Sample records for biology bcsb multiple-wavelength

  1. Tunnel junction multiple wavelength light-emitting diodes

    DOE Patents [OSTI]

    Olson, Jerry M. (Lakewood, CO); Kurtz, Sarah R. (Golden, CO)

    1992-01-01T23:59:59.000Z

    A multiple wavelength LED having a monolithic cascade cell structure comprising at least two p-n junctions, wherein each of said at least two p-n junctions have substantially different band gaps, and electrical connector means by which said at least two p-n junctions may be collectively energized; and wherein said diode comprises a tunnel junction or interconnect.

  2. Tunnel junction multiple wavelength light-emitting diodes

    DOE Patents [OSTI]

    Olson, J.M.; Kurtz, S.R.

    1992-11-24T23:59:59.000Z

    A multiple wavelength LED having a monolithic cascade cell structure comprising at least two p-n junctions, wherein each of said at least two p-n junctions have substantially different band gaps, and electrical connector means by which said at least two p-n junctions may be collectively energized; and wherein said diode comprises a tunnel junction or interconnect. 5 figs.

  3. Multiple-wavelength spectroscopic quantitation of light-absorbing species in scattering media

    DOE Patents [OSTI]

    Nathel, Howard (Albany, CA); Cartland, Harry E. (Livermore, CA); Colston, Jr., Billy W. (Livermore, CA); Everett, Matthew J. (Pleasanton, CA); Roe, Jeffery N. (San Ramon, CA)

    2000-01-01T23:59:59.000Z

    An oxygen concentration measurement system for blood hemoglobin comprises a multiple-wavelength low-coherence optical light source that is coupled by single mode fibers through a splitter and combiner and focused on both a target tissue sample and a reference mirror. Reflections from both the reference mirror and from the depths of the target tissue sample are carried back and mixed to produce interference fringes in the splitter and combiner. The reference mirror is set such that the distance traversed in the reference path is the same as the distance traversed into and back from the target tissue sample at some depth in the sample that will provide light attenuation information that is dependent on the oxygen in blood hemoglobin in the target tissue sample. Two wavelengths of light are used to obtain concentrations. The method can be used to measure total hemoglobin concentration [Hb.sub.deoxy +Hb.sub.oxy ] or total blood volume in tissue and in conjunction with oxygen saturation measurements from pulse oximetry can be used to absolutely quantify oxyhemoglobin [HbO.sub.2 ] in tissue. The apparatus and method provide a general means for absolute quantitation of an absorber dispersed in a highly scattering medium.

  4. Biology

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative1 First Use of Energy for All Purposes (Fuel and Nonfuel), 2002; Level: National5Sales for4,645 3,625govInstrumentstdmadapInactiveVisiting the TWP TWPAlumniComplexMaterialProductionBiological andU.S.Biology

  5. Biologic

    E-Print Network [OSTI]

    Louis H. Kauffman

    2002-04-03T23:59:59.000Z

    In this paper we explore the boundary between biology and the study of formal systems (logic). In the end, we arrive at a summary formalism, a chapter in "boundary mathematics" where there are not only containers but also extainers >protein folding and the basic structure of the Temperley Lieb algebra at the foundations of topological invariants of knots and links.

  6. Biology 494 Biology Internship

    E-Print Network [OSTI]

    Wurtele, Eve Syrkin

    Biology 494 Biology Internship Guidelines The Biology Program encourages students to seek out and participate in internship opportunities that have a clear biological focus. Internships may be arranged may receive credit in Biology 494 (Biology Internship) for participation in internships, regardless

  7. Biological Safety

    Broader source: Energy.gov [DOE]

    The DOE's Biological Safety Program provides a forum for the exchange of best practices, lessons learned, and guidance in the area of biological safety. This content is supported by the Biosurety Executive Team. The Biosurety Executive Team is a DOE-chartered group. The DOE Office of Worker Safety and Health Policy provides administrative support for this group. The group identifies biological safety-related issues of concern to the DOE and pursues solutions to issues identified.

  8. Systems Biology. | EMSL

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Biology. Systems Biology. Abstract: The biology revolution over the last 50 years has been driven by the ascendancy of molecular biology. This was enthusiastically embraced by most...

  9. Biological preconcentrator

    DOE Patents [OSTI]

    Manginell, Ronald P. (Albuquerque, NM); Bunker, Bruce C. (Albuquerque, NM); Huber, Dale L. (Albuquerque, NM)

    2008-09-09T23:59:59.000Z

    A biological preconcentrator comprises a stimulus-responsive active film on a stimulus-producing microfabricated platform. The active film can comprise a thermally switchable polymer film that can be used to selectively absorb and desorb proteins from a protein mixture. The biological microfabricated platform can comprise a thin membrane suspended on a substrate with an integral resistive heater and/or thermoelectric cooler for thermal switching of the active polymer film disposed on the membrane. The active polymer film can comprise hydrogel-like polymers, such as poly(ethylene oxide) or poly(n-isopropylacrylamide), that are tethered to the membrane. The biological preconcentrator can be fabricated with semiconductor materials and technologies.

  10. Bioinformatics & Computational Biology

    E-Print Network [OSTI]

    Richner, Heinz

    Bioinformatics & Computational Biology Master of Science in Bioinformatics and Computational Biology (90 ECTS) Contact Information Programme administration Bioinformatics and Computational Biology.unifr.ch/msc Programme administration Bioinformatics and Computational Biology University of Bern Baltzerstrasse 6 CH

  11. Multiple wavelength time-of-flight sensor based on time-correlated single-photon counting

    E-Print Network [OSTI]

    Buller, Gerald S.

    The optical system was based around a commercially available Meade LX200 catadioptric Schmidt a collection fiber and camera in the image plane of the telescope; and c optical routing: an optical routing demonstrated good performance at ranges of up to 17 km in daylight conditions. Analysis techniques were

  12. Biological Statistics and Computational Biology Seminar Series

    E-Print Network [OSTI]

    Keinan, Alon

    . Williams Professor of Biomedical Informations and Co-Director, Yale Computational Biology & Bioinformatics co-director of the Yale Computational Biology and Bioinformatics Program. In addition to the KeckBiological Statistics and Computational Biology Seminar Series Dr. Mark B. Gerstein Albert L

  13. Genomics-Bioinformatics Day: "Bioinformatics, Computational Biology, Systems Biology & Mathematical

    E-Print Network [OSTI]

    Goldschmidt, Christina

    3rd Genomics-Bioinformatics Day: "Bioinformatics, Computational Biology, Systems Biology on "Bioinformatics, Computational Biology, Systems Biology & Mathematical Biology: Their Relationship". Genomics, Bioinformatics, Computational Biology have a tremendous appeal and these fields have originated or grown

  14. Bioinformatics Computational Biology

    E-Print Network [OSTI]

    Mayfield, John

    Bioinformatics and Computational Biology Interdepartmental Graduate Program GRADUATE STUDENT HANDBOOK FALL 2006 Bioinformatics and Computational Biology Interdepartmental Graduate Program GRADUATE STUDENT HANDBOOK FALL 2006 #12;1 Welcome to the Bioinformatics and Computational Biology (BCB) program

  15. Biological Statistics and Computational Biology Seminar Series

    E-Print Network [OSTI]

    Keinan, Alon

    Science and the Center for Computational Biology and Bioinformatics at Columbia University. Dr. PeBiological Statistics and Computational Biology Seminar Series Dr. Itsik Pe'er Associate Professor of Computer Science Columbia University Itsik Pe'er is an associate professor in the Department of Computer

  16. Microfluidics for quantitative biology

    E-Print Network [OSTI]

    Adler, Micha

    2012-01-01T23:59:59.000Z

    CALIFORNIA, SAN DIEGO Microfluidics for Quantitative BiologyChapter 1: Microfluidics.………………………………………………………..… 1 1.1OF THE DISSERTATION Microfluidics for Quantitative Biology

  17. Genomics and Systems Biology

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Genomics and Systems Biology Genomics and Systems Biology Los Alamos scientists perform research in functional genomics and structural genomics, and applications for such work...

  18. 2003 Synthetic Biology study

    E-Print Network [OSTI]

    Endy, Drew

    2007-08-14T23:59:59.000Z

    Biology is a technology for processing information, materials, and energy. As a technology platform, biological systems provide access to artifacts and processes across a range of scales (e.g., the ribosome is a programmable ...

  19. Biological Systems Facilities

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    encompasses the areas of priority pathogen detection, extremophile biology and genomics, biohydrometallurgy, biomass conversion, coal bioprocessing, biodegradation...

  20. Process Manual Biological & Agricultural

    E-Print Network [OSTI]

    Boas, Harold P.

    · · · · ·t t ·t ·t t t ·t . ~ t · · Process· Manual Biological & Agricultural Engineering MANUAL FOR THE BIOLOGICAL AND AGRICULTURAL ENGINEERING DEPARTMENT TexasA&MUniversity Article I. NAME The name ofthis organization shall be the Biological and Agricultural Engineering Department (abbreviated

  1. Computational Biology & Bioinformatics

    E-Print Network [OSTI]

    Johnson, Marcia K.

    Computational Biology & Bioinformatics at Yale An Interdepartmental PhD Program and a Track within://www.yale.edu/graduateschool/admissions/apply_online.html 2 #12;Introduction Computational Biology and Bioinformatics (CBB) is a rapidly developing multi experimentation. Computational and theoretical approaches to understanding biological systems provide an essential

  2. Computational Biology & Bioinformatics

    E-Print Network [OSTI]

    Computational Biology & Bioinformatics at Yale An Interdepartmental PhD Program and a Track within://www.yale.edu/graduateschool/admissions/apply_online.html #12;3 Introduction Computational Biology and Bioinformatics (CBB) is a rapidly developing multi experimentation. Computational and theoretical approaches to understanding biological systems provide an essential

  3. Biological tracer method

    DOE Patents [OSTI]

    Strong-Gunderson, J.M.; Palumbo, A.V.

    1998-09-15T23:59:59.000Z

    The present invention is a biological tracer method for characterizing the movement of a material through a medium, comprising the steps of: introducing a biological tracer comprising a microorganism having ice nucleating activity into a medium; collecting at least one sample of the medium from a point removed from the introduction point; and analyzing the sample for the presence of the biological tracer. The present invention is also a method for using a biological tracer as a label for material identification by introducing a biological tracer having ice nucleating activity into a material, collecting a sample of a portion of the labelled material and analyzing the sample for the presence of the biological tracer. 2 figs.

  4. Biological tracer method

    DOE Patents [OSTI]

    Strong-Gunderson, Janet M. (Ten Mile, TN); Palumbo, Anthony V. (Oak Ridge, TN)

    1998-01-01T23:59:59.000Z

    The present invention is a biological tracer method for characterizing the movement of a material through a medium, comprising the steps of: introducing a biological tracer comprising a microorganism having ice nucleating activity into a medium; collecting at least one sample of the medium from a point removed from the introduction point; and analyzing the sample for the presence of the biological tracer. The present invention is also a method for using a biological tracer as a label for material identification by introducing a biological tracer having ice nucleating activity into a material, collecting a sample of a portion of the labelled material and analyzing the sample for the presence of the biological tracer.

  5. Biological detector and method

    DOE Patents [OSTI]

    Sillerud, Laurel; Alam, Todd M; McDowell, Andrew F

    2014-04-15T23:59:59.000Z

    A biological detector includes a conduit for receiving a fluid containing one or more magnetic nanoparticle-labeled, biological objects to be detected and one or more permanent magnets or electromagnet for establishing a low magnetic field in which the conduit is disposed. A microcoil is disposed proximate the conduit for energization at a frequency that permits detection by NMR spectroscopy of whether the one or more magnetically-labeled biological objects is/are present in the fluid.

  6. Genomics and Systems Biology

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Genomics and Systems Biology LANL leads the world in computational finishing of microbial genomes Read caption + In 2013, Los Alamos scientist Richard Sayre and his team...

  7. Biological and Environmental Research

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Focus Area team for Soil Metagenomics and Carbon Cycling develops and uses community genomics approaches to link the biological processes controlling belowground carbon storage...

  8. Roadmap: Environmental and Conservation Biology Conservation Biology Bachelor of Science

    E-Print Network [OSTI]

    Sheridan, Scott

    Roadmap: Environmental and Conservation Biology ­Conservation Biology Bachelor of Science [AS or upper division) 4 #12;Roadmap: Environmental and Conservation Biology ­Conservation Biology Bachelor Summary on page 2 Conservation Biology Concentration Elective 2 See note 3 on page 2 Semester Five: [15

  9. AGRICULTURAL AND BIOLOGICAL

    E-Print Network [OSTI]

    Gilbert, Matthew

    AGRICULTURAL AND BIOLOGICAL ENGINEERING UNDERGRADUATE PROGRAM Prepare... yourself for a career in integrating life and engineering for systems in agriculture, food, environment, and energy, and to contribute to the world's largest industry. COLLEGE OF ACES COLLEGE OF ENGINEERING #12;AGRICULTURAL AND BIOLOGICAL

  10. Human Embryology & Developmental Biology

    E-Print Network [OSTI]

    Levi, Ran

    Biology is the modern synthesis of biological and medical sciences that looks at how the tissues, and is at the forefront of recent advances in modern medicine. Current research has shown that many of the molecular Web Pages for names). The Head of School of Medical Sciences is always available for advice regarding

  11. Molecular Biology DEGREE PROGRAMME

    E-Print Network [OSTI]

    Levi, Ran

    to the course co-ordinator for that module (See University Catalogue of Courses or SMS World Wide Web Pages in molecular biology have a wide range of career options, including virtually all areas of biology, medicine with mastering statistics, graphics and word processing software packages. General Enquiries The Degree Programme

  12. Extracting information from biological networks

    E-Print Network [OSTI]

    Chindelevitch, Leonid Alexandrovich

    2010-01-01T23:59:59.000Z

    Systems biology, the study of biological systems in a holistic manner, has been catalyzed by a dramatic improvement in experimental techniques, coupled with a constantly increasing availability of biological data. The ...

  13. Master track Theoretical Biology & Bioinformatics

    E-Print Network [OSTI]

    Utrecht, Universiteit

    their master. Our two MSc courses "Computational Biology" and "Bioinformatics and Evolutionary GenomicsMaster track Theoretical Biology & Bioinformatics Modeling and bioinformatics is an important Biology & Bioinformatics provides courses introducing you to the basic concepts of modeling

  14. JOURNAL OF LIGHTWAVE TECHNOLOGY, VOL. 18, NO. 12, DECEMBER 2000 2167 10 Gb/s Multiple Wavelength, Coherent Short Pulse

    E-Print Network [OSTI]

    Jalali. Bahram

    /s by year 2002 with a further doubling every two years. Utilizing the entire 40 THz low loss transmission links. The preferred approach to utilize the low loss transmis- sion window of silica fibers calculate the coherence degradation due to amplification of incoherent energy during the SC generation

  15. Viewing biology in action | EMSL

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    biology in action Released: June 11, 2014 DOE-funded pilot program will create mesoscale biological imaging platform James Evans EMSL received first-year funding of almost...

  16. Todd Newberry: Professor of Biology

    E-Print Network [OSTI]

    Newberry, Andrew Todd; Jarrell, Randall; Regional History Project, UCSC Library

    2006-01-01T23:59:59.000Z

    Professor of Biology: Early Retirement page 44 Jarrell: ToProfessor of Biology: Early Retirement page 45 Jarrell: ToWar 33 Voluntary Early Retirement Incentive Program (VERIP)

  17. Biological Interactions and Dynamics

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    proactive "EMSL 2.0-style" research paradigm. Because of the rapid pace of modern genomics and systems biology research, it is necessary to respond rapidly and flexibly to...

  18. Work with Biological Materials

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Work with Biological Materials Print Planning A complete Experiment Safety Sheet (ESS) is required before work can be done at the ALS. This ESS is either a part of the proposal...

  19. 7th Annual Systems Biology Symposium: Systems Biology and Engineering

    SciTech Connect (OSTI)

    Galitski, Timothy P.

    2008-04-01T23:59:59.000Z

    Systems biology recognizes the complex multi-scale organization of biological systems, from molecules to ecosystems. The International Symposium on Systems Biology has been hosted by the Institute for Systems Biology in Seattle, Washington, since 2002. The annual two-day event gathers the most influential researchers transforming biology into an integrative discipline investingating complex systems. Engineering and application of new technology is a central element of systems biology. Genome-scale, or very small-scale, biological questions drive the enigneering of new technologies, which enable new modes of experimentation and computational analysis, leading to new biological insights and questions. Concepts and analytical methods in engineering are now finding direct applications in biology. Therefore, the 2008 Symposium, funded in partnership with the Department of Energy, featured global leaders in "Systems Biology and Engineering."

  20. Fishery Biology Graduate Programs

    E-Print Network [OSTI]

    Fishery Biology Graduate Programs University of Alaska Fairbanks, Alaska 997750820 Program/degrees/index.html University of Arizona Tucson, Arizona 95721 Program: Fisheries Conservation and Management http://ag.arizona.edu/srnr/academicprograms/wildlifefisheries/gradstudiesFisheries.html Auburn University Auburn, Alabama 368490001 Programs: Aquaculture, Aquatic Ecology, Fishery Management

  1. BIOLOGICAL ANALYSIS Mass Spectrometry

    E-Print Network [OSTI]

    Greenaway, Alan

    Microscope) Analytical Equipment · High Performance Liquid Chromatography · Fast Protein Liquid Chromatography · Gas Chromatography · GC/MS · Elemental Analyser Molecular Biology Equipment · Biorad PCR Machine reactor for scale up studies In-line Particle sizers Rheometers Separation tanks Oscillating column (4m

  2. Chemistry and Chemical Biology

    E-Print Network [OSTI]

    Linhardt, Robert J.

    and interdisciplinary areas, including biochemical solar energy research, artificial photosynthesis and bio Biology at Rensselaer invites applications from students interested in pursuing a Ph.D. degree in an interdisciplinary environment with research opportunities in emerging fields, such as energy and the environment

  3. Biological and Environmental

    E-Print Network [OSTI]

    and sustainable biofuel but will also advance our understanding in areas of fundamental biological science. After capitalize on recent technological and scientific advances. Several multidisciplinary projects of key,ecosystemmonitoringandrestoration,combiningcropresearchandmicrobial engineering to make biofuels a viable alternative to fossil fuels, and personalized medicine to improve health

  4. Biological and Environmental Research

    E-Print Network [OSTI]

    recalcitrance. Using an integrated approach to solving the challenge of producing biofuel from cellulosic materials, the center will not only provide the scientific basis for affordable and sustainable biofuel but will also advance our understanding in areas of fundamental biological science. BESC researchers have

  5. CANCER BIOLOGY Infectioustumourcells

    E-Print Network [OSTI]

    Nowak, Martin A.

    CANCER BIOLOGY Infectioustumourcells David Dingli and Martin A. Nowak Cancer cells are generally infectious agents and be transmitted between individuals. The current view of cancer development is that normal cells are transformed into tumour cells by sequential mutations that activate cancer- promoting

  6. ECOLOGY LABORATORY BIOLOGY 341

    E-Print Network [OSTI]

    Vonessen, Nikolaus

    Page 1 ECOLOGY LABORATORY BIOLOGY 341 Fall Semester 2008 Bighorn Sheep Rams at Bison Range National ecological data; and 3) oral and written communication skills. Thus, these ecology labs, and statistical analyses appropriate for ecological data. A major goal of this class will be for you to gain

  7. Roadmap: Environmental and Conservation Biology Conservation Biology Bachelor of Science

    E-Print Network [OSTI]

    Sheridan, Scott

    Roadmap: Environmental and Conservation Biology ­Conservation Biology Bachelor of Science [AS Geology Elective 3-4 See note 2 on page 2 General Elective 4 #12;Roadmap: Environmental and Conservation Summary on page 2 Conservation Biology Concentration Elective 2 See note 3 on page 2 Semester Five: [15

  8. Guest Editors' Introduction: Synthetic Biology

    E-Print Network [OSTI]

    Densmore, Douglas

    + undergraduate participants from around the world. Synthetic Biology had a global market which gene- rated $233 Tufts University h SYNTHETIC BIOLOGY IS trending, as evidenced by the recent achievements in biofuels

  9. Experiment design for systems biology

    E-Print Network [OSTI]

    Apgar, Joshua Farley

    2009-01-01T23:59:59.000Z

    Mechanism-based chemical kinetic models are increasingly being used to describe biological signaling. Such models serve to encapsulate current understanding of pathways and to enable insight into complex biological processes. ...

  10. Modular architecture in biological networks

    E-Print Network [OSTI]

    Ramachandran, Gopal (Gopal Sebastian)

    2007-01-01T23:59:59.000Z

    In the past decade, biology has been revolutionized by an explosion in the availability of data. Translating this new wealth of information into meaningful biological insights and clinical breakthroughs will require a ...

  11. Biological Engineering integrates life sciences

    E-Print Network [OSTI]

    Walter, M.Todd

    mitigating 40 million pounds of carbon dioxide greenhouse gases each year, and would pay for itself in les with the constantly evolving science of biology, the field of Biological Engineering tackles local, national

  12. Biological Interactions and Dynamics Workshop | EMSL

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Biological Interactions and Dynamics Workshop Biological Interactions and Dynamics Workshop Wiley HS, Kaplan S. 2011. "Biological Interactions and Dynamics Science Theme Advisory...

  13. 2013 Biological Hydrogen Production Workshop Summary Report ...

    Office of Energy Efficiency and Renewable Energy (EERE) Indexed Site

    Biological Hydrogen Production Workshop Summary Report 2013 Biological Hydrogen Production Workshop Summary Report November 2013 summary report for the 2013 Biological Hydrogen...

  14. Environmental Biology | Clean Energy | ORNL

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    microbiology, biogeochemistry, molecular biology, molecular dynamics, bioinformatics, genomics, neutron science, chemistry, and computing-and spans multiple scales, from the...

  15. Systems Biology | Clean Energy | ORNL

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    of interdisciplinary scientists. Additional systems biology resources Research Highlights Media Mentions Publications Newsletters Biosciences Division Recent news releases 11...

  16. Perspectives Computational Biology in Brazil

    E-Print Network [OSTI]

    Neshich, Goran

    Perspectives Computational Biology in Brazil Goran Neshich Introduction At the request of the PLoS Computational Biology Editor-in- Chief, I agreed to write about computational biology in Brazil (see author of the field itself is short); b) the current state of the field in Brazil; c) the influence of computational

  17. COMPUTATIONAL MOLECULAR BIOLOGY TRAINING PROGRAM

    E-Print Network [OSTI]

    Mayfield, John

    in the burgeoning fields of bioinformatics and computational biology. A major outcome of the initial funding period was the establishment of ISU's interdepartmental graduate program in Bioinformatics and Computational Biology (BCB for Research Excellence in Bioinformatics and Computational Biology (BCB). The ISU-NMSU partnership

  18. Biological particle identification apparatus

    DOE Patents [OSTI]

    Salzman, Gary C. (Los Alamos, NM); Gregg, Charles T. (Los Alamos, NM); Grace, W. Kevin (Los Alamos, NM); Hiebert, Richard D. (Los Alamos, NM)

    1989-01-01T23:59:59.000Z

    An apparatus and method for making multiparameter light scattering measurements from suspensions of biological particles is described. Fourteen of the sixteen Mueller matrix elements describing the particles under investigation can be substantially individually determined as a function of scattering angle and probing radiations wavelength, eight elements simultaneously for each of two apparatus configurations using an apparatus which incluees, in its simplest form, two polarization modulators each operating at a chosen frequency, one polarizer, a source of monochromatic electromagnetic radiation, a detector sensitive to the wavelength of radiation employed, eight phase-sensitive detectors, and appropriate electronics. A database of known biological particle suspensions can be assembled, and unknown samples can be quickly identified once measurements are performed on it according to the teachings of the subject invention, and a comparison is made with the database.

  19. 7.013 Introductory Biology, Spring 2005

    E-Print Network [OSTI]

    Sive, Hazel L.

    The MIT Biology Department core courses, 7.012, 7.013, and 7.014, all cover the same core material, which includes the fundamental principles of biochemistry, genetics, molecular biology, and cell biology. Biological ...

  20. Autofermentative Biological Hydrogen Production by Cyanobacteria...

    Office of Energy Efficiency and Renewable Energy (EERE) Indexed Site

    Autofermentative Biological Hydrogen Production by Cyanobacteria Autofermentative Biological Hydrogen Production by Cyanobacteria Presentation by Charles Dismukes, Rutgers...

  1. Biological and Environmental Research

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative1 First Use of Energy for All Purposes (Fuel and Nonfuel), 2002; Level: National5Sales for4,645 3,625govInstrumentstdmadapInactiveVisiting the TWP TWPAlumniComplexMaterialProductionBiological and

  2. Biology | More Science | ORNL

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative1 First Use of Energy for All Purposes (Fuel and Nonfuel), 2002; Level: National5Sales for4,645 3,625govInstrumentstdmadapInactiveVisiting the TWP TWPAlumniComplexMaterialProductionBiologicalLaboratories

  3. Department of Systems Biology & Bioinformatics

    E-Print Network [OSTI]

    Rostock, Universität

    Department of Systems Biology & Bioinformatics Faculty of Computer Sciences & Electrical, comparability and fairness. Practical Aspects and Soft Skills Technical Achievement Background understanding

  4. Biological & Environmental Research Abstracts Database

    Office of Scientific and Technical Information (OSTI)

    Welcome to the Administrative section of the Biological and Environmental Research Abstracts Database. Please logon. Logon Name: Password: Logon CommentsEmail Us * Security...

  5. CollegeofScience Biological Sciences

    E-Print Network [OSTI]

    Hickman, Mark

    ,populations,and even ecosystems. Our courses will help prepare you for a career in biology,be it in biodiversity

  6. COMPLEX BIOLOGICAL MECHANISMS: CYCLIC, OSCILLATORY,

    E-Print Network [OSTI]

    Bechtel, William

    COMPLEX BIOLOGICAL MECHANISMS: CYCLIC, OSCILLATORY, AND AUTONOMOUS William Bechtel and Adele- nomological framework and its focus on laws as the primary explanatory vehicle; for them, a scientific

  7. Plant Vascular Biology 2010

    SciTech Connect (OSTI)

    Ding, Biao

    2014-11-17T23:59:59.000Z

    This grant supported the Second International Conference on Plant Vascular Biology (PVB 2010) held July 24-28, 2010 on the campus of Ohio State University, Columbus, Ohio. Biao Ding (Ohio State University; OSU) and David Hannapel (Iowa State University; ISU) served as co-chairs of this conference. Biao Ding served as the local organizer. PVB is defined broadly here to include studies on the biogenesis, structure and function of transport systems in plants, under conditions of normal plant growth and development as well as of plant interactions with pathogens. The transport systems cover broadly the xylem, phloem, plasmodesmata and vascular cell membranes. The PVB concept has emerged in recent years to emphasize the integrative nature of the transport systems and approaches to investigate them.

  8. Staunton State Park Biological Inventory

    E-Print Network [OSTI]

    Staunton State Park Biological Inventory Prepared by: Susan Spackman, David Anderson, Jeremy Biological Inventory Prepared by: Susan Spackman, David Anderson, Jeremy Siemers, Phyllis Pineda, and Jill. The information management staff with CNHP was responsible for integrating the data resulting from the inventory

  9. FISHERY RESEARCH BIOLOGICAL LABORATORY, GALVESTON

    E-Print Network [OSTI]

    stations conduct fish ry re - search in the Gulf of Mexico as part of the work of the Bureau's Gulf, St. Pet rsburg Beach, Fla. Biological Res earch Biological Laboratory, Beaufort, N. C hw Gulf of Mexico Abundance of postlarval and juv nil shrimp Pink shrimp life history . Brown

  10. Purdue extension Agricultural&Biological

    E-Print Network [OSTI]

    for an extended period and encourage biological treatment to minimize organic matter (BOD), nitrogenPurdue extension Don Jones Agricultural&Biological Engineering Alan Sutton AnimalSciences Purdue structures must be designed and managed to contain manure, wastewater, contaminated runoff, and ma- nure

  11. Comparative Microbial Genomics group CenterforBiologicalSequenceanalysisDepartmentofSystemsBiology

    E-Print Network [OSTI]

    Ussery, David W.

    Comparative Microbial Genomics group CenterforBiologicalSequenceanalysisDepartmentofSystemsBiology Visualisation of Large Amounts of Data Dave Ussery 27 February, 2008 #12;Comparative Microbial Genomics group CenterforBiologicalSequenceanalysisDepartmentofSystemsBiology #12;Comparative Microbial Genomics group

  12. Loop Quantum Theory Applied to Biology and Nonlinear Whole Biology

    E-Print Network [OSTI]

    Yi-Fang Chang

    2008-01-02T23:59:59.000Z

    The loop quantum theory, which constitutes a very small discontinuous space, as new method is applied to biology. The model of protein folding and lungs is proposed. In the model, some known results are used, and four approximate conclusions are obtained: their structures are quantized, their space regions are finite, various singularities correspond to folding and crossed points, and different types of catastrophe exist. Further, based on the inseparability and correlativity of the biological systems, the nonlinear whole biology is proposed, and four basic hypotheses are formed. It may unify reductionism and holism, structuralism and functionalism. Finally, the medical meaning of the theory is discussed briefly.

  13. Mesangial cell biology

    SciTech Connect (OSTI)

    Abboud, Hanna E., E-mail: Abboud@uthscsa.edu

    2012-05-15T23:59:59.000Z

    Mesangial cells originate from the metanephric mesenchyme and maintain structural integrity of the glomerular microvascular bed and mesangial matrix homeostasis. In response to metabolic, immunologic or hemodynamic injury, these cells undergo apoptosis or acquire an activated phenotype and undergo hypertrophy, proliferation with excessive production of matrix proteins, growth factors, chemokines and cytokines. These soluble factors exert autocrine and paracrine effects on the cells or on other glomerular cells, respectively. MCs are primary targets of immune-mediated glomerular diseases such as IGA nephropathy or metabolic diseases such as diabetes. MCs may also respond to injury that primarily involves podocytes and endothelial cells or to structural and genetic abnormalities of the glomerular basement membrane. Signal transduction and oxidant stress pathways are activated in MCs and likely represent integrated input from multiple mediators. Such responses are convenient targets for therapeutic intervention. Studies in cultured MCs should be supplemented with in vivo studies as well as examination of freshly isolated cells from normal and diseases glomeruli. In addition to ex vivo morphologic studies in kidney cortex, cells should be studied in their natural environment, isolated glomeruli or even tissue slices. Identification of a specific marker of MCs should help genetic manipulation as well as selective therapeutic targeting of these cells. Identification of biological responses of MCs that are not mediated by the renin–angiotensin system should help development of novel and effective therapeutic strategies to treat diseases characterized by MC pathology.

  14. Bacterial Community Structure in Geographically Distributed Biological

    E-Print Network [OSTI]

    Alvarez-Cohen, Lisa

    Bacterial Community Structure in Geographically Distributed Biological Wastewater Treatment of the microbial communities within biological wastewater treatment reactors is incomplete due to limitations microbial community composition in five biological wastewater treatment reactors in China and the United

  15. Introduction to Bioinformatics A Systems Biology Approach

    E-Print Network [OSTI]

    Rocha, Luis

    Introduction to Bioinformatics A Systems Biology Approach Luis M. Rocha Complex Systems Modeling Computational Biology to Bioinformatics Course Layout: March 11-15, 2002 #12;P Systems Biology P Synthetic, Multi- Disciplinary Approach

  16. DEPARTMENT OF BIOLOGY Hurricane Savitz Hits Florida

    E-Print Network [OSTI]

    Kelly, John J.

    DEPARTMENT OF BIOLOGY Hurricane Savitz Hits Florida (Photo Credit: Michael Masellis, Biology Major Hurricane Savitz Hits Florida Future Science Teachers' Club Recent Grant Successes Forthcoming Publications

  17. The sequestration efficiency of the biological pump

    E-Print Network [OSTI]

    DeVries, Tim; Primeau, Francois; Deutsch, Curtis

    2012-01-01T23:59:59.000Z

    Preformed phosphate, soft tissue pump and atmospheric CO 2 ,efficiency of the biological pump Tim DeVries, 1 Francoisproduces a “biological pump” that reduces the concentration

  18. Computational biology and high performance computing

    E-Print Network [OSTI]

    Shoichet, Brian

    2011-01-01T23:59:59.000Z

    Biology and High Performance Computing Manfred Zorn, TeresaBiology and High Performance Computing Presenters: Manfred99-Portland High performance computing has become one of the

  19. Synthetic biology and crop engineering

    Broader source: Energy.gov [DOE]

    Breakout Session 2: Frontiers and Horizons Session 2-A: Synthetic Biology and the Promise of Biofuels Jonathan Burbaum, Program Director, Department of Energy, Office of Science, ARPA–E

  20. AGRI-SCIENCE CHEMICAL BIOLOGY

    E-Print Network [OSTI]

    photosynthetic efficiency Improve chemical agronomic and agro-ecological control measures Modelling through translation of chemical biology tools and technologies Control weeds, disease and pests Minimise a platform to steer future research and policy directions. · Encourage external outreach to engage

  1. Preparing for Transfer Biological Engineering

    E-Print Network [OSTI]

    Walter, M.Todd

    Environmental Engineering Game Design Industrial Systems & Information Technology Information Science MaterialsPreparing for Transfer Majors: Biological Engineering Chemical Engineering Civil Engineering Computer Science Electrical & Computer Engineering Engineering Physics Environmental Engineering

  2. BIOLOGICAL SAFETY POLICY PROGRAM TOPICS

    E-Print Network [OSTI]

    Fang-Yen, Christopher

    research protocols involving hazardous materials, reviews construction design for safety features with or near biologically hazardous materials (infectious agents, biohazards or recombinant DNA). 1.3 "Infectious waste" or "biohazardous waste" is defined by the Pennsylvania Department of Environmental

  3. Chemistry Division Department of Biological

    E-Print Network [OSTI]

    Heller, Barbara

    1 Chemistry Division Department of Biological and Chemical Sciences, Illinois Institute-13 Chemistry Division invites nominations for Kilpatrick Fellowship for the academic year 2012's Chemistry Department from 1947­1960. Mary Kilpatrick was a chemistry faculty member from 1947

  4. Modular design of biological systems

    E-Print Network [OSTI]

    Norville, Julie Erin, 1980-

    2012-01-01T23:59:59.000Z

    The focus of my research is the development of technology for building compound biological systems from simpler pieces. I designed BioScaffold parts, a family of variable regions that can be inserted into a DNA sequence ...

  5. Biological Science | Department of Energy

    Office of Energy Efficiency and Renewable Energy (EERE) Indexed Site

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative Fuels Data Center Home Page on Google Bookmark EERE: Alternative Fuels Data Center Home Page on Delicious Rank EERE: Alternative Fuels Data Center HomeIdleBiological Science Biological Science The protozoan

  6. Integrative Biology Keith A. Crandall, Chair

    E-Print Network [OSTI]

    Hart, Gus

    . The bioinformatics major is for students with interests in both the computer and the biological sciences. The degree merges these interests in the areas of bioinformatics and computational biology, giving students Programs and Degrees BS Bioinformatics BS Biology Composite Teaching BS Integrative Biology Students should

  7. Systems biology approach to bioremediation

    SciTech Connect (OSTI)

    Chakraborty, R.; Wu, C. H.; Hazen, T. C.

    2012-01-01T23:59:59.000Z

    Bioremediation has historically been approached as a ?black box? in terms of our fundamental understanding. Thus it succeeds and fails, seldom without a complete understanding of why. Systems biology is an integrated research approach to study complex biological systems, by investigating interactions and networks at the molecular, cellular, community, and ecosystem level. The knowledge of these interactions within individual components is fundamental to understanding the dynamics of the ecosystem under investigation. Understanding and modeling functional microbial community structure and stress responses in environments at all levels have tremendous implications for our fundamental understanding of hydrobiogeochemical processes and the potential for making bioremediation breakthroughs and illuminating the ?black box?.

  8. Chemical and Biological Engineering Department Code 1 Department of Chemical & Biological Engineering

    E-Print Network [OSTI]

    Chemical and Biological Engineering Department Code 1 CODE of the Department of Chemical of Chemical & Biological Engineering. For clarity of presentation, some passages are copied directly from shall offer an undergraduate chemical and biological engineering program of technological, scientific

  9. A bioinformatics/computational biology postdoctoral research position available to analyze biological networks in plants

    E-Print Network [OSTI]

    Lu, Jiaheng

    A bioinformatics/computational biology postdoctoral research position available to analyze biological networks in plants A bioinformatics postdoctoral position is available immediately in the laboratory of Dr. Sue Rhee at the Carnegie Institution, Department of Plant Biology (Stanford, CA

  10. Theoretical Physics in Cellular Biology

    E-Print Network [OSTI]

    Theoretical Physics in Cellular Biology: Some Illustrative Case Studies Living matter obeys the laws of physics, and the principles and methods of theoretical physics ought to find useful application observation, I will describe a few specific instances where approaches inspired by theoretical physics allow

  11. DEGREE REQUIREMENTS BIOLOGICAL ENGINEERING TECHNOLOGY

    E-Print Network [OSTI]

    Walter, M.Todd

    DEGREE REQUIREMENTS BIOLOGICAL ENGINEERING TECHNOLOGY ENVIRONMENTAL ENGINEERING TECHNOLOGY The curriculum in the technology programs must satisfy the College of Agriculture and Life Sciences (CALS for the technology programs are listed by subject matter in three major categories: (A) Basic Subjects, (B) Advanced

  12. WithCarbonSequestration Biological-

    E-Print Network [OSTI]

    · Techno-Economic Analysis of H2 Production by Gasification of Biomass · Renewables Analysis · BiomassWithCarbonSequestration Biomass Hydro Wind Solar Coal Nuclear Natural Gas Oil Biological- and Biomass- Based Hydrogen Production RoxanneRoxanne DanzDanz #12;Barriers Hydrogen Production from Biomass

  13. Biological Impacts of Climate Change

    E-Print Network [OSTI]

    McCarty, John P.

    Biological Impacts of Climate Change John P McCarty, University of Nebraska at Omaha, Omaha, NE and reproduction depend on how well adapted individuals are to local climate patterns. Climate change can disrupt subsequent impacts on populations or species' distributions across geographic regions. Climate change may

  14. Theory in Biology available light

    E-Print Network [OSTI]

    Nowak, Martin A.

    Magazine R406 Theory in Biology Theory is available light Martin A. Nowak Many people praise Gregor the neutral theory of evolution, which assumes that the overwhelming majority of molecular mutations do assume the neutral theory is correct. In a brilliant PhD thesis submitted in 1964, Bill Hamilton

  15. Department of Biology -Committees and Representatives

    E-Print Network [OSTI]

    Simons Biology Safety Committee Dave Omond Ed Bruggink Jim Cheetham (Chair) Mike Weber Biology Space Committee Jim Cheetham (Chair) Mike Weber Tom Sherratt Ed Bruggink Curriculum Committee (elected) Tom

  16. MS.BIOLOGY.THESIS ACADEMIC LEARNING PLAN

    E-Print Network [OSTI]

    O'Laughlin, Jay

    effectively to constructive feedback. Job Prospects for Biology Graduates MS in Biology Bioremediation Biotechnology Medical Research Industry Government Education Microbiology Health Professions Research Health Food Production Pollution Control Environmental Diagnostics Forestry Agriculture #12;APPENDIX B

  17. Stochastic processes in biological systems : selected problems

    E-Print Network [OSTI]

    Artomov, Maksym

    2010-01-01T23:59:59.000Z

    Majority of biological processes can not be described deterministically. Multple levels of regulation contribute to the noise in the observable properties of the cells: fluctuations are ubiquitous in biological networks ...

  18. Foundational platform for mammalian synthetic biology

    E-Print Network [OSTI]

    Davidsohn, Noah (Noah Justin)

    2013-01-01T23:59:59.000Z

    The emergent field of synthetic biology is different from many other biological engineering efforts, in that its roots, design principles, and forward engineering perspective have been adopted from electrical engineering ...

  19. Abiotic and Biological Transformation of Tetraalkoxysilanes

    E-Print Network [OSTI]

    Semprini, Lewis

    . An aerobic microbial culture from the local wastewater treatment plant that could grow and mineralizeAbiotic and Biological Transformation of Tetraalkoxysilanes and Trichloroethene/ cis-1 compounds (tetra- alkoxysilanes) by abiotic hydrolysis and biological mineralization was investigated

  20. Noah A. Rosenberg Department of Biology

    E-Print Network [OSTI]

    Rosenberg, Noah

    , Life Sciences Institute and Center for Computational Medicine & Bioinformatics, University of Michigan Education 2001-2005 University of Southern California, Postdoc, Molecular and Computational Biology 1998, BMC Bioinformatics 2010- Editorial Board Member, Human Biology 2010- Associate Editor, Genetics 2009

  1. Autonomous observations of the ocean biological carbon pump

    E-Print Network [OSTI]

    Bishop, James K.B.

    2009-01-01T23:59:59.000Z

    efficiency of biological pump in the global ocean. JournalOcean Biological Carbon Pump Carbon Flux Explorerocean’s “biological carbon pump” (Broecker and Peng, 1982;

  2. advanced molecular biology: Topics by E-print Network

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    311 Biology and Medicine Websites Summary: Molecular Biology Biology 311 Fall 2013 Syllabus Instructor: Dr. Deborah Lycan Class: MWF 9@lclark.edu Website: http:...

  3. PG&E Reconductoring Project Biological Assessment (Revised) ...

    Broader source: Energy.gov (indexed) [DOE]

    PG&E Reconductoring Project Biological Assessment (Revised) PG&E Reconductoring Project Biological Assessment (Revised) PG&E Reconductoring Project Biological Assessment (1216...

  4. EMSL Biological Interactions and Dynamics Science Theme Advisory...

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Biological Interactions and Dynamics Science Theme Advisory Panel Workshop EMSL Biological Interactions and Dynamics Science Theme Advisory Panel Workshop "Biological Interactions...

  5. Biological Inventory Colorado Canyons National Conservation Area

    E-Print Network [OSTI]

    Biological Inventory of the Colorado Canyons National Conservation Area Prepared by: Joe Stevens .............................. 12 Identify Targeted Inventory Areas

  6. A Biological Inventory and Conservation Recommendations

    E-Print Network [OSTI]

    A Biological Inventory and Conservation Recommendations for the Great Sand Dunes and San Luis Lakes General Services Building Ft. Collins, Colorado 80523 March 1999 i #12;A Biological Inventory PROGRAM SAGUACHE, COLORADO P.O. Box 674, Saguache, Colorado 81149 ii #12;Biological Inventory of the Great

  7. Graduate Programs in Plant Biology and

    E-Print Network [OSTI]

    Wildermuth, Mary C

    not re- biochemistry, cell and molecular biology (B22). pmb.berkeley.edu Plant&Microbial Biology #12;The to the environment will continue to fuel the expansion of plant research well into the future. The plant biology program focuses on contemporary ba- sic plant research, design of biotechnologies, and plant-microbe

  8. School of Environmental and Biological Sciences

    E-Print Network [OSTI]

    Goodman, Robert M.

    School of Environmental and Biological Sciences #12;Who We are and What We do Students at the Rutgers School of Environmental and Biological Sciences are part of a rich history of learning, innovation) Biological Sciences Biotechnology Animal Biotechnology Bioinformatics Bioscience Policy and Management

  9. Applications to Computational Molecular Biology Giuseppe Lancia

    E-Print Network [OSTI]

    Lancia, Giuseppe

    of the first type Bioinformatics problems, and reserve the term Computational Biology for the study of problemsApplications to Computational Molecular Biology Giuseppe Lancia 1 Introduction Computational decade. The seeds for the birth of Computational Biology were sowed in the end of the Seventies, when

  10. Undergraduate Minor in Computational biology & bioinformatics

    E-Print Network [OSTI]

    Logan, David

    Undergraduate Minor in Computational biology & bioinformatics Course Title Hours CSCE 155T Intro@unl.edu The Computational Biology and Bioinformatics (CBB) Minor is an interdisciplinary program that prepares students and for related graduate studies. The Computational Biology & Bioinformatics (CBB) Minor requires 13 credit hours

  11. Bioinformatics and Computational Biology Services Introduction

    E-Print Network [OSTI]

    Steiner, Ullrich

    Bioinformatics and Computational Biology Services Introduction Jenny Barna, Department of the Biological Sciences bioinformatics and computational biology research support service, which is used it provides. There are servers with many cores and very large memory (RAM) on which you can run computing jobs

  12. Roadmap: Biology Organismal Biology Bachelor of Science [AS-BS-BSCI-ORBI

    E-Print Network [OSTI]

    Sheridan, Scott

    Roadmap: Biology ­ Organismal Biology ­ Bachelor of Science [AS-BS-BSCI-ORBI] College of Arts/LNHD This roadmap is a recommended semester-by-semester plan of study for this major. However, courses General Elective 3 #12;Roadmap: Biology ­ Organismal Biology ­ Bachelor of Science [AS

  13. SPECIAL ISSUE ON SYSTEMS BIOLOGY, JANUARY 2008 51 Stochastic Modeling and Control of Biological

    E-Print Network [OSTI]

    Pappas, George J.

    of modeling, abstraction, and control of a biological system, namely, the lactose regulation systemSPECIAL ISSUE ON SYSTEMS BIOLOGY, JANUARY 2008 51 Stochastic Modeling and Control of Biological for stochastic modeling, model abstraction, and controller design for a biological system. The first half

  14. ECOLOGY, EVOLUTION AND ENVIRONMENTAL BIOLOGY (for students entering Biology in Fall 2011 or later)

    E-Print Network [OSTI]

    Jiang, Wen

    ECOLOGY, EVOLUTION AND ENVIRONMENTAL BIOLOGY (for students entering Biology in Fall 2011 or later course other than BIOL 54200 124 Total Credits BIOLOGY: 1. BIOL 12100 Biology I: Diversity, Ecology 28600 Intro. to Ecology and Evolution (2 cr.; spring) or BIOL 29500, Intro. to Evolution & Ecology (2 cr

  15. BIOINFORMATICS AND COMPUTATIONAL BIOLOGY 2014 Molecular Biology Building, Iowa State University, Ames, Iowa 50011-3260

    E-Print Network [OSTI]

    Mayfield, John

    BIOINFORMATICS AND COMPUTATIONAL BIOLOGY 2014 Molecular Biology Building, Iowa State University of recommendation in my file at the Bioinformatics and Computational Biology program, Iowa State University. [ ] I in the Bioinformatics and Computational Biology program at Iowa State University. We would appreciate your evaluation

  16. AGRICULTURAL AND BIOLOGICAL ENGINEERING PURSUE A GRADUATE DEGREE IN

    E-Print Network [OSTI]

    Gilbert, Matthew

    AGRICULTURAL AND BIOLOGICAL ENGINEERING PURSUE A GRADUATE DEGREE IN AGRICULTURAL AND BIOLOGICAL ENGINEERING Department of Agricultural and Biological Engineering 338 Agricultural Engineering Sciences of Agricultural and Biological Engineering offers a limited number of graduate fellowships and assistantships

  17. Ecology and Evolutionary Biology The Wiess School of Natural Sciences

    E-Print Network [OSTI]

    Richards-Kortum, Rebecca

    Ecology and Evolutionary Biology The Wiess School of Natural Sciences Chair Evan Siemann Professors of Ecology and Evolutionary Biologyoffersabroadrangeofcoursesinthebiosciences:animalbehavior,animal biology, bioinformatics, conservation biology, diseases, ecology, evolutionary biology, field ecology, genetics, genomics

  18. Iosif Vaisman Department of Bioinformatics and Computational Biology

    E-Print Network [OSTI]

    Vaisman, Iosif

    Iosif Vaisman Department of Bioinformatics and Computational Biology Email: ivaisman@gmu.edu BINF agreed on the following definitions of bioinformatics and computational biology recognizing STRUCTURAL BIOLOGY COMPUTATIONAL MOLECULAR BIOLOGY BIOINFORMATICS GENOMICS STRUCTURAL GENOMICS PROTEOMICS

  19. Method of measurement in biological systems

    DOE Patents [OSTI]

    Turteltaub, K.W.; Vogel, J.S.; Felton, J.S.; Gledhill, B.L.: Davis, J.C.; Stanker, L.H.

    1993-05-11T23:59:59.000Z

    A method is disclosed of quantifying molecules in biological substances, comprising: selecting a biological host in which radioisotopes are present in concentrations equal to or less than those in the ambient biosphere; preparing a long-lived radioisotope labeled reactive chemical specie; administering the chemical specie to the biological host in doses sufficiently low to avoid significant overt damage to the biological system; allowing a period of time to elapse sufficient for dissemination and interaction of the chemical specie with the host throughout the biological system of the host; isolating a reacted fraction of the biological substance from the host in a manner sufficient to avoid contamination of the substance from extraneous sources; converting the fraction of biological substance by suitable means to a material which efficiently produces charged ions in at least one of several possible ion sources without introduction of significant isotopic fractionation; and measuring the radioisotope concentration in the material by means of direct isotopic counting.

  20. First Passage Problems in Biology

    E-Print Network [OSTI]

    Tom Chou; Maria R. D'Orsogna

    2014-08-20T23:59:59.000Z

    Applications of first passage times in stochastic processes arise across a wide range of length and time scales in biological settings. After an initial technical overview, we survey representative applications and their corresponding models. Within models that are effectively Markovian, we discuss canonical examples of first passage problems spanning applications to molecular dissociation and self-assembly, molecular search, transcription and translation, neuronal spiking, cellular mutation and disease, and organismic evolution and population dynamics. In this last application, a simple model for stem-cell ageing is presented and some results derived. Various approximation methods and the physical and mathematical subtleties that arise in the chosen applications are also discussed.

  1. Systems biology of Microbial Communities

    SciTech Connect (OSTI)

    Navid, A; Ghim, C; Fenley, A; Yoon, S; Lee, S; Almaas, E

    2008-04-11T23:59:59.000Z

    Microbes exist naturally in a wide range of environments, spanning the extremes of high acidity and high temperature to soil and the ocean, in communities where their interactions are significant. We present a practical discussion of three different approaches for modeling microbial communities: rate equations, individual-based modeling, and population dynamics. We illustrate the approaches with detailed examples. Each approach is best fit to different levels of system representation, and they have different needs for detailed biological input. Thus, this set of approaches is able to address the operation and function of microbial communities on a wide range of organizational levels.

  2. Biological Safety | Department of Energy

    Office of Energy Efficiency and Renewable Energy (EERE) Indexed Site

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative Fuels Data Center Home Page on Google Bookmark EERE: Alternative Fuels DataDepartment of Energy Your Density Isn't Your Destiny: The FutureCommentsEnergyandapproximately 10 wt%inand FuelBiological

  3. Computational Biology | More Science | ORNL

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative1 First Use of Energy for All Purposes (Fuel and Nonfuel), 2002; Level: National5Sales for4,645U.S. DOEThe Bonneville Power Administration would like submit theInnovationComputational Biology SHARE Computational

  4. Systems Biology | More Science | ORNL

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative1 First Use of Energy for All Purposes (Fuel and Nonfuel), 2002; Level:Energy: Grid Integration Redefining What'sis Taking Over Our InstagramStructureProposed Action(InsertAbout the GeothermalSystems Biology

  5. Green Biologics | Open Energy Information

    Open Energy Info (EERE)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative Fuels Data Center Home Page onYou are now leaving Energy.gov You are now leaving Energy.gov You are8COaBulkTransmissionSitingProcess.pdfGetec AG Contracting JumpGoveNebraska:Ethanol LLC GO EthanolBiologics Jump to:

  6. Biological Applications of Synchrotron Radiation:

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative1 First Use of Energy for All Purposes (Fuel and Nonfuel), 2002; Level: National5Sales for4,645 3,625govInstrumentstdmadapInactiveVisiting the TWP TWPAlumniComplexMaterialProduction PetraBiological

  7. Rapid classification of biological components

    DOE Patents [OSTI]

    Thompson, Vicki S. (Idaho Falls, ID); Barrett, Karen B. (Meridian, ID); Key, Diane E. (Idaho Falls, ID)

    2010-03-23T23:59:59.000Z

    A method is disclosed for analyzing a biological sample by antibody profiling for identifying forensic samples or for detecting the presence of an analyte. In an illustrative embodiment of the invention, the analyte is a drug, such as marijuana, cocaine (crystalline tropane alkaloid), methamphetamine, methyltestosterone, or mesterolone. The method involves attaching antigens to a surface of a solid support in a preselected pattern to form an array wherein the locations of the antigens are known; contacting the array with the biological sample such that a portion of antibodies in the sample reacts with and binds to antigens in the array, thereby forming immune complexes; washing away antibodies that do not form immune complexes; and detecting the immune complexes, thereby forming an antibody profile. Forensic samples are identified by comparing a sample from an unknown source with a sample from a known source. Further, an assay, such as a test for illegal drug use, can be coupled to a test for identity such that the results of the assay can be positively correlated to a subject's identity.

  8. Rapid classification of biological components

    DOE Patents [OSTI]

    Thompson, Vicki S.; Barrett, Karen B.; Key, Diane E.

    2006-01-24T23:59:59.000Z

    A method is disclosed for analyzing a biological sample by antibody profiling for identifying forensic samples or for detecting the presence of an analyte. In an illustrative embodiment of the invention, the analyte is a drug, such as marijuana, cocaine, methamphetamine, methyltestosterone, or mesterolone. The method involves attaching antigens to the surface of a solid support in a preselected pattern to form an array wherein the locations of the antigens are known; contacting the array with the biological sample such that a portion of antibodies in the sample reacts with and binds to antigens in the array, thereby forming immune complexes; washing away antibodies that do form immune complexes; and detecting the immune complexes, thereby forming an antibody profile. Forensic samples are identified by comparing a sample from an unknown source with a sample from a known source. Further, an assay, such as a test for illegal drug use, can be coupled to a test for identity such that the results of the assay can be positively correlated to the subject's identity.

  9. Rapid classification of biological components

    DOE Patents [OSTI]

    Thompson, Vicki S. (Idaho Falls, ID); Barrett, Karen B. (Meridian, ID); Key, Diane E. (Idaho Falls, ID)

    2010-03-23T23:59:59.000Z

    A method is disclosed for analyzing a biological sample by antibody profiling for identifying forensic samples or for detecting the presence of an analyte. In an illustrative embodiment of the invention, the analyte is a drug, such as marijuana, Cocaine (crystalline tropane alkaloid), methamphetamine, methyltestosterone, or mesterolone. The method involves attaching antigens of the surface of a solid support in a preselected pattern to form an array wherein the locations of the antigens are known; contacting the array with the biological sample such that a portion of antibodies in the sample reacts with and binds to antigens in the array, thereby forming immune complexes; washing away antibodies that do not form immune complexes; and detecting the immune complexes, thereby forming an antibody profile. Forensic samples are identified by comparing a sample from an unknown source with a sample from a known source. Further, an assay, such as a test for illegal drug use, can be coupled to a test for identity such that the results of the assay can be positively correlated to a subject's identity.

  10. Electrostatic thin film chemical and biological sensor

    DOE Patents [OSTI]

    Prelas, Mark A. (Columbia, MO); Ghosh, Tushar K. (Columbia, MO); Tompson, Jr., Robert V. (Columbia, MO); Viswanath, Dabir (Columbia, MO); Loyalka, Sudarshan K. (Columbia, MO)

    2010-01-19T23:59:59.000Z

    A chemical and biological agent sensor includes an electrostatic thin film supported by a substrate. The film includes an electrostatic charged surface to attract predetermined biological and chemical agents of interest. A charge collector associated with said electrostatic thin film collects charge associated with surface defects in the electrostatic film induced by the predetermined biological and chemical agents of interest. A preferred sensing system includes a charge based deep level transient spectroscopy system to read out charges from the film and match responses to data sets regarding the agents of interest. A method for sensing biological and chemical agents includes providing a thin sensing film having a predetermined electrostatic charge. The film is exposed to an environment suspected of containing the biological and chemical agents. Quantum surface effects on the film are measured. Biological and/or chemical agents can be detected, identified and quantified based on the measured quantum surface effects.

  11. Functional quantum biology in photosynthesis and magnetoreception

    E-Print Network [OSTI]

    Lambert, Neill; Cheng, Yuan-Chung; Li, Che-Ming; Chen, Guang-Yin; Nori, Franco

    2012-01-01T23:59:59.000Z

    Is there a functional role for quantum mechanics or coherent quantum effects in biological processes? While this question is as old as quantum theory, only recently have measurements on biological systems on ultra-fast time-scales shed light on a possible answer. In this review we give an overview of the two main candidates for biological systems which may harness such functional quantum effects: photosynthesis and magnetoreception. We discuss some of the latest evidence both for and against room temperature quantum coherence, and consider whether there is truly a functional role for coherence in these biological mechanisms. Finally, we give a brief overview of some more speculative examples of functional quantum biology including the sense of smell, long-range quantum tunneling in proteins, biological photoreceptors, and the flow of ions across a cell membrane.

  12. Functional quantum biology in photosynthesis and magnetoreception

    E-Print Network [OSTI]

    Neill Lambert; Yueh-Nan Chen; Yuan-Chung Cheng; Che-Ming Li; Guang-Yin Chen; Franco Nori

    2012-05-04T23:59:59.000Z

    Is there a functional role for quantum mechanics or coherent quantum effects in biological processes? While this question is as old as quantum theory, only recently have measurements on biological systems on ultra-fast time-scales shed light on a possible answer. In this review we give an overview of the two main candidates for biological systems which may harness such functional quantum effects: photosynthesis and magnetoreception. We discuss some of the latest evidence both for and against room temperature quantum coherence, and consider whether there is truly a functional role for coherence in these biological mechanisms. Finally, we give a brief overview of some more speculative examples of functional quantum biology including the sense of smell, long-range quantum tunneling in proteins, biological photoreceptors, and the flow of ions across a cell membrane.

  13. On Biology as an Emergent Science

    E-Print Network [OSTI]

    H. Pierre Noyes

    2007-05-31T23:59:59.000Z

    Biology is considered here as an "emergent science" in the sense of Anderson and of Laughlin and Pines. It is demonstrated that a straightforward mathematical definition of "biological system" is useful in showing how biology differs in structure