE WARS Science, Politics, and theHuman Genome ROBERT COOK-DEEGAN W - W

Richardson, David

10

Center for Cell and Genome Sciences, Crocker Science Building  

E-Print Network [OSTI]

chemistry Center for Cell and Genome Sciences genetic engineering building artificial life brain engineering nanotechnology light generating molecules light-activated ion channels breaking the light barrier laser tweezers photodiodes #12;the Cell engineering the genome, imaging proteins Invitrogen at the intersection of chemistry

Tipple, Brett

11

Genome Science and Personalized Cancer Treatment  

ScienceCinema (OSTI)

August 4, 2009 Berkeley Lab lecture: Results from the Human Genome Project are enabling scientists to understand how individual cancers form and progress. This information, when combined with newly developed drugs, can optimize the treatment of individual cancers. Joe Gray, director of Berkeley Labs Life Sciences Division and Associate Laboratory Director for Life and Environmental Sciences, will focus on this approach, its promise, and its current roadblocks ? particularly with regard to breast cancer.

Joe Gray

2010-01-08T23:59:59.000Z

12

Genome Science and Personalized Cancer Treatment  

SciTech Connect (OSTI)

August 4, 2009 Berkeley Lab lecture: Results from the Human Genome Project are enabling scientists to understand how individual cancers form and progress. This information, when combined with newly developed drugs, can optimize the treatment of individual cancers. Joe Gray, director of Berkeley Labs Life Sciences Division and Associate Laboratory Director for Life and Environmental Sciences, will focus on this approach, its promise, and its current roadblocks particularly with regard to breast cancer.

Joe Gray

2009-08-07T23:59:59.000Z

13

Genome Science and Personalized Cancer Treatment  

SciTech Connect (OSTI)

Summer Lecture Series 2009: Results from the Human Genome Project are enabling scientists to understand how individual cancers form and progress. This information, when combined with newly developed drugs, can optimize the treatment of individual cancers. Joe Gray, director of Berkeley Labs Life Sciences Division and Associate Laboratory Director for Life and Environmental Sciences, will focus on this approach, its promise, and its current roadblocks particularly with regard to breast cancer.

Gray, Joe

2009-08-04T23:59:59.000Z

14

Public Health Genomics Population Health Sciences 650 Section 023  

E-Print Network [OSTI]

Public Health Genomics Population Health Sciences 650 Section 023 Summer 2009, 07/20/09 ­ 07: Public health genomics is a new discipline that uses knowledge gained from genetic and molecular research and the social sciences, and much more. This course will provide 1) an introduction to public health genomics, 2

Sheridan, Jennifer

15

Bacterial phytopathogens and genome science Joa~ o C Setubal1  

E-Print Network [OSTI]

Bacterial phytopathogens and genome science Joa~ o C Setubal1 , Leandro M Moreira2 and Ana CR da Silva3 There are now fourteen completed genomes of bacterial phytopathogens, all of which have been generated in the past six years. These genomes come from a phylogenetically diverse set of organisms

Setubal, João Carlos

16

684 journal of law, medicine & ethics he new science of genomics endeavors to  

E-Print Network [OSTI]

684 journal of law, medicine & ethics T he new science of genomics endeavors to chart the genomes and develop- ing countries, the promises and perils of genomic science appear against a backdrop of global attempting to decide about participating in genomic research or any other biomedical research. Genomic

Church, George M.

17

The Plant Genome [A Supplement to Crop Science] March 2008 No. 1 S-27 Genomic Origins of Potato  

E-Print Network [OSTI]

The Plant Genome [A Supplement to Crop Science] March 2008 No. 1 S-27 Genomic Origins of Potato., and Shelley H. Jansky Abstract Chromosome pairing relationships within cultivated potato (Solanum tuberosum we reexamine potato genome hypotheses with the first phylogenetic analysis of all major genomes

Spooner, David

18

Genome Science and Personalized Cancer Treatment (LBNL Summer Lecture Series)  

SciTech Connect (OSTI)

Summer Lecture Series 2009: Results from the Human Genome Project are enabling scientists to understand how individual cancers form and progress. This information, when combined with newly developed drugs, can optimize the treatment of individual cancers. Joe Gray, director of Berkeley Labs Life Sciences Division and Associate Laboratory Director for Life and Environmental Sciences, will focus on this approach, its promise, and its current roadblocks particularly with regard to breast cancer.

Gray, Joe

2009-08-04T23:59:59.000Z

19

Proceedings of the Sudden Oak Death Third Science Symposium Mitochondrial Genomics in the Genus  

E-Print Network [OSTI]

Proceedings of the Sudden Oak Death Third Science Symposium 243 Mitochondrial Genomics in the Genus The mitochondrial genomes of Phytophthora infestans, P. ramorum and P. sojae have been sequenced and comparative genomics has provided an opportunity to examine the processes involved with genome evolution in the genus

Standiford, Richard B.

20

Post-Genomics Nanotechnology Is Gaining Momentum: Nanoproteomics and Applications in Life Sciences  

E-Print Network [OSTI]

Post-Genomics Nanotechnology Is Gaining Momentum: Nanoproteomics and Applications in Life Sciences of nanotechnology applications, including nanoporous structures, functionalized nanoparticles, quantum dots

Tan, Weihong

Note: This page contains sample records for the topic "bssd genomic science" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


21

Convergence of Advances in Genomics, Team Science, and Repositories as Drivers of Progress in Psychiatric Genomics  

Science Journals Connector (OSTI)

Abstract After many years of unfilled promise, psychiatric genetics has seen an unprecedented number of successes in recent years. We hypothesize that the field has reached an inflection point through a confluence of four key developments: advances in genomics; the orientation of the scientific community around large collaborative team science projects; the development of sample and data repositories; and a policy framework for sharing and accessing these resources. We discuss these domains and their effect on scientific progress and provide a perspective on why we think this is only the beginning of a new era in scientific discovery.

Thomas Lehner; Geetha Senthil; Anjen M. Addington

2015-01-01T23:59:59.000Z

22

Life Sciences Division and Center for Human Genome Studies 1994  

SciTech Connect (OSTI)

This report summarizes the research and development activities of the Los Alamos National Laboratory`s Life Sciences Division and the biological aspects of the Center for Human Genome Studies for the calendar year 1994. The technical portion of the report is divided into two parts, (1) selected research highlights and (2) research projects and accomplishments. The research highlights provide a more detailed description of a select set of projects. A technical description of all projects is presented in sufficient detail so that the informed reader will be able to assess the scope and significance of each project. Summaries useful to the casual reader desiring general information have been prepared by the group leaders and appear in each group overview. Investigators on the staff of the Life Sciences Division will be pleased to provide further information.

Cram, L.S.; Stafford, C. [comp.

1995-09-01T23:59:59.000Z

23

Data Management | U.S. DOE Office of Science (SC)  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Data Management Data Management Biological and Environmental Research (BER) BER Home About Research Research Abstracts Searchable Archive of BER Highlights External link Biological Systems Science Division (BSSD) Climate and Environmental Sciences Division (CESD) ARM Climate Research Facility Atmospheric System Research (ASR) Program Data Management Earth System Modeling (ESM) Program William R. Wiley Environmental Molecular Sciences Laboratory (EMSL) Integrated Assessment of Global Climate Change Regional & Global Climate Modeling (RGCM) Program Subsurface Biogeochemical Research Terrestrial Carbon Sequestration External link Terrestrial Ecosystem Science Facilities Science Highlights Benefits of BER Funding Opportunities Biological & Environmental Research Advisory Committee (BERAC)

24

Dr J Michael Kuperberg | U.S. DOE Office of Science (SC)  

Office of Science (SC) Website

Climate and Climate and Environmental Sciences Division (CESD) » Dr J Michael Kuperberg Biological and Environmental Research (BER) BER Home About Research Research Abstracts Searchable Archive of BER Highlights External link Biological Systems Science Division (BSSD) Climate and Environmental Sciences Division (CESD) ARM Climate Research Facility Atmospheric System Research (ASR) Program Data Management Earth System Modeling (ESM) Program William R. Wiley Environmental Molecular Sciences Laboratory (EMSL) Integrated Assessment of Global Climate Change Regional & Global Climate Modeling (RGCM) Program Subsurface Biogeochemical Research Terrestrial Carbon Sequestration External link Terrestrial Ecosystem Science Facilities Science Highlights Benefits of BER Funding Opportunities

25

ARM Climate Research Facility | U.S. DOE Office of Science (SC)  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Research » Climate and Research » Climate and Environmental Sciences Division (CESD) » ARM Climate Research Facility Biological and Environmental Research (BER) BER Home About Research Research Abstracts Searchable Archive of BER Highlights External link Biological Systems Science Division (BSSD) Climate and Environmental Sciences Division (CESD) ARM Climate Research Facility Atmospheric System Research (ASR) Program Data Management Earth System Modeling (ESM) Program William R. Wiley Environmental Molecular Sciences Laboratory (EMSL) Integrated Assessment of Global Climate Change Regional & Global Climate Modeling (RGCM) Program Subsurface Biogeochemical Research Terrestrial Carbon Sequestration External link Terrestrial Ecosystem Science Facilities Science Highlights Benefits of BER

26

William R. Wiley Environmental Molecular Sciences Laboratory (EMSL) | U.S.  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

William R. Wiley Environmental William R. Wiley Environmental Molecular Sciences Laboratory (EMSL) Biological and Environmental Research (BER) BER Home About Research Research Abstracts Searchable Archive of BER Highlights External link Biological Systems Science Division (BSSD) Climate and Environmental Sciences Division (CESD) ARM Climate Research Facility Atmospheric System Research (ASR) Program Data Management Earth System Modeling (ESM) Program William R. Wiley Environmental Molecular Sciences Laboratory (EMSL) Integrated Assessment of Global Climate Change Regional & Global Climate Modeling (RGCM) Program Subsurface Biogeochemical Research Terrestrial Carbon Sequestration External link Terrestrial Ecosystem Science Facilities Science Highlights Benefits of BER Funding Opportunities Biological & Environmental Research Advisory Committee (BERAC)

27

Atmospheric System Research (ASR) Program | U.S. DOE Office of Science (SC)  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

» Atmospheric System Research (ASR) » Atmospheric System Research (ASR) Program Biological and Environmental Research (BER) BER Home About Research Research Abstracts Searchable Archive of BER Highlights External link Biological Systems Science Division (BSSD) Climate and Environmental Sciences Division (CESD) ARM Climate Research Facility Atmospheric System Research (ASR) Program Data Management Earth System Modeling (ESM) Program William R. Wiley Environmental Molecular Sciences Laboratory (EMSL) Integrated Assessment of Global Climate Change Regional & Global Climate Modeling (RGCM) Program Subsurface Biogeochemical Research Terrestrial Carbon Sequestration External link Terrestrial Ecosystem Science Facilities Science Highlights Benefits of BER Funding Opportunities Biological & Environmental Research Advisory Committee (BERAC)

28

Integrated Assessment of Global Climate Change | U.S. DOE Office of Science  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Integrated Assessment of Global Integrated Assessment of Global Climate Change Biological and Environmental Research (BER) BER Home About Research Research Abstracts Searchable Archive of BER Highlights External link Biological Systems Science Division (BSSD) Climate and Environmental Sciences Division (CESD) ARM Climate Research Facility Atmospheric System Research (ASR) Program Data Management Earth System Modeling (ESM) Program William R. Wiley Environmental Molecular Sciences Laboratory (EMSL) Integrated Assessment of Global Climate Change Regional & Global Climate Modeling (RGCM) Program Subsurface Biogeochemical Research Terrestrial Carbon Sequestration External link Terrestrial Ecosystem Science Facilities Science Highlights Benefits of BER Funding Opportunities Biological & Environmental Research Advisory Committee (BERAC)

29

Earth System Modeling (ESM) Program | U.S. DOE Office of Science (SC)  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Earth System Modeling (ESM) Earth System Modeling (ESM) Program Biological and Environmental Research (BER) BER Home About Research Research Abstracts Searchable Archive of BER Highlights External link Biological Systems Science Division (BSSD) Climate and Environmental Sciences Division (CESD) ARM Climate Research Facility Atmospheric System Research (ASR) Program Data Management Earth System Modeling (ESM) Program William R. Wiley Environmental Molecular Sciences Laboratory (EMSL) Integrated Assessment of Global Climate Change Regional & Global Climate Modeling (RGCM) Program Subsurface Biogeochemical Research Terrestrial Carbon Sequestration External link Terrestrial Ecosystem Science Facilities Science Highlights Benefits of BER Funding Opportunities Biological & Environmental Research Advisory Committee (BERAC)

30

Subsurface Biogeochemical Research | U.S. DOE Office of Science (SC)  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Subsurface Biogeochemical Subsurface Biogeochemical Research Biological and Environmental Research (BER) BER Home About Research Research Abstracts Searchable Archive of BER Highlights External link Biological Systems Science Division (BSSD) Climate and Environmental Sciences Division (CESD) ARM Climate Research Facility Atmospheric System Research (ASR) Program Data Management Earth System Modeling (ESM) Program William R. Wiley Environmental Molecular Sciences Laboratory (EMSL) Integrated Assessment of Global Climate Change Regional & Global Climate Modeling (RGCM) Program Subsurface Biogeochemical Research Terrestrial Carbon Sequestration External link Terrestrial Ecosystem Science Facilities Science Highlights Benefits of BER Funding Opportunities Biological & Environmental Research Advisory Committee (BERAC)

31

www.sciencemag.org SCIENCE VOL 296 12 APRIL 2002 261 A Human Genome  

E-Print Network [OSTI]

various laboratories by the Human Genome Diversity Project (HGDP) (3) and CEPH to provide unlimited.sciencemag.org SCIENCE VOL 296 12 APRIL 2002 261 A Human Genome Diversity Cell Line Panel A RESOURCE OF 1064 CULTURED supplies of DNA for studies of sequence diversity and history of modern human populations. Information

Kidd, Kenneth

32

Science Highlights | U.S. DOE Office of Science (SC)  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Science Highlights Science Highlights Biological and Environmental Research (BER) BER Home About Research Facilities Science Highlights Searchable Archive of BER Highlights External link Benefits of BER Funding Opportunities Biological & Environmental Research Advisory Committee (BERAC) News & Resources Contact Information Biological and Environmental Research U.S. Department of Energy SC-23/Germantown Building 1000 Independence Ave., SW Washington, DC 20585 P: (301) 903-3251 F: (301) 903-5051 E: sc.ber@science.doe.gov More Information » Science Highlights Print Text Size: A A A Subscribe FeedbackShare Page Filter within BER Or press Esc Key to close. close Select all that apply. Bioenergy Research Centers (BRCs) Biological Systems Science Division (BSSD) Climate and Environmental Sciences Division (CESD)

33

Progress Report for Structural Genomics Science Theme, year 1  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

University), Gaetano T. Montelione (Rutgers University) The Northeast Structural Genomics Consortium (NESGC, www.nesg.org) used EMSL's High Field NMR facility in 2006-2007 to...

34

Structural Genomics  

Science Journals Connector (OSTI)

Structural Genomics ... Structural genomics is the field of science focused on the systematic determination of the three-dimensional structure of the proteins encoded into genomes. ... Structural genomics is spreading the philosophy of high throughput in all fields of science and making available new tools to speed up research procedures. ...

Ivano Bertini

2003-03-01T23:59:59.000Z

35

Los Alamos Science: The Human Genome Project. Number 20, 1992  

DOE R&D Accomplishments [OSTI]

This document provides a broad overview of the Human Genome Project, with particular emphasis on work being done at Los Alamos. It tries to emphasize the scientific aspects of the project, compared to the more speculative information presented in the popular press. There is a brief introduction to modern genetics, including a review of classic work. There is a broad overview of the Genome Project, describing what the project is, what are some of its major five-year goals, what are major technological challenges ahead of the project, and what can the field of biology, as well as society expect to see as benefits from this project. Specific results on the efforts directed at mapping chromosomes 16 and 5 are discussed. A brief introduction to DNA libraries is presented, bearing in mind that Los Alamos has housed such libraries for many years prior to the Genome Project. Information on efforts to do applied computational work related to the project are discussed, as well as experimental efforts to do rapid DNA sequencing by means of single-molecule detection using applied spectroscopic methods. The article introduces the Los Alamos staff which are working on the Genome Project, and concludes with brief discussions on ethical, legal, and social implications of this work; a brief glimpse of genetics as it may be practiced in the next century; and a glossary of relevant terms.

Cooper, N. G.; Shea, N. [eds.

1992-00-00T23:59:59.000Z

36

Entrepreneurial experiments in science policy: Analyzing the Human Genome Project  

E-Print Network [OSTI]

We re-conceptualize the role of science policy makers, envisioning and illustrating their move from being simple investors in scientific projects to entrepreneurs who create the conditions for entrepreneurial experiments ...

Huang, Kenneth G.

37

DOE Joint Genome Institute: Tringe on Popular Science's "Brilliant 10"  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

6, 2011 6, 2011 Tringe on Popular Science's "Brilliant 10" List WALNUT CREEK, Calif.-Susannah Green Tringe of the DOE Joint Genome Institute (DOE JGI) has been named one of 2011's "Brilliant 10," the annual list compiled by Popular Science magazine of top young researchers. In adding her name to the list, which appears in the October issue, the magazine recognized her $2.5 million grant from the DOE Early Career Research Program to study the role of microbial communities in restored wetlands in the San Francisco Bay-Delta region of California and their impact on long-term carbon sequestration. Bigelow's Dashiell Masland working Photo: Tringe wading into the Brilliant 10 list The Popular Science Brilliant 10 recognizes scientists and researchers

38

Current Genomics, 2002, 3, 000-000 1 1389-2029/02 $35.00+.00 2002 Bentham Science Publishers Ltd.  

E-Print Network [OSTI]

Current Genomics, 2002, 3, 000-000 1 1389-2029/02 $35.00+.00 © 2002 Bentham Science Publishers Ltd. Non-Mendelian Phenomena in Allopolyploid Genome Evolution Bao Liu1 and Jonathan F. Wendel2,* 1. Recent evidence indicates that this genome doubling may be accompanied by a variety of non- Mendelian

Wendel, Jonathan F.

39

Current Genomics, 2004, 5, 299-308 1 1389-2029/04 $45.00+.00 2004 Bentham Science Publishers Ltd.  

E-Print Network [OSTI]

Current Genomics, 2004, 5, 299-308 1 1389-2029/04 $45.00+.00 ©2004 Bentham Science Publishers Ltd. Not Just a Fishing Trip ­ Environmental Genomics Using Zebrafish Louise E. Coverdale, David Lean and C. Cristofre Martin* Center for Advanced Research in Environmental Genomics, Department of Biology, University

Martin, Cristofre

40

Standards in Genomic Science: An Open-Access Journal of the Genomic Standards Consortium (GSC8 Meeting)  

ScienceCinema (OSTI)

George Garrity of Michigan State University talks about the GSC's open-access journal SIGS at the Genomic Standards Consortium's 8th meeting at the DOE JGI in Walnut Creek, Calif. on Sept. 9, 2009.

Garrity, George

2011-06-03T23:59:59.000Z

Note: This page contains sample records for the topic "bssd genomic science" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


41

2006, UCSC Center for Biomolecular Science & Engineering--Page 1 of 4 UCSC GENOME RESEARCH PRIMER  

E-Print Network [OSTI]

All of the functions of a human cell are implicitly coded in the human genome. Now that the molecular sequence of the human genome is known, researchers have begun to mine it for clues as to how the body works in health and in disease. Besides being the blueprint for life, the human genome constitutes a record

California at Santa Cruz, University of

42

Genomics and plant cells: application of genomics strategies to Arabidopsis cell biology  

Science Journals Connector (OSTI)

29 June 2002 research-article Genomics and plant cells: application of genomics strategies to Arabidopsis cell biology Michael...the way we conduct plant science. Arabidopsis Genomics Functional Genomics Cell Biology| Genomics and...

2002-01-01T23:59:59.000Z

43

Genome To Life Report | U.S. DOE Office of Science (SC)  

Office of Science (SC) Website

Genome To Life Report Genome To Life Report Biological and Environmental Research Advisory Committee (BERAC) BERAC Home Meetings Members Charges/Reports Current BERAC Charges Archive of BERAC Reports Charter .pdf file (40KB) BER Committees of Visitors BER Home Charges/Reports Genome To Life Report Print Text Size: A A A RSS Feeds FeedbackShare Page DOE Genomes to Life Program Information External link BRINGING THE GENOME TO LIFE - Energy Related Biology in the New Genomic World - A New Research Program for the Department of Energy's Office of Biological and Environmental Research recommended by the Biological and Environmental Research Advisory Committee June 2000 In response to the charge letter of Dr. Martha Krebs, November 24, 1999 OVERVIEW Mission: To develop the capability of understanding and predicting the behavior of

44

Personal Genomics, Personalized Medicine,  

E-Print Network [OSTI]

Personal Genomics, Personalized Medicine, & YOU Carrie Iwema, PhD, MLS 21st May 2012 AAAS/Science Translational Medicine panel discussion; MLA 2012 #12;Timeline: Human Genome Sequence HSLS, U.Pitt 1995 2014 2000 2003 2007 2007 2010 Human Genome Draft Sequence Complete Human Reference Genome Individual Human

Napp, Nils

45

Disclosure of Research Results from Cancer Genomic Studies: State of the Science  

Science Journals Connector (OSTI)

...Organization of Medical Sciences. International...Commission (NBAC) 5 and Office of Human Research...Department of Energy Office of Science. Human Subjects...of Translational Science Awards (CTSA...therapy. 16 16 CDC. Office of Public Health...

Lynn G. Dressler

2009-07-01T23:59:59.000Z

46

FUNCTIONAL GENOMICS Program of Study  

E-Print Network [OSTI]

FUNCTIONAL GENOMICS Program of Study Research Areas Students Applying Correspondence Graduate Genomics. Students receive training in the biological, physical and computational sciences through of primary institutional affiliation. The Functional Genomics program is administered through the Graduate

Thomas, Andrew

47

First Annual U.S. Department of Energy Office of Science Joint Genome Institute User Meeting  

E-Print Network [OSTI]

dc4el@u.washington.edu Samuel Pitluck DOE Joint Genome29 Pitluck, Sam ..14 Plugge,3 Sanjay Israni, 3 Sam Pitluck, 3 Miriam L. Land, 4 Frank W.

Various

2006-01-01T23:59:59.000Z

48

First Annual U.S. Department of Energy Office of Science Joint Genome Institute User Meeting  

E-Print Network [OSTI]

solvents tetrachloroethene (PCE) and trichloroethene (TCE),PCBs. The genome of the PCE-dechlorinating D. ethenogenesin D. ethenogenes grown on PCE or TCE by qPCR showed high

Various

2006-01-01T23:59:59.000Z

49

GIS: a web-based genomics information system for efficiently manipulating and accessing genome physical maps  

E-Print Network [OSTI]

Biological science has entered the genome era. Global genome integrative physical and genetic mapping promises to revolutionize modern genomics research. To facilitate manipulation and applications of the results from genomics research, many...

Chen, Huaming

2012-06-07T23:59:59.000Z

50

Postdoctoral Positions in Computational Human Microbiome Research (The Department of Genome Sciences, University of Washington)  

E-Print Network [OSTI]

Postdoctoral Positions in Computational Human Microbiome Research (The Department of Genome funded projects: 1) Computational modeling of the human microbiome using a combination of in://elbo.gs.washington.edu) at the University of Washington. Borenstein's group focuses on computational systems biology research of the human

Borenstein, Elhanan

51

DOE Joint Genome Institute: A DOE Office of Science User Facility of  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

DOE Joint Genome Institute DOE Joint Genome Institute Latest News R. irregularis December 20, 2013 A gluttonous plant reveals how its cellular power plant devours foreign DNA. Amborella trichopoda, a sprawling shrub that grows on just a single island in the remote South Pacific, is the only plant in its family and genus. It is also one of the oldest flowering plants, having branched off from others about 200 million years ago. more... R. irregularis November 25, 2013 How Scavenging Fungi Became a Plant's Best Friend. Glomeromycota is an ancient lineage of fungi that has a symbiotic relationship with roots that goes back nearly 420 million years to the earliest plants. More than two thirds of the world's plants depend on this soil-dwelling symbiotic fungus to survive, including critical agricultural crops such as wheat,

52

DOE Joint Genome Institute: A DOE Office of Science User Facility of  

Broader source: All U.S. Department of Energy (DOE) Office Webpages

MyJGISubmit ProposalsInternalEmergency InfoCareers MyJGISubmit ProposalsInternalEmergency InfoCareers JGI website People Go Genomes Project List User Programs Sequencing Informatics Systems Education News & Publications Events About Us JGI Home DOE Joint Genome Institute Latest News R. irregularis December 20, 2013 A gluttonous plant reveals how its cellular power plant devours foreign DNA. Amborella trichopoda, a sprawling shrub that grows on just a single island in the remote South Pacific, is the only plant in its family and genus. It is also one of the oldest flowering plants, having branched off from others about 200 million years ago. more... R. irregularis November 25, 2013 How Scavenging Fungi Became a Plant's Best Friend. Glomeromycota is an ancient lineage of fungi that has a symbiotic relationship with roots that

53

ROOM RESERVATION INFO: The Department of Genome Sciences controls reservations for conference rooms on each floor of the Foege Building.  

E-Print Network [OSTI]

address. Requests sent from non-u.washington.edu email accounts can not be processed. #12;April 2011 S040:00-10:00 Genome 361 10:00-11:00 GS-ITS 11:00-12:00 Genome 351 TA Office Hours 12:00-1:30 Genome 361 TA Mtg 3:00-12:00 Genome 351 TA Office Hours 12:00-1:30 Genome 361 TA Mtg 3:00-4:00 D. Skelly 10:30-12:00 Genome 541 1

Kaminsky, Werner

54

Science  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Science newsroomassetsimagesscience-icon.png Science Cutting edge, multidisciplinary national-security science. Health Space Computing Energy Earth Materials Science...

55

Flexibility and Symmetry of Prokaryotic Genome Rearrangement Reveal Lineage-Associated Core-Gene-Defined Genome Organizational Frameworks  

Science Journals Connector (OSTI)

...big.ac.cn . a CAS Key Laboratory of Genome Sciences and Information, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing, Peoples Republic of China b College of Computer Science, Sichuan University, Chengdu, Peoples Republic...

Yu Kang; Chaohao Gu; Lina Yuan; Yue Wang; Yanmin Zhu; Xinna Li; Qibin Luo; Jingfa Xiao; Daquan Jiang; Minping Qian; Aftab Ahmed Khan; Fei Chen; Zhang Zhang; Jun Yu

2014-12-01T23:59:59.000Z

56

Communicating Genomics:GTL  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Annual Annual DOE Joint Genome Institute User Meeting Sponsored By U.S. Department of Energy Office of Science March 29-April 1, 2006 Embassy Suites Hotel and DOE Joint Genome Institute Walnut Creek, California iii Contents Agenda .................................................................................................................. iv Speaker Presentations . .........................................................................................1 Abtracts in order of presentation according to agenda (p. iv) Poster Presentations ..............................................................................................9 Posters alphabetical by first author. *Presenting author. Attendees...............................................................................................................75

57

Methods in comparative genomics: genome correspondence, gene identification and motif discovery  

E-Print Network [OSTI]

1 Methods in comparative genomics: genome correspondence, gene identification and motif discovery@mit.edu, nickp@genome.wi.mit.edu, bwb@genome.wi.mit.edu, bab@mit.edu, lander@wi.mit.edu (1) MIT/Whitehead Institute Center for Genome Research, 320 Charles St., Cambridge MA 02139 (2) MIT Computer Science

Kellis, Manolis

58

Collaborative Science Reveals Genome Secrets Sharing knowledge and bridging disciplines is the story of the University of Washington's  

E-Print Network [OSTI]

was alive with excitement. The Human Genome Project, which had begun a decade before, was about to complete a new department that could best tackle the gold mine of data that the Human Genome Project had the DNA sequence of human hereditary information. It would soon identify the approximately 20,000 genes

Queitsch, Christine

59

Genomics and Systems Biology  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Genomics and Systems Biology Genomics and Systems Biology Genomics and Systems Biology Los Alamos scientists perform research in functional genomics and structural genomics, and applications for such work cover diverse fields such as energy, agriculture, and environmental cleanup. Get Expertise Babetta Marrone Biofuels Program Manager Email Cheryl Kuske DOE BER Biological System Science Division Program Manager Email Chris Detter Emerging Threats Program Manager: Email Rebecca McDonald Bioscience Communications Email "We were asked to build a rocket ship," said developer Joel Berendzen, "but instead we built a 10,000 mph motorcycle." - Sequedex team LANL leads the world in computational finishing of microbial genomes Protein research Read caption + In 2013, Los Alamos scientist Richard Sayre and his team genetically

60

ROOM RESERVATION INFO: The Department of Genome Sciences controls reservations for conference rooms on each floor of the Foege Building.  

E-Print Network [OSTI]

address. Requests sent from non-u.washington.edu email accounts can not be processed. #12;April 2011 S110 Monday Tuesday Wednesday Thursday Friday 1 9:00-10:00 E. Torskey 10:00-11:30 NWGC Mtg 11:30-12:30 E:00-11:30 NWGC Mtg 12:00-1:30 PopGenLunch 11 12 13 14 15 1:00-2:20 Genome 599A 3:30-4:50 Genome 475 9

Kaminsky, Werner

Note: This page contains sample records for the topic "bssd genomic science" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


61

Joint Genome Institute's Automation Approach and History  

SciTech Connect (OSTI)

Department of Energy/Joint Genome Institute (DOE/JGI) collaborates with DOE national laboratories and community users, to advance genome science in support of the DOE missions of clean bio-energy, carbon cycling, and bioremediation.

Roberts, Simon

2006-07-05T23:59:59.000Z

62

Genomic approaches to identify chromosomal regions responding to divergent selection in multiple Sebastes species (subgenus: Sebastosomus)  

E-Print Network [OSTI]

approach incorporating the fields of evolutionary biology, genomics, management, and ocean sciences.

Martinez, Andres Nathaniel

2014-01-01T23:59:59.000Z

63

THE CAMPAIGN FOR UC SANTA CRUZ THE GENOMICS  

E-Print Network [OSTI]

THE CAMPAIGN FOR UC SANTA CRUZ THE GENOMICS INSTITUTE #12;OVERVIEW The UC Santa Cruz Genomics Institute provides the framework for the next great leap in the science of genomics. ensured it would genomic science and speed the benefits of discoveries that improve and save lives. Cancer, autoimmune

California at Santa Cruz, University of

64

Ms. Arti K. Rai, Elvin R. Latty Professor of Law Duke Law School, Duke Institute for Genome Sciences & Policy  

E-Print Network [OSTI]

Institutes of Health/Department of Energy research grant to study collaborative R&D models in genomics-2001 UNIVERSITY OF SAN DIEGO SCHOOL OF LAW Assistant Professor 1996-1997 PROGRAM IN ETHICS AND THE PROFESSIONS Foundations for Policy Development, 61 DUKE LAW JOURNAL 101 (2012)

Richardson, David

65

Microbial GenomicsChallenges and Opportunities: The 9th International Conference on Microbial Genomes  

Science Journals Connector (OSTI)

...functional genomics, the DOE Office of Science has launched various microbial...Computing Research within the DOE Office of Science are implementing the GTL program...We especially thank the DOE Office of Science Biological and Environmental...

Jizhong Zhou; Jeffrey H. Miller

2002-08-01T23:59:59.000Z

66

Agricultural Microbes Genome 2: First Glimpses into the Genomes of Plant-Associated Microbes  

Science Journals Connector (OSTI)

...occurring. This new era of research allows a comprehensive study...Genome Conference. Meeting abstracts are archived on the World Wide...United States Department of Energy, Germantown, MD) discussed...Science Foundation Plant Genome Research Program, will also include...

Sophien Kamoun; Saskia A. Hogenhout

67

Experimental genomics of fitness in yeast  

Science Journals Connector (OSTI)

...Review articles 1001 70 129 Experimental genomics of fitness in yeast Graham Bell * * graham...084533 ) Liti, G. , 2009 Population genomics of domestic and wild yeasts. Nature...1126/science.1091317 ) Experimental genomics of fitness in yeast. | The set of single-gene...

2010-01-01T23:59:59.000Z

68

Rice functional genomics research in China  

Science Journals Connector (OSTI)

...compiled by Zhu Chen Rice functional genomics research in China Bin Han 1 7 * Yongbiao...People's Republic of China Rice functional genomics is a scientific approach that seeks to...facilitated research in rice functional genomics in China. The Ministry of Science and...

2007-01-01T23:59:59.000Z

69

Communicating Genomics:GTL  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

DOE Joint Genome Institute User Meeting Sponsored By U.S. Department of Energy Office of Science March 24-26, 2010 Walnut Creek Marriott Walnut Creek, California iii Contents Speaker Presentations ......................................................................................... 1 Poster Presentations........................................................................................... 11 Attendees............................................................................................................. 67 Author Index ...................................................................................................... 75 iv Posters alphabetical by first author. *Presenting author 1 Speaker Presentations Abstracts alphabetical by speaker

70

Genomics ace quits Japan  

Science Journals Connector (OSTI)

... end he was preparing to leave for the University of Chicago in Illinois, frustrated by Japan's lack of support for genomics and doubtful that the country would ever take a ... He is one of the country's best-funded researchers and has led some of Japan's biggest science projects. In addition, he is a successful biotechnology entrepreneur, having ...

David Cyranoski

2012-02-01T23:59:59.000Z

71

Ancient genomics  

Science Journals Connector (OSTI)

...2015 review-article PART IV: ANCIENT GENOMICS 1001 70 198 Discussion meeting issue...author and source are credited. Ancient genomics Clio Der Sarkissian Morten E. Allentoft...field of aDNA has entered the new era of genomics and has provided valuable information...

2015-01-01T23:59:59.000Z

72

is a Bioinformatics Scientist at the Institute for Genomic  

E-Print Network [OSTI]

Mihai Pop is a Bioinformatics Scientist at the Institute for Genomic Research. He earned his PhD in Computer Science from Johns Hopkins University in 2000. His research interests include genome assembly and comparative genomics. Adam Phillippy is a Bioinformatics Software Engineer at The Institute for Genomic

Salzberg, Steven

73

Genome duplications (polyploidy) / ancientGenome duplications (polyploidy) / ancient genome duplications (genome duplications (paleopolyploidypaleopolyploidy))  

E-Print Network [OSTI]

Genome duplications (polyploidy) / ancientGenome duplications (polyploidy) / ancient genome duplications (genome duplications (paleopolyploidypaleopolyploidy)) Mechanism? e.g. a diploid cell undergoes;Paramecium genome duplicationsParamecium genome duplications #12;Comparison of two scaffolds originating from

Utrecht, Universiteit

74

Genomic medicine: genetic variation and its impact on the future of health care  

Science Journals Connector (OSTI)

...sequence of the human genome. Science. 291...metabolomic assessments of human health and nutrition...for Biotechnology Information. Nucleic Acids Res...care. | Advances in genome technology and other fruits of the Human Genome Project are playing a growing...

2005-01-01T23:59:59.000Z

75

Comparative Microbial Genomics group CenterforBiologicalSequenceAnalysisTheTechnicalUniversityofDenmarkDTU  

E-Print Network [OSTI]

Comparative Microbial Genomics group Centerfor systematics - is it relevant to modern science? Istanbul, Turkey 8 August, 2008 - or - What can genomics tell us about Vibrio species? Discovering natural groups in Vibrio #12;Comparative Microbial Genomics

Ussery, David W.

76

JGI - Structural Genomics Program  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Structural Genomics Program Structural Genomics Program The structural characterization of proteins of unknown function can be described as structural genomics, an approach in which structure determination by X-ray crystallography supplies key functional information. This is exemplified by studies of the carboxysome. The structures of the first carboxysome shell proteins (Kerfeld et al., Science 2005) confirmed earlier hypotheses that they are indeed the basic building blocks of the carboxysome shell; the quaternary structure and the higher order assemblies of the proteins in the crystals provided insight into how they assemble into shell facets. Likewise, our structure of the carboxysome component CsoS3 revealed that it was a member of the beta-carbonic family, despite having no detectable sequence homology at the level of primary structure

77

Genome Engineering  

SciTech Connect (OSTI)

Dan Voytas, University of Minnesota, at the 9th Annual Genomics of Energy & Environment Meeting on March 20, 2014 in Walnut Creek, Calif

Voytas, Dan [University of Minnesota

2014-03-20T23:59:59.000Z

78

Science  

Science Journals Connector (OSTI)

As a self-confessed purveyor of ``frequently outrageous views,'' Steve Fuller can be relied on for a spirited and provocative text - and so this proves. Jerry Ravetz's gushing endorsement on the back cover claims that the public's understanding of science ``will never be the same again'' and that the book proves Steve Fuller to be ``actually science's best friend.'' But those of an orthodox scientific persuasion (though perhaps not his intended audience) are likely to be provoked into dyspeptic displeasure by the first few sideswipes at what they hold most dear. This short text comprises one volume of the series `` Concepts in Social Science,'' in publishing order sandwiched between Rights and Liberalism. Its expressed aim is that the reader come away thinking ``that the idea and institution of `science' go to the very heart of what the social sciences are about.'' In a style that is always inspired but for all save the cognoscenti can sometimes verge on the abstruse, Fuller argues that social and scientific realities are inextricably intertwined. Science's implausible knowledge claims of detachment and objectivity succeed only in perpetuating self-delusion, sowing the seeds for science's own demise. For those familiar with the sociology of scientific knowledge (SSK) debates, the overall message will not be entirely new - and indeed the book is in part a reworking of some of Fuller's previously-published journal articles - but the liveliness of this contentious prose and its immodest, sweeping polemical style present a critical case against science that is often uncomfortably near the bone. What is impressive is Fuller's intellectual boldness in weaving together a wealth of sociological, philosophical and historical arguments that aim to reveal for public scrutiny the true nature of science. The picture of science created is of its frailty and everydayness - qualities that Fuller claims have been disguised by an unattractive mix of intellectual cunning and social naivet from scientists. Fuller portrays a lay public that combines insight and innocence. Sometimes the public can see through science's ploys for extravagant research proposals, thereby ``displaying a fundamentally sound instinctive response to science.'' At other times, the public is foolish enough to regard scientific knowledge as distinct and authoritative - ``reliable'' lay beliefs about science he says are sadly rare. Thus, in Fuller's eyes, misunderstandings of science abound. Whereas some critics see the yearly panjandrum that constitutes Science Weeks as a clumsy and politically naive stab at ``public relations,'' Fuller sees darker forces of ignorance at work - ``evidence of the scientific community misunderstanding something significant about the social conditions that enable its existence.'' Tackling the public understanding of science (PUS) debate in such a spirit in Chapter 1 sets the tone for the protracted dissection of science that follows. But Fuller's aim is more to do with the revelation of sociological phenomena than with ridicule of science. For example, in Chapter 2 the idiosyncrasies of particular scientific disciplines are picked apart (in the best sociological tradition, physics comes in for a good deal of epistemological stick). Fuller succeeds in portraying the various branches of science as fundamentally different, with distinct working practices shaped by different histories and presumptions. Why, the author then muses, are interdisciplinary wars within science rare, in contrast to social science? With such questions to crack, science is rich pickings for sociological inquiry. In Chapter 3, Fuller's concern is the many-layered meanings of the terms science, scientific and scientists. Here the author takes us through the sociological and philosophical twists and turns of meaning with ideological ease, neatly contrasting today's science with that of the past. For example, long gone is science's unquestioned claim always to serve the best interest of the state; now science is self-serving. Much missed too is science's ability to stab

Jeff Thomas, Centre for Science Education, The Open

1998-01-01T23:59:59.000Z

79

A Taste of Algal Genomes from the Joint Genome Institute  

SciTech Connect (OSTI)

Algae play profound roles in aquatic food chains and the carbon cycle, can impose health and economic costs through toxic blooms, provide models for the study of symbiosis, photosynthesis, and eukaryotic evolution, and are candidate sources for bio-fuels; all of these research areas are part of the mission of DOE's Joint Genome Institute (JGI). To date JGI has sequenced, assembled, annotated, and released to the public the genomes of 18 species and strains of algae, sampling almost all of the major clades of photosynthetic eukaryotes. With more algal genomes currently undergoing analysis, JGI continues its commitment to driving forward basic and applied algal science. Among these ongoing projects are the pan-genome of the dominant coccolithophore Emiliania huxleyi, the interrelationships between the 4 genomes in the nucleomorph-containing Bigelowiella natans and Guillardia theta, and the search for symbiosis genes of lichens.

Kuo, Alan; Grigoriev, Igor

2012-06-17T23:59:59.000Z

80

Human Genome Research: Decoding DNA  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Human Genome Research: Decoding DNA Human Genome Research: Decoding DNA Resources with Additional Information Charles DeLisi As head of DOE's Office of Health and Environmental Research, Charles DeLisi played a pivotal role in proposing and initiating the Human Genome Program in 1986. The U.S. Department of Energy (DOE) has historically been active in supporting human genome research. On September 10, 2003, Secretary of Energy Spencer Abraham presented the Secretary's Gold Award to Aristides Patrinos and Francis Collins for their leadership of the government's Human Genome Project. At DOE's Office of Science, Dr. Patrinos is the Associate Director for Biological and Environmental Research. He has been a researcher at the department's Oak Ridge National Laboratory and Brookhaven National Laboratory.

Note: This page contains sample records for the topic "bssd genomic science" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


81

SCIENCE  

Science Journals Connector (OSTI)

SCIENCE ... Sedoheptulose phosphate may be an important intermediate in carbohydrate metabolism in animals as well as in plants, the NIH scientists observe. ... NOL Makes Magnetic Material ...

1952-06-23T23:59:59.000Z

82

Comparative genomics and genome evolution in yeasts  

Science Journals Connector (OSTI)

...Sternberg and Janet Thornton Comparative genomics and genome evolution in yeasts Kenneth...powerful model system for comparative genomics research. The availability of multiple...cerevisiae |evolution|bioinformatics|genomics| 1. Introduction The rationale put...

2006-01-01T23:59:59.000Z

83

November 2004 / Vol. 54 No. 11 BioScience 991 Atidal wave in the biological sciences, caused by  

E-Print Network [OSTI]

, caused by the advent of genomic techniques and data, has begun to sweep across the fields of evolutionary of genome biology,or genomics, surged in the late 1980s under the impetus of the Human Genome Project and functional questions. The National Plant Genome Initiative, which brought genomics to the plant sciences

Liu, Zhongchi

84

SCIENCE  

Science Journals Connector (OSTI)

SCIENCE ... Neutral V-particles were first discovered in 1947 at the University of Manchester where researchers observed v-shaped tracks in a magnetic cloud chamber exposed to cosmic rays. ...

1953-08-17T23:59:59.000Z

85

Genome Analyses and Supplement Data from the International Populus Genome Consortium (IPGC)  

DOE Data Explorer [Office of Scientific and Technical Information (OSTI)]

The sequencing of the first tree genome, that of Populus, was a project initiated by the Office of Biological and Environmental Research in DOEs Office of Science. The International Populus Genome Consortium (IPGC) was formed to help develop and guide post-sequence activities. The IPGC website, hosted at the Oak Ridge National Laboratory, provides draft sequence data as it is made available from DOE Joint Genome Institute, genome analyses for Populus, lists of related publications and resources, and the science plan. The data are available at http://www.ornl.gov/sci/ipgc/ssr_resource.htm.

International Populus Genome Consortium (IPGC)

86

Fungal Genomics Program  

E-Print Network [OSTI]

strains Comparative genomics and transcriptomics of xyloseFungal Genomics Program Igor Grigoriev 1 * (complex communities Fungal Genomics Program Igor Grigoriev

Grigoriev, Igor

2012-01-01T23:59:59.000Z

87

NMR and Structural Genomics  

Science Journals Connector (OSTI)

NMR and Structural Genomics ... The role of NMR in structural genomics is outlined, with particular emphasis on using protein domains as targets. ... Targets in Structural Genomics ...

David Staunton; Jo Owen; Iain D. Campbell

2002-12-07T23:59:59.000Z

88

Discovering Geometric Patterns in Genomic Data Wenxuan Gao  

E-Print Network [OSTI]

Discovering Geometric Patterns in Genomic Data Wenxuan Gao Department of Computer Science University of Illinois at Chicago wgao5@uic.edu Christopher Brown Institute for Genomics & Systems Biology caseybrown@uchicago.edu Robert L. Grossman Institute for Genomics & Systems Biology robert.grossman @uchicago

Grossman, Robert

89

MAP: SEARCHING LARGE GENOME DATABASES TAMER KAHVECI AMBUJ SINGH  

E-Print Network [OSTI]

faster than BLAST. 1 Introduction The growth in the amount of genomic information has spurred increasedMAP: SEARCHING LARGE GENOME DATABASES TAMER KAHVECI AMBUJ SINGH Department of Computer Science applications require comparison of large genome strings. Current techniques suffer from both disk I

Kahveci, Tamer

90

Current developments in genomics challenge the established framework of  

E-Print Network [OSTI]

Current developments in genomics challenge the established framework of biomedical ethics because the empirical facts of the genomic science change too fast for the reflections of ethics to keep pace with for pragmatic moral guidance1 . Recent revelations about the human genome, such as the abundance of copy

Church, George M.

91

Translational genomics of Vegetable Crops Las Vegas, NV  

E-Print Network [OSTI]

Translational genomics of Vegetable Crops Las Vegas, NV July 21, 2005 David Francis and Allen Van Deynze At the recent ASHS meetings in Las Vegas, a workshop "Translational Genomics of Vegetable Crops interventions" (Minna and Gazdar, 1996). In applied plant science, "translational genomics" implies

Douches, David S.

92

Post-genomic science: cross-disciplinary and large-scale collaborative research and its organizational and technological challenges for the scientific research process  

Science Journals Connector (OSTI)

...and medicine. It is Big Science in the sense...increasing need for the Big Science approach has...access to very large data collections, very...by analogy with the electricity grid), in that the...and how to represent data collected from one...Though adopting a Big Science approach may...

2006-01-01T23:59:59.000Z

93

Science  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

149802 149802 , 1291 (2007); 318 Science et al. L. Ozyuzer, Superconductors Emission of Coherent THz Radiation from www.sciencemag.org (this information is current as of November 29, 2007 ): The following resources related to this article are available online at http://www.sciencemag.org/cgi/content/full/318/5854/1291 version of this article at: including high-resolution figures, can be found in the online Updated information and services, http://www.sciencemag.org/cgi/content/full/318/5854/1291/DC1 can be found at: Supporting Online Material found at: can be related to this article A list of selected additional articles on the Science Web sites http://www.sciencemag.org/cgi/content/full/318/5854/1291#related-content http://www.sciencemag.org/cgi/content/full/318/5854/1291#otherarticles

94

SCience  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

all all SCience Chicago Office Environment, Safety and Health Functions, Responsibilities, and Authorities Manual December 2012 ~5 {?JI-- l L-H1- I Roxanne E. Purucker, Manager Date SC-CH FRAM Revision 7 Office of Science - Chicago Office SC-CH Revision History TITLE: SC-CH Functions, Responsibilities, and Authorities Manual POINT OF CONTACT: Karl Moro SCMS MANAGEMENT SYSTEM: Environment, Safety and Health (ES&H) TO BE UPDATED: December 31, 2013 Revision Date Reason/Driver Description 5 Oct 10 Annual review and revision of the SC-CH ES&H Functions, Responsibilities, and Authorities Manual Changes were primarily made to address administrative and organizational changes and general improvement of text and presentation. I 6 Nov 11 Annual review and revision of

95

DOE Joint Genome Institute: Soybean Genome Analysis Reveals Pathways for  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

January 13, 2010 January 13, 2010 Soybean Genome Analysis Reveals Pathways for Improving Biodiesel, Disease Resistance, and Reducing Waste Runoff WALNUT CREEK, CA-Soybean, one of the most important global sources of protein and oil, is now the first legume species with a published complete draft genome sequence. The sequence and its analysis appear in the January 14 edition of the journal Nature. The research team comprised 18 institutions, including the U.S. Department of Energy Joint Genome Institute (DOE JGI), the U.S. Department of Agriculture-Agricultural Research Service (USDA-ARS), Purdue University and the University of North Carolina at Charlotte. The DOE, National Science Foundation, USDA and United Soybean Board supported the research. helix made of soybeans

96

DOE Joint Genome Institute: New Genomic Model Defines Microbes by  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

September 8, 2009 September 8, 2009 New Genomic Model Defines Microbes by Diet-Provides Tool for Tracking Environmental Change WALNUT CREEK, CA-In line with the U.S. Department of Energy (DOE) interest in characterizing the biotic factors involved in global carbon cycling, the DOE Joint Genome Institute (JGI) characterizes a diverse array of plants, microorganisms, and the communities in which they reside to inform options for reducing and stabilizing atmospheric greenhouse gases. Through a novel genomic approach detailed in the September 7 online edition and on the cover September 14 of the journal Proceedings of the National Academy of Sciences, an international team of scientists led by the University of New South Wales and the DOE JGI demonstrates how the microbial diversity of the oceans can be analyzed without necessarily

97

UCSC cancer genomics browser.  

Science Journals Connector (OSTI)

...Chicago, IL Abstract 5087: UCSC Cancer Genomics Browser 2.0 Jingchun Zhu 1 Brian Craft...and analyze that data. The UCSC Cancer Genomics Browser (https://genome-cancer...enhances the interpretability of the cancer genomics information. UCSC Cancer Genomics Browser...

J Zhu; JZ Sanborn; T Wang; F Hsu; S Benz; C Szeto; L Esserman; D Haussler

2009-01-15T23:59:59.000Z

98

Landscape evolutionary genomics  

Science Journals Connector (OSTI)

...1001 60 70 129 Landscape evolutionary genomics David B. Lowry * * davidbryantlowry...com University Program in Genetics and Genomics, , Box 3565 Duke University Medical...genetics|adaptation|landscape ecology|genomics|natural selection|GIS| 1. Introduction...

2010-01-01T23:59:59.000Z

99

The Human Genome From human genome to other  

E-Print Network [OSTI]

genome to health Structural Genomics initiative #12;What is the Human Genome Project? · U.S. govtThe Human Genome Project From human genome to other genomes and to gene function June 2000 From that arise from genome research #12;The Human Genome Project Project began in 1990 as a $3 billion, 15-year

Linial, Michal

100

E-Print Network 3.0 - aspergillus niger genome-wide Sample Search...  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

of Marine Benthic Ecology and Evolution, Collection: Biology and Medicine ; Environmental Sciences and Ecology 14 Genome sequencing and analysis of the versatile cell...

Note: This page contains sample records for the topic "bssd genomic science" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


101

The Dynamic Nature of Eukaryotic Genomes Laura Wegener Parfrey,* Daniel J. G. Lahr,* and Laura A. Katz*  

E-Print Network [OSTI]

The Dynamic Nature of Eukaryotic Genomes Laura Wegener Parfrey,* Daniel J. G. Lahr,* and Laura A of Biological Sciences, Smith College, Northampton, MA Analyses of diverse eukaryotes reveal that genomes of examples of genome dynamism is accelerating as genome sequences are completed from diverse eukaryotes

Katz, Laura

102

Funding needed for private enterprise in genome sequencing  

Science Journals Connector (OSTI)

... Sciences advisory committee on the human genome project and announcing his intention to start a private company that would push ahead rapidly with both mapping and sequencing the human genome. ... near term, there also seems to be far less disagreement over the role of the private sector."While everyone else is fussing, I might as well go do it ...

Seth Shulman

1988-03-31T23:59:59.000Z

103

A framework for identification of actionable cancer genome dependencies in small cell lung cancer  

Science Journals Connector (OSTI)

...by the German Ministry of Science and Education as part of the National Network...Bayesian inference in MrBayes, with poster probabilities...Alignment and Evolutionary Analysis. Science 320:1632-1635. Python genome...

Martin L. Sos; Felix Dietlein; Martin Peifer; Jakob Schttle; Hyatt Balke-Want; Christian Mller; Mirjam Koker; Andr Richters; Stefanie Heynck; Florian Malchers; Johannes M. Heuckmann; Danila Seidel; Patrick A. Eyers; Roland T. Ullrich; Andrey P. Antonchick; Viktor V. Vintonyak; Peter M. Schneider; Takashi Ninomiya; Herbert Waldmann; Reinhard Bttner; Daniel Rauh; Lukas C. Heukamp; Roman K. Thomas

2012-01-01T23:59:59.000Z

104

Genomic Encyclopedia of Fungi  

SciTech Connect (OSTI)

Genomes of fungi relevant to energy and environment are in focus of the Fungal Genomic Program at the US Department of Energy Joint Genome Institute (JGI). Its key project, the Genomics Encyclopedia of Fungi, targets fungi related to plant health (symbionts, pathogens, and biocontrol agents) and biorefinery processes (cellulose degradation, sugar fermentation, industrial hosts), and explores fungal diversity by means of genome sequencing and analysis. Over 150 fungal genomes have been sequenced by JGI to date and released through MycoCosm (www.jgi.doe.gov/fungi), a fungal web-portal, which integrates sequence and functional data with genome analysis tools for user community. Sequence analysis supported by functional genomics leads to developing parts list for complex systems ranging from ecosystems of biofuel crops to biorefineries. Recent examples of such parts suggested by comparative genomics and functional analysis in these areas are presented here.

Grigoriev, Igor

2012-08-10T23:59:59.000Z

105

Improved Yield and Diverse Finished Bacterial Genomes using Pacific Biosciences RS II SMRT Sequencing  

E-Print Network [OSTI]

Improved Yield and Diverse Finished Bacterial Genomes using Pacific Biosciences RS II SMRT-Cruz, Alvaro Godinez, Luke J. Tallon Institute for Genome Sciences, University of Maryland School of Medicine, effective, and highly accurate platform for generation of complete microbial genome sequences. As early

Weber, David J.

106

Integrating population genetics and conservation biology in the era of genomics  

Science Journals Connector (OSTI)

...and conservation biology in the era of genomics N. Joop Ouborg * * j.ouborg@science...Department of Molecular Ecology and Ecological Genomics, Institute for Water and Wetland Research...genetics is evolving into conservation genomics, while at the same time basic and applied...

2010-01-01T23:59:59.000Z

107

Mutation Research 504 (2002) 91100 Bystander effects in radiation-induced genomic instability  

E-Print Network [OSTI]

Mutation Research 504 (2002) 91­100 Bystander effects in radiation-induced genomic instability recombination and other phenotypes associated with genomic instability. © 2002 Elsevier Science B.V. All rights reserved. Keywords: Bystander effects; Genomic instability; Ionizing radiation 1. Introduction Exposure

108

Assembly free comparative genomics of short-read sequence data discovers the needles in the haystack  

E-Print Network [OSTI]

Assembly free comparative genomics of short-read sequence data discovers the needles of Biological Sciences, Texas Tech University, Lubbock, TX 79409, USA Abstract Most comparative genomic analyses an assembly free analysis of SRS data that discovers sequence variants among focal genomes by tabulating

109

Genome Biology 2004, 5:R92 commentreviewsreportsdepositedresearchrefereedresearchinteractionsinformation  

E-Print Network [OSTI]

Federal Institute of Technology (ETH), Zurich. Colab, ETH, Zurich 8092, Switzerland. Seminar for Statistics, ETH, Zurich 8092, Switzerland. §Institute for Plant Sciences and Functional Genomics Center Zurich, ETH, Zurich 8092, Switzerland. ¶Computer Engineering and Networks Laboratory, ETH, Zurich 8092

Zitzler, Eckart

110

Genomic Sequence Comparisons, 1987-2003 Final Report  

SciTech Connect (OSTI)

This project was to develop new DNA sequencing and RNA and protein quantitation methods and related genome annotation tools. The project began in 1987 with the development of multiplex sequencing (published in Science in 1988), and one of the first automated sequencing methods. This lead to the first commercial genome sequence in 1994 and to the establishment of the main commercial participants (GTC then Agencourt) in the public DOE/NIH genome project. In collaboration with GTC we contributed to one of the first complete DOE genome sequences, in 1997, that of Methanobacterium thermoautotropicum, a species of great relevance to energy-rich gas production.

George M. Church

2004-07-29T23:59:59.000Z

111

Defining Genome Project Standards in a New Era of Sequencing (GSC8 Meeting)  

ScienceCinema (OSTI)

The Genomic Standards Consortium was formed in September 2005. It is an international, open-membership working body which promotes standardization in the description of genomes and the exchange and integration of genomic data. The 2009 meeting was an activity of a five-year funding "Research Coordination Network" from the National Science Foundation and was organized held at the DOE Joint Genome Institute with organizational support provided by the JGI and by the University of California - San Diego.

Chain, Patrick [DOE JGI

2011-04-28T23:59:59.000Z

112

The genomics of adaptation  

Science Journals Connector (OSTI)

...introduction Special feature 1001 70 197 198 The genomics of adaptation Jacek Radwan 1 * Wieslaw...One contribution to a Special Feature Genomics of adaptation. The amount and nature...aspects of the broad field of adaptation genomics. This introductory article sets up a...

2012-01-01T23:59:59.000Z

113

Genomics of human longevity  

Science Journals Connector (OSTI)

...the original work is properly cited. Genomics of human longevity P. E. Slagboom 1...progress. human longevity|longevity genomics|epigenetics and ageing| 1. Introduction...Innovation Oriented Research Programme on Genomics (SenterNovem; IGE01014 and IGE5007...

2011-01-01T23:59:59.000Z

114

Bioconversion Science & Technology  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

BSD BSD EESD ORNL Bioconversion Science and Technology BioSciences Division Home Resources Publications People BST Students Former Members Links Contact Us Research Areas Production of Fuels and Chemicals Genomes to Life Biofuel Cells Bioprocessing of Fossil Fuels Biotreatment and Bioremediation Jonathan Mielenz, leader of the Bioconversion Science and Technology Group in ORNL's Biosciences Division, is studying a microbe that could prove more cost effective than current methods in transforming cellulose from sources such as switchgrass and poplar trees into ethanol. Bioconversion Science & Technology The Bioconversion Science and Technology group performs multidisciplinary R&D for the Department of Energy's (DOE) relevant applications of bioprocessing, especially with biomass. Bioprocessing combines the

115

JGI CSP Delivers First Moss Genome  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

13, 2007 13, 2007 DOE JGI Community Sequencing Program Delivers First Moss Genome WALNUT CREEK, CA--Messages from nearly a half-billion years ago, conveyed via the inventory of genes sequenced from a present-day moss, provide clues about the earliest colonization of dry land by plants. The U.S. Department of Energy Joint Genome Institute (DOE JGI) was among the leaders of an international effort uniting more than 40 institutions to complete the first genome sequencing project of a nonvascular land plant, the moss Physcomitrella patens. The team's insights into the code that enabled this seminal emergence and dominance of land by plants are published December 13 online in Science Express. Scanning electron micrograph of Physcomitrella patens gametophores (moss shoots).

116

Querying genomic databases  

SciTech Connect (OSTI)

A natural-language interface has been developed that retrieves genomic information by using a simple subset of English. The interface spares the biologist from the task of learning database-specific query languages and computer programming. Currently, the interface deals with the E. coli genome. It can, however, be readily extended and shows promise as a means of easy access to other sequenced genomic databases as well.

Baehr, A.; Hagstrom, R.; Joerg, D.; Overbeek, R.

1991-09-01T23:59:59.000Z

117

Phylogenetic Inference Using Whole Genomes  

E-Print Network [OSTI]

Phylogenetic Inference Using Whole Genomes Bruce Rannala1 and Ziheng Yang2 1 Genome Center.yang@ucl.ac.uk Annu. Rev. Genomics Hum. Genet. 2008. 9:217­31 First published online as a Review in Advance on June 3, 2008 The Annual Review of Genomics and Human Genetics is online at genom.annualreviews.org This article

118

Fungal Genomics Program  

SciTech Connect (OSTI)

The JGI Fungal Genomics Program aims to scale up sequencing and analysis of fungal genomes to explore the diversity of fungi important for energy and the environment, and to promote functional studies on a system level. Combining new sequencing technologies and comparative genomics tools, JGI is now leading the world in fungal genome sequencing and analysis. Over 120 sequenced fungal genomes with analytical tools are available via MycoCosm (www.jgi.doe.gov/fungi), a web-portal for fungal biologists. Our model of interacting with user communities, unique among other sequencing centers, helps organize these communities, improves genome annotation and analysis work, and facilitates new larger-scale genomic projects. This resulted in 20 high-profile papers published in 2011 alone and contributing to the Genomics Encyclopedia of Fungi, which targets fungi related to plant health (symbionts, pathogens, and biocontrol agents) and biorefinery processes (cellulose degradation, sugar fermentation, industrial hosts). Our next grand challenges include larger scale exploration of fungal diversity (1000 fungal genomes), developing molecular tools for DOE-relevant model organisms, and analysis of complex systems and metagenomes.

Grigoriev, Igor

2012-03-12T23:59:59.000Z

119

Webinar: Materials Genome Initative  

Broader source: Energy.gov [DOE]

Audio recording and text version of the Fuel Cell Technologies Office webinar titled "Materials Genome Initiative," originally presented on December 2, 2014.

120

Genomic analysis of mouse tumorigenesis  

E-Print Network [OSTI]

The availability of the human and mouse genome sequences has spurred a growing interest in analyzing mouse models of human cancer using genomic techniques. Comparative genomic studies on mouse and human tumors can be ...

Tam, Mandy Chi-Mun

2006-01-01T23:59:59.000Z

Note: This page contains sample records for the topic "bssd genomic science" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


121

Abstract IA37: Clinical genomics  

Science Journals Connector (OSTI)

...Research. 15 October 2014 meeting-abstract Clinical Genomics Clinical Genomics: Oral Presentations - Invited Abstracts Abstracts...2013; San Diego, CA Abstract IA37: Clinical genomics Katherine A. Janeway Dana-Farber Cancer Institute...

Katherine A. Janeway

2014-10-15T23:59:59.000Z

122

Genomics of isolation in hybrids  

Science Journals Connector (OSTI)

...edited by Patrik Nosil and Jeffrey L. Feder Genomics of isolation in hybrids Zachariah Gompert...limitations to the study of the speciation genomics. Further progress in understanding the genomics of speciation will require large-scale...

2012-01-01T23:59:59.000Z

123

JGI - FY2002 Sequencing for the DOE Microbial Genome Program  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

2 Sequencing for the 2 Sequencing for the DOE Microbial Genome Program For status information, see the Genome Projects section. For more information about the DOE Office of Science's Microbial Genome Program, see http://microbialgenomics.energy.gov/. For more information about microbial sequencing at JGI, contact David Bruce. Eukaryotes Organism Genome Size Thalassiosira pseudonana CCMP 1335 (diatom) 32 Mb Lactic Acid Bacteria Organism Genome Size Bifidobacterium longum DJO10A 2.4 Mb Brevibacterium linens BL2 4.5 Mb Lactobacillus brevis ATCC 367 1.8 Mb Lactobacillus casei ATCC 334 2.8 Mb Lactobacillus delbrueckii ATCC BAA-365 1.6 Mb Lactobacillus gasseri ATCC 33323 1.9 Mb Lactococcus lactis subsp. cremoris SK11 2.6 Mb Leuconostoc mesenteroides ATCC 8293 2 Mb Oenococcus oeni PSU-1 1.8 Mb

124

JGI - FY2003 Sequencing for the DOE Microbial Genome Program  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

3 Sequencing for the 3 Sequencing for the DOE Microbial Genome Program For status information, see the Genome Projects section. For more information about the DOE Office of Science's Microbial Genome Program, see http://microbialgenomics.energy.gov/. For more information about microbial sequencing at JGI, contact David Bruce. Eukaryotes Organism Genome Size Emiliania huxleyi 220 Mb Ostreococcus lucimarinus 9.3 Mb Monosiga brevicollis Bacteria Organism Genome Size Anabaena variabilis ATCC 29413 7 Mb Burkholderia sp. 383 8.80 Mb Burkholderia vietnamiensis G4 8.40 Mb Chlorobium aggregatum Chlorobium chlorochromatii CaD3 2.6 Mb Chlorochromatium aggregatum Lake Dagow Crocosphaera watsonii WH 8501 6.40 Mb Kineococcus radiotolerans SRS30216 4.90 Mb Methylibium petroleiphilum PM1 4.60 Mb

125

JGI - FY2005 Sequencing for the DOE Microbial Genome Program  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

5 Sequencing for the 5 Sequencing for the DOE Microbial Genome Program For status information, see the Genome Projects section. For more information about the DOE Office of Science's Microbial Genome Program, see http://microbialgenomics.energy.gov/. For more information about microbial sequencing at JGI, contact David Bruce. Strains of Shewanella Organism Est. Genome Size Shewanella baltica OS195 5 Mb Shewanella sp. ANA-3 5 Mb Shewanella sp. MR-4 5 Mb Shewanella sp. MR-7 5 Mb Shewanella sp. W3-18-1 5 Mb Shewanella baltica OS223 5 Mb Strains of Chloroflexi Organism Est. Genome Size Chloroflexus aggregans DSM 9485 5 Mb Chloroflexus sp. Y-396-1 5 Mb Chlorothrix halophila (Candidatus) 5 Mb Herpetosiphon aurantiacus DSM 785 5 Mb Roseiflexus castenholzii HLO8 5 Mb Roseiflexus sp. strain RS-1 5 Mb

126

DOE Joint Genome Institute: DNA of Uncultured Organisms Sequenced Using  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

21, 2009 21, 2009 DNA of Uncultured Organisms Sequenced Using Novel Single-Cell Approach Download a Podcast of this Release! WALNUT CREEK, CA-Scientists from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI) and the Bigelow Laboratory for Ocean Sciences have assembled high quality, contamination-free draft genomes of uncultured biodegrading microorganisms using a novel single cell genome sequencing approach. This proof of principle study, published in the April 23 edition of the journal PLoS One, offers researchers a new method to access and decipher the information embedded in genomes of interest with only minute quantities of DNA. "Most of the microbial genomes sequenced to date are derived from organisms cultured in the laboratory," said DOE JGI Director Eddy Rubin.

127

Course Title Science for Diagnostics and Control of  

E-Print Network [OSTI]

-genome era II 9 () Wood Collections and related sciences I 10 () Introduction to wood-degrading mushrooms 11 () Wood Collections and related sciences II 12 () Conversion of biomass resources to useful

Takada, Shoji

128

Low Dose Radiation Research Program: Interaction of Genome and Cellular  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

of Genome and Cellular Micronenvioronment of Genome and Cellular Micronenvioronment Mina Bissell Life Sciences Division Lawrence Berkeley National Laboratory Why this Project While normal stoma can delay or prevent tumorigenesis, abnormal stromal components can promote tumor growth. Acquired or inherited mutations that alter stromal cell function can release the context-suppressed malignant cells. Literature spanning more than a century has shown that inflammation associated with tissue wounding can produce tunors. Radiation produces changes in reactive oxygen that are similar to inflammation and may represent a mechanism for radiation-induced damage. Project Goals To determine the underlying role of stromal alterations in controling genomic instability accompanying epithelial-mesenchyumal transformation.

129

School of Computing Science, University of Newcastle upon Tyne  

E-Print Network [OSTI]

School of Computing Science, University of Newcastle upon Tyne Exploring Microbial Genome Sequences upon Tyne, NE1 7RU, UK. #12;1 Exploring Microbial Genome Sequences to Identify Protein Families Abstract--The analysis of microbial genome sequences can identify protein families that provide potential

Newcastle upon Tyne, University of

130

Life sciences and environmental sciences  

SciTech Connect (OSTI)

The DOE laboratories play a unique role in bringing multidisciplinary talents -- in biology, physics, chemistry, computer sciences, and engineering -- to bear on major problems in the life and environmental sciences. Specifically, the laboratories utilize these talents to fulfill OHER`s mission of exploring and mitigating the health and environmental effects of energy use, and of developing health and medical applications of nuclear energy-related phenomena. At Lawrence Berkeley Laboratory (LBL) support of this mission is evident across the spectrum of OHER-sponsored research, especially in the broad areas of genomics, structural biology, basic cell and molecular biology, carcinogenesis, energy and environment, applications to biotechnology, and molecular, nuclear and radiation medicine. These research areas are briefly described.

Not Available

1992-02-01T23:59:59.000Z

131

Life sciences and environmental sciences  

SciTech Connect (OSTI)

The DOE laboratories play a unique role in bringing multidisciplinary talents -- in biology, physics, chemistry, computer sciences, and engineering -- to bear on major problems in the life and environmental sciences. Specifically, the laboratories utilize these talents to fulfill OHER's mission of exploring and mitigating the health and environmental effects of energy use, and of developing health and medical applications of nuclear energy-related phenomena. At Lawrence Berkeley Laboratory (LBL) support of this mission is evident across the spectrum of OHER-sponsored research, especially in the broad areas of genomics, structural biology, basic cell and molecular biology, carcinogenesis, energy and environment, applications to biotechnology, and molecular, nuclear and radiation medicine. These research areas are briefly described.

Not Available

1992-02-01T23:59:59.000Z

132

National Commission on Forensic Science (NCFS) and  

E-Print Network [OSTI]

National Commission on Forensic Science (NCFS) and Organization of Scientific Area Committees (OSAC and Technology NIST Fellow & Special Assistant to the Director for Forensic Science Vice-Chair, National Commission on Forensic Science GenomeID Forum Greenville, NC September 10, 2014 #12;Material Measurement

133

Fuzzy Genome Sequence Assembly for Single and Environmental Genomes  

E-Print Network [OSTI]

Fuzzy Genome Sequence Assembly for Single and Environmental Genomes Sara Nasser, Adrienne Breland. Traditional methods obtain a microorganism's DNA by culturing it in- dividually. Recent advances in genomics microbial commu- nities are often very complex with tens and hundreds of species. Assembling these genomes

Nicolescu, Monica

134

COMPUTATIONAL GENOMICS: MAPPING, COMPARISON, AND ANNOTATION OF GENOMES  

E-Print Network [OSTI]

address key issues in the different stages of genome research: planning of a genome sequencing project areas: (1) In relation to the early stages of a genome project, we address physical mapping, and we structure and sequence analysis of orthologous human and mouse genomic regions, and develop ROSETTA

Batzoglou, Serafim

135

Eukaryotic Genomics Data from the DOE Joint Genome Institute (JGI)  

DOE Data Explorer [Office of Scientific and Technical Information (OSTI)]

From the JGI webportal users can choose Eukaryotic genomes from a photo list, access the JGI FTP directories to download data files, use the Tree of Life navigation tool, or choose a genome and go directly to a website specific to that one genome. The individual sites include direct access to download sequence files, BLAST, search, view and navigate the genomic annotations.

136

Institute for Plant Genomics and Biotechnology GENOMICS AND BIOTECHNOLOGY  

E-Print Network [OSTI]

Institute for Plant Genomics and Biotechnology GENOMICS AND BIOTECHNOLOGY A multidisciplinary organization, the Institute for Plant Genomics and Biotechnology is a composed of faculty members representing projects at the Institute for Plant Genomics and Biotechnology include the development of transgenic plants

137

Update on Genomic Studies of Algae Paths toward Algal Genomics  

E-Print Network [OSTI]

Update on Genomic Studies of Algae Paths toward Algal Genomics Arthur R. Grossman* The Carnegie of genomic information that is being used to help researchers understand the gene content of organisms, how the expression of genes. In this introductory manuscript, I discuss select algae and how genomics is impacting

138

NREL Support for a Functional Genomics Approach to Investigate Regulation of Phenolic Glycoside: Cooperative Research and Development Final Report, CRADA number CRD-07-00218  

SciTech Connect (OSTI)

NREL and MTU collaborated on a proposal 'A Functional Genomics Approach to Investigate Regulation of Phenolic Glycoside Metabolism in Populus' funded by the National Science Foundation.

Davis, M.

2010-07-01T23:59:59.000Z

139

Human Genome Program  

SciTech Connect (OSTI)

The DOE Human Genome program has grown tremendously, as shown by the marked increase in the number of genome-funded projects since the last workshop held in 1991. The abstracts in this book describe the genome research of DOE-funded grantees and contractors and invited guests, and all projects are represented at the workshop by posters. The 3-day meeting includes plenary sessions on ethical, legal, and social issues pertaining to the availability of genetic data; sequencing techniques, informatics support; and chromosome and cDNA mapping and sequencing.

Not Available

1993-01-01T23:59:59.000Z

140

Genomics and Malaria Control  

Science Journals Connector (OSTI)

...-targeted and human-targeted approaches but in reality, malaria results from three intimately interacting organisms (Figure 1). Fortunately, genomics-based approaches to malaria offer the strategic advantage of considering all three participants through integrative data sets, allowing us to identify... The genomic sequences of the malarial vector, parasite, and host the three components of the malarial transmission system have been known for at least two years. It may be possible to counter the disease by harnessing this genomic information to launch a strategic attack on the parasite during vulnerable stages of its life cycle.

Vernick K.D.; Waters A.P.

2004-10-28T23:59:59.000Z

Note: This page contains sample records for the topic "bssd genomic science" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


141

ACSF Topical Lunch Summary Strengthening interdisciplinary graduate education for biodiversity sciences at  

E-Print Network [OSTI]

on "Integrating Genomics and Science Communication for Biodiversity Research and Conservation" being prepared will be realized gradually. Participants (15) Kelly Zamudio, EEB Genomics & Communic. IGERT proposal PI Andy Bass

Angenent, Lars T.

142

The Center for integrative genomics  

E-Print Network [OSTI]

The Center for integrative genomics Report 2005­2006 #12;Presentation Director's message 4 Scientific advisory committee 6 Organigram of the CIG 7 research The structure and function of genomes and their evolution alexandrereymond ­ Genome structure and expression 10 henrikKaessmann ­ Evolutionary genomics 12

Kaessmann, Henrik

143

Sequencing the Rice Genome  

Science Journals Connector (OSTI)

...University of Delhi and Nagendra Singh of the Indian Agricultural Research Institute) and...representing a single contig. On this point, Sasaki presented evidence from the RGP...ncgr.ac.cn/index.html Indian Rice Genome Program (University of Delhi...

Nancy A. Eckardt

144

Genome mining for methanobactins  

Science Journals Connector (OSTI)

Methanotrophic bacteria have potential as a biological methane sink, and methanobactins are a set of peptides important in regulating this activity. A genome mining study highlights genes involved in methanobactin production, but also suggests that not all methanotrophs have them.

Grace E Kenney; Amy C Rosenzweig

2013-02-26T23:59:59.000Z

145

Annotating individual human genomes  

Science Journals Connector (OSTI)

Advances in DNA sequencing technologies have made it possible to rapidly, accurately and affordably sequence entire individual human genomes. As impressive as this ability seems, however, it will not likely amount to much if one cannot extract meaningful information from individual sequence data. Annotating variations within individual genomes and providing information about their biological or phenotypic impact will thus be crucially important in moving individual sequencing projects forward, especially in the context of the clinical use of sequence information. In this paper we consider the various ways in which one might annotate individual sequence variations and point out limitations in the available methods for doing so. It is arguable that, in the foreseeable future, DNA sequencing of individual genomes will become routine for clinical, research, forensic, and personal purposes. We therefore also consider directions and areas for further research in annotating genomic variants.

Ali Torkamani; Ashley A. Scott-Van Zeeland; Eric J. Topol; Nicholas J. Schork

2011-01-01T23:59:59.000Z

146

Genomic library construction  

SciTech Connect (OSTI)

Compositions and methods for amplifying nucleic acid sequences from a single cell are provided. Compositions and methods for constructing a genomic library from a single cell are also provided.

Church, George M. (Brookline, MA); Zhang, Kun (San Diego, CA)

2011-07-26T23:59:59.000Z

147

Biological Sciences at NERSC  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Biological Sciences Biological Sciences Biological Sciences Better knowledge of biomolecules and processes they undergo is vital for achieving a predictive, systems-level understanding of complex biological systems that have potential use in bioenergy, carbon cycling and biosequestration, and biogeochemistry. Areas that NERSC helps to enable include: Research activities using genomics and systems biology to understand plants and microbes. Developing and applying atomistic-molecular to coarse-grained mathematical models of potential energy surfaces, characterizing these surfaces through sampling techniques and finally generating ensemble or time averaged physical properties of biological phenomena. Fundamental research in the redesign of microbial metabolic processes to harness their potential in the conversion of biomass to

148

Human Genome Education Program  

SciTech Connect (OSTI)

The funds from the DOE Human Genome Program, for the project period 2/1/96 through 1/31/98, have provided major support for the curriculum development and field testing efforts for two high school level instructional units: Unit 1, ''Exploring Genetic Conditions: Genes, Culture and Choices''; and Unit 2, ''DNA Snapshots: Peaking at Your DNA''. In the original proposal, they requested DOE support for the partial salary and benefits of a Field Test Coordinator position to: (1) complete the field testing and revision of two high school curriculum units, and (2) initiate the education of teachers using these units. During the project period of this two-year DOE grant, a part-time Field-Test Coordinator was hired (Ms. Geraldine Horsma) and significant progress has been made in both of the original proposal objectives. Field testing for Unit 1 has occurred in over 12 schools (local and non-local sites with diverse student populations). Field testing for Unit 2 has occurred in over 15 schools (local and non-local sites) and will continue in 12-15 schools during the 96-97 school year. For both curricula, field-test sites and site teachers were selected for their interest in genetics education and in hands-on science education. Many of the site teachers had no previous experience with HGEP or the unit under development. Both of these first-year biology curriculum units, which contain genetics, biotechnology, societal, ethical and cultural issues related to HGP, are being implemented in many local and non-local schools (SF Bay Area, Southern California, Nebraska, Hawaii, and Texas) and in programs for teachers. These units will reach over 10,000 students in the SF Bay Area and continues to receive support from local corporate and private philanthropic organizations. Although HGEP unit development is nearing completion for both units, data is still being gathered and analyzed on unit effectiveness and student learning. The final field testing result from this analysis will contribute to the final revisions of each unit during the second-year of this grant.

Richard Myers; Lane Conn

2000-05-01T23:59:59.000Z

149

Human Whole-Genome Shotgun Sequencing James L. Weber1,3  

E-Print Network [OSTI]

different human donors would be sheared, size-selected, and cloned into E. coli. Insert sizes would fallHuman Whole-Genome Shotgun Sequencing James L. Weber1,3 and Eugene W. Myers2 1 Center for Medical Science, University of Arizona, Tucson, Arizona 85721 Large-scale sequencing of the human genome is now

Batzoglou, Serafim

150

Franois Pompanon and Aurlie Bonin (eds.), Data Production and Analysis in Population Genomics: Methods and Protocols, Methods in Molecular Biology, vol. 888, DOI 10.1007/978-1-61779-870-2_17, Springer Science+Business Media New York 2012  

E-Print Network [OSTI]

correlate allelic frequencies and environmental variables such as precipitation, temperature, or sun, temperature, sun radia- tion, etc.) (4, 5). In this case, the geographic coordinates (spatial variables Variables in the Context of Allele Distribution Models: Detecting Signatures of Selection in the Genome

151

Nucleomorph genomes: structure, function, origin and evolution  

E-Print Network [OSTI]

Nucleomorph genomes: structure, function, origin and evolution John M. Archibald Summary and four genomes--two nuclear genomes, an endosymbiont- derived plastid genome and a mitochondrial genome derived from the host cell. Like mitochondrial and plastid genomes, the genome of the endosymbiont nucleus

Archibald, John

152

Materials Science  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Materials Science science-innovationassetsimagesicon-science.jpg Materials Science National security depends on science and technology. The United States relies on Los Alamos...

153

Plant Science 179 (2010) 553 Contents lists available at ScienceDirect  

E-Print Network [OSTI]

Plant Science 179 (2010) 553 Contents lists available at ScienceDirect Plant Science journal that allow the integration of genetic, genomic, metabolic, molecular, and biophysical approaches. At the same mechanisms in management of weedy or invasive species. Similarly, studies of the biophysics of dry systems

Bradford, Kent

154

Bioinformatics and Genomics Degree Requirements Booklet  

E-Print Network [OSTI]

Bioinformatics and Genomics Degree Requirements Booklet Fall 2010 #12;Contents Course Requirements Bioinformatics and Genomics Curriculum -------------------------------------------------------8 General #12;Bioinformatics and Genomics Option (BG

dePamphilis, Claude

155

JGI - FY2004 Sequencing for the DOE Microbial Genome Program  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

4 Sequencing for the 4 Sequencing for the DOE Microbial Genome Program For status information, see the Genome Projects section. For more information about the DOE Office of Science's Microbial Genome Program, see http://microbialgenomics.energy.gov/. For more information about microbial sequencing at JGI, contact David Bruce. Chlorobia (avg:~2.4Mb) Organism Genome Size Chlorobium ferrooxidans DSM 13031 2.40 Mb Chlorobium limicola DSMZ 245 2.4 Mb Chlorobium phaeobacteroides BS1 2.4 Mb Chlorobium phaeobacteroides DSM 266 2.3 Mb Pelodictyon luteolum DSMZ 273 2.3 Mb Pelodictyon phaeoclathratiforme BU-1 (DSM 5477) 2.4 Mb Prosthecochloris aestuarii DSM 271 2.4 Mb Prosthecochloris vibrioformis DSM 265 2.4 Mb Chlorobaculum parvum n/a Chloroherpeton thalassium n/a Model Syntrophic Consortium

156

JGI - FY2001 Sequencing for the DOE Microbial Genome Program  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

1 Sequencing for the 1 Sequencing for the DOE Microbial Genome Program For status information, see the Genome Projects section. For more information about the DOE Office of Science's Microbial Genome Program, see http://microbialgenomics.energy.gov/. For more information about microbial sequencing at JGI, contact David Bruce. Organism Genome Size Burkholderia xenovorans LB400 8 Mb Chloroflexus aurantiacus J-10-fl 3 Mb Cupriavidus metallidurans CH34 6.8 Mb Cytophaga hutchinsonii ATCC 33406 4.4 Mb Desulfitobacterium halfniense DCB-2 4.7 Mb Enterococcus faecium DO 2.8 Mb Ferroplasma acidarmanus fer1 1.8 Mb Magnetococcus sp. MC-1 4.7 Mb Methanosarcina barkerii fusaro 4.8 Mb Nitrosomonas europaea ATCC 19718 2.8 Mb Nostoc punctiforme PCC 73102 9.2 Mb Novosphingobium aromaticivorans DSM 12444 4.2 Mb

157

JGI - FY2007 Sequencing for the DOE Microbial Genome Program  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

7 Sequencing for the 7 Sequencing for the DOE Microbial Genome Program For status information, see the Genome Projects section. For more information about the DOE Office of Science's Microbial Genome Program, see http://microbialgenomics.energy.gov/. For more information about microbial sequencing at JGI, contact David Bruce. Organism(s) Est. Genome Size Acremonium alcalophilum ATCC90507 40 MB Azolla Cyanobacterium, Arthrospira maxima, and Cyanobacterium JSC-1 NA bacterioplankton pool cDNA day, night, night + DOC1, night + DOC2 NA Clostridum carboxidivorans, Clostridium sp. strains, Clostridium straminisolvens, Clostridum thermocellum LQR1 DSM2360 , Clostridium thermocellum JW20 DSM 4150 Thermoanaerobacter italicus Ab9 DSM9252, T. ethanolicus X513, T. ethanoloicus X561, T. mathrani, Thermoanaerobacterium thermosaccharaolyticum, Thermoanaerobacterium xylanolyticum LX11 DSM7097 3.5-4.0 MB

158

Seventh Annual DOE Joint Genome Institute User Meeting Sponsored By  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Seventh Annual Seventh Annual DOE Joint Genome Institute User Meeting Sponsored By U.S. Department of Energy Office of Science March 20-22, 2012 Walnut Creek Marriott Walnut Creek, California Contents Speaker Presentations .......................................................................................................... 1 Poster Presentations ........................................................................................................... 13 Attendees ............................................................................................................................ 83 Author Index ....................................................................................................................... 89 Abstracts alphabetical by speaker

159

Department of Energy funds genomic research By Paula Hartman Cohen  

E-Print Network [OSTI]

Department of Energy funds genomic research By Paula Hartman Cohen News Office staff A research.S. Department of Energy (DOE) to determine whether the new field of ge- nomic science can be applied to clean DNA. "It's now our job to determine what all this genetic informa- tion can tell us about why

Lovley, Derek

160

SCIENCE CHINA Technological Sciences  

E-Print Network [OSTI]

SCIENCE CHINA Technological Sciences © Science China Press and Springer-Verlag Berlin Heidelberg and Nanosystems, Chinese Academy of Sciences, Beijing 100083, China; 2 Institute of Theoretical Physics, Lanzhou University, Lanzhou 730000, China; 3 School of Material Science and Engineering, Georgia Institute

Wang, Zhong L.

Note: This page contains sample records for the topic "bssd genomic science" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


161

Genomics of cellulolytic bacteria  

Science Journals Connector (OSTI)

The heterogeneous plant biomass is efficiently decomposed by the interplay of a great number of different enzymes. The enzyme systems in cellulolytic bacteria have been investigated by sequencing and bioinformatic analysis of genomes from plant biomass degrading microorganisms with valuable insights into the variety of the involved enzymes. This broadened our understanding of the biochemical mechanisms of plant polymer degradation and made the enzymes applicable for modern biotechnology. A list of the truly cellulolytic bacteria described and the available genomic information was examined for proteins with cellulolytic and hemicellulolytic capability. The importance of the isolation, characterization and genomic sequencing of cellulolytic microorganisms and their usage for sustainable energy production from biomass and other residues, is emphasized.

Daniela E Koeck; Alexander Pechtl; Vladimir V Zverlov; Wolfgang H Schwarz

2014-01-01T23:59:59.000Z

162

Microbial Genomics Data from the DOE Joint Genome Institute (JGI)  

DOE Data Explorer [Office of Scientific and Technical Information (OSTI)]

As of March 2008, The Joint Genome Institute has released 296 Prokaryotic microbial sites, with 216 in finished status.

163

The rice genome project in?Japan  

Science Journals Connector (OSTI)

The rice genome project in Japan Takuji Sasaki Rice Genome Research Program, National...Kannondai 2-chome, Tsukuba, Ibaraki 305, Japan Since 1991, the Rice Genome Research Program in Japan has carried out rice genomics, such as large-scale...

Takuji Sasaki

1998-01-01T23:59:59.000Z

164

Mammalian comparative genomics and epigenomics  

E-Print Network [OSTI]

The human genome sequence can be thought of as an instruction manual for our species, written and rewritten over more than a billion of years of evolution. Taking a complete inventory of our genome, dissecting its genes ...

Mikkelsen, Tarjei Sigurd, 1978-

2009-01-01T23:59:59.000Z

165

Challenges in global genomics education  

Science Journals Connector (OSTI)

Abstract In spite of high expectations for the integration of genomics into medicine, it is not clear that health providers are competent to appropriately use new genomic approaches. The issue is further complicated by differences across the globe in terms of educational systems, access to genomic technologies, and priorities in health care. In this commentary we will review some of the major challenges in educating the health provider workforce about genomic medicine.

Ashwini de Abrew; Vajira H.W. Dissanayake; Bruce R. Korf

2014-01-01T23:59:59.000Z

166

Refining Restriction Enzyme Genome Maps  

Science Journals Connector (OSTI)

A genome map is an ordering of a set of clones according to their believed position on a DNA string. Simple heuristics for genome map assembly based on single restriction enzyme with complete digestion data can lead to inaccuracies and ambiguities. This ... Keywords: constraint query languages, genome mapping, set constraints

Peter Z. Revesz

1998-01-01T23:59:59.000Z

167

SHORT REVIEW Butterfly genomics eclosing  

E-Print Network [OSTI]

SHORT REVIEW Butterfly genomics eclosing P Beldade1 , WO McMillan2 and A Papanicolaou3 1 Section to an explosion of genomic data and the emergence of new research avenues. Evolutionary and ecological functional genomics, with its focus on the genes that affect ecological success and adaptation in natural populations

Beldade, Patrícia

168

Genomics in the ecological arena  

Science Journals Connector (OSTI)

...meeting-report Meeting reports 1001 60 69 70 129 Genomics in the ecological arena Luisa Orsini...Dame, IN 46556, USA 4 The Center for Genomics and Bioinformatics, Indiana University...emerging model system in environmental genomics. Daphnia has been a model species in...

2011-01-01T23:59:59.000Z

169

Cellulases: ambiguous nonhomologous enzymes in a genomic perspective  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Cellulases: Cellulases: ambiguous nonhomologous enzymes in a genomic perspective Leonid O. Sukharnikov 1,2,4 , Brian J. Cantwell 1,4 , Mircea Podar 1,2,4 and Igor B. Zhulin 1,3,4,5 1 BioEnergy Science Center, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA 2 Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA 3 Computer Science and Mathematics Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA 4 Graduate School of Genome Science and Technology, University of Tennessee, Knoxville, TN 37996, USA 5 Department of Microbiology, University of Tennessee, Knoxville, TN 37996, USA The key material for bioethanol production is cellulose, which is one of the main components of the plant cell wall. Enzymatic depolymerization of cellulose is an essential step in bioethanol production, and can be accomplished by fungal and bacterial cellulases. Most

170

International milk genomics consortium  

E-Print Network [OSTI]

University, Wooster, OH 44691, USA c University of Idaho, Moscow, ID 83844, USA d University of Colorado. The general goals of the Milk Genomics Consortium are to link the scientific community through milk and geno value of milk's components is known (German, Dillard, & Ward, 2002). The scientific challenge, therefore

Rocke, David M.

171

BER Science Network Requirements  

SciTech Connect (OSTI)

The Energy Sciences Network (ESnet) is the primary provider of network connectivity for the US Department of Energy Office of Science, the single largest supporter of basic research in the physical sciences in the United States. In support of the Office of Science programs, ESnet regularly updates and refreshes its understanding of the networking requirements of the instruments, facilities, scientists, and science programs that it serves. This focus has helped ESnet to be a highly successful enabler of scientific discovery for over 20 years. In April 2010 ESnet and the Office of Biological and Environmental Research, of the DOE Office of Science, organized a workshop to characterize the networking requirements of the science programs funded by BER. The requirements identified at the workshop are summarized and described in more detail in the case studies and the Findings section. A number of common themes emerged from the case studies and workshop discussions. One is that BER science, like many other disciplines, is becoming more and more distributed and collaborative in nature. Another common theme is that data set sizes are exploding. Climate Science in particular is on the verge of needing to manage exabytes of data, and Genomics is on the verge of a huge paradigm shift in the number of sites with sequencers and the amount of sequencer data being generated.

Dart, Eli; Tierney, Brian

2010-11-01T23:59:59.000Z

172

DOE Joint Genome Institute: Establishing Standard Definitions for Genome  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

October 8, 2009 October 8, 2009 Establishing Standard Definitions for Genome Sequences Download a podcast of this release! WALNUT CREEK, CA-In 1996, researchers from major genome sequencing centers around the world convened on the island of Bermuda and defined a finished genome as a gapless sequence with a nucleotide error rate of one or less in 10,000 bases. This effectively set the quality target for the human genome effort and was quickly applied to other genome projects. If a genome sequence didn't meet this stringent criterion, it was simply considered a "draft." More than a decade later, researchers are finding that with the advent of the latest sequencing technologies the terms "draft" and "finished" are no longer sufficient to describe the varying levels of genome sequence

173

JGI - Intro to Genomics 1  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

An Introduction to Genomics: The Human Genome and Beyond An Introduction to Genomics: The Human Genome and Beyond 1 | 2 | 3 | 4 | Next>> What is genomics? THE HUMAN BODY consists of trillions of cells. Almost all contain an entire genome--the complete set of inherited genetic information encoded in our DNA. When humans reproduce, the parents' sperm and egg DNA combine to contribute a genome's worth of genetic information to the fertilized embryo. That same information is in each of the cells that eventually make up an organism. cell, DNA helix, and protein structure Some segments of DNA, called genes or "coding" DNA, contain the chemical recipe that determines particular traits; genetics is the study of the inheritance and function of these genes. Scientists now estimate that humans have about 30,000 genes, located along threadlike, tightly coiled

174

Navigating protected genomics data with UCSC Genome Browser in a Box.  

E-Print Network [OSTI]

H. et al. (2013) Integrative Genomics Viewer (IGV):High-performance genomics data visualization andbrowsers for comparative genomics. Bioinformatics. In press.

2014-01-01T23:59:59.000Z

175

Genomics Division Home  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

PIs PIs Mark Biggin Jim Bristow Jan-Fang Cheng Inna Dubchak Suzanna Lewis Chris Mungall Len Pennacchio Eddy Rubin Axel Visel Divisional Information Support Staff Seminars Diversity Directory Contact Us The characterization and analysis of genome sequences from such diverse organisms as humans to the most primitive soil microbe represent a watershed opportunity for biology. The Genomics Division is taking advantage of this wealth of new information. While it is well known that DNA encodes the basic blue print of life, it is not known how best to interpret most of this information. To address this question, laboratories within the division are developing computational, biochemical, genetic, and imaging methods to decipher the complex sequence motifs that control RNA transcription, DNA replication, and chromosome structure. The Division is

176

Whole Genome Sequencing of Thermus oshimai JL-2 and Thermus thermophilus JL-18, Incomplete Denitrifiers from the United  

E-Print Network [OSTI]

Pitluck,c Tanja Woyke,c Brian P. Hedlunda School of Life Sciences, University of Nevada Las Vegas, Las, Pitluck S, Woyke T, Hedlund BP. 2013. Whole genome sequencing of Thermus oshimai JL-2 and Thermus

Ahmad, Sajjad

177

Abstract A33: Exploring pediatric cancer genomics with the UCSC Cancer Genomics Browser  

Science Journals Connector (OSTI)

...October 2014 meeting-abstract Pediatric Cancer Genomics and Epigenomics Pediatric Cancer Genomics and Epigenomics: Poster Presentations - Proffered...Abstract A33: Exploring pediatric cancer genomics with the UCSC Cancer Genomics Browser Melissa...

Melissa Cline; Olena Morozova; Teresa Swatloski; Brian Craft; Mary Goldman; David Haussler; Jingchun Zhu

2014-10-15T23:59:59.000Z

178

POSTDOCTORAL POSITION IN BIOINFORMATICS AND EVOLUTIONARY GENOMICS: Next generation sequencing and analysis of complex polyploid genomes  

E-Print Network [OSTI]

POSTDOCTORAL POSITION IN BIOINFORMATICS AND EVOLUTIONARY GENOMICS: Next generation sequencing and analysis of complex polyploid genomes The research group Genome Evolution and Speciation (Team) to work on the analysis of genome and transcriptome sequence data (generated using 454 Roche

Rennes, Université de

179

GenomeCons: a web server for manipulating multiple genome sequence alignments and their consensus sequences  

Science Journals Connector (OSTI)

......December 2014 brief-report Applications Note GenomeCons: a web server for manipulating multiple genome sequence alignments and...molecular biological processes. In this study, we developed a web server, GenomeCons, for manipulating multiple genome sequence......

Tetsuya Sato; Mikita Suyama

2014-12-01T23:59:59.000Z

180

Rooted in Wonder: Joint Genome Institute Study Reveals Amazing World  

Broader source: Energy.gov (indexed) [DOE]

Rooted in Wonder: Joint Genome Institute Study Reveals Amazing Rooted in Wonder: Joint Genome Institute Study Reveals Amazing World Underfoot Rooted in Wonder: Joint Genome Institute Study Reveals Amazing World Underfoot August 13, 2012 - 2:33pm Addthis By developing a better understanding of the microbes that affect the growth of other plants (crops like corn or wheat) researchers may be able to improve their growth -- or provide better care for them in times of drought. By developing a better understanding of the microbes that affect the growth of other plants (crops like corn or wheat) researchers may be able to improve their growth -- or provide better care for them in times of drought. Charles Rousseaux Charles Rousseaux Senior Writer, Office of Science What Is A Weed It's also known as a mouse-ear cress. The scientific name is Arababidopsis thaliana.

Note: This page contains sample records for the topic "bssd genomic science" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


181

Original article Neisseria Base: a comparative genomics  

E-Print Network [OSTI]

Original article Neisseria Base: a comparative genomics database for Neisseria meningitidis Lee S, septicemia and in some cases pneumonia. Genomic studies hold great promise for N. meningitidis research genomics database and genome browser that houses and displays publicly available N. meningitidis genomes

Jordan, King

182

A Novel Approach for Comparative Genomics  

E-Print Network [OSTI]

A Novel Approach for Comparative Genomics & Annotation Transfer Alban MANCHERON Raluca URICARU Eric is genome comparison good for?" Genome comparison is crucial for genome annotation, regulatory motifs identification, and vaccine design aims at finding genomic regions either specific to or in one

Paris-Sud XI, Université de

183

Single Cell Whole Genome Amplification  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Single Cell Whole Genome Amplification Single Cell Whole Genome Amplification of Uncultivated Organisms Mircea Podar , Martin Keller , and Philip Hugenholtz (* ü ) Abstract Whole genome amplification of single cells is emerging as a powerful technique for accessing the genomes of individual members of microbial communi- ties without the complication of identifying the source of sequence data posed by shotgun sequencing of environmental samples (metagenomics). This method holds particular promise for the molecular unveiling of uncultivated organisms that com- prise the bulk of the microbial diversity and functionality on our planet. 1 Introduction Over the last two decades, it has become increasingly apparent that microbial diversity

184

Genomics: Encyclopaedia of humble DNA  

Science Journals Connector (OSTI)

... ENCODE Project Consortium shows through the analysis of 1% of the human genome that the humble, unpretentious non-gene sequences have essential regulatory roles (Fig. 1). ...

John M. Greally

2007-06-13T23:59:59.000Z

185

Evolutionary Genomics of Prokaryotic Viruses.  

E-Print Network [OSTI]

??Evolutionary history of biological entities is recorded within their nucleic acid sequences and can (sometimes) be deciphered by thorough genomic analysis. In this study we (more)

Krupovic, Mart

2010-01-01T23:59:59.000Z

186

Computational genomics on the grid.  

E-Print Network [OSTI]

??The post-genomic era is characterized by large amount of data available from sequencing projects. The large size of biological datasets, inherent complexity of biological problems (more)

Chen, Chunxi.

2008-01-01T23:59:59.000Z

187

GenomeView: a next-generation genome browser Thomas Abeel1,2,3,  

E-Print Network [OSTI]

GenomeView: a next-generation genome browser Thomas Abeel1,2,3, *, Thomas Van Parys1,2 , Yvan Saeys GenomeView, a stand-alone genome browser specifically designed to visualize and manipulate a multitude of genomics data. GenomeView enables users to dynamically browse high volumes of aligned short-read data

Gent, Universiteit

188

The human genome project  

SciTech Connect (OSTI)

The Human Genome Project will obtain high-resolution genetic and physical maps of each human chromosome and, somewhat later, of the complete nucleotide sequence of the deoxyribonucleic acid (DNA) in a human cell. The talk will begin with an extended introduction to explain the Project to nonbiologists and to show that map construction and sequence determination require extensive computation in order to determine the correct order of the mapped entities and to provide estimates of uncertainty. Computational analysis of the sequence data will become an increasingly important part of the project, and some computational challenges are described. 5 refs.

Bell, G.I.

1991-06-01T23:59:59.000Z

189

Ecology and Evolutionary Biology The Wiess School of Natural Sciences  

E-Print Network [OSTI]

Ecology and Evolutionary Biology The Wiess School of Natural Sciences Chair Evan Siemann Professors of Ecology and Evolutionary Biologyoffersabroadrangeofcoursesinthebiosciences:animalbehavior,animal biology, bioinformatics, conservation biology, diseases, ecology, evolutionary biology, field ecology, genetics, genomics

Richards-Kortum, Rebecca

190

Genome Majority Vote (GMV), Version 0.x  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Genome Majority Vote (GMV), Version 0.x Genome Majority Vote (GMV), Version 0.x The pipeline runs PRODIGAL gene predictions on all genomes, runs pan-reciprocal BLAST, and...

191

The function of genomes in bioenergetic organelles  

Science Journals Connector (OSTI)

...1998 The organelle genome database project (GOBASE). Nucleic...The mito- chondrial genome of Arabidopsis is composed...native and immigrant information. Trends Plant Sci...Microbial genes in the human genome: lateral transfer...

2003-01-01T23:59:59.000Z

192

Trichoderma: the genomics of opportunistic success  

E-Print Network [OSTI]

of a fungal prey. BMC Genomics 10, 567 (2009). This studythe TrichoEST functional genomics approach. Curr. Genet. 51,in Hypocrea jecorina. BMC Genomics. 9, 430 (2008) Mukherjee,

Druzhinina, Irina S.

2011-01-01T23:59:59.000Z

193

Cancer genomics and the TCGA project  

Science Journals Connector (OSTI)

...Research September 15, 2011 meeting-abstract Cancer Genomics Cancer Genomics: Poster Presentations - Proffered Abstracts Abstracts...San Francisco, CA Abstract A39: The UCSC Cancer Genomics Browser Brian Craft 1 Kyle Ellrott 1 Mary Goldman...

David Haussler

2010-10-01T23:59:59.000Z

194

From Integrative Genomics to Therapeutic Targets  

Science Journals Connector (OSTI)

...Research. 15 June 2013 review-article Reviews From Integrative Genomics to Therapeutic Targets Rachael Natrajan Paul Wilkerson Corresponding...conventional pathology with genomic profiling and functional genomics have begun to enhance our understanding of the genetic basis...

Rachael Natrajan and Paul Wilkerson

2013-06-15T23:59:59.000Z

195

Fast and sensitive multiple alignment of large genomic sequences  

E-Print Network [OSTI]

in Bioinformatics and Genome Research, Universitt Bielefeld, Postfach 100131, 33501 Bielefeld, Germany and 4University of Gttingen, Institute of Microbiology and Genetics, Goldschmidtstr. 1, 37077 Gttingen, Germany Email: Michael Brudno* - brudno... , Blankespoor CM, Wang ZE, Miller W, Rubin EM, Frazer KA: Identification of a coordinate regulator of interleukins 4, 13, and 5 by cross-species sequence comparisons. Science 2000, 288(5463):136-140. 14. Gttgens B, Barton LM, Gilbert JGR, Bench AJ, Sanchez MJ...

Brudno, Michael; Chapman, Michael A; Gottgens, Berthold; Batzoglou, Serafim; Morgenstern, Burkhard

2003-12-23T23:59:59.000Z

196

Photon Science  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Photon Science Along with its primary missions-global security, energy security, basic science, and national competitiveness-the NIF & Photon Science Directorate also pursues...

197

Science Engagement  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Science Engagement Science Engagement Move your data Programs & Workshops Science Requirements Reviews Case Studies Contact Us Technical Assistance: 1 800-33-ESnet (Inside US) 1...

198

Science Briefs  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Science Briefs newsroomassetsimagesnewsroom-icon.jpg Science Briefs Read in detail about specific Los Alamos science achievements, and the honors our scientists are accruing....

199

Detection Science  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Chemistry for Measurement and Detection Science Chemistry for Measurement and Detection Science Project Description Chemistry used in measurement and detection science plays a...

200

VIRAL EVOLUTION Genomic surveillance elucidates  

E-Print Network [OSTI]

VIRAL EVOLUTION Genomic surveillance elucidates Ebola virus origin and transmission during the 2014,12,13 � Robert F. Garry,8 � S. Humarr Khan,3 � Pardis C. Sabeti1,2 � In its largest outbreak, Ebola virus disease is spreading through Guinea, Liberia, Sierra Leone, and Nigeria. We sequenced 99 Ebola virus genomes from 78

Napp, Nils

Note: This page contains sample records for the topic "bssd genomic science" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


201

Fueling Future with Algal Genomics  

SciTech Connect (OSTI)

Algae constitute a major component of fundamental eukaryotic diversity, play profound roles in the carbon cycle, and are prominent candidates for biofuel production. The US Department of Energy Joint Genome Institute (JGI) is leading the world in algal genome sequencing (http://jgi.doe.gov/Algae) and contributes of the algal genome projects worldwide (GOLD database, 2012). The sequenced algal genomes offer catalogs of genes, networks, and pathways. The sequenced first of its kind genomes of a haptophyte E.huxleyii, chlorarachniophyte B.natans, and cryptophyte G.theta fill the gaps in the eukaryotic tree of life and carry unique genes and pathways as well as molecular fossils of secondary endosymbiosis. Natural adaptation to conditions critical for industrial production is encoded in algal genomes, for example, growth of A.anophagefferens at very high cell densities during the harmful algae blooms or a global distribution across diverse environments of E.huxleyii, able to live on sparse nutrients due to its expanded pan-genome. Communications and signaling pathways can be derived from simple symbiotic systems like lichens or complex marine algae metagenomes. Collectively these datasets derived from algal genomics contribute to building a comprehensive parts list essential for algal biofuel development.

Grigoriev, Igor

2012-07-05T23:59:59.000Z

202

PNNL: Biological Sciences: Fundamental and Computational Sciences  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

We perform Biological Systems Science research using prediction and We perform Biological Systems Science research using prediction and experimentation to understand the design of biological systems, translating the genome to functional capabilities for applications to energy, environment, and health. Microbial community research at PNNL is focusing on environment and energy processes, and rational design and development of new bioprocesses, while our health-related research is centering on how multicellular systems, tissues and organisms respond to disease and exposure to the environment. Dayle Smith PNNL and Collaborators Receive ARPA-E Award for Gas-to-Liquid Fuel Biocatalysis Congratulations to Pacific Northwest National Laboratory computational scientist Dr. Dayle Smith, who is part of a team that recently received a

203

Genome in a Bottle Consortium Work Plan  

E-Print Network [OSTI]

lines for whole genome RMs and design synthetic DNA constructs that could will be a set of well-characterized whole genome and synthetic DNA RMs along

204

C3Bio.org - Tags: Genomics  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

.jpeg, .jpe, .bmp, .tif, .tiff, .png, .gif) Submit You are here: Home Tags Genomics All Categories Tags: Genomics More tags Categories All Categories 2 Resources 2...

205

USDA-DOE Make Available $4 Million for Biomass Genomics Research | U.S. DOE  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

USDA-DOE Make USDA-DOE Make Available $4 Million for Biomass Genomics Research News Featured Articles Science Headlines 2014 2013 2012 2011 2010 2009 2008 2007 2006 2005 Presentations & Testimony News Archives Contact Information Office of Science U.S. Department of Energy 1000 Independence Ave., SW Washington, DC 20585 P: (202) 586-5430 10.12.06 USDA-DOE Make Available $4 Million for Biomass Genomics Research Print Text Size: A A A Subscribe FeedbackShare Page ST. LOUIS, MO - The U.S. Departments of Energy and Agriculture (DOE and USDA) today announced $4 million for bio-based fuels research that will accelerate the development of alternative fuels. The departments issued a solicitation for research proposals for new plant feedstock genomics research projects. Dr. Raymond L. Orbach, DOE Under Secretary for Science,

206

NREL: Energy Sciences - Materials Science  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Materials Science Hydrogen Technology & Fuel Cells Process Technology & Advanced Concepts Research Staff Computational Science Printable Version Materials Science Learn about our...

207

Draft Genome Sequence  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Draft Draft Genome Sequence of Serratia sp. Strain ATCC 39006, a Model Bacterium for Analysis of the Biosynthesis and Regulation of Prodigiosin, a Carbapenem, and Gas Vesicles Peter C. Fineran, a Marina C. Iglesias Cans, a Joshua P. Ramsay, b Nabil M. Wilf, b Desiree Cossyleon, a Matthew B. McNeil, a Neil R. Williamson, b Rita E. Monson, b S. Anette Becher, c Jo-Ann L. Stanton, d Kim Brügger, e Steven D. Brown, f George P. C. Salmond b Department of Microbiology and Immunology, University of Otago, Dunedin, New Zealand a ; Department of Biochemistry, University of Cambridge, Cambridge, United Kingdom b ; AgResearch Ltd., Invermay Agricultural Centre, Mosgiel, New Zealand c ; Department of Anatomy, University of Otago, Dunedin, New Zealand d ; EASIH, University of Cambridge, Addenbrooke's Hospital, Cambridge, United Kingdom e ; Biosciences Division, Oak Ridge National Laboratory, Oak Ridge,

208

Science Mathematics Engineering  

E-Print Network [OSTI]

Science Mathematics Engineering . ­ p.1 #12;Science Mathematics Engineering Science, Computer `Science', . ­ p.1 #12;Science Mathematics Engineering Science, Computer `Science', Mathematics, . ­ p.1 #12;Science Mathematics Engineering Science, Computer `Science', Mathematics, and Software Development

Hamlet, Richard

209

Capabilities Strategy: Science Pillars  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Innovation Capabilities Strategy: Science Pillars science-innovationassetsimagesicon-science.jpg Capabilities Strategy: Science Pillars The Lab's four Science Pillars...

210

Science Fairs for Science Literacy  

E-Print Network [OSTI]

is supported by a National Science Foundation PostdoctoralT. Culbertson is a middle school science and math teacher.for the Advancement of Science (AAAS) (1990), Science for

Mackey, Katherine; Culbertson, Timothy

2014-01-01T23:59:59.000Z

211

BIOLOGICAL SCIENCES Contemporary biological science  

E-Print Network [OSTI]

BIOLOGICAL SCIENCES Contemporary biological science covers a range of diverse and overlapping in cellular and molecular biology. Wichita State University's Department of Biological Sciences offers courses in most aspects of contemporary biological science. Our required core courses will expose you

212

Human genome. 1993 Program report  

SciTech Connect (OSTI)

The purpose of this report is to update the Human Genome 1991-92 Program Report and provide new information on the DOE genome program to researchers, program managers, other government agencies, and the interested public. This FY 1993 supplement includes abstracts of 60 new or renewed projects and listings of 112 continuing and 28 completed projects. These two reports, taken together, present the most complete published view of the DOE Human Genome Program through FY 1993. Research is progressing rapidly toward 15-year goals of mapping and sequencing the DNA of each of the 24 different human chromosomes.

Not Available

1994-03-01T23:59:59.000Z

213

Challenges in Whole-Genome Annotation of Pyrosequenced Eukaryotic Genomes  

SciTech Connect (OSTI)

Pyrosequencing technologies such as 454/Roche and Solexa/Illumina vastly lower the cost of nucleotide sequencing compared to the traditional Sanger method, and thus promise to greatly expand the number of sequenced eukaryotic genomes. However, the new technologies also bring new challenges such as shorter reads and new kinds and higher rates of sequencing errors, which complicate genome assembly and gene prediction. At JGI we are deploying 454 technology for the sequencing and assembly of ever-larger eukaryotic genomes. Here we describe our first whole-genome annotation of a purely 454-sequenced fungal genome that is larger than a yeast (>30 Mbp). The pezizomycotine (filamentous ascomycote) Aspergillus carbonarius belongs to the Aspergillus section Nigri species complex, members of which are significant as platforms for bioenergy and bioindustrial technology, as members of soil microbial communities and players in the global carbon cycle, and as agricultural toxigens. Application of a modified version of the standard JGI Annotation Pipeline has so far predicted ~;;10k genes. ~;;12percent of these preliminary annotations suffer a potential frameshift error, which is somewhat higher than the ~;;9percent rate in the Sanger-sequenced and conventionally assembled and annotated genome of fellow Aspergillus section Nigri member A. niger. Also,>90percent of A. niger genes have potential homologs in the A. carbonarius preliminary annotation. Weconclude, and with further annotation and comparative analysis expect to confirm, that 454 sequencing strategies provide a promising substrate for annotation of modestly sized eukaryotic genomes. We will also present results of annotation of a number of other pyrosequenced fungal genomes of bioenergy interest.

Kuo, Alan; Grigoriev, Igor

2009-04-17T23:59:59.000Z

214

The Science of Science Foundation  

Science Journals Connector (OSTI)

... THE 'science of ... of science' is an awkward name but, as it describes accurately what is meant, it ...

MAURICE GOLDSMITH

1965-01-02T23:59:59.000Z

215

Science in science fiction  

Science Journals Connector (OSTI)

Science fiction, from Star Trek to Star Wars, is hugely popular and pupils will surely have encountered good and bad physics there, but do they really notice? Discussing the science implied in books and movies, such as in the use of transporters, can be a good way of getting students interested in physics.

Jonathan Allday

2003-01-01T23:59:59.000Z

216

Assignment of Orthologous Genes via Genome Rearrangement  

E-Print Network [OSTI]

Assignment of Orthologous Genes via Genome Rearrangement Xin Chen, Jie Zheng, Zheng Fu, Peng Nan of genomes is a fundamental and challenging problem in comparative genomics. Existing methods that assign sequence similarity and evolutionary events at a genome level, where orthologous genes are assumed

Lonardi, Stefano

217

Shotgun coverage of human genome computing  

E-Print Network [OSTI]

take about 1.5 million pages. The Human Genome Project would not be possible if our revolution were-author collection of chapters on the various uses of computing in the Human Genome Project. Peculiarly absent fromShotgun coverage of human genome computing Human Genome Computing, Second Edition edited by Martin

Eddy, Sean

218

Course Information IB 364: Human Genome and  

E-Print Network [OSTI]

Course Information IB 364: Human Genome and Bioinformatics On this page: � Course Description � Technical Support Course Description Highlights advances in understanding the human genome, utilizing the human genome, applying bioinformatics to the genome, and realizing its potential to understand human

Kent, Angela

219

A Statistical Framework for Spatial Comparative Genomics  

E-Print Network [OSTI]

A Statistical Framework for Spatial Comparative Genomics Rose Hoberman May 2007 CMU-CS-07, or the U.S. Government. #12;Keywords: spatial comparative genomics, comparative genomics, gene clusters, max-gap clusters, gene teams, whole genome duplication, paralogons, synteny, ortholog detection #12

220

Genomics and ornithology Scott V. Edwards  

E-Print Network [OSTI]

REVIEW Genomics and ornithology Scott V. Edwards Received: 23 September 2007 / Accepted: 27 Genomics is revolutionizing ornithology in the same ways it is reinvigorating other biological disciplines. In this review, I will highlight applications of genomics and genomics technologies to the study of the ecology

Edwards, Scott

Note: This page contains sample records for the topic "bssd genomic science" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


221

Hindawi Publishing Corporation Comparative and Functional Genomics  

E-Print Network [OSTI]

Hindawi Publishing Corporation Comparative and Functional Genomics Volume 2007, Article ID 47304, 7 pages doi:10.1155/2007/47304 Meeting Report eGenomics: Cataloguing Our Complete Genome Collection III, Michigan State University, East Lansing, MI 48824, USA 3 The Institute for Genomic Research, 9712 Medical

Newcastle upon Tyne, University of

222

1 Biomedical Sciences BIOMEDICAL SCIENCES  

E-Print Network [OSTI]

1 Biomedical Sciences BIOMEDICAL SCIENCES The interdisciplinary doctoral programs in the biomedical sciences are organized within the Institute for Biomedical Sciences. The first full year of study toward are admitted directly into the Institute for Biomedical Sciences through Columbian College of Arts and Sciences

Vertes, Akos

223

Chapter 14: Genome Assembly and Annotation Process Annotation of other genomes  

E-Print Network [OSTI]

Chapter 14: Genome Assembly and Annotation Process Paul Kitts Summary Box 1 Annotation of other genomes NCBI may assemble a genome prior to annotation, add annotations to a genome assembled elsewhere, or simply process an annotated genome to produce RefSeqs and maps for display in Map Viewer (Chapter 20

Levin, Judith G.

224

The Genome Database Organism-centered listing of available genomic sequence records and projects  

E-Print Network [OSTI]

The Genome Database Organism-centered listing of available genomic sequence records and projects http://www.ncbi.nlm.nih.gov/genome National Center for Biotechnology Information · National Library | NCBI Genome | Last Update August 19, 2013 Contact: info@ncbi.nlm.nih.gov Scope Since 2011, the Genome

Levin, Judith G.

225

Growth Temperature and Genome Size in Bacteria Are Negatively Correlated, Suggesting Genomic Streamlining  

E-Print Network [OSTI]

Growth Temperature and Genome Size in Bacteria Are Negatively Correlated, Suggesting Genomic.wagner@ieu.uzh.ch; nsabath@gmail.com. Accepted: March 25, 2013 Abstract Prokaryotic genomes are small and compact. Either this feature is caused by neutral evolution or by natural selection favoring small genomes--genome streamlining

Wagner, Andreas

226

Extreme Genomics By Scouring the Genomes of 50 HIV-Resistant People, Study  

E-Print Network [OSTI]

Extreme Genomics By Scouring the Genomes of 50 HIV-Resistant People, Study Takes Aim at Rare Gene Genome Variation, and his colleagues think that the complete genome sequences of those fortunate few against the viral strain that usually infects humans. That's because the CCR5 protein is Extreme Genomics

Dolbow, John

227

JGI - 2009 Genome Sequencing Targets  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

July 2, 2008 July 2, 2008 Pine Tree, Boat-Boring Bivalve "Bugs", Duck Weed, Oil-Producing Microalgae, Stinkbird Gut, 40 Others Top DOE Joint Genome Institute 2009 Genome Sequencing Targets WALNUT CREEK, CA-In the continuing effort to tap the vast, unexplored reaches of the earth's microbial and plant domains for bioenergy and environmental applications, the DOE Joint Genome Institute (DOE JGI) has announced its latest portfolio of DNA sequencing projects that it will undertake in the coming year. The 44 projects, culled from nearly 150 proposals received through the Community Sequencing Program (CSP), represent over 60 billion nucleotides of data to be generated through this biodiversity sampling campaign-roughly the equivalent of 20 human genomes. "The scientific and technological advances enabled by the information

228

Mapping Our Genes: The Genome Projects: How Big, How Fast  

DOE R&D Accomplishments [OSTI]

For the past 2 years, scientific and technical journals in biology and medicine have extensively covered a debate about whether and how to determine the function and order of human genes on human chromosomes and when to determine the sequence of molecular building blocks that comprise DNA in those chromosomes. In 1987, these issues rose to become part of the public agenda. The debate involves science, technology, and politics. Congress is responsible for ?writing the rules? of what various federal agencies do and for funding their work. This report surveys the points made so far in the debate, focusing on those that most directly influence the policy options facing the US Congress. Congressional interest focused on how to assess the rationales for conducting human genome projects, how to fund human genome projects (at what level and through which mechanisms), how to coordinate the scientific and technical programs of the several federal agencies and private interests already supporting various genome projects, and how to strike a balance regarding the impact of genome projects on international scientific cooperation and international economic competition in biotechnology. The Office of Technology Assessment (OTA) prepared this report with the assistance of several hundred experts throughout the world.

1988-04-00T23:59:59.000Z

229

Abstract A33: Exploring pediatric cancer genomics with the UCSC Cancer Genomics Browser  

Science Journals Connector (OSTI)

...University of California, Santa Cruz, CA. The UCSC Cancer Genomics Browser (https://genome-cancer.ucsc.edu) is a set of web-based tools to display, investigate and analyze cancer genomics data and associated clinical data. Experimental quantities...

Melissa Cline; Olena Morozova; Teresa Swatloski; Brian Craft; Mary Goldman; David Haussler; Jingchun Zhu

2014-10-15T23:59:59.000Z

230

Is sustainability science really a science?  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Is sustainability science really a science? Is sustainability science really a science? The team's work shows that although sustainability science has been growing explosively...

231

Computer Science Computer Science?  

E-Print Network [OSTI]

. Data and Information: Meet the challenges of"big data"via information management and through database in electrical engineering and computer science MSAIL: Artificial intelligence group HKN: Eta Kappa Nu honor

Eustice, Ryan

232

USDA-DOE Make Available $4 Million for Biomass Genomics Research |  

Broader source: Energy.gov (indexed) [DOE]

USDA-DOE Make Available $4 Million for Biomass Genomics Research USDA-DOE Make Available $4 Million for Biomass Genomics Research USDA-DOE Make Available $4 Million for Biomass Genomics Research October 12, 2006 - 9:08am Addthis ST. LOUIS, MO -- The U.S. Departments of Energy and Agriculture (DOE and USDA) today announced $4 million for bio-based fuels research that will accelerate the development of alternative fuels. The departments issued a solicitation for research proposals for new plant feedstock genomics research projects. Dr. Raymond L. Orbach, DOE Under Secretary for Science, made the announcement at Advancing Renewable Energy: An American Rural Renaissance, a conference jointly hosted by the two agencies in St. Louis. "We are seeking to accelerate research breakthroughs that contribute towards making biofuels a cost-effective alternative to fossil fuels, with

233

JGI Visiting Scientist Program The DOE Joint Genome Institute Visiting Scientist Program (VSP)  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Visiting Scientist Program Visiting Scientist Program The DOE Joint Genome Institute Visiting Scientist Program (VSP) provides an opportunity for researchers who are seeking to build upon their line of scientific inquiry by leveraging JGI experimental, computational, and personnel resources for genomic research and sequence-based science. Projects include de novo generation of genome data, assistance in interpreting and/or building on an existing data set, or the refining of new technology (e.g., single-cell genomics; metagenomics, etc.). Length of stay depends on complexity of the project being considered and availability of data and other resources. Investigators, post docs, and graduate students participating in approved JGI User Projects are also invited to apply for on-site access to JGI

234

Development of stable lines of transgenic zebrafish (Danio rerio) to investigate genomic instability  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

stable lines of transgenic zebrafish (Danio rerio) to stable lines of transgenic zebrafish (Danio rerio) to investigate genomic instability Lahcen Jaafar 1 , Wendy W. Kuhne 2 , Xiayang Xie 3 , Xuan Zheng 1,4 , Jeffrey S. Mumm 3 , and William S. Dynan 1 1 Institute of Molecular Medicine and Genetics, Georgia Health Sciences University, Georgia 30912, USA, 2 Savannah River National Laboratory, Aiken SC 29808, 3 Department of Cellular Biology and Anatomy, Georgia Health Sciences University, Georgia 30912, USA, 4 Genetic Diagnosis Center, Zhongnan Hospital of Wuhan University, Wuhan, China The goal of our project is to investigate low-dose radiation induced-genomic instability. We describe the development of a whole-vertebrate model bearing a reporter transgene that is designed to indicate the presence of genome instability by somatic homologous

235

Energy Department Awards $92 Million for Genomics Research | U.S. DOE  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Energy Energy Department Awards $92 Million for Genomics Research News Featured Articles Science Headlines 2014 2013 2012 2011 2010 2009 2008 2007 2006 2005 Presentations & Testimony News Archives Contact Information Office of Science U.S. Department of Energy 1000 Independence Ave., SW Washington, DC 20585 P: (202) 586-5430 10.03.05 Energy Department Awards $92 Million for Genomics Research Print Text Size: A A A Subscribe FeedbackShare Page WASHINGTON, DC - The Department of Energy (DOE) today issued a comprehensive plan for a new generation of biology research that builds on genome project investments to help solve national energy and environmental challenges. Microbial enzymes could, for example, be used to improve the manufacture of ethanol from cellulose by replacing the inefficient and

236

Computer Science  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Computer Science Computer Science1354608000000Computer ScienceSome of these resources are LANL-only and will require Remote Access.NoQuestions? 667-5809library@lanl.gov Computer...

237

Information Science  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Information Science Information Science1354608000000Information ScienceSome of these resources are LANL-only and will require Remote Access.NoQuestions? 667-5809library@lanl.gov...

238

DOE Joint Genome Institute: Unraveling the Threads: Simplest cotton genome  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

December 19, 2012 December 19, 2012 Unraveling the Threads: Simplest cotton genome offers clues for fiber improvements From the stockings decorating mantles to the new outfits in display windows calling to shoppers, cotton is woven into the fabric of the holiday season. For bioenergy researchers, however, fiber composition matters more than color and texture as each cotton strand is composed of more than two dozen coils of cellulose, a target biomass for next-generation biofuels. In the December 20, 2012 edition of Nature, an international consortium of researchers from 31 institutions including a team from the U.S. Department of Energy Joint Genome Institute (DOE JGI) present a high-quality draft assembly of the simplest cotton (Gossypium raimondii) genome. Additionally,

239

DOE Joint Genome Institute Completes Soybean Genome- Data Released to  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Press Release: December 8, 2008 Press Release: December 8, 2008 DOE Joint Genome Institute Completes Soybean Genome- Data Released to Advance Biofuel, Food, & Feed Research WALNUT CREEK, CA- The U.S. Department of Energy Joint Genome Institute (DOE JGI) has released a complete draft assembly of the soybean (Glycine max) genetic code, making it widely available to the research community to advance new breeding strategies for one of the world's most valuable plant commodities. Soybean not only accounts for 70 percent of the world's edible protein, but also is an emerging feedstock for biodiesel production. Soybean is second only to corn as an agricultural commodity and is the leading U.S. agricultural export. DOE JGI's interest in sequencing the soybean centers on its use for biodiesel, a renewable, alternative fuel with the highest energy content of

240

Earth Sciences Environmental Earth Sciences,  

E-Print Network [OSTI]

94 Earth Sciences­ Environmental Earth Sciences, Geology Degree options MGeol (Single Honours Degrees) Earth Sciences BSc (Single Honours Degrees) Environmental Earth Sciences Geology BSc (Joint placement. * The Geology and Environmental Earth Sciences degrees are accredited by the Geological Society

Brierley, Andrew

Note: This page contains sample records for the topic "bssd genomic science" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


241

1 Political Science POLITICAL SCIENCE  

E-Print Network [OSTI]

1 Political Science POLITICAL SCIENCE With Capitol Hill nearby and the White House just blocks away, GW is the ideal place to study political science. Students in the program benefit from rigorous study and behavioral sciences discipline in the Columbian College of Arts and Sciences, the program examines politics

Vertes, Akos

242

1 Forensic Sciences FORENSIC SCIENCES  

E-Print Network [OSTI]

1 Forensic Sciences FORENSIC SCIENCES As part of the Columbian College of Arts and Sciences' natural, mathematical and biomedical sciences programs, the forensic sciences program provides an understanding of the integration of forensic disciplines with the investigation of criminal activity, along

Vertes, Akos

243

FORENSIC SCIENCE About Forensic Science  

E-Print Network [OSTI]

Fact Sheet FORENSIC SCIENCE About Forensic Science: The Forensic Science program at SJSU offers: The SJSU Forensic Science program delivers coursework and training to · Empowergraduatestobecomeagentsofchangetorecognize, document and report errors and injustices in the practice of forensic science and crime scene

Su, Xiao

244

DOE Joint Genome Institute: Breaking down cellulose without blasting  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

4, 2011 4, 2011 Breaking down cellulose without blasting lignin: "Dry rot" genome offers lessons for biofuel pretreatment WALNUT CREEK, Calif.-Feared by realtors and homeowners alike, dry rot due to the fungus Serpula lacrymans causes millions of dollars worth of damage to homes and buildings around the world. This brown rot fungus' capacity to break down the cellulose in wood led to its selection for sequencing by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI) in 2007, with the goal of identifying the enzymes involved in the degradation process and using the information to improve cellulosic biofuels production. Photo: A variant of Serpula lacrymans causes dry rot. (Dave Brown via Flickr/Creative Commons Attribution 2.0) As reported online July 14 in Science Express, an international team of

245

DOE Joint Genome Institute: DOE JGI Announces 2011 Community Sequencing  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

October 4, 2010 October 4, 2010 Bigger is Better: DOE JGI Announces 2011 Community Sequencing Program Portfolio The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has selected 35 new genomic sequencing projects for its 2011 Community Sequencing Program (CSP)-a targeted sampling of the planet's biodiversity-to be characterized for bioenergy and environmental applications. A sample of CSP 2011 projects *[see photo credits below] Supported by the Office of Biological and Environmental Research in the DOE Office of Science, the DOE JGI's Community Sequencing Program enables scientists from universities and national laboratories around the world to probe the hidden world of microbes and plants for innovative solutions to the nation's major challenges in energy, climate, and environment. This

246

Worldwide Human Relationships Inferred from Genome-Wide Patterns of Variation  

Science Journals Connector (OSTI)

...Genet. 3 , e90 ( 2007 ). 11 H. M. Cann et al., Science 296 , 261 ( 2002 ). 12 Human Genome Diversity Panel, http://shgc.stanford.edu/hgdp or ftp://ftp.cephb.fr/hgdp_supp1. 13 H. Tang et al., Genet. Epidemiol. 28 , 289 ( 2005...

Jun Z. Li; Devin M. Absher; Hua Tang; Audrey M. Southwick; Amanda M. Casto; Sohini Ramachandran; Howard M. Cann; Gregory S. Barsh; Marcus Feldman; Luigi L. Cavalli-Sforza; Richard M. Myers

2008-02-22T23:59:59.000Z

247

Science Organizations  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Organizations Science Organizations National security depends on science and technology. The United States relies on Los Alamos National Laboratory for the best of both. No place...

248

Fermilab | Science  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

feature photo feature photo feature photo feature photo feature photo Science Navbar Toggle About Quick Info Science History Organization Photo and Video Gallery Diversity...

249

Enhancer Identification through Comparative Genomics  

SciTech Connect (OSTI)

With the availability of genomic sequence from numerousvertebrates, a paradigm shift has occurred in the identification ofdistant-acting gene regulatory elements. In contrast to traditionalgene-centric studies in which investigators randomly scanned genomicfragments that flank genes of interest in functional assays, the modernapproach begins electronically with publicly available comparativesequence datasets that provide investigators with prioritized lists ofputative functional sequences based on their evolutionary conservation.However, although a large number of tools and resources are nowavailable, application of comparative genomic approaches remains far fromtrivial. In particular, it requires users to dynamically consider thespecies and methods for comparison depending on the specific biologicalquestion under investigation. While there is currently no single generalrule to this end, it is clear that when applied appropriately,comparative genomic approaches exponentially increase our power ingenerating biological hypotheses for subsequent experimentaltesting.

Visel, Axel; Bristow, James; Pennacchio, Len A.

2006-10-01T23:59:59.000Z

250

The Genomes and Metagenomes (GEM) Catalogue (first presentation) and The ISA-GCDML Workshop (second presentation) (GSC8 Meeting)  

ScienceCinema (OSTI)

The Genomic Standards Consortium was formed in September 2005. It is an international, open-membership working body which promotes standardization in the description of genomes and the exchange and integration of genomic data. The 2009 meeting was an activity of a five-year funding ''Research Coordination Network'' from the National Science Foundation and was organized held at the DOE Joint Genome Institute with organizational support provided by the JGI and by the University of California - San Diego. Dawn Field of the NERC Centre for Ecology & Hydrology briefly introduces the GEM Catalogue, followed by Susanna Sansone of the European Bioinformatics Institute who talks about the ISA-GCDML workshop at the Genomic Standards Consortium's 8th meeting at the DOE JGI in Walnut Creek, Calif. on Sept. 9, 2009.

Field, Dawn [NERC Centre for Ecology and Hydrology]; Sansone, Susanna [EBI

2011-04-29T23:59:59.000Z

251

Science | ORNL Neutron Sciences  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Neutron Science Neutron Science Neutron Scattering Science Neutrons are one of the fundamental particles that make up matter and have properties that make them ideal for certain types of research. In the universe, neutrons are abundant, making up more than half of all visible matter. Neutron scattering provides information about the positions, motions, and magnetic properties of solids. When a beam of neutrons is aimed at a sample, many neutrons will pass through the material. But some will interact directly with atomic nuclei and "bounce" away at an angle, like colliding balls in a game of pool. This behavior is called neutron diffraction, or neutron scattering. Using detectors, scientists can count scattered neutrons, measure their energies and the angles at which they scatter, and map their final position

252

Genomics, Intellectual Disability, and Autism  

Science Journals Connector (OSTI)

To the Editor: Mefford et al. (Feb. 23 issue) provide an excellent review of the genomic factors in autism but do not mention that the quantitative contribution of the enumerated genetic factors to the rates of autism is small, as compared with the contribution of nongenomic (i.e. environmental)... To the Editor: Mefford et al. (Feb. 23 issue)1 provide an excellent review of the genomic factors in autism but do not mention that the quantitative contribution of the enumerated genetic factors to the rates of autism is small, as compared with the ...

2012-06-07T23:59:59.000Z

253

Genomics, Health Care, and Society  

Science Journals Connector (OSTI)

To the Editor: Hudson, in her otherwise comprehensive review article on genomic medicine (Sept. 15 issue), did not mention the issue of reimbursement and the role of payers such as the Centers for Medicare and Medicaid Services. In my outpatient clinic, many patients decline testing for a BRCA... To the Editor: Hudson, in her otherwise comprehensive review article on genomic medicine (Sept. 15 issue),1 did not mention the issue of reimbursement and the role of payers such as the Centers for Medicare and Medicaid Services. In my outpatient clinic, ...

2011-12-15T23:59:59.000Z

254

; Evolution of genes and genomes on the Drosophila phylogeny  

E-Print Network [OSTI]

ARTICLES ; Evolution of genes and genomes on the Drosophila phylogeny Drosophila 12 Genomes Consortium* Comparative analysis of multiple genomes in a phylogenetic framework dramatically improves the precision and sensitivity of evolutionary inference, producing more robust results than single-genome

Kellis, Manolis

255

Kin selection, genomics and caste-antagonistic pleiotropy  

Science Journals Connector (OSTI)

...Special feature 1001 14 70 Kin selection, genomics and caste-antagonistic pleiotropy David...evolution of social behaviours. The genomics revolution now provides the opportunity...Outlook: kin selection and social insect genomics The revolution in social insect genomics...

2013-01-01T23:59:59.000Z

256

Genome and proteome annotation: organization, interpretation and integration  

Science Journals Connector (OSTI)

...In addition, the Human Genome Variation Society aims...of genomic variation information. With this in mind...variation within the human genome. The elucidation of...beginning of the 1000 genomes project (Siva 2008) aims to...

2009-01-01T23:59:59.000Z

257

Chlamydomonas reinhardtii at the Crossroads of Genomics  

Science Journals Connector (OSTI)

...55108 4 Department of Energy, Joint Genome Institute...with light as a sole energy source (photoautotrophic...production of clean, solar-generated energy in the form of H2, and...59). Ongoing genome projects offer the scientific...

Arthur R. Grossman; Elizabeth E. Harris; Charles Hauser; Paul A. Lefebvre; Diego Martinez; Dan Rokhsar; Jeff Shrager; Carolyn D. Silflow; David Stern; Olivier Vallon; Zhaoduo Zhang

2003-12-01T23:59:59.000Z

258

Strategies and tools for whole genome alignments  

SciTech Connect (OSTI)

The availability of the assembled mouse genome makespossible, for the first time, an alignment and comparison of two largevertebrate genomes. We have investigated different strategies ofalignment for the subsequent analysis of conservation of genomes that areeffective for different quality assemblies. These strategies were appliedto the comparison of the working draft of the human genome with the MouseGenome Sequencing Consortium assembly, as well as other intermediatemouse assemblies. Our methods are fast and the resulting alignmentsexhibit a high degree of sensitivity, covering more than 90 percent ofknown coding exons in the human genome. We have obtained such coveragewhile preserving specificity. With a view towards the end user, we havedeveloped a suite of tools and websites for automatically aligning, andsubsequently browsing and working with whole genome comparisons. Wedescribe the use of these tools to identify conserved non-coding regionsbetween the human and mouse genomes, some of which have not beenidentified by other methods.

Couronne, Olivier; Poliakov, Alexander; Bray, Nicolas; Ishkhanov,Tigran; Ryaboy, Dmitriy; Rubin, Edward; Pachter, Lior; Dubchak, Inna

2002-11-25T23:59:59.000Z

259

A Gene Map of the Human Genome  

Science Journals Connector (OSTI)

...sanger.ac.uk/ Stanford Human Genome Center http://www-shgc.stanford.edu/ Wellcome Trust Centre for Human...sanger.ac.ukl Stanford Human Genome Center http://www-shgc.stanford.edu/ Wellcome Trust Centre for Human Genetics http...

G. D. Schuler; M. S. Boguski; E. A. Stewart; L. D. Stein; G. Gyapay; K. Rice; R. E. White; P. Rodriguez-Tom; A. Aggarwal; E. Bajorek; S. Bentolila; B. B. Birren; A. Butler; A. B. Castle; N. Chiannilkulchai; A. Chu; C. Clee; S. Cowles; P. J. R. Day; T. Dibling; N. Drouot; I. Dunham; S. Duprat; C. East; C. Edwards; J.-B. Fan; N. Fang; C. Fizames; C. Garrett; L. Green; D. Hadley; M. Harris; P. Harrison; S. Brady; A. Hicks; E. Holloway; L. Hui; S. Hussain; C. Louis-Dit-Sully; J. Ma; A. MacGilvery; C. Mader; A. Maratukulam; T. C. Matise; K. B. McKusick; J. Morissette; A. Mungall; D. Muselet; H. C. Nusbaum; D. C. Page; A. Peck; S. Perkins; M. Piercy; F. Qin; J. Quackenbush; S. Ranby; T. Reif; S. Rozen; C. Sanders; X. She; J. Silva; D. K. Slonim; C. Soderlund; W.-L. Sun; P. Tabar; T. Thangarajah; N. Vega-Czarny; D. Vollrath; S. Voyticky; T. Wilmer; X. Wu; M. D. Adams; C. Auffray; N. A. R. Walter; R. Brandon; A. Dehejia; P. N. Goodfellow; R. Houlgatte; J. R. Hudson Jr.; S. E. Ide; K. R. Iorio; W. Y. Lee; N. Seki; T. Nagase; K. Ishikawa; N. Nomura; C. Phillips; M. H. Polymeropoulos; M. Sandusky; K. Schmitt; R. Berry; K. Swanson; R. Torres; J. C. Venter; J. M. Sikela; J. S. Beckmann; J. Weissenbach; R. M. Myers; D. R. Cox; M. R. James; D. Bentley; P. Deloukas; E. S. Lander; T. J. Hudson

1996-10-25T23:59:59.000Z

260

Unlocking the Secrets of the Genome  

E-Print Network [OSTI]

The primary objective of the Human Genome Project was to produce high-quality sequences not just for the human genome but also for those of the chief model organisms: Escherichia coli, yeast (Saccharomyces cerevisiae), ...

Celniker, Susan E.

Note: This page contains sample records for the topic "bssd genomic science" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


261

Comparative Sequencing of Plant Genomes: Choices to Make The first sequenced genome of a plant,  

E-Print Network [OSTI]

COMMENTARY Comparative Sequencing of Plant Genomes: Choices to Make The first sequenced genome of a plant, Arabidopsis thaliana, was published ,6 years ago (Arabidopsis Genome Initiative, 2000). Since that time, the complete rice genome (Oryza sativa; Goff et al., 2002; Yu et al., 2002; International Rice

Purugganan, Michael D.

262

A Possible Genome To Architecture Project (GenToA) [The Meta-Genome Project?  

E-Print Network [OSTI]

concern about the Human Genome project, comparing it with buying a book written in a language nobodyA Possible Genome To Architecture Project (GenToA) [The Meta-Genome Project?] Installed: 2 Aug 2010 can a genome specify an information-processing architecture that grows itself guided by interaction

Sloman, Aaron

263

Whole-genome shotgun assembly and comparison of human genome assemblies  

E-Print Network [OSTI]

Whole-genome shotgun assembly and comparison of human genome assemblies Sorin Istraila , Granger G a whole-genome shotgun assembly (called WGSA) of the human genome generated at Celera in 2001. The Celera. With the nearly complete human DNA sequence [National Center for Biotechnology Information (NCBI) Build 34] now

Shatkay, Hagit

264

From genome to proteome: developing expression clone resources for the human genome  

E-Print Network [OSTI]

From genome to proteome: developing expression clone resources for the human genome Gary Temple1 Mammalian Gene Collection, National Human Genome Research Institute and 2 National Center for Biotechnology human genome sequence, it has become possible and highly productive to compare the sequences of m

265

Population genomics20-02-2009 Antnio Rodrigues; Bruno Santos / 59 Population Genomics  

E-Print Network [OSTI]

Population genomics20-02-2009 António Rodrigues; Bruno Santos / 59 Population Genomics 1 António Rodrigues (PDBC 2008) Bruno Santos (PDBC 2008) #12;Population genomics20-02-2009 António Rodrigues; Bruno Santos / 59 Contents 2 2 1000 genome project 1 Motivation and Introduction New generation sequencing

Goldschmidt, Christina

266

Genome Sequence of the Pea Aphid Acyrthosiphon The International Aphid Genomics Consortium"  

E-Print Network [OSTI]

Genome Sequence of the Pea Aphid Acyrthosiphon pisum The International Aphid Genomics Consortium we present the 464 Mb draft genome assembly of the pea aphid Acyrthosiphon pisum. This first published whole genome sequence of a basal hemimetabolous insect provides an outgroup to the multiple

Paris-Sud XI, Université de

267

FCTO Projects and the Materials Genome Initiative  

Broader source: Energy.gov [DOE]

Download presentation slides from the DOE Fuel Cell Technologies Office webinar, Materials Genome Initiative, held on December 2, 2014.

268

GDB - Human Genome Database final report  

SciTech Connect (OSTI)

This is the DOE final report for the GDB, Human Genome Database, project at the Johns Hopkins University.

Talbot, C. Conover, Jr.

2002-01-08T23:59:59.000Z

269

Joint Genome Institute's Automation Approach and History  

E-Print Network [OSTI]

Joint Genome Institutes Automation Approach and Historythroughput environment; automation does not necessarilyissues Islands of Automation modular instruments with

Roberts, Simon

2006-01-01T23:59:59.000Z

270

DOE Joint Genome Institute 2008 Progress Report  

E-Print Network [OSTI]

Stanford Human Genome Center (SHGC) began collaborating withscientific goals, and the JGI SHGC kept pace, focusing on

Gilbert, David

2009-01-01T23:59:59.000Z

271

Building Science  

Broader source: Energy.gov (indexed) [DOE]

Science Science The "Enclosure" Joseph Lstiburek, Ph.D., P.Eng, ASHRAE Fellow www.buildingscience.com * Control heat flow * Control airflow * Control water vapor flow * Control rain * Control ground water * Control light and solar radiation * Control noise and vibrations * Control contaminants, environmental hazards and odors * Control insects, rodents and vermin * Control fire * Provide strength and rigidity * Be durable * Be aesthetically pleasing * Be economical Building Science Corporation Joseph Lstiburek 2 Water Control Layer Air Control Layer Vapor Control Layer Thermal Control Layer Building Science Corporation Joseph Lstiburek 3 Building Science Corporation Joseph Lstiburek 4 Building Science Corporation Joseph Lstiburek 5 Building Science Corporation

272

DATA QUALITY IN GENOME DATABASES (Research Paper)  

E-Print Network [OSTI]

DATA QUALITY IN GENOME DATABASES (Research Paper) Heiko Müller Humboldt University Berlin, Germany@dbis.informatik.hu-berlin.de Abstract: Genome databases store data about molecular biological entities such as genes, proteins, diseases is their importance in the process of drug discovery. Genome data is analyzed and interpreted to gain so-called leads

Weske, Mathias

273

Genome Biology 2005, 6:312 commentreviewsreportsdepositedresearchinteractionsinformationrefereedresearch  

E-Print Network [OSTI]

Genome Biology 2005, 6:312 commentreviewsreportsdepositedresearchinteractionsinformationrefereedresearch Meeting report Large-scale discovery and validation of functional elements in the human genome-mail: bbernst@fas.harvard.edu. Manolis Kellis. E-mail: manoli@mit.edu Published: 1 March 2005 Genome Biology

Kellis, Manolis

274

Genome Biology 2006, 7:320 commentreviewsreportsdepositedresearchinteractionsinformationrefereedresearch  

E-Print Network [OSTI]

Genome Biology 2006, 7:320 commentreviewsreportsdepositedresearchinteractionsinformationrefereedresearch Meeting report Mobile DNA: genomes under the influence Cédric Feschotte and Ellen J Pritham Feschotte. Email: cedric@uta.edu Published: 30 June 2006 Genome Biology 2006, 7:320 (doi:10.1186/gb-2006

Pritham, Ellen J.

275

Genome Biology 2004, 6:302 commentreviewsreportsdepositedresearchinteractionsinformationrefereedresearch  

E-Print Network [OSTI]

Genome Biology 2004, 6, Technologiepark 927, B-9052 Ghent, Belgium. E-mail: Yves.vandepeer@psb.ugent.be Published: 21 December 2004 Genome at http://genomebiology.com/2004/6/1/302 © 2004 BioMed Central Ltd A report on the Plant Genomics European

Gent, Universiteit

276

Inferring Ancestral Chloroplast Genomes with Inverted Repeat  

E-Print Network [OSTI]

Inferring Ancestral Chloroplast Genomes with Inverted Repeat Liying Cui # , Feng Yue + , Claude W 87131 Abstract--- Genome evolution is shaped not only by nucleotide substitutions, but also by structural changes including gene and genome duplications, inser­ tions/deletions and gene order

Tang, Jijun

277

Genome Biology 2007, 8:R34 commentreviewsreportsdepositedresearchrefereedresearchinteractionsinformation  

E-Print Network [OSTI]

Genome Biology 2007, 8:R34 analytics tool for genome assemblies Michael C Schatz*, Adam M Phillippy*, Ben Shneiderman and Steven L the original work is properly cited. Hawkeye: a visual analytics tool for genome assembliesHawkeye is a new

Shneiderman, Ben

278

Computational Approaches Towards Human Genome Annotation  

E-Print Network [OSTI]

Computational Approaches Towards Human Genome Annotation Mark Gerstein Molecular Biophysics of the human genome. My talk will be concerned with topics within this area, in particular annotating pseudogenes (protein fossils) in the genome. I will discuss a comprehensive pseudogene identification pipeline

Singh, Jaswinder Pal

279

Pairwise Comparison Between Genomic Sequences and  

E-Print Network [OSTI]

COM­ BAT is applied to comparative analysis between yeast genomes, and between the human genomePairwise Comparison Between Genomic Sequences and Optical­maps by Bing Sun A dissertation submitted a research problem and the need of persistence to accomplish a goal. He introduced the CAPO project to me

Mohri, Mehryar

280

Meeting report The changing face of genomics  

E-Print Network [OSTI]

this technology into studying transcriptional regulator binding in the human genome, with applicationsMeeting report The changing face of genomics Manolis Kellis Address: The Broad Institute AGBT / AMS meeting on Advances in Genome Biology & Technology Marco Island, Florida, USA, February 4

Kellis, Manolis

Note: This page contains sample records for the topic "bssd genomic science" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


281

Pairwise Comparison Between Genomic Sequences and  

E-Print Network [OSTI]

. In experiments COM- BAT is applied to comparative analysis between yeast genomes, and between the human genomePairwise Comparison Between Genomic Sequences and Optical-maps by Bing Sun A dissertation submitted a research problem and the need of persistence to accomplish a goal. He introduced the CAPO project to me

Mohri, Mehryar

282

Genomic Comparisons of Humans and Chimpanzees  

E-Print Network [OSTI]

Genomic Comparisons of Humans and Chimpanzees Ajit Varki1 and David L. Nelson2 1 Glycobiology to human evolution, development, and disease. Sequence differences from the human genome were confirmed in the sidebar Online Sources of Information Regarding the Chimpanzee Genome. At the outset, we also emphasize

283

Genomics-based drug discovery venture  

Science Journals Connector (OSTI)

Genomics-based drug discovery venture ... The Cambridge, Mass.-based company calls its DiscoverEase program "functional genomics"designed to isolate and rapidly determine not only genes but also the related functions of critical proteins. ... Other genomics programs sequence vast amounts of human genetic information. ...

ANN THAYER

1996-10-07T23:59:59.000Z

284

Genomics Rises To Drug Discovery Challenge  

Science Journals Connector (OSTI)

Genomics Rises To Drug Discovery Challenge ... Functional genomics and functional proteomics provide a set of powerful tools to help identify novel cellular targets ... With pharmaceutical companies and biotechnology firms always looking for ways to discover new medicines more quickly and more efficiently, they are increasingly turning to new genomics and proteomics technologies to speed things along. ...

STU BORMAN

1999-04-19T23:59:59.000Z

285

UNL Core for Applied Genomics and Ecology  

E-Print Network [OSTI]

UNL Core for Applied Genomics and Ecology Bioinformatics training Roche 454 GS-FLX Registration, Microbiomes, Variant Analysis, Whole Genomes, Transcriptomes Data Analysis and Statistics CAGE database and employer. University of Nebraska-Lincoln*Core for Applied Genomics and Ecology* 323 Filley Hall *Lincoln

Farritor, Shane

286

Bridging mycorrhizal genomics, metagenomics and forest ecology  

E-Print Network [OSTI]

Meetings Bridging mycorrhizal genomics, metagenomics and forest ecology 6th New Phytologist of easily cultured saprotrophic fungi (among the first three published genomes were the models Saccharomyces or biotechnological interest, genomics is now poised to rapidly permeate the fields of fungal ecology and evolution

Pringle, Anne

287

One day seminar: Genetics and Genomics of  

E-Print Network [OSTI]

SCHOOL OF MEDICINE One day seminar: Genetics and Genomics of Infectious Diseases Malaria and TB 14th June 2013 University of St Andrews - School of Medicine Pathogen genome research allows exquisite to understanding disease progression. Pathogen genome sequencing is accessible to most. Outputs have broad

Brierley, Andrew

288

Fraud strikes top genome lab  

SciTech Connect (OSTI)

Francis Collins, head of NIH`s Human Genome Project has informed colleagues that a junior researcher in his lab facke data in five papers co-authored by Collins. This article describes the whole scenario, how it was discovered, and what the reprocussions are.

Marshall, E.

1996-11-08T23:59:59.000Z

289

Nuclear Organization and Genome Function  

E-Print Network [OSTI]

Nuclear Organization and Genome Function Kevin Van Bortle and Victor G. Corces Department-range interactions and have proposed roles in nuclear organization. In this review, we explore recent findings for the roles of insulators in nuclear organization. 163 Annu.Rev.CellDev.Biol.2012.28:163-187.Downloadedfromwww

Corces, Victor G.

290

Political Science College of Arts and Sciences  

E-Print Network [OSTI]

Political Science College of Arts and Sciences Degree Options Bachelor of Arts in Political Science General Political Science Global Politics Political Science Pre-Law Minors Political Science Program Law Campaign worker Politics Marketing and sales Nonprofit administration Consultant Certification

Collins, Gary S.

291

[Faculty of Science Information and Computing Sciences  

E-Print Network [OSTI]

[Faculty of Science Information and Computing Sciences] Terminating combinator parsers in Agda and Computing Sciences Utrecht University June 12, 2008 #12;[Faculty of Science Information and Computing Sciences] 2 Overview Totality Parser combinators Terminating combinator parsers #12;[Faculty of Science

Löh, Andres

292

PNNL: Biological Sciences: Frontiers in Biological Sciences Seminar Series  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Frontiers in Biological Sciences Frontiers in Biological Sciences The seminar series features nationally/internationally known researchers from industry, government, and academia discussing novel ideas and advancements related to biological sciences. The hour-long seminars will feature a 45-minute talk by the featured speaker followed by 15 minutes of discussion with the audience members. 2014 Tim Donohue Timothy J. Donohue, Ph.D. Timothy J. Donohue, Ph.D. Department of Bacteriology University of Wisconsin-Madison Director, Great Lakes Bioenergy Research Center Tuesday, January 14, 2014 EMSL Auditorium 11:00 a.m. Biological Insights and Products Gleaned from Mining Bacterial Genomes and Pathways Professor Donohue has been a member of the UW-Madison Bacteriology Department since 1986. His research program studies bacterial energy

293

Faculty of Science Computer Science  

E-Print Network [OSTI]

Faculty of Science Computer Science Software engineering, network and system analysis continue a variety of computer science programs to prepare students for a career in the technology industry or in research and academia. A computer science degree provides an in-depth understanding of the fundamentals

294

Earth Sciences Environmental Earth Sciences,  

E-Print Network [OSTI]

84 Earth Sciences­ Environmental Earth Sciences, Geology MGeol (Single Honours Degrees) Earth Sciences BSc (Single Honours Degrees) Environmental Earth Sciences Geology BSc (Joint Honours Degrees) and among the most research-intensive in Europe. Features * The Department of Earth and Environmental

Brierley, Andrew

295

Security Science & Technology | Nuclear Science | ORNL  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Research Areas Fuel Cycle Science & Technology Fusion Nuclear Science Isotope Development and Production Nuclear Security Science & Technology Border Security Comprehensive...

296

The ecoresponsive genome of Daphnia pulex  

SciTech Connect (OSTI)

This document provides supporting material related to the sequencing of the ecoresponsive genome of Daphnia pulex. This material includes information on materials and methods and supporting text, as well as supplemental figures, tables, and references. The coverage of materials and methods addresses genome sequence, assembly, and mapping to chromosomes, gene inventory, attributes of a compact genome, the origin and preservation of Daphnia pulex genes, implications of Daphnia's genome structure, evolutionary diversification of duplicated genes, functional significance of expanded gene families, and ecoresponsive genes. Supporting text covers chromosome studies, gene homology among Daphnia genomes, micro-RNA and transposable elements and the 46 Daphnia pulex opsins. 36 figures, 50 tables, 183 references.

Colbourne, John K.; Pfrender, Michael E.; Gilbert, Donald; Thomas, W. Kelley; Tucker, Abraham; Oakley, Todd H.; Tokishita, Shinichi; Aerts, Andrea; Arnold, Georg J.; Basu, Malay Kumar; Bauer, Darren J.; Caceres, Carla E.; Carmel, Liran; Casola, Claudio; Choi, Jeong-Hyeon; Detter, John C.; Dong, Qunfeng; Dusheyko, Serge; Eads, Brian D.; Frohlich, Thomas; Geiler-Samerotte, Kerry A.; Gerlach, Daniel; Hatcher, Phil; Jogdeo, Sanjuro; Krijgsveld, Jeroen; Kriventseva, Evgenia V; Kltz, Dietmar; Laforsch, Christian; Lindquist, Erika; Lopez, Jacqueline; Manak, Robert; Muller, Jean; Pangilinan, Jasmyn; Patwardhan, Rupali P.; Pitluck, Samuel; Pritham, Ellen J.; Rechtsteiner, Andreas; Rho, Mina; Rogozin, Igor B.; Sakarya, Onur; Salamov, Asaf; Schaack, Sarah; Shapiro, Harris; Shiga, Yasuhiro; Skalitzky, Courtney; Smith, Zachary; Souvorov, Alexander; Sung, Way; Tang, Zuojian; Tsuchiya, Dai; Tu, Hank; Vos, Harmjan; Wang, Mei; Wolf, Yuri I.; Yamagata, Hideo; Yamada, Takuji; Ye, Yuzhen; Shaw, Joseph R.; Andrews, Justen; Crease, Teresa J.; Tang, Haixu; Lucas, Susan M.; Robertson, Hugh M.; Bork, Peer; Koonin, Eugene V.; Zdobnov, Evgeny M.; Grigoriev, Igor V.; Lynch, Michael; Boore, Jeffrey L.

2011-02-04T23:59:59.000Z

297

Los Alamos National Laboratory: Bioscience Division: Genome Science...  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Chris Detter Deputy Group Leader Joe Fawcett Group Office Administrator Ruby Archuleta Group Office 505 667 3912 B Div People B-6 is Home to the LANL Component of the DOE Joint...

298

Science Projects  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Argonne Argonne Science Project Ideas! Our Science Project section provides you with sample classroom projects and experiments, online aids for learning about science, as well as ideas for Science Fair Projects. Please select any project below to continue. Also, if you have an idea for a great project or experiment that we could share, please click our Ideas page. We would love to hear from you! Science Fair Ideas Science Fair Ideas! The best ideas for science projects are learning about and investigating something in science that interests you. NEWTON has a list of Science Fair linkd that can help you find the right topic. Toothpick Bridge Web Sites Toothpick Bridge Sites! Building a toothpick bridge is a great class project for physics and engineering students. Here are some sites that we recommend to get you started!

299

Science DMZ for ALS  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

ALS Science Engagement Move your data Programs & Workshops Science Requirements Reviews Case Studies OSCARS Case Studies Science DMZ Case Studies Science DMZ @ UF Science DMZ @ CU...

300

Science DMZ Case Studies  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Studies Science Engagement Move your data Programs & Workshops Science Requirements Reviews Case Studies OSCARS Case Studies Science DMZ Case Studies Science DMZ @ UF Science DMZ @...

Note: This page contains sample records for the topic "bssd genomic science" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


301

NERSC Science Gateways  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

QCD, Materials Science, Science Gateways About Science Gateways A science gateway is a web based interface to access HPC computers and storage systems. Gateways allow science...

302

10.1101/gr.133330.111Access the most recent version at doi: published online March 27, 2012Genome Res.  

E-Print Network [OSTI]

Kingdom; 5 Department of Biology, Institute of Molecular Systems Biology, ETH Zurich, 8093 Zurich, Switzerland; 6 Functional Genomics Center, ETH and University of Zurich, 8057 Zurich, Switzerland; 7 Laval of Science, University of Zurich, 8057 Zurich, Switzerland; 10 Institute of Pharmaceutical Sciences, ETH

Miska, Eric

303

DOE Joint Genome Institute: Genome of Simplest Animal Reveals Ancient  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

21, 2008 21, 2008 Genome of Simplest Animal Reveals Ancient Lineage, Confounding Array of Complex Capabilities WALNUT CREEK, CA-As Aesop said, appearances are deceiving-even in life's tiniest critters. From first detection in the 1880s, clinging to the sides of an aquarium, to its recent characterization by the U.S. Department of Energy Joint Genome Institute (DOE JGI), a simple and primitive animal, Trichoplax adhaerens, appears to harbor a far more complex suite of capabilities than meets the eye. The findings, reported in the August 21 online edition of the journal Nature, establish a group of organisms as a branching point of animal evolution and identify sets of genes, or a "parts list," employed by organisms that have evolved along particular branches.

304

Insights from Human/Mouse genome comparisons  

SciTech Connect (OSTI)

Large-scale public genomic sequencing efforts have provided a wealth of vertebrate sequence data poised to provide insights into mammalian biology. These include deep genomic sequence coverage of human, mouse, rat, zebrafish, and two pufferfish (Fugu rubripes and Tetraodon nigroviridis) (Aparicio et al. 2002; Lander et al. 2001; Venter et al. 2001; Waterston et al. 2002). In addition, a high-priority has been placed on determining the genomic sequence of chimpanzee, dog, cow, frog, and chicken (Boguski 2002). While only recently available, whole genome sequence data have provided the unique opportunity to globally compare complete genome contents. Furthermore, the shared evolutionary ancestry of vertebrate species has allowed the development of comparative genomic approaches to identify ancient conserved sequences with functionality. Accordingly, this review focuses on the initial comparison of available mammalian genomes and describes various insights derived from such analysis.

Pennacchio, Len A.

2003-03-30T23:59:59.000Z

305

Studies on the integration pattern of FBDV genome in host cell DNA  

E-Print Network [OSTI]

STUDIES ON THE INTEGRATION PATTERN OF FBDV GENOME IN HOST CELL DNA A Thesis by MIRZA AMANATULLA BAIG Submitted to the Office of Graduate Studies of Texas A&M University in partial fulfillment of the requirements for the degree of MASTER... OF SCIENCE May 1992 Major Subject: Veterinary Microbiology STUDIES ON THE INTEGRATION PA~ OF FBDV GENOME IN HOST CELL DNA A Thesis by MIRZA AMANATULLA BAIG Approved as to style and content by: David L. Grah m (Chair of Commi tee) Maurice C. mp...

Baig, Mirza Amanatulla

1992-01-01T23:59:59.000Z

306

Materials Science  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Materials Science Materials Science Materials Science1354608000000Materials ScienceSome of these resources are LANL-only and will require Remote Access./No/Questions? 667-5809library@lanl.gov Materials Science Some of these resources are LANL-only and will require Remote Access. Key Resources Data Sources Reference Organizations Journals Key Resources CINDAS Materials Property Databases video icon Thermophysical Properties of Matter Database (TPMD) Aerospace Structural Metals Database (ASMD) Damage Tolerant Design Handbook (DTDH) Microelectronics Packaging Materials Database (MPMD) Structural Alloys Handbook (SAH) Proquest Technology Collection Includes the Materials Science collection MRS Online Proceedings Library Papers presented at meetings of the Materials Research Society Data Sources

307

About | U.S. DOE Office of Science (SC)  

Office of Science (SC) Website

About About Biological and Environmental Research (BER) BER Home About Staff Organization Chart .pdf file (172KB) BER Budget BER Committees of Visitors Directions Jobs Research Facilities Science Highlights Benefits of BER Funding Opportunities Biological & Environmental Research Advisory Committee (BERAC) News & Resources Contact Information Biological and Environmental Research U.S. Department of Energy SC-23/Germantown Building 1000 Independence Ave., SW Washington, DC 20585 P: (301) 903-3251 F: (301) 903-5051 E: sc.ber@science.doe.gov More Information » About Print Text Size: A A A RSS Feeds FeedbackShare Page BER's scientific impact has been transformative. In 1986, the Human Genome Project gave birth to modern biotechnology and genomics-based systems biology. Today, with its Genomic Sciences Program and the DOE Joint

308

EMSL: Science  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

EMSL's Science and Science Themes EMSL's Science and Science Themes EMSL's unique and state-of-the-art capabilities along with staff expertise can help scientists gain a predictive understanding of the molecular-to-mesoscale processes in climate, biological, environmental and energy systems. These advancements are critical to development of sustainable solutions to the nation's energy and environmental challenges. Four Science Themes help EMSL define and direct the research investments and establish a portfolio of user projects to accelerate scientific innovation and discovery in the areas of environmental molecular science critical to DOE and the nation. EMSL's annual call for proposals solicits proposals on specific topics within these Science Themes. Over the next 10 years, EMSL will focus its science toward developing

309

Nuclear Sciences | More Science | ORNL  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Chemistry Chemistry Advanced Materials Nuclear Forensics Climate & Environment Biology and Soft Matter Chemical and Engineering Materials Quantum Condensed Matter Computational Chemistry Nuclear Sciences More Science Home | Science & Discovery | More Science | Chemistry | Nuclear Sciences SHARE Nuclear Sciences In World War II's Manhattan Project, ORNL helped usher in the nuclear age. Today, laboratory scientists are leaders in using nuclear technologies and systems to improve human health; explore safer, more environmentally friendly power; and better understand the structure of matter. Thanks to its nuclear heritage, ORNL is a world leader in the production of isotopes for medical purposes and research. The lab's High Flux Isotope Reactor (HFIR) and Radiochemical Engineering Development Center (REDC)

310

NREL: Energy Sciences - Larry Taylor  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Larry Taylor Larry Taylor Research Scientist Phone: (303) 384-7784 Email: larry.taylor@nrel.gov At NREL Since: 2007 Larry Taylor received his Ph.D. in Environmental Molecular Biology and Biotechnology from the Marine and Estuarine Environmental Sciences department at the University of Maryland, College Park. His dissertation work focused on the functional genomics of the plant cell wall degrading enzyme systems of the marine bacterium Saccharophagus degradans 2-40, which was isolated from decaying salt marsh grass the Chesapeake Bay watershed in 1988. Preliminary genomic analyses revealed that the S. degradans encodes more than 180 predicted carbohydrases. Under the direction of Prof. Ronald M. Weiner, and in collaboration with Dr. Bernard Henrisaat, Dr. Taylor identified the predicted cellulase system of S. degradans through sequence

311

Big Science  

ScienceCinema (OSTI)

Big science seeks big solutions for the most urgent problems of our times. Video courtesy Cray, Inc.

Dr. Thomas Zacharia

2010-01-08T23:59:59.000Z

312

Science stakes  

Science Journals Connector (OSTI)

... central part of British science. Michael Faraday dazzled crowds there in the nineteenth century with pyrotechnic displays of chemistry. ...

2013-01-22T23:59:59.000Z

313

ComputationalComputational ScienceScience  

E-Print Network [OSTI]

ComputationalComputational ScienceScience KenKen HawickHawick k.a.k.a.hawickhawick@massey.ac.nz@massey.ac.nz Massey UniversityMassey University #12;Computational Science / eScienceComputational Science / eScience Computational Science concerns the application of computer science to physics, mathematics, chemistry, biology

Hawick, Ken

314

Cassava Genomics: can genomic technology benefit smallholder farmers in Africa? (2014 DOE JGI Genomics of Energy & Environment Meeting)  

SciTech Connect (OSTI)

Steve Rounsley of the University of Arizona speaks at the 9th Annual Genomics of Energy & Environment Meeting on March 20, 2014 in Walnut Creek, Calif.

Rounsley, Steve [University of Arizona

2014-03-20T23:59:59.000Z

315

History of the DOE Human Genome Program  

Office of Scientific and Technical Information (OSTI)

History of the DOE Human Genome Program History of the DOE Human Genome Program The following history is taken from the U.S. Department of Energy 1991-91 Human Genome Program Report (June 1992). This is an archived item. A brief history of the U.S. Department of Energy (DOE) Human Genome Program will be useful in a discussion of the objectives of the DOE program as well as those of the collaborative U.S. Human Genome Project. The Office of Health and Environmental Research (OHER) of DOE and its predecessor agencies--the Atomic Energy Commission and the Energy Research and Development Administration--have long sponsored research into genetics, both in microbial systems and in mammals, including basic studies on genome structure, replication, damage, and repair and the consequences of genetic

316

PLAZA: A Comparative Genomics Resource to Study Gene and Genome Evolution in Plants  

Science Journals Connector (OSTI)

...requires a centralized plant genomics infrastructure where all information generated by different...Vandepoele and Van de Peer, 2005) are hybrid systems integrating gene information...this genome information, a centralized infrastructure is required where all data generated...

Sebastian Proost; Michiel Van Bel; Lieven Sterck; Kenny Billiau; Thomas Van Parys; Yves Van de Peer; Klaas Vandepoele

2009-12-29T23:59:59.000Z

317

Human-mouse comparative genomics: successes and failures to reveal functional regions of the human genome  

SciTech Connect (OSTI)

Deciphering the genetic code embedded within the human genome remains a significant challenge despite the human genome consortium's recent success at defining its linear sequence (Lander et al. 2001; Venter et al. 2001). While useful strategies exist to identify a large percentage of protein encoding regions, efforts to accurately define functional sequences in the remaining {approx}97 percent of the genome lag. Our primary interest has been to utilize the evolutionary relationship and the universal nature of genomic sequence information in vertebrates to reveal functional elements in the human genome. This has been achieved through the combined use of vertebrate comparative genomics to pinpoint highly conserved sequences as candidates for biological activity and transgenic mouse studies to address the functionality of defined human DNA fragments. Accordingly, we describe strategies and insights into functional sequences in the human genome through the use of comparative genomics coupled wit h functional studies in the mouse.

Pennacchio, Len A.; Baroukh, Nadine; Rubin, Edward M.

2003-05-15T23:59:59.000Z

318

Genomes as geography: using GIS technology to build interactive genome feature maps  

Science Journals Connector (OSTI)

Many commonly used genome browsers display sequence annotations and related attributes as horizontal data tracks that can be toggled on and off according to user preferences. Most genome browsers use only simple ...

Mary E Dolan; Constance C Holden; M Kate Beard; Carol J Bult

2006-09-01T23:59:59.000Z

319

Initial sequencing and comparative analysis of the mouse genome  

E-Print Network [OSTI]

Initial sequencing and comparative analysis of the mouse genome Mouse Genome Sequencing Consortium ........................................................................................................................................................................................................................... The sequence of the mouse genome is a key informational tool for understanding the contents of the human genome collaboration to produce a high-quality draft sequence of the mouse genome. We also present an initial

Eddy, Sean

320

Comparative genomics of the core and accessory genomes of 48 Sinorhizobium strains comprising five genospecies  

Science Journals Connector (OSTI)

Sequencing the genomes of 48 strains of Sinorhizobium reveals a large heterogeneity in strategies for colonization in this family

Masayuki Sugawara; Brendan Epstein; Brian D Badgley; Tatsuya Unno; Lei Xu; Jennifer Reese; Prasad Gyaneshwar; Roxanne Denny; Joann Mudge; Arvind K Bharti; Andrew D Farmer; Gregory D May; Jimmy E Woodward; Claudine Mdigue; David Vallenet; Aurlie Lajus; Zo Rouy; Betsy Martinez-Vaz; Peter Tiffin; Nevin D Young; Michael J Sadowsky

2013-02-20T23:59:59.000Z

Note: This page contains sample records for the topic "bssd genomic science" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


321

Generalized genetical genomics : advanced methods and applications.  

E-Print Network [OSTI]

??Generalized genetical genomics (GGG) is a systems genetics approach that combines the analysis of genetic variation with population-wide assessment of variation in molecular traits in (more)

Li, Yang

2010-01-01T23:59:59.000Z

322

Update on the Maize Genome Sequencing Project The Maize Genome Sequencing Project  

E-Print Network [OSTI]

Update on the Maize Genome Sequencing Project The Maize Genome Sequencing Project Vicki L. Chandler Genome Sequencing Project. The momentum for this endeavor has been building within the maize (Zea mays- sion. This Update reviews the project goals and the expected deliverables deriving from the two funded

Brendel, Volker

323

Earth and Atmospheric Sciences | More Science | ORNL  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Nuclear Forensics Climate & Environment Sensors and Measurements Chemical & Engineering Materials Computational Earth Science Systems Modeling Geographic Information Science and Technology Materials Science and Engineering Mathematics Physics More Science Home | Science & Discovery | More Science | Earth and Atmospheric Sciences SHARE Earth and Atmospheric Sciences At ORNL, we combine our capabilities in atmospheric science, computational science, and biological and environmental systems science to focus in the cross-disciplinary field of climate change science. We use computer models to improve climate change predications and to measure the impact of global warming on the cycling of chemicals in earth systems. Our Climate Change Science Institute uses models to explore connections among atmosphere,

324

Biological and Environmental Research (BER) Homepage | U.S. DOE Office of  

Office of Science (SC) Website

BER Home BER Home Biological and Environmental Research (BER) BER Home About Research Facilities Science Highlights Benefits of BER Funding Opportunities Biological & Environmental Research Advisory Committee (BERAC) News & Resources Contact Information Biological and Environmental Research U.S. Department of Energy SC-23/Germantown Building 1000 Independence Ave., SW Washington, DC 20585 P: (301) 903-3251 F: (301) 903-5051 E: sc.ber@science.doe.gov More Information » BER Accomplishments BSSD / CESD Timeline Take an interactive look at a century of scientific accomplishments in BER's Climate and Environmental Sciences / Biological Systems Science DivisionsRead More BER Interactive Accomplishments Timeline Understanding Complex Biological and Environmental Systems

325

Scientists Launch the Genomic Encyclopedia of Bacteria and Archaea | U.S.  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Scientists Scientists Launch the Genomic Encyclopedia of Bacteria and Archaea News Featured Articles 2014 2013 2012 2011 2010 2009 2008 2007 2006 2005 Science Headlines Presentations & Testimony News Archives Contact Information Office of Science U.S. Department of Energy 1000 Independence Ave., SW Washington, DC 20585 P: (202) 586-5430 12.28.09 Scientists Launch the Genomic Encyclopedia of Bacteria and Archaea Unlocking the diversity of microbial communities may benefit biofuel production, global carbon storage, and bioremediation. Print Text Size: A A A Subscribe FeedbackShare Page Scientists estimate that there are approximately 4 × 10^30 microbes living on the planet. To put this number into perspective, there are 4,000,000,000,000,000,000,000,000,000,000 microbes living on the planet

326

Chemistry | More Science | ORNL  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Soft Matter Chemical and Engineering Materials Quantum Condensed Matter Computational Chemistry Nuclear Sciences Engineering Computer Science Earth and Atmospheric Sciences...

327

Exploring the early origins of the synapse by comparative genomics  

Science Journals Connector (OSTI)

...origins of the synapse by comparative genomics Kenneth S Kosik * * ( kosik@lifesci...the existing core genes. A comparative genomics approach to one cellular machine-the...validation of these views. A comparative genomics approach to the entire cellulome may...

2009-01-01T23:59:59.000Z

328

Bioadhesion in ascidians: a developmental and functional genomics perspective  

Science Journals Connector (OSTI)

...ascidians: a developmental and functional genomics perspective Roberta Pennati 1 Ute Rothbacher...knowledge from a developmental and functional genomics point of view can advance our understanding...bioadhesion|ascidians|papillae|functional genomics|gene networks| 1. Introduction The...

2015-01-01T23:59:59.000Z

329

Deciphering the Diploid Ancestral Genome of the Mesohexaploid Brassica rapa  

Science Journals Connector (OSTI)

...recognized within the Brassicaceae family (Figure 1A). Within lineage...Mummenhoff, K. (2011). Cabbage family affairs: The evolutionary...genomics in the Brassicaceae: Building blocks of crucifer genomes...many other plant species by multi-genome comparison. Additionally...

Feng Cheng; Terezie Mandáková; Jian Wu; Qi Xie; Martin A. Lysak; Xiaowu Wang

2013-05-07T23:59:59.000Z

330

Diversity and genomics of Antarctic marine micro-organisms  

Science Journals Connector (OSTI)

...Clarke and N. Johnston Diversity and genomics of Antarctic marine micro-organisms...larger scale. Insights from initial genomics studies on both cultivated organisms...marine bacteria|marine microbial genomics|bacterioplankton diversity|Southern...

2007-01-01T23:59:59.000Z

331

ORIGINAL ARTICLE Comparative genomics of two newly isolated  

E-Print Network [OSTI]

ORIGINAL ARTICLE Comparative genomics of two newly isolated Dehalococcoides strains of Microbiology, Cornell University, Ithaca, NY, USA Comparative genomics of Dehalococcoides strains and an enrichment were performed using a microarray targeting genes from all available sequenced genomes

Alvarez-Cohen, Lisa

332

Forensic Genomics: Kin Privacy, Driftnets and Other Open Questions  

E-Print Network [OSTI]

, Human Genome Project, Cold and hot hits, Data protection, Informational privacy. 1. INTRODUCTIONForensic Genomics: Kin Privacy, Driftnets and Other Open Questions Frank Stajano University sequencing the entire genome of a person becomes sufficiently cheap as to become a routine operation

Cambridge, University of

333

The Evolution of the Anopheles 16 Genomes Project  

E-Print Network [OSTI]

We report the imminent completion of a set of reference genome assemblies for 16 species of Anopheles mosquitoes. In addition to providing a generally useful resource for comparative genomic analyses, these genome sequences ...

Waterhouse, Robert

334

Abstract SY36-01: Functional genomics and cancer dependencies  

Science Journals Connector (OSTI)

...CA Abstract SY36-01: Functional genomics and cancer dependencies William C. Hahn...Institute, Boston, MA. Recent advances in genomics continue to elucidate the genetic lesions...Format: William C. Hahn. Functional genomics and cancer dependencies. [abstract...

William C. Hahn

2014-10-01T23:59:59.000Z

335

Abstract LB-317: Interactive pipeline for reproducible genomics analyses  

Science Journals Connector (OSTI)

...Interactive pipeline for reproducible genomics analyses Michael Considine 1 Hilary S...Jersey, Ewing Township, NJ. Automated Genomics Analysis (AGA) is a program to analyze...to interactively perform reproducible genomics analysis using clinical covariates in...

Michael Considine; Hilary S. Parker; Yingying Wei; Xiao X. Xia; Leslie Cope; Michael F. Ochs; Elana J. Fertig

2014-10-01T23:59:59.000Z

336

Abstract IA14: Functional genomics and cancer vulnerabilities  

Science Journals Connector (OSTI)

...Cancer Research. November 2014 meeting-abstract Genomics Genomics: Oral Presentations - Invited Abstracts Abstracts...2013; San Diego, CA Abstract IA14: Functional genomics and cancer vulnerabilities William C. Hahn Dana-Farber...

William C. Hahn

2014-11-01T23:59:59.000Z

337

Abstract 5087: UCSC Cancer Genomics Browser 2.0  

Science Journals Connector (OSTI)

...Abstract nr 3720. doi:1538-7445.AM2012-3720 The Global Cancer Genomics Consortium: interfacing genomics and cancer medicine. | The Global Cancer Genomics Consortium (GCGC) is an international collaborative platform that amalgamates...

Jingchun Zhu; Brian Craft; Teresa Swatloski; Kyle Ellrott; Mary Goldman; Christopher Wilks; Singer Ma; Christopher Szeto; Eric Collisson; David Haussler

2012-04-15T23:59:59.000Z

338

ASCR Science Network Requirements  

E-Print Network [OSTI]

Computing Research, DOE Office of Science Energy SciencesDepartment of Energy, Office of Science, Office of Advancedthe Directors of the Office of Science, Office of Advanced

Dart, Eli

2010-01-01T23:59:59.000Z

339

Energy Science at NERSC  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Capture and Sequestration Activities at NERSC Novel Methods for Harvesting Solar Energy Engineering Science Environmental Science Fusion Science Math & Computer Science...

340

U.S. Department of Energy Joint Genome Institute Progress Report  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

U.S. Department of Energy Joint Genome Institute Progress Report Sequencing the world of possibilities for energy and the environment Table of Contents DOE JGI Mission ........................................................ 7 Director's Perspective.................................................... 8 DOE Mission Areas ................................................... 12 By the Numbers.......................................................... 14 User Map ............................................................ 15 Scientific Literature/Impact ................................ 16 DOE JGI Sequence Output .............................. 17 DOE JGI Team Science Realized ....................... 18 DOE JGI User Community ............................... 19 User Meeting 5 ...........................................................

Note: This page contains sample records for the topic "bssd genomic science" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


341

What Makes Science, Science? Research, Shared Effort ... & A...  

Broader source: Energy.gov (indexed) [DOE]

What Makes Science, Science? Research, Shared Effort ... & A New Office of Science Website What Makes Science, Science? Research, Shared Effort ... & A New Office of Science...

342

Processing Science  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Processing Science Related to the Electron Beam Melting Additive Manufacturing Process October 14 th , 2014 Ryan Dehoff Metal Additive Manufacturing Thrust Lead Manufacturing...

343

Popular Science  

Science Journals Connector (OSTI)

... price. That, and a vocal public opinion in the world of science against comic, pyrotechnic, mvstic, or other profane tickling of the groundlings, might do much in a ...

VICTORIAN

1920-02-12T23:59:59.000Z

344

Genome Biology 2004, 5:343 commentreviewsreportsdepositedresearchinteractionsinformationrefereedresearch  

E-Print Network [OSTI]

://genomebiology.com/2004/5/9/343 © 2004 BioMed Central Ltd A report on the Keystone Symposium `Structural Genomics', held-dollar-plus folly? Two concurrent Keystone Symposia, `Structural Genomics' and `Frontiers in Structural Biology set up an auto- mated pipeline to annotate proteins of known structure but unknown function. The push

345

DOE JGI Whole Genome Shotgun Sequencing, part 1  

ScienceCinema (OSTI)

A Howard Hughes Medical Institute (HHMI) video production describing the Whole Genome Shotgun Sequencing process at the US Department of Energy's Joint Genome Institute (JGI).

Miranda Harmon-Smith

2010-09-01T23:59:59.000Z

346

Functional Genomics of Nervous System Development and Disease .  

E-Print Network [OSTI]

??The goal of functional genomics is to elucidate the relationship between an organism's genotype and phenotype. A key characteristic of functional genomics is the use (more)

Miller, Michael Ryan

2011-01-01T23:59:59.000Z

347

SciTech Connect: Achievements of structural genomics  

Office of Scientific and Technical Information (OSTI)

Achievements of structural genomics Citation Details In-Document Search Title: Achievements of structural genomics You are accessing a document from the Department of Energy's...

348

DOE Joint Genome Institute: Peach Genome Offers Insights into Breeding  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

March 24, 2013 March 24, 2013 Peach Genome Offers Insights into Breeding Strategies for Biofuels Crops Rapidly growing trees like poplars and willows are candidate "biofuel crops" from which it is expected that cellulosic ethanol and higher energy content fuels can be efficiently extracted. Domesticating these crops requires a deep understanding of the physiology and genetics of trees, and scientists are turning to long-domesticated fruit trees for hints. The relationship between a peach and a poplar may not be obvious at first glance, but to botanists both trees are part of the rosid superfamily, which includes not only fruit crops like apples, strawberries, cherries, and almonds, but many other plants as well, including rose that gives the superfamily its name.

349

Comparative genomics analysis of Liberibacter species to elucidate pathogenesis and culturability  

E-Print Network [OSTI]

Vol. 1 (2014) Comparative genomics analysis of Liberibacterof citrus, comparative genomics of this strain with other

Leonard, Michael T.; Fagen, Jennie R.; McCullough, Connor M.; Davis-Richardson, Austin G.; Davis, Michael J.; Triplett, Eric W.

2014-01-01T23:59:59.000Z

350

Nuclear Science at NERSC  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Accelerator Science Accelerator Science Astrophysics Biological Sciences Chemistry & Materials Science Climate & Earth Science Energy Science Engineering Science Environmental Science Fusion Science Math & Computer Science Nuclear Science Science Highlights NERSC Citations HPC Requirements Reviews Home » Science at NERSC » Nuclear Science Nuclear Science Experimental and theoretical nuclear research carried out at NERSC is driven by the quest for improving our understanding of the building blocks of matter. This includes discovering the origins of nuclei and identifying the forces that transform matter. Specific topics include: Nuclear astrophysics and the synthesis of nuclei in stars and elsewhere in the cosmos; Nuclear forces and quantum chromodynamics (QCD), the quantum field

351

Science Exhibition  

Science Journals Connector (OSTI)

...Drierite, the desiccant used in industry...for drying solids, liquids, and gases. Samples of...Physical and Natural Sciences...liquids or gases, and controllable...of liquid or gas pressures over...washing, dehydration, clearing...Ward's Natural Science Establishment...

1946-03-01T23:59:59.000Z

352

Assistant Director Physical Science and Engineering  

E-Print Network [OSTI]

Genomics Plant Genome Physics of the Universe Education & Workforce Dev. Research Business Models Global

353

Funding Opportunities | U.S. DOE Office of Science (SC)  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Opportunities Opportunities Funding Opportunities Grants & Contracts Support Award Search Find Funding Early Career Research Program Contact Information Office of Science U.S. Department of Energy 1000 Independence Ave., SW Washington, DC 20585 P: (202) 586-5430 JGI Illumina Genome Sequencers BNL Joint Genome Institute genome sequencers. Lawrence Berkeley National Laboratory Print Text Size: A A A RSS Feeds FeedbackShare Page The Office of Science issues two types of funding announcements: Funding Opportunity Announcements (FOAs), which may be open to one or more institution types (please read the eligibility requirements in a given FOA for details); and DOE National Laboratory Announcements, which are open only to DOE Laboratories. FOAs and DOE National Laboratory Announcements may be issued either as

354

Proteogenomics : applications of mass spectrometry at the interface of genomics and proteomics  

E-Print Network [OSTI]

of proteomics and genomics to unravel the specificities ofetry and comparative genomics to analyze multiple genomes,genome, Comp. Funct. Genomics, vol. 3, no. 3, pp. 244253,

Castellana, Natalie

2012-01-01T23:59:59.000Z

355

Science Learning+: Phase 1 projects Science Learning+  

E-Print Network [OSTI]

Science Learning+: Phase 1 projects Science Learning+ Phase 1 projects 2 December 2014 #12..............................................................................................................4 Youth access and equity in informal science learning: developing a research and practice agenda..................................................................................................5 Enhancing informal learning through citizen science..............................................6

Rambaut, Andrew

356

Science, Mathematics, Computer Science, Software Engineering  

Science Journals Connector (OSTI)

......but in SE the lack of science makes `process' an...38] written about management science, which applies in spades...Computer science. Science, 157, 13731374...An InitialAlgebra Approach to the Specification......

Dick Hamlet

2012-01-01T23:59:59.000Z

357

Plant Genomics Vol 3.pmd  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Populus Populus Genome Initiative Stephen DiFazio Department of Biology, West Virginia University, Morgantown, West Virginia 26508-6057 USA Email: spdifazio@mail.wvu.edu 8 1 INTRODUCTION 1.1 Background on Populus Biology The genus Populus consists of about 29 species organized into six major sections that occur primarily in the Northern Hemisphere (Eckenwalder 1996). Species from the different sections of the genus have diverse ecological characteristics. Two of the most economically important sections (Aigeiros and Tacamahaca) contain species collectively known as cottonwoods. These occur mostly in riparian zones and are characterized by primarily ruderal life history, dominating early successional stages and thriving on flood-mediated disturbance (Braatne et al. 1996; Karrenberg et al. 2002). The other major section of the genus (section Populus,

358

DOE Joint Genome Institute: Model Microbial Community for Studying  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

October 22, 2009 October 22, 2009 Model Microbial Community for Studying Expanding Dead Zones Characterized WALNUT CREEK, CA-Among the many changes in the ocean is the expansion of oxygen-deficient or oxygen minimum zones (OMZs), also known as dead zones, which affect the processes by which carbon is captured and sequestered on the seafloor and alter the microbial activities that impact the rate and magnitude of ocean carbon sequestration. Despite the importance of these effects, very little is known about the metabolism of OMZ microbes and how they respond to environmental changes. In the Oct. 23 issue of the journal Science, researchers from the University of British Columbia and the U.S. Department of Energy Joint Genome Institute (DOE JGI) describe the metagenome of an abundant but

359

Genome-Wide siRNA-Based Functional Genomics of Pigmentation Identifies Novel Genes and Pathways That Impact Melanogenesis in Human Cells  

E-Print Network [OSTI]

siRNA-Based Functional Genomics of Pigmentation Identifiespoorly understood. Functional genomics based on RNA-mediatedof RNAi-based functional genomics to identify novel genes,

2008-01-01T23:59:59.000Z

360

Natural Sciences Tripos EARTH SCIENCES  

E-Print Network [OSTI]

. The majority of Cambridge graduates remain within geology. Exploration and production of oil and gas still is the science of the Earth. What is the Earth made of? What processes shape and change it? What's happened of processes, geology is a holistic science, integrating physics, chemistry and biology with the evidence

Cambridge, University of

Note: This page contains sample records for the topic "bssd genomic science" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


361

Chapter 18 - The Genomics of Cladoceran Physiology  

Science Journals Connector (OSTI)

Recent advances in genomic approaches and their increasing application to a wide range of taxa are contributing to the rapid development of the field of physiological genomics. Understanding the relationship between organisms and their environment is central to this field that focuses on genomic exploration of the physiological mechanisms that underlie organism-environment interactions and phenotypic plasticity. Cladoceran crustaceans have long been the subject of physiological investigation and are now tractable and versatile models for physiological genomics. A wide diversity of habitats and physiologies along with the recent development of genomic tools, most notably in the genus Daphnia, make cladocerans a compelling taxonomic group to investigate the relationship between genome structure, function and physiological mechanisms in a comparative framework that will also illuminate the evolutionary processes underlying these mechanisms. In this chapter we highlight a series of case studies to illustrate the potential to use cladocerans to illuminate the physiological mechanisms that mediate the response of organisms to environmental challenges. We focus on the genus Daphnia because of the rich history in ecological, evolutionary, and physiological research on this group and the recent investigations into its ecoresponsive genome. Finally, we prospectively outline productive avenues for future investigation.

Drthe Becker; Kay Van Damme; Elizabeth Turner; Joseph R. Shaw; John K. Colbourne; Michael E. Pfrender

2014-01-01T23:59:59.000Z

362

Genome Sequence of the Palaeopolyploid soybean  

SciTech Connect (OSTI)

Soybean (Glycine max) is one of the most important crop plants for seed protein and oil content, and for its capacity to fix atmospheric nitrogen through symbioses with soil-borne microorganisms. We sequenced the 1.1-gigabase genome by a whole-genome shotgun approach and integrated it with physical and high-density genetic maps to create a chromosome-scale draft sequence assembly. We predict 46,430 protein-coding genes, 70percent more than Arabidopsis and similar to the poplar genome which, like soybean, is an ancient polyploid (palaeopolyploid). About 78percent of the predicted genes occur in chromosome ends, which comprise less than one-half of the genome but account for nearly all of the genetic recombination. Genome duplications occurred at approximately 59 and 13 million years ago, resulting in a highly duplicated genome with nearly 75percent of the genes present in multiple copies. The two duplication events were followed by gene diversification and loss, and numerous chromosome rearrangements. An accurate soybean genome sequence will facilitate the identification of the genetic basis of many soybean traits, and accelerate the creation of improved soybean varieties.

Schmutz, Jeremy; Cannon, Steven B.; Schlueter, Jessica; Ma, Jianxin; Mitros, Therese; Nelson, William; Hyten, David L.; Song, Qijian; Thelen, Jay J.; Cheng, Jianlin; Xu, Dong; Hellsten, Uffe; May, Gregory D.; Yu, Yeisoo; Sakura, Tetsuya; Umezawa, Taishi; Bhattacharyya, Madan K.; Sandhu, Devinder; Valliyodan, Babu; Lindquist, Erika; Peto, Myron; Grant, David; Shu, Shengqiang; Goodstein, David; Barry, Kerrie; Futrell-Griggs, Montona; Abernathy, Brian; Du, Jianchang; Tian, Zhixi; Zhu, Liucun; Gill, Navdeep; Joshi, Trupti; Libault, Marc; Sethuraman, Anand; Zhang, Xue-Cheng; Shinozaki, Kazuo; Nguyen, Henry T.; Wing, Rod A.; Cregan, Perry; Specht, James; Grimwood, Jane; Rokhsar, Dan; Stacey, Gary; Shoemaker, Randy C.; Jackson, Scott A.

2009-08-03T23:59:59.000Z

363

DEPARTMENT OF COMPUTER SCIENCE FACULTY OF SCIENCE  

E-Print Network [OSTI]

DEPARTMENT OF COMPUTER SCIENCE FACULTY OF SCIENCE AARHUS UNIVERSITY Grant Evaluations - observations and advice Michael I. Schwartzbach #12;DEPARTMENT OF COMPUTER SCIENCE FACULTY OF SCIENCE AARHUS: Natural Sciences > 16 members, 2 for Computer Science/Mathematics A large volume: > in 2010 we received

364

Faculty of Science Computer Science Handbook  

E-Print Network [OSTI]

Faculty of Science Computer Science Handbook 2013 #12;Welcome to Computer Science Welcome from the Head of Department 2 What is Computer Science? 2 Careers in Computer Science 3 What can you do with a Computer Science degree? 4 Meet our students 5 Academic information Important dates 7 Admission

Sun, Jing

365

Computer Science UNDERGRADUATE  

E-Print Network [OSTI]

447 Computer Science UNDERGRADUATE PROGRAMS The Department of Computer Science provides undergraduate instruction leading to the bachelor's degree in computer science. This program in computer science is accredited by the Computer Science Accreditation Board (CSAB), a specialized accrediting body recognized

Suzuki, Masatsugu

366

BES Science Network Requirements  

E-Print Network [OSTI]

the Directors of the Office of Science, Office of AdvancedBasic Energy Sciences, DOE Office of Science Energy SciencesDepartment of Energy, Office of Science, Office of Advanced

Dart, Eli

2011-01-01T23:59:59.000Z

367

Automatic annotation of organellar genomes with DOGMA  

SciTech Connect (OSTI)

Dual Organellar GenoMe Annotator (DOGMA) automates the annotation of extra-nuclear organellar (chloroplast and animal mitochondrial) genomes. It is a web-based package that allows the use of comparative BLAST searches to identify and annotate genes in a genome. DOGMA presents a list of putative genes to the user in a graphical format for viewing and editing. Annotations are stored on our password-protected server. Complete annotations can be extracted for direct submission to GenBank. Furthermore, intergenic regions of specified length can be extracted, as well the nucleotide sequences and amino acid sequences of the genes.

Wyman, Stacia; Jansen, Robert K.; Boore, Jeffrey L.

2004-06-01T23:59:59.000Z

368

Information Science, Computing, Applied Math  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Capabilities ISC Applied Math science-innovationassetsimagesicon-science.jpg Information Science, Computing, Applied Math National security depends on science and...

369

Initial sequencing and analysis of the human genome  

E-Print Network [OSTI]

Initial sequencing and analysis of the human genome International Human Genome Sequencing. ............................................................................................................................................................................................................................................................................ The human genome holds an extraordinary trove of information about human development, physiology, medicine a draft sequence of the human genome. We also present an initial analysis of the data, describing some

Eddy, Sean

370

Comparing Bacterial Genomes by Searching their Common Intervals  

E-Print Network [OSTI]

Comparing Bacterial Genomes by Searching their Common Intervals S´ebastien Angibaud, Damien. Comparing bacterial genomes implies the use of a dedicated measure. It relies on comparing circular genomes genomes that takes into account duplications. Its application on a concrete case, comparing E. coli and V

Fertin, Guillaume

371

Genome Organization and Gene Expression Shape the Transposable Element Distribution  

E-Print Network [OSTI]

Genome Organization and Gene Expression Shape the Transposable Element Distribution The distribution of transposable elements (TEs) in a genome reflects a balance between insertion rate and selection shaping the organization of genomes. Past research has shown that TEs tend to accumulate in genomic

Alvarez, Nadir

372

Assembly and Analysis of Extended Human Genomic Contig Regions  

E-Print Network [OSTI]

@ibc.wustl.edu; states@ibc.wustl.edu Abstract The Human Genome Project (HGP) has led to the deposit of human genomic The U.S. Human Genome Project, coordinated by the United States Department of Energy (DOEAssembly and Analysis of Extended Human Genomic Contig Regions Eric C. Rouchka and David J. States

Rouchka, Eric

373

Genomic Signal Processing: From Matrix Algebra to Genetic Networks  

E-Print Network [OSTI]

-Scale Molecular Biological Data The Human Genome Project, and the resulting sequencing of complete genomes, fueled (GSVD); pseudoinverse projection; blind source separation (BSS) algorithms; genome-scale RNA expression now be measured on genomic scales (e.g., refs. 3 and 4). For the first time in human history

Utah, University of

374

Discovery of functional elements in 12 Drosophila genomes using evolutionary  

E-Print Network [OSTI]

Genome Project{, Emily Hodges12 , Angie S. Hinrichs4 , Anat Caspi13 , Benedict Paten4,5,14 , Seung for comparative studies. The sequencing of the human genome and the genomes of dozens of other metazoan speciesARTICLES ; genomes using evolutionary

Kellis, Manolis

375

The Mastermind Attack on Genomic Data Michael T. Goodrich  

E-Print Network [OSTI]

]. Moreover, a project to fully sequence 1,000 human genomes in the next few years is already under way [24 diploid human genomes will be economically affordable. The milestone of the first human genome sequence draft in 2001 [12], [39] has recently been followed by the first diploid human genome sequence [26

Goodrich, Michael T.

376

Update on human genome completion and annotations: Protein information  

E-Print Network [OSTI]

Update on human genome completion and annotations: Protein information resource Cathy Wu1 The high-throughput genome projects have resulted in a rapid accumulation of genome sequences for a large-PSD, SwissProt and TrEMBL) proteins--organised into more than 36,290 PIR superfamilies, Human Genomics 95760

377

Phylogenetics of modern birds in the era of genomics  

Science Journals Connector (OSTI)

...Phylogenetics of modern birds in the era of genomics Scott V Edwards * W Bryan Jennings Andrew...witnessed the advent and maturation of the genomics era, the completion of the chicken genome...for birds. A variety of comparative genomics strategies, including adoption of objective...

2005-01-01T23:59:59.000Z

378

APPLIED GENOMICS TECHNOLOGY CENTER www.agtc.med.wayne.edu  

E-Print Network [OSTI]

APPLIED GENOMICS TECHNOLOGY CENTER www.agtc.med.wayne.edu CURRENT SERVICES CONTACT INFORMATION Dr. Susan J. Land, Ph.D. Laboratory Director ABOUT THE FACILITY The Applied Genomics Technology Center (AGTC-of-the-art, fee-for-service genomics center that provides a wide range of genomic technologies to the medical

Berdichevsky, Victor

379

Target selection and current status of structural genomics for the  

E-Print Network [OSTI]

33 Target selection and current status of structural genomics for the completed microbial genomes 3.2 Structural status of completed microbial genomes in the PDB................ 3.3 Metabolic pathways as targets for structural genomics.......................... 3.3.1 Glycolytic pathway

Babu, M. Madan

380

Phylogenetics of modern birds in the era of genomics  

E-Print Network [OSTI]

Review Phylogenetics of modern birds in the era of genomics Scott V. Edwards*, W. Bryan Jennings and maturation of the genomics era, the completion of the chicken genome and a suite of technologies that promise genomics strategies, including adoption of objective quality scores for sequence data, analysis

Edwards, Scott

Note: This page contains sample records for the topic "bssd genomic science" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


381

Functional Genomics: It's All How You Read It  

E-Print Network [OSTI]

Functional Genomics: It's All How You Read It Philip Hieter and Mark Boguski "Functional genomics to functional genomics? An informal poll of colleagues indicates that the term is widely used, but has many genomics websites that have sprung up over the last 12 months clearly demonstrates that interpretations

Boguski, Mark S.

382

Mapping the Human Reference Genome's Missing Sequence by Three-Way Admixture in Latino Genomes  

E-Print Network [OSTI]

ARTICLE Mapping the Human Reference Genome's Missing Sequence by Three-Way Admixture in Latino Genomes Giulio Genovese,1,2,3,* Robert E. Handsaker,2,3 Heng Li,2,3 Eimear E. Kenny,4,5,6,7,8 and Steven A. McCarroll1,2,3,* A principal obstacle to completing maps and analyses of the human genome involves

McCarroll, Steve

383

Nuclear Science  

Broader source: Energy.gov (indexed) [DOE]

Science Science and Engineering Education Sourcebook 2013 American Nuclear Society US Department of Energy Nuclear Science & Engineering Education Sourcebook 2013 North American Edition American Nuclear Society Education, Training, and Workforce Division US Department of Energy Office of Nuclear Energy Editor and Founder John Gilligan Professor of Nuclear Engineering North Carolina State University Version 5.13 Welcome to the 2013 Edition of the Nuclear Science and Engineering Education (NS&EE) Sourcebook. We have evolved and improved! The core mission of the Sourcebook has not changed, however. Our purpose is to facilitate interaction among faculty, students, industry, and government agencies to accomplish nuclear research, teaching and service activities. Since 1986 we have compiled critical information on nuclear

384

Energy Science  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Energy Science Energy Science Energy Science Print Our current fossil-fuel-based system is causing potentially catastrophic changes to our planet. The quest for renewable, nonpolluting sources of energy requires us to understand, predict, and ultimately control matter and energy at the electronic, atomic, and molecular levels. Light-source facilities-the synchrotrons of today and the next-generation light sources of tomorrow-are the scientific tools of choice for exploring the electronic and atomic structure of matter. As such these photon-science facilities are uniquely positioned to jump-start a global revolution in renewable and carbon-neutral energy technologies. To establish the scientific foundations for the kind of transformative breakthroughs needed to build a 21st-century energy economy, we must address fundamental questions involving matter and energy. Below is a sampling of such questions that can be addressed by light-source facilities:

385

Science Headlines  

Office of Science (SC) Website

is the principal federal funding agency of - the Nation's research programs in high-energy physics, nuclear physics, and fusion energy sciences. en ACBFAD0E-6C01-4559-9833-E1AA...

386

Accelerating Biofuel Feedstock Crop Improvement with Miscanthus Genomics (2014 DOE JGI Genomics of Energy & Environment Meeting)  

SciTech Connect (OSTI)

Kankshita Swaminathan of the Energy Biosciences Institute speaks at the 9th Annual Genomics of Energy & Environment Meeting on March 20, 2014 in Walnut Creek, Calif.

Swaminathan, Kankshita [Energy Biosciences Institute

2014-03-20T23:59:59.000Z

387

Application of comparative genomics for detection of genomic features and transcriptional regulatory elements.  

E-Print Network [OSTI]

??In the wake of advanced DNA sequencing technology, a large number of bacterial, animal, and plant genomes have now been completely sequenced and deposited into (more)

Lu, Hong

2011-01-01T23:59:59.000Z

388

Genomics and Clinical MedicineTranslational Research in Genetics and Genomics  

Science Journals Connector (OSTI)

...important identity to a new scientific discipline genomics when he and Frank Ruddle launched a new journal by that name 3 years before the 1990 launch of the Human Genome Project. When McKusick asked me to succeed him as the editor-in-chief of Genomics in 2003, the year in which the "finished" human... The death in July 2008 of Victor A. McKusick marked the end of an era. McKusick, widely considered to be the founding father of medical genetics, gave both a name and an important identity to a new scientific discipline genomics when he and Frank ...

Boguski M.S.

2008-10-30T23:59:59.000Z

389

Genome Engineering with TAL Effector Nucleases  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Genome Engineering with TAL Effector Nucleases Print Genome Engineering with TAL Effector Nucleases Print Genome engineering (GE), an emerging discipline in which a DNA sequence is altered at a single position, has a wide variety of potential uses, such as the correction of gene sequences in patients suffering from genetic diseases, the modification or insertion of genes in plants, and the generation of unique cell lines for treatment of diseases such as cancer. GE requires the development of molecular tools that can search out and bind to one unique site within a complex genome while avoiding 'off-target' interactions across the remaining billions of DNA bases present in a cell's nucleus. Using ALS Beamline 5.0.2, researchers have solved the structure of one such tool called a TAL protein, learning its mechanism of action for DNA recognition and binding.

390

Genome Engineering with TAL Effector Nucleases  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Genome Engineering with TAL Effector Nucleases Print Genome Engineering with TAL Effector Nucleases Print Genome engineering (GE), an emerging discipline in which a DNA sequence is altered at a single position, has a wide variety of potential uses, such as the correction of gene sequences in patients suffering from genetic diseases, the modification or insertion of genes in plants, and the generation of unique cell lines for treatment of diseases such as cancer. GE requires the development of molecular tools that can search out and bind to one unique site within a complex genome while avoiding 'off-target' interactions across the remaining billions of DNA bases present in a cell's nucleus. Using ALS Beamline 5.0.2, researchers have solved the structure of one such tool called a TAL protein, learning its mechanism of action for DNA recognition and binding.

391

Joint Genome Institute (JGI) Projects at NERSC  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Joint Genome Institute Joint Genome Institute (JGI) Joint Genome Institute (JGI) nicole-illumina-flowcell.jpg Key Challenges: Ensuring that there is a robust computational infrastructure for managing, storing and gleaning scientific insights from the torrent of data that constantly flows from the advanced sequencing platforms at the Department of Energy Joint Genome Institute (JGI). JGI sequencing capacity exceeds 40 billion DNA base pairs per year and is growing at a rate that exceeds computer hardware improvements, with exponential increases in computation and storage needed. JGI will generate about 1 petabyte of data in their first year as a NERSC partner; this is expected to double each year. Why it Matters: JGI is the primary production sequencing facility for the DOE. By revealing the genetic blueprint and fundamental principles that

392

Computational comparative genomics : genes, regulation, evolution  

E-Print Network [OSTI]

Understanding the biological signals encoded in a genome is a key challenge of computational biology. These signals are encoded in the four-nucleotide alphabet of DNA and are responsible for all molecular processes in the ...

Kamvysselis, Manolis, 1977-

2003-01-01T23:59:59.000Z

393

Genomics of wood-degrading fungi  

Science Journals Connector (OSTI)

Abstract Woody plants convert the energy of the sun into lignocellulosic biomass, which is an abundant substrate for bioenergy production. Fungi, especially wood decayers from the class Agaricomycetes, have evolved ways to degrade lignocellulose into its monomeric constituents, and understanding this process may facilitate the development of biofuels. Over the past decade genomics has become a powerful tool to study the Agaricomycetes. In 2004 the first sequenced genome of the white rot fungus Phanerochaete chrysosporium revealed a rich catalog of lignocellulolytic enzymes. In the decade that followed the number of genomes of Agaricomycetes grew to more than 75 and revealed a diversity of wood-decaying strategies. New technologies for high-throughput functional genomics are now needed to further study these organisms.

Robin A. Ohm; Robert Riley; Asaf Salamov; Byoungnam Min; In-Geol Choi; Igor V. Grigoriev

2014-01-01T23:59:59.000Z

394

Comparative genomics and bioenergetics Jose Castresana *  

E-Print Network [OSTI]

Review Comparative genomics and bioenergetics Jose Castresana * European Molecular Biology conclusions about the phylogenetic distribution and evolution of bioenergetic pathways to be drawn conservation used by prokaryotes. In addition, a thorough phylogenetic analysis of other bioenergetic protein

Castresana, Jose

395

Genomic aggregation effects and Simpson's paradox  

E-Print Network [OSTI]

Genomic studies have become commonplace, with thousands of gene expressions typically collected on single or multiple platforms and analyzed. Unaccounted time-ordered or epigenetic aspects of genetic expression may lead ...

Brimacombe, Michael

2014-01-08T23:59:59.000Z

396

Justice and the Human Genome Project  

SciTech Connect (OSTI)

Most of the essays gathered in this volume were first presented at a conference, Justice and the Human Genome, in Chicago in early November, 1991. The goal of the, conference was to consider questions of justice as they are and will be raised by the Human Genome Project. To achieve its goal of identifying and elucidating the challenges of justice inherent in genomic research and its social applications the conference drew together in one forum members from academia, medicine, and industry with interests divergent as rate-setting for insurance, the care of newborns, and the history of ethics. The essays in this volume address a number of theoretical and practical concerns relative to the meaning of genomic research.

Murphy, T.F.; Lappe, M. [eds.] [eds.

1992-12-31T23:59:59.000Z

397

Justice and the Human Genome Project  

SciTech Connect (OSTI)

Most of the essays gathered in this volume were first presented at a conference, Justice and the Human Genome, in Chicago in early November, 1991. The goal of the, conference was to consider questions of justice as they are and will be raised by the Human Genome Project. To achieve its goal of identifying and elucidating the challenges of justice inherent in genomic research and its social applications the conference drew together in one forum members from academia, medicine, and industry with interests divergent as rate-setting for insurance, the care of newborns, and the history of ethics. The essays in this volume address a number of theoretical and practical concerns relative to the meaning of genomic research.

Murphy, T.F.; Lappe, M. (eds.)

1992-01-01T23:59:59.000Z

398

Integrated genomic analyses of ovarian carcinoma  

E-Print Network [OSTI]

A catalogue of molecular aberrations that cause ovarian cancer is critical for developing and deploying therapies that will improve patients lives. The Cancer Genome Atlas project has analysed messenger RNA expression, ...

Lander, Eric S.

399

Integrated genomic characterization of endometrial carcinoma  

E-Print Network [OSTI]

We performed an integrated genomic, transcriptomic and proteomic characterization of 373 endometrial carcinomas using array- and sequencing-based technologies. Uterine serous tumours and ~25% of high-grade endometrioid ...

Lander, Eric S.

400

Next-generation information systems for genomics  

E-Print Network [OSTI]

The advent of next-generation sequencing technologies is transforming biology by enabling individual researchers to sequence the genomes of individual organisms or cells on a massive scale. In order to realize the ...

Mungall, Christopher

2011-06-27T23:59:59.000Z

Note: This page contains sample records for the topic "bssd genomic science" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


401

First international E. coli genome meeting  

SciTech Connect (OSTI)

This volume is a collection of abstracts of oral presentations and poster sessions of studies reported at the First International E. Coli Genome Meeting, held September 10-14, 1992 at the University of Wisconsin.

Not Available

1992-01-01T23:59:59.000Z

402

Webinar December 2: Materials Genome Initiative  

Broader source: Energy.gov [DOE]

The Energy Department will present a live webinar entitled "Materials Genome Initiative" on Tuesday, December 2, from 12:00 to 1:00 p.m. Eastern Standard Time.

403

Chapter One - Fungal Genomics: Sequencing and Annotation  

Science Journals Connector (OSTI)

Abstract Plants grow in close associations with fungipathogens, symbionts, and endophytesand depend on these associations for success. Therefore, understanding the mechanisms of these interactions is important in order to create optimal conditions for plant growth. Genomics is a powerful tool not only to discover the potential encoded in genomes of both plants and plant-associated fungi but also to monitor dynamics of their interactions through gene expression and other genome-enabled analyses. Next-generation sequencing technologies offer tools to explore nature's wide array of plantfungal interactions in unprecedented depth, and the sheer volume of data produced is enormous. Several approaches to assemble, annotate, and analyse this wealth of genomics data are discussed in this chapter.

Alan Kuo; Brian Bushnell; Igor V. Grigoriev

2014-01-01T23:59:59.000Z

404

PGAP: pan-genomes analysis pipeline  

Science Journals Connector (OSTI)

......called pan-genomes analysis pipeline (PGAP), which has integrated...Stanhope, 2007). In PGAP pipeline, 1366 core clusters have been...replication, recombination and repair, cell wall/membrane/envelope...replication, recombination and repair and cell wall/membrane......

Yongbing Zhao; Jiayan Wu; Junhui Yang; Shixiang Sun; Jingfa Xiao; Jun Yu

2012-02-01T23:59:59.000Z

405

Genome Engineering with TAL Effector Nucleases  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Genome Engineering with TAL Effector Nucleases Print Genome Engineering with TAL Effector Nucleases Print Genome engineering (GE), an emerging discipline in which a DNA sequence is altered at a single position, has a wide variety of potential uses, such as the correction of gene sequences in patients suffering from genetic diseases, the modification or insertion of genes in plants, and the generation of unique cell lines for treatment of diseases such as cancer. GE requires the development of molecular tools that can search out and bind to one unique site within a complex genome while avoiding 'off-target' interactions across the remaining billions of DNA bases present in a cell's nucleus. Using ALS Beamline 5.0.2, researchers have solved the structure of one such tool called a TAL protein, learning its mechanism of action for DNA recognition and binding.

406

1st Genomics-Bioinformatics Day on "Comparative Genomics" April 24th 2003 in the Medawar Building in the  

E-Print Network [OSTI]

1st Genomics-Bioinformatics Day on "Comparative Genomics" April 24th 2003 in the Medawar Building. There is a need, however, for researchers interested in genomics and bioinformatics to meet, so Jotun Hein, Richard Mott and Chris Ponting have organised the first Genomics/Bioinformatics day. It is our intention

Goldschmidt, Christina

407

Genomic analysis of the horse Y chromosome  

E-Print Network [OSTI]

OF PHILOSOPHY December 2004 Major Subject: Genetics GENOMIC ANALYSIS OF THE HORSE Y CHROMOSOME A Dissertation by AVNI BHAWAN SANTANI Submitted to Texas A&M University in partial fulfillment of the requirements for the degree... of Department) December 2004 Major Subject: Genetics iii ABSTRACT Genomic Analysis of the Horse Y Chromosome. (December 2004) Avni Bhawan Santani, B.S., University of Mumbai; M.S., University of Aberdeen Chair of Advisory Committee: Dr. Bhanu P...

Santani, Avni Bhawan

2005-02-17T23:59:59.000Z

408

Cheminformatics for genome-scale metabolic reconstructions  

E-Print Network [OSTI]

.15 Problematic tetrahedral stereocentres . . . . . . . . . . . . . . . . . . . . . 190 6.16 Corrupting stereochemistry depiction . . . . . . . . . . . . . . . . . . . . 192 6.17 Variable CIP descriptors of myo-inositol using JChem . . . . . . . . . . . 193 6... of Biological Interest CIP Cahn-Ingold-Prelog EC Enzyme Commission GEM Genome-scale metabolic model GPR Gene-Protein-Reaction InChI IUPAC International Chemical Identifier KEGG Kyoto Encyclopedia of Genes and Genomes MIRIAM Minimum Information Required...

May, John W.

2015-01-06T23:59:59.000Z

409

Neutron Science | More Science | ORNL  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

ORNL's long history of neutron science began in the 1940s with the pioneering neutron scattering studies of Ernest Wollan and Clifford Shull. Shull was co-recipient of...

410

Materials Science & Engineering | More Science | ORNL  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Advanced Materials Clean Energy Materials Theory and Simulation Neutron Science Nuclear Forensics Nuclear Science Supercomputing Theory, Modeling and Simulation Mathematics Physics More Science Home | Science & Discovery | More Science | Materials Science and Engineering SHARE Materials Science and Engineering ORNL's core capability in applied materials science and engineering directly supports missions in clean energy, national security, and industrial competitiveness. A key strength of ORNL's materials science program is the close coupling of basic and applied R&D. Programs building on this core capability are focused on (1) innovations and improvements in materials synthesis, processing, and design; (2) determination and manipulation of critical structure-property relationships, and (3)

411

ASCR Science Network Requirements  

E-Print Network [OSTI]

ASCR Science Network Requirements Office of AdvancedScientific Computing Research, DOE Office of ScienceEnergy Sciences Network Gaithersburg, MD April 15 and 16,

Dart, Eli

2010-01-01T23:59:59.000Z

412

BER Science Network Requirements  

E-Print Network [OSTI]

of Energy, Office of Science, Office of Advanced Scientificthe Directors of the Office of Science, Office of Advanced5 Simulation Data Key Remote Science Drivers Instruments and

Dart, Eli

2011-01-01T23:59:59.000Z

413

Science Requirements Process  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

and Presentations Galleries ESnet Awards and Honors ESnet Live Blog Home Science Engagement Science Requirements Reviews Science Engagement Move your data Programs...

414

Science of Signatures  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Science of Signatures Science of Signatures (SoS) The Lab's four Science Pillars harness capabilities for solutions to threats- on national and global scales. Contacts Pillar...

415

BES Science Network Requirements  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

the Basic Energy Sciences Network Requirements Workshop Conducted June 4-5, 2007 BES Science Network Requirements Workshop Basic Energy Sciences Program Office, DOE Office of...

416

ORISE: Science Education Events  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Science Education Events Science Education Events Recognizing that vast improvements in science, technology, engineering and math are key to innovation and economic growth, the Oak...

417

More Science | ORNL  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Biology Chemistry Engineering Computer Science Earth and Atmospheric Sciences Materials Science and Engineering Mathematics Physics ORNL wins six R&D 100s R&D Magazine recognizes...

418

Top Science of 2013  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

RAPTOR telescope witnesses black hole birth science-innovationassetsimagesicon-science.jpg Top Science of 2013 Our strong interdisciplinary teaming and unique research...

419

Top Science of 2013  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

firsts pave way for greener, faster supercomputing science-innovationassetsimagesicon-science.jpg Top Science of 2013 Our strong interdisciplinary teaming and unique...

420

Science and Innovation  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Innovation science-innovationassetsimagesicon-science.jpg Science and Innovation Our strong interdisciplinary teaming and unique research facilities allow us to develop...

Note: This page contains sample records for the topic "bssd genomic science" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


421

Basic Energy Sciences Reports  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Basic Energy Sciences Reports Basic Energy Sciences Reports The list below of Basic Energy Sciences workshop reports addresses the status of some important research areas that can...

422

ORISE: Forensic Science  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Forensic Science Forensic Science The Oak Ridge Institute for Science and Education (ORISE) provides direct forensic analytical support, consulting and training services to United...

423

The Science of Science Dr. Katy Brner  

E-Print Network [OSTI]

1 The Science of Science Dr. Katy Börner Cyberinfrastructure for Network Science Center, Director Information Visualization Laboratory, Director School of Library and Information Science Indiana University February 20th, 2008 Computational Scientometrics: Studying Science by Scientific Means Börner, Katy, Chen

Menczer, Filippo

424

College of Health Sciences Health Sciences Connection  

E-Print Network [OSTI]

, College of Health Sciences. · "Innovative Ways to Address Idaho's Healthcare Needs: Long-Term CareCollege of Health Sciences Health Sciences Connection 1 Dean's Message College of Health Sciences Health Sciences Connection February 2011 Volume IX (3) Since the last COHS newsletter, the faculty

Barrash, Warren

425

Telomere Blots with Genomic DNA -de Lange Lab Telomere Blots with Genomic DNA  

E-Print Network [OSTI]

°C. Keep separate for genomic preps. For further information please check the Maniatis handbook 10 ml stock, wrap in aluminum foil, store at RT 1 µl/100 ml gel volume 1 M Sodium Phosphate Buffer p Fill with ddH20 to 1 l. Filter sterilize with a 0.45 µm filter unit. #12;Telomere Blots with Genomic

de Lange, Titia

426

SCIENCE Program  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

SCIENCE Program SCIENCE Program early science program Early at the Argonne Leadership Computing Facility CONTACT  Argonne Leadership Computing Facility | www.alcf.anl.gov | (877) 737-8615 Climate-Weather Modeling Studies Using a Prototype Global Cloud-System Resolving Model PI: Venkatramani Balaji Geophysical Fluid Dynamics Laboratory Award: 150 Million Hours Materials Design and Discovery: Catalysis and Energy Storage PI: Larry Curtiss Argonne National Laboratory Award: 50 Million Hours Direct Numerical Simulation of Autoignition in a Jet in a Cross-Flow PI: Christos Frouzakis Swiss Federal Institute of Technology Award: 150 Million Hours High-Accuracy Predictions of the Bulk Properties of Water PI: Mark Gordon Iowa State University Award: 150 Million Hours Cosmic Structure Probes

427

A Tomato Detached Leaf Assay for Chemical Genomics of an HLB Model System  

E-Print Network [OSTI]

Leaf Assay for Chemical Genomics of an HLB Model Systemapproach known as chemical genomics with Tomato Psyllida model of HLB. Chemical genomics involves three key stages

Patne, S.; Eulgem, T.; Roose, M. L.

2014-01-01T23:59:59.000Z

428

To Know Ourselves: The U.S. Department of Energy and The Human Genome Project  

DOE R&D Accomplishments [OSTI]

The Genome Project and its various aspects: why the DOE?; introducing the human genome; exploring the genomic landscape; beyond biology; and ethical, legal, and social implications.

1996-07-00T23:59:59.000Z

429

Applications of the pipeline environment for visual informatics and genomics computations  

E-Print Network [OSTI]

for visual informatics and genomics computations. BMCfor visual informatics and genomics computations Ivo D DinovContemporary informatics and genomics research require

2011-01-01T23:59:59.000Z

430

Comparative genomics of xylose-fermenting fungi for enhanced biofuel production  

E-Print Network [OSTI]

et al. (2009) Comparative genomics of the fungal pathogensComparative genomics of xylose-fermenting fungi for enhancedapplications. BMC Genomics Wisselink HW, Toirkens MJ, Wu Q,

Wohlbach, Dana J.

2011-01-01T23:59:59.000Z

431

Clustering and Registration of Functional Data with Applications in Time Course Genomics Data  

E-Print Network [OSTI]

of Clustering Methods for Time Course Genomics Data . .Methods for Time Course Genomics Data. To be submitted S.human subjects. BMC Genomics, 13, 2012. 636. Kongming Wang

Zhang, Yafeng

2014-01-01T23:59:59.000Z

432

Genome sequence analysis of the model grass Brachypodium distachyon: insights into grass genome evolution  

SciTech Connect (OSTI)

Three subfamilies of grasses, the Erhardtoideae (rice), the Panicoideae (maize, sorghum, sugar cane and millet), and the Pooideae (wheat, barley and cool season forage grasses) provide the basis of human nutrition and are poised to become major sources of renewable energy. Here we describe the complete genome sequence of the wild grass Brachypodium distachyon (Brachypodium), the first member of the Pooideae subfamily to be completely sequenced. Comparison of the Brachypodium, rice and sorghum genomes reveals a precise sequence- based history of genome evolution across a broad diversity of the grass family and identifies nested insertions of whole chromosomes into centromeric regions as a predominant mechanism driving chromosome evolution in the grasses. The relatively compact genome of Brachypodium is maintained by a balance of retroelement replication and loss. The complete genome sequence of Brachypodium, coupled to its exceptional promise as a model system for grass research, will support the development of new energy and food crops

Schulman, Al

2009-08-09T23:59:59.000Z

433

DOE Joint Genome Institute: Genes from Tiny Algae Shed Light on Big Role  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

April 9, 2009 April 9, 2009 Genes from Tiny Algae Shed Light on Big Role Managing Carbon in World's Oceans & Coping with Environmental Change WALNUT CREEK, CA-Scientists from two-dozen research organizations led by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI) and the Monterey Bay Aquarium Research Institute (MBARI) have decoded genomes of two algal strains, highlighting the genes enabling them to capture carbon and maintain its delicate balance in the oceans. These findings, from a team led by Alexandra Z. Worden of MBARI and published in the April 10 edition of the journal Science, will illuminate cellular processes related to algae-derived biofuels being pursued by DOE scientists. The study sampled two geographically diverse isolates of the photosynthetic

434

The Genome of the Anaerobic Fungus Orpinomyces sp. Strain C1A Reveals the Unique Evolutionary History of a Remarkable Plant Biomass Degrader  

Science Journals Connector (OSTI)

...genomes described thus far. Averages and ranges were computed from...on various carbon sources and effect of temperature on development...Science 336 :1715-1719. 47. Price, AL , NC Jones and PA Pevzner...ethanol production. Energy Fuels 24 :2113-2119. 54. Torget...

Noha H. Youssef; M. B. Couger; Christopher G. Struchtemeyer; Audra S. Liggenstoffer; Rolf A. Prade; Fares Z. Najar; Hasan K. Atiyeh; Mark R. Wilkins; Mostafa S. Elshahed

2013-05-24T23:59:59.000Z

435

VISTA - computational tools for comparative genomics  

SciTech Connect (OSTI)

Comparison of DNA sequences from different species is a fundamental method for identifying functional elements in genomes. Here we describe the VISTA family of tools created to assist biologists in carrying out this task. Our first VISTA server at http://www-gsd.lbl.gov/VISTA/ was launched in the summer of 2000 and was designed to align long genomic sequences and visualize these alignments with associated functional annotations. Currently the VISTA site includes multiple comparative genomics tools and provides users with rich capabilities to browse pre-computed whole-genome alignments of large vertebrate genomes and other groups of organisms with VISTA Browser, submit their own sequences of interest to several VISTA servers for various types of comparative analysis, and obtain detailed comparative analysis results for a set of cardiovascular genes. We illustrate capabilities of the VISTA site by the analysis of a 180 kilobase (kb) interval on human chromosome 5 that encodes for the kinesin family member3A (KIF3A) protein.

Frazer, Kelly A.; Pachter, Lior; Poliakov, Alexander; Rubin,Edward M.; Dubchak, Inna

2004-01-01T23:59:59.000Z

436

Forensic Science  

Science Journals Connector (OSTI)

Promega's DNA IQ extraction method has been automated on the Beckman 2000 robot workstation and implemented into forensic casework by the Virginia Division of Forensic Science (39). ... Hairs, Fibers, Glass, and Paint. ... A study was undertaken to assess the distinctiveness of automotive paints (308). ...

T. A. Brettell; J. M. Butler; R. Saferstein

2005-05-19T23:59:59.000Z

437

Molecular Science Computing | EMSL  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Scientific Capabilities Molecular Science Computing Overview Cell Isolation and Systems Analysis Deposition and Microfabrication Mass Spectrometry Microscopy Molecular Science...

438

Physical mapping of complex genomes  

DOE Patents [OSTI]

Method for simultaneous identification of overlapping cosmid clones among multiple cosmid clones and the use of the method for mapping complex genomes are provided. A library of cosmid clones that contains the DNA to be mapped is constructed and arranged in a manner such that individual clones can be identified and replicas of the arranged clones prepared. In preferred embodiments, the clones are arranged in a two dimensional matrix. In such embodiments, the cosmid clones in a row are pooled, mixed probes complementary to the ends of the DNA inserts int he pooled clones are synthesized, hybridized to a first replica of the library. Hybridizing clones, which include the pooled row, are identified. A second portion of clones is prepared by pooling cosmid clones that correspond to a column in the matrix. The second pool thereby includes one clone from the first portion pooled clones. This common clone is located on the replica at the intersection of the column and row. Mixed probes complementary to the ends of the DNA inserts in the second pooled portion of clones are prepared and hybridized to a second replica of the library. The hybridization pattern on the first and second replicas of the library are compared and cross-hybridizing clones, other than the clones in the pooled column and row, that hybridize to identical clones in the first and second replicas are identified. These clones necessarily include DNA inserts that overlap with the DNA insert int he common clone located at the intersection of the pooled row and pooled column. The DNA in the entire library may be mapped by pooling the clones in each of the rows and columns of the matrix, preparing mixed end-specific probes and hybridizing the probes from each row or column to a replica of the library. Since all clones in the library are located at the intersection of a column and a row, the overlapping clones for all clones in the library may be identified and a physical map constructed. In other preferred embodiments, the cosmid clones are arranged in a three dimensional matrix, pooled and compared in threes according to intersecting planes of the three dimensional matrix. Arrangements corresponding to geometries of higher dimensions may also be prepared and used to simultaneously identify overlapping clones in highly complex libraries with relatively few hybridization reactions.

Evans, Glen A. (Encinitas, CA)

1993-01-01T23:59:59.000Z

439

Physical mapping of complex genomes  

DOE Patents [OSTI]

A method for the simultaneous identification of overlapping cosmid clones among multiple cosmid clones and the use of the method for mapping complex genomes are provided. A library of cosmid clones that contains the DNA to be mapped is constructed and arranged in a manner such that individual clones can be identified and replicas of the arranged clones prepared. In preferred embodiments, the clones are arranged in a two dimensional matrix. In such embodiments, the cosmid clones in a row are pooled, mixed probes complementary to the ends of the DNA inserts in the pooled clones are synthesized, hybridized to a first replica of the library. Hybridizing clones, which include the pooled row, are identified. A second portion of clones is prepared by pooling cosmid clones that correspond to a column in the matrix. The second pool thereby includes one clone from the first portion pooled clones. This common clone is located on the replica at the intersection of the column and row. Mixed probes complementary to the ends of the DNA inserts in the second pooled portion of clones are prepared and hybridized to a second replica of the library. The hybridization pattern on the first and second replicas of the library are compared and cross-hybridizing clones, other than the clones in the pooled column and row, that hybridize to identical clones in the first and second replicas are identified. These clones necessarily include DNA inserts that overlap with the DNA insert in the common clone located at the intersection of the pooled row and pooled column. The DNA in the entire library may be mapped by pooling the clones in each of the rows and columns of the matrix, preparing mixed end-specific probes and hybridizing the probes from each row or column to a replica of the library. Since all clones in the library are located at the intersection of a column and a row, the overlapping clones for all clones in the library may be identified and a physical map constructed.

Evans, G.A.

1993-06-15T23:59:59.000Z

440

DOUBLE MAJORS Imaging Science + ...  

E-Print Network [OSTI]

DOUBLE MAJORS Imaging Science + ... Applied Mathematics Biomedical Sciences Computer Science Undergraduate Research Internships and Cooperative Education (Co-op) (optional) Study Abroad WHY IMAGING SCIENCE Science: BS, MS, PhD Color Science: MS, PhD BS + MS/PhD Combos HUMAN VISION BIO- MEDICAL ASTRO- PHYSICS

Zanibbi, Richard

Note: This page contains sample records for the topic "bssd genomic science" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


441

Standards for a new genomic era  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Standards for new genomic era Standards for new genomic era Standards for a new genomic era A team of geneticists has recently proposed a set of standards designed to elucidate the quality of publicly available genetic sequencing information. October 21, 2009 Los Alamos National Laboratory sits on top of a once-remote mesa in northern New Mexico with the Jemez mountains as a backdrop to research and innovation covering multi-disciplines from bioscience, sustainable energy sources, to plasma physics and new materials. Los Alamos National Laboratory sits on top of a once-remote mesa in northern New Mexico with the Jemez mountains as a backdrop to research and innovation covering multi-disciplines from bioscience, sustainable energy sources, to plasma physics and new materials. Contact

442

Sequencing and comparing whole mitochondrial genomes ofanimals  

SciTech Connect (OSTI)

Comparing complete animal mitochondrial genome sequences is becoming increasingly common for phylogenetic reconstruction and as a model for genome evolution. Not only are they much more informative than shorter sequences of individual genes for inferring evolutionary relatedness, but these data also provide sets of genome-level characters, such as the relative arrangements of genes, that can be especially powerful. We describe here the protocols commonly used for physically isolating mtDNA, for amplifying these by PCR or RCA, for cloning,sequencing, assembly, validation, and gene annotation, and for comparing both sequences and gene arrangements. On several topics, we offer general observations based on our experiences to date with determining and comparing complete mtDNA sequences.

Boore, Jeffrey L.; Macey, J. Robert; Medina, Monica

2005-04-22T23:59:59.000Z

443

Chapter 2 - Genomics-Based Cancer Theranostics  

Science Journals Connector (OSTI)

Cancer cells have advantages over normal cells of selective growth and survival, and genetic mutations are the root of those advantages. Over the past decade, especially since the advent of next generation sequencing (NGS) technologies, also known as second generation, in the mid-2000s, genomic landscapes for the most common forms of human cancer have been revealed, and such discoveries are benefiting early tumor diagnosis, prognosis, and treatments. Today, third generation sequencing platforms are entering the markets and bringing a new wave of discoveries as they allow a much longer sequencing read than the second generation platforms. This chapter reviews the advanced biotechnology and computational biology efforts necessary to make sense of the astronomical amount of cancer genomics data to identify novel biomarkers for developing targeted imaging probes and therapeutics, and clarify the achievements, opportunities, and challenges for genomics-based cancer theranostics.

Zheng Yin; James J. Mancuso; Fuhai Li; Stephen T.C. Wong

2014-01-01T23:59:59.000Z

444

Multiple Whole Genome Alignments Without a Reference Organism  

SciTech Connect (OSTI)

Multiple sequence alignments have become one of the most commonly used resources in genomics research. Most algorithms for multiple alignment of whole genomes rely either on a reference genome, against which all of the other sequences are laid out, or require a one-to-one mapping between the nucleotides of the genomes, preventing the alignment of recently duplicated regions. Both approaches have drawbacks for whole-genome comparisons. In this paper we present a novel symmetric alignment algorithm. The resulting alignments not only represent all of the genomes equally well, but also include all relevant duplications that occurred since the divergence from the last common ancestor. Our algorithm, implemented as a part of the VISTA Genome Pipeline (VGP), was used to align seven vertebrate and sixDrosophila genomes. The resulting whole-genome alignments demonstrate a higher sensitivity and specificity than the pairwise alignments previously available through the VGP and have higher exon alignment accuracy than comparable public whole-genome alignments. Of the multiple alignment methods tested, ours performed the best at aligning genes from multigene families?perhaps the most challenging test for whole-genome alignments. Our whole-genome multiple alignments are available through the VISTA Browser at http://genome.lbl.gov/vista/index.shtml.

Dubchak, Inna; Poliakov, Alexander; Kislyuk, Andrey; Brudno, Michael

2009-01-16T23:59:59.000Z

445

Genomes to life project quarterly report June 2004.  

SciTech Connect (OSTI)

This SAND report provides the technical progress through June 2004 of the Sandia-led project, ''Carbon Sequestration in Synechococcus Sp.: From Molecular Machines to Hierarchical Modeling'', funded by the DOE Office of Science Genomes to Life Program. Understanding, predicting, and perhaps manipulating carbon fixation in the oceans has long been a major focus of biological oceanography and has more recently been of interest to a broader audience of scientists and policy makers. It is clear that the oceanic sinks and sources of CO{sub 2} are important terms in the global environmental response to anthropogenic atmospheric inputs of CO{sub 2} and that oceanic microorganisms play a key role in this response. However, the relationship between this global phenomenon and the biochemical mechanisms of carbon fixation in these microorganisms is poorly understood. In this project, we will investigate the carbon sequestration behavior of Synechococcus Sp., an abundant marine cyanobacteria known to be important to environmental responses to carbon dioxide levels, through experimental and computational methods. This project is a combined experimental and computational effort with emphasis on developing and applying new computational tools and methods. Our experimental effort will provide the biology and data to drive the computational efforts and include significant investment in developing new experimental methods for uncovering protein partners, characterizing protein complexes, identifying new binding domains. We will also develop and apply new data measurement and statistical methods for analyzing microarray experiments. Computational tools will be essential to our efforts to discover and characterize the function of the molecular machines of Synechococcus. To this end, molecular simulation methods will be coupled with knowledge discovery from diverse biological data sets for high-throughput discovery and characterization of protein-protein complexes. In addition, we will develop a set of novel capabilities for inference of regulatory pathways in microbial genomes across multiple sources of information through the integration of computational and experimental technologies. These capabilities will be applied to Synechococcus regulatory pathways to characterize their interaction map and identify component proteins in these pathways. We will also investigate methods for combining experimental and computational results with visualization and natural language tools to accelerate discovery of regulatory pathways. The ultimate goal of this effort is develop and apply new experimental and computational methods needed to generate a new level of understanding of how the Synechococcus genome affects carbon fixation at the global scale. Anticipated experimental and computational methods will provide ever-increasing insight about the individual elements and steps in the carbon fixation process, however relating an organism's genome to its cellular response in the presence of varying environments will require systems biology approaches. Thus a primary goal for this effort is to integrate the genomic data generated from experiments and lower level simulations with data from the existing body of literature into a whole cell model. We plan to accomplish this by developing and applying a set of tools for capturing the carbon fixation behavior of complex of Synechococcus at different levels of resolution. Finally, the explosion of data being produced by high-throughput experiments requires data analysis and models which are more computationally complex, more heterogeneous, and require coupling to ever increasing amounts of experimentally obtained data in varying formats. These challenges are unprecedented in high performance scientific computing and necessitate the development of a companion computational infrastructure to support this effort.

Heffelfinger, Grant S.

2005-01-01T23:59:59.000Z

446

Mathematical methods for protein science  

SciTech Connect (OSTI)

Understanding the structure and function of proteins is a fundamental endeavor in molecular biology. Currently, over 100,000 protein sequences have been determined by experimental methods. The three dimensional structure of the protein determines its function, but there are currently less than 4,000 structures known to atomic resolution. Accordingly, techniques to predict protein structure from sequence have an important role in aiding the understanding of the Genome and the effects of mutations in genetic disease. The authors describe current efforts at Sandia to better understand the structure of proteins through rigorous mathematical analyses of simple lattice models. The efforts have focused on two aspects of protein science: mathematical structure prediction, and inverse protein folding.

Hart, W.; Istrail, S.; Atkins, J. [Sandia National Labs., Albuquerque, NM (United States)

1997-12-31T23:59:59.000Z

447

Understanding our Genetic Inheritance: The U.S. Human Genome Project, The First Five Years FY 1991--1995  

DOE R&D Accomplishments [OSTI]

The Human Genome Initiative is a worldwide research effort with the goal of analyzing the structure of human DNA and determining the location of the estimated 100,000 human genes. In parallel with this effort, the DNA of a set of model organisms will be studied to provide the comparative information necessary for understanding the functioning of the human genome. The information generated by the human genome project is expected to be the source book for biomedical science in the 21st century and will by of immense benefit to the field of medicine. It will help us to understand and eventually treat many of the more than 4000 genetic diseases that affect mankind, as well as the many multifactorial diseases in which genetic predisposition plays an important role. A centrally coordinated project focused on specific objectives is believed to be the most efficient and least expensive way of obtaining this information. The basic data produced will be collected in electronic databases that will make the information readily accessible on convenient form to all who need it. This report describes the plans for the U.S. human genome project and updates those originally prepared by the Office of Technology Assessment (OTA) and the National Research Council (NRC) in 1988. In the intervening two years, improvements in technology for almost every aspect of genomics research have taken place. As a result, more specific goals can now be set for the project.

1990-04-00T23:59:59.000Z

448

Nuclear Science and Engineering | ornl.gov  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Supporting Organizations Nuclear Science Engineering Nuclear Science Home | Science & Discovery | Nuclear Science | Supporting Organizations | Nuclear Science Engineering SHARE...

449

Justice and the Human Genome Project  

Science Journals Connector (OSTI)

...Justice and the Human Genome Project is a concise book, easily read on a late night or weekend. It will be of interest to all medical practitioners who care for patients who require genetic testing. In a broader sense, the issues of social equity and individual liberties are relevant to everyone. For... Justice and the Human Genome Project is a collection of essays based on presentations at a conference with the same title sponsored by the Department of Energy and the University of Illinois at Chicago in November 1991. The Ethical, Legal, and Social ...

Lee G.

1995-02-23T23:59:59.000Z

450

Identifying Recent Adaptations in Large-Scale Genomic Data  

E-Print Network [OSTI]

Although several hundred regions of the human genome harbor signals of positive natural selection, few of the relevant adaptive traits and variants have been elucidated. Using full-genome sequence variation from the 1000 ...

Andersen, KristianG.

451

?-RA: a parallel sparse index for genomic read alignment  

E-Print Network [OSTI]

Background Genomic read alignment involves mapping (exactly or approximately) short reads from a particular individual onto a pre-sequenced reference genome of the same species. Because all individuals of the same species ...

Kü lekci, M O?uzhan; Hon, Wing-Kai; Shah, Rahul; Vitter, Jeffrey Scott; Xu, Bojian

2011-07-27T23:59:59.000Z

452

MycoCosm, an Integrated Fungal Genomics Resource  

SciTech Connect (OSTI)

MycoCosm is a web-based interactive fungal genomics resource, which was first released in March 2010, in response to an urgent call from the fungal community for integration of all fungal genomes and analytical tools in one place (Pan-fungal data resources meeting, Feb 21-22, 2010, Alexandria, VA). MycoCosm integrates genomics data and analysis tools to navigate through over 100 fungal genomes sequenced at JGI and elsewhere. This resource allows users to explore fungal genomes in the context of both genome-centric analysis and comparative genomics, and promotes user community participation in data submission, annotation and analysis. MycoCosm has over 4500 unique visitors/month or 35000+ visitors/year as well as hundreds of registered users contributing their data and expertise to this resource. Its scalable architecture allows significant expansion of the data expected from JGI Fungal Genomics Program, its users, and integration with external resources used by fungal community.

Shabalov, Igor; Grigoriev, Igor

2012-03-16T23:59:59.000Z

453

Volume Visualization of Multiple Alignment of Large Genomic DNA  

E-Print Network [OSTI]

. Another approach to understanding genetic code is through comparison of genomes, or parts of genomes/conservation between positions (http://www.cryst.bbk.ac.uk/BCD/bcdgloss.html). Figure 1 shows an example of a multiple

Utah, University of

454

The Human Genome Initiative of the Department of Energy  

DOE R&D Accomplishments [OSTI]

The structural characterization of genes and elucidation of their encoded functions have become a cornerstone of modern health research, biology and biotechnology. A genome program is an organized effort to locate and identify the functions of all the genes of an organism. Beginning with the DOE-sponsored, 1986 human genome workshop at Santa Fe, the value of broadly organized efforts supporting total genome characterization became a subject of intensive study. There is now national recognition that benefits will rapidly accrue from an effective scientific infrastructure for total genome research. In the US genome research is now receiving dedicated funds. Several other nations are implementing genome programs. Supportive infrastructure is being improved through both national and international cooperation. The Human Genome Initiative of the Department of Energy (DOE) is a focused program of Resource and Technology Development, with objectives of speeding and bringing economies to the national human genome effort. This report relates the origins and progress of the Initiative.

1988-00-00T23:59:59.000Z

455

JGI Genomics and Bioinformatics for Undergraduate Educators Workshop |  

Broader source: Energy.gov (indexed) [DOE]

JGI Genomics and Bioinformatics for Undergraduate Educators JGI Genomics and Bioinformatics for Undergraduate Educators Workshop JGI Genomics and Bioinformatics for Undergraduate Educators Workshop March 23, 2013 3:00PM EDT to March 26, 2013 6:00PM EDT University of California The JGI will be holding the JGI Genomics and Bioinformatics for Undergraduate Educators Workshop in conjunction with the JGI User Meeting. The workshop will take place March 23-26, 2013 at the JGI. The DOE Joint Genome Institute's Education Program is providing opportunities for colleges and universities across the country to "interpret" bacterial genomes, such as those sequenced as part of the GEBA project, for analysis. This "Interpret a GEBA Genome" Education Program makes available a selection of recently sequenced genomes

456

Defining functional DNA elements in the human genome  

E-Print Network [OSTI]

With the completion of the human genome sequence, attention turned to identifying and annotating its functional DNA elements. As a complement to genetic and comparative genomics approaches, the Encyclopedia of DNA Elements ...

Kellis, Manolis

457

Comparative gene identification in mammalian, fly, and fungal genomes  

E-Print Network [OSTI]

An important step in genome interpretation is the accurate identification of protein-coding genes. One approach to gene identification is comparative analysis of the genomes of several related species, to find genes that ...

Lin, Michael F. (Michael Fong-Jay)

2006-01-01T23:59:59.000Z

458

Applied Science  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Geological Sciences Geological Sciences Atomic-scale structure of the orthoclase (001)-water interface measured with high-resolution x-ray reflectivity P. Fenter, H. Teng, P. Geissbühler, J.M. Hanchar, K.L. Nagy, and N.C. Sturchio Chemical analysis of individual interplanetary dust particles G.J. Flynn, S.R. Sutton, M. Rivers, P. Eng, and M. Newville Diffusion-limited biotransformation of metal contaminants in soils/sediments: chromium T. Tokunaga, J. Wan, D. Joyner, T. Hazen, M. Firestone, E. Schwartz, S. Sutton, and M. Newville Investigation of meteorite porosity by computed microtomography G.J. Flynn, M. Rivers, and S.R. Sutton Microscale imaging of pore structure in hydrothermal sulfide chimneys using synchrotron x-ray computed tomography P. O'Day, J. Muccino, S. Thompson, M.Jew, and J. Holloway

459

Science Highlights  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Highlights Highlights Science Highlights Science highlights feature research conducted by staff and users at the ALS. If a Power Point summary slide or a PDF handout of the highlight is available, you will find it linked beneath the highlight listing and on the highlight's page. You may also print a version of a highlight by clicking the print icon associated with each highlight. The Molecular Ingenuity of a Unique Fish Scale Print Monday, 25 November 2013 12:06 ALS research has shown how the scales of a freshwater fish found in the Amazon Basin can literally re-orient themselves in real time to resist force, in essence creating an adaptable body armor. Read more... New Research on Jamming Behavior Expands Understanding Print Tuesday, 22 October 2013 00:00 Recent ALS research has revealed that even magnetic domains behave very much like other granular material systems, and their dynamical behavior mimics the universal characteristics of several jammed systems.

460

Applied Science  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

Applied Science Applied Science Correlation of predicted and measured iron oxidation states in mixed iron oxides H. D. Rosenfeld and W. L. Holstein Development of a quantitative measurement of a diesel spray core using synchrotron x-rays C.F. Powell, Y. Yue, S. Gupta, A. McPherson, R. Poola, and J. Wang Localized phase transformations by x-ray-induced heating R.A. Rosenberg, Q. Ma, W. Farrell, E.D. Crozier, G.J. Soerensen, R.A. Gordon, and D.-T. Jiang Resonant x-ray scattering at the Se edge in ferroelectric liquid crystal materials L. Matkin, H. Gleeson, R. Pindak, P. Mach, C. Huang, G. Srajer, and J. Pollmann Synchrotron-radiation-induced anisotropic wet etching of GaAs Q. Ma, D.C. Mancini, and R.A. Rosenberg Synchrotron-radiation-induced, selective-area deposition of gold on

Note: This page contains sample records for the topic "bssd genomic science" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


461

Prediction of effective genome size in metagenomic samples  

Science Journals Connector (OSTI)

A novel computational approach shows a link between genome size and habitat from analysis of environmental metagenomic DNA reads.

Jeroen Raes; Jan O Korbel; Martin J Lercher; Christian von Mering; Peer Bork

2007-01-15T23:59:59.000Z

462

E-Print Network 3.0 - arabinosylcytosin pharmacogenomics genome...  

Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

We illustrate Source: Imoto, Seiya - Laboratory of DNA Information Analysis, Human Genome Center, University of Tokyo. Collection: Computer Technologies and...

463

Translating the cancer genome: Going beyond p values  

E-Print Network [OSTI]

Mining the complex cancer (epi)genome for aberrations governing these processes has become a major activity

Chin, Lynda

2008-01-01T23:59:59.000Z

464

College of Health Sciences Health Sciences Connection  

E-Print Network [OSTI]

College of Health Sciences Health Sciences Connection 1 Dean's Message College of Health Sciences Health Sciences Connection December 2009 January 2010 Volume VIII (5) Moving from the Superficial the superficial level so that the result is the formation of deep relationships, caring, compassion, justice, love

Barrash, Warren

465

College of Health Sciences Health Sciences Connection  

E-Print Network [OSTI]

today. In politics, in education, in health care, in society in general we are so turned inwardCollege of Health Sciences Health Sciences Connection 1 Dean's Message College of Health Sciences Health Sciences Connection April/May 2010 Volume VIII (8) WOW! Spring semester of 2010 is almost

Barrash, Warren

466

College of Health Sciences Health Sciences Connection  

E-Print Network [OSTI]

College of Health Sciences Health Sciences Connection 1 Dean's Message College of Health Sciences Health Sciences Connection April 2011 Volume IX (4) The end of the spring semester is quickly approaching accreditation review. Similarly, the Environmental and Occupational Health program also had a very positive

Barrash, Warren

467

Political Science The School of Social Sciences  

E-Print Network [OSTI]

242 Political Science The School of Social Sciences Degrees Offered: BA, MA, PhD Students majoring in political science are encouraged to achieve both a broad understanding of the field and a specialized knowledge of one or more aspects of political science,including American politics and comparative politics

Richards-Kortum, Rebecca

468

Political Science The School of Social Sciences  

E-Print Network [OSTI]

217 Political Science The School of Social Sciences Chair T. Clifton Morgan Professors John S.D. Students majoring in political science are encouraged to achieve both a broad understanding of the field and a specialized knowledge of one or more aspects of political science, including American and comparative politics

Richards-Kortum, Rebecca

469

Political Science The School of Social Sciences  

E-Print Network [OSTI]

1 Political Science The School of Social Sciences Degrees Offered: BA, MA, PhD Students majoring in political science are encouraged to achieve both a broad understanding of the field and a specialized knowledge of one or more aspects of political science, including American politics and comparative politics

Richards-Kortum, Rebecca

470

Political Science The School of Social Sciences  

E-Print Network [OSTI]

264 Political Science The School of Social Sciences Degrees Offered: BA, MA, PhD Students majoring in political science are encouraged to achieve both a broad understanding of the field and a specialized knowledge of one or more aspects of political science, including American politics and comparative politics

Richards-Kortum, Rebecca

471

Political Science The School of Social Sciences  

E-Print Network [OSTI]

235 Political Science The School of Social Sciences Chair T. Clifton Morgan Professors John S.D. Students majoring in political science are encouraged to achieve both a broad understanding of the field and a specialized knowledge of one or more aspects of political science, including American and comparative politics

Richards-Kortum, Rebecca

472

Political Science The School of Social Sciences  

E-Print Network [OSTI]

Political Science The School of Social Sciences Degrees Offered: BA, MA, PhD Students majoring in political science are encouraged to achieve both a broad understanding of the field and a specialized knowledge of one or more aspects of political science, including American politics and comparative politics

Richards-Kortum, Rebecca

473

Political Science The School of Social Sciences  

E-Print Network [OSTI]

242 Political Science The School of Social Sciences Chair T. Clifton Morgan Professors Earl Black.D. Students majoring in political science are encouraged to achieve both a broad understanding of the field and a specialized knowledge of one or more aspects of political science, including American and comparative politics

Richards-Kortum, Rebecca

474

Political Science The School of Social Sciences  

E-Print Network [OSTI]

253 Political Science The School of Social Sciences Degrees Offered: BA, MA, PhD Students majoring in political science are encouraged to achieve both a broad understanding of the field and a specialized knowledge of one or more aspects of political science, including American politics and comparative politics

Richards-Kortum, Rebecca

475

[Faculty of Science Information and Computing Sciences  

E-Print Network [OSTI]

[Faculty of Science Information and Computing Sciences] Indexed fixed points Andres Löh Dept. of Information and Computing Sciences, Utrecht University P.O. Box 80.089, 3508 TB Utrecht, The Netherlands Web pages: http://www.cs.uu.nl/wiki/Center GP meeting, 21 November 2008 #12;[Faculty of Science Information

Löh, Andres

476

[Faculty of Science Information and Computing Sciences  

E-Print Network [OSTI]

[Faculty of Science Information and Computing Sciences] Generic diff Andres Löh joint work with Eelco Lempsink and Sean Leather Dept. of Information and Computing Sciences, Utrecht University IFIP WG 2.1 meeting #64, Weltenburg, April 2, 2009 #12;[Faculty of Science Information and Computing

Löh, Andres

477

[Faculty of Science Information and Computing Sciences  

E-Print Network [OSTI]

[Faculty of Science Information and Computing Sciences] Generic programming with fixed points Dept. of Information and Computing Sciences, Utrecht University P.O. Box 80.089, 3508 TB Utrecht, The Netherlands Web pages: http://www.cs.uu.nl/wiki/Center September 2, 2009 #12;[Faculty of Science Information

Löh, Andres

478

[Faculty of Science Information and Computing Sciences  

E-Print Network [OSTI]

[Faculty of Science Information and Computing Sciences] Generic programming with the multirec. of Information and Computing Sciences, Utrecht University P.O. Box 80.089, 3508 TB Utrecht, The Netherlands Web pages: http://www.cs.uu.nl/wiki/Center May 15, 2009 #12;[Faculty of Science Information and Computing

Löh, Andres

479

Translating Anatomical Structures and Functional Genomics of Candidatus Liberibacter asiaticus and solanacearum Into Circulative, Propagative Vector-Mediated Transmission Processes  

E-Print Network [OSTI]

and Functional Genomics of Candidatus Liberibacter asiaticusinvolving functional genomics and anatomical localization of

2014-01-01T23:59:59.000Z

480

Reconstructing the Genomic Architecture of Ancestral Mammals: Lessons From Human,  

E-Print Network [OSTI]

Reconstructing the Genomic Architecture of Ancestral Mammals: Lessons From Human, Mouse, and Rat Genomes Guillaume Bourque,1 Pavel A. Pevzner,2 and Glenn Tesler3,4 1 Centre de Recherches Mathe of Mathematics, University of California­San Diego, La Jolla, California 92093, USA Recent analysis of genome

Batzoglou, Serafim

Note: This page contains sample records for the topic "bssd genomic science" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.


481

Proof and evolutionary analysis of ancient genome duplication in the  

E-Print Network [OSTI]

Proof and evolutionary analysis of ancient genome duplication in the yeast Saccharomyces cerevisiae ........................................................................................................................................................................................................................... Whole-genome duplication followed by massive gene loss and specialization has long been postulated by searching complete genome sequence for signs of ancient duplication. Here, we show that the yeast

Kellis, Manolis

482

Genome Rearrangement: A Planning Approach Tansel Uras and Esra Erdem  

E-Print Network [OSTI]

Genome Rearrangement: A Planning Approach Tansel Uras and Esra Erdem Faculty of Engineering be reconstructed by pair- wise comparison of their entire genomes. Such a comparison can be quantified by determining the number of events that change the order of genes in a genome. Earlier Erdem and Tillier

Erdem, Esra

483

Genome Rearrangement and Planning: Revisited Tansel Uras and Esra Erdem  

E-Print Network [OSTI]

Genome Rearrangement and Planning: Revisited Tansel Uras and Esra Erdem Faculty of Engineering be reconstructed by pair- wise comparison of their entire genomes. Such a comparison can be quantified by determining the number of events that change the order of genes in a genome. Earlier Erdem and Tillier

Erdem, Esra

484

Rearrangements in genomes with centromeres part I: translocations  

E-Print Network [OSTI]

Rearrangements in genomes with centromeres part I: translocations Michal Ozery-Flato and Ron Shamir. Every new chromosome created by a genome rearrange- ment event must have a centromere in order to survive. This constraint has been ignored in the computational modeling and analysis of genome

Shamir, Ron

485

A Comparative Evaluation of XML Difference Algorithms with Genomic Data  

E-Print Network [OSTI]

A Comparative Evaluation of XML Difference Algorithms with Genomic Data Cornelia Hedeler and Norman, UK {chedeler,npaton}@cs.manchester.ac.uk Abstract. Genome sequence data and annotations are subject difference algorithms, namely X-Diff, JXyDiff and 3DM, can be used to identify and document genome changes

Paton, Norman

486

The Exemplar Breakpoint Distance for nontrivial genomes cannot be approximated  

E-Print Network [OSTI]

The Exemplar Breakpoint Distance for non­trivial genomes cannot be approximated Guillaume Blin 1 ­ France guillaume.fertin@univ­nantes.fr Abstract. A promising and active field of comparative genomics con­ sists in comparing two genomes by establishing a one­to­one correspon­ dence (i.e., a matching) between

Fertin, Guillaume

487

Genome Rearrangement and Planning Institute of Information Systems  

E-Print Network [OSTI]

Genome Rearrangement and Planning Esra Erdem Institute of Information Systems Vienna University Avenue, Toronto, Canada e.tillier@utoronto.ca Abstract The genome rearrangement problem is to find the most eco­ nomical explanation for observed differences between the gene orders of two genomes

Erdem, Esra

488

Dissecting ant recognition systems in the age of genomics  

Science Journals Connector (OSTI)

...ant recognition systems in the age of genomics Neil D. Tsutsui e-mail: ntsutsui...and molecular biology. Formicidae|genomics|chemosensory receptors|cuticular...have been rapid advances in genetics and genomics, for both social insects and model organisms...

2013-01-01T23:59:59.000Z

489

The regulatory genome and the computer Sorin Istrail a  

E-Print Network [OSTI]

Review The regulatory genome and the computer Sorin Istrail a , Smadar Ben-Tabou De-Leon b , Eric H cis-regulatory control modules in an animal genome is their information processing capability and software. The genomic computer controls spatial gene expression in the development of the body plan

Istrail, Sorin

490

Reconciling Utility with Privacy in Genomics Mathias Humbert Erman Ayday  

E-Print Network [OSTI]

Reconciling Utility with Privacy in Genomics Mathias Humbert Erman Ayday Jean-Pierre Hubaux.telenti@chuv.ch ABSTRACT Direct-to-consumer genetics makes it possible for everyone to obtain their genome sequences. In order to contribute to medical research, a growing number of people publish their genomic data

Thévenaz, Jacques

491

Reconstructing large regions of an ancestral mammalian genome in silico  

E-Print Network [OSTI]

of California, Santa Cruz, California 95064, USA; 2 National Human Genome Research Institute, National.ucsc.edu/ancestors.] Following completion of the human genome sequence, there is now considerable interest in obtaining a more comprehensive understanding of its evolution (International Human Genome Sequencing Consortium [IHGSC] 2001

Miller, Webb

492

Characterization of Evolutionary Rates and Constraints in Three Mammalian Genomes  

E-Print Network [OSTI]

of microevolutionary phenomena that have shaped the human, mouse, and rat genomes since their last common ancestor. We are distinct. Finally, we have identified those regions in the human genome that are evolving slowly, which are likely to include functional elements important to human biology. At least 5% of the human genome

Batzoglou, Serafim

493

Facilitating Transformations in a Human Genome Project Database  

E-Print Network [OSTI]

Facilitating Transformations in a Human Genome Project Database S. B. Davidson, A. S. Kosky Dept: Susan B. Davidson, Phone (215) 898-3490, Fax (215) 898-0587 Abstract Human Genome Project databases common to laboratory notebook databases, within the Human Genome Project as well as within the broader

Pennsylvania, University of

494

Applying Logic Programming to Derive Novel Functional Information of Genomes  

E-Print Network [OSTI]

Applying Logic Programming to Derive Novel Functional Information of Genomes Arvind K. Bansal1, and to enhance the effects of useful bacteria. It is anticipated that the complete human genome will be fully to develop tools to understand human genome components: the functionality of genes and an understanding

Bansal, Arvind K.

495

On the sequencing of the human genome Robert H. Waterston*  

E-Print Network [OSTI]

. The international Human Ge- nome Project (HGP) used the hierarchical shotgun approach, whereas Celera Genomics. One was the product of the international Human Genome Project (HGP), and the other was the productOn the sequencing of the human genome Robert H. Waterston* , Eric S. Lander , and John E. Sulston

Batzoglou, Serafim

496

Approximate Bayesian Computations Done Exactly: Towards a Thousand Human Genomes  

E-Print Network [OSTI]

Approximate Bayesian Computations Done Exactly: Towards a Thousand Human Genomes Principal of California, Irvine, USA January 28, 2011 Abstract Currently, 1000 whole human genomes are being sequenced. It is becoming exceedingly difficult to extract critical information from such extensive population-level genomic

Sainudiin, Raazesh

497

The Human Genome Project, a 13-year international collaborative  

E-Print Network [OSTI]

The Human Genome Project, a 13- year international collaborative effort, reached a major milestone in April 2003 with the release of the first reference sequence for the human genome. This finished sequence access by the research community to the most com- plete genome draft. Now, the finished refer- ence human

Levin, Judith G.

498

Using Aggregate Human Genome Data for Individual Identification  

E-Print Network [OSTI]

Using Aggregate Human Genome Data for Individual Identification Yue Wang, Xintao Wu, Xinghua Shi. For example, 1000 genome project [2] provides the public with free services like browsing and downloading DNA,x.shi}@uncc.edu Abstract--Data privacy in genome-wide association studies (GWAS) is a critical yet under-exploited research

Wu, Xintao

499

A Map of Recent Positive Selection in the Human Genome  

E-Print Network [OSTI]

information about the adaptation of modern humans to local conditions. We report here on a genome-wide scanA Map of Recent Positive Selection in the Human Genome Benjamin F. Voight[ , Sridhar Kudaravalli BF, Kudaravalli S, Wen X, Pritchard JK (2006) A map of recent positive selection in the human genome

Nachman, Michael

500

Prediction of Complete Gene Structures in Human Genomic DNA  

E-Print Network [OSTI]

and RNA splicing. On the other hand, with the recent shift in the emphasis of the Human Genome ProjectPrediction of Complete Gene Structures in Human Genomic DNA Chris Burge* and Samuel Karlin model of the gene structure of human genomic sequences which incorporates descriptions of the basic

Shatkay, Hagit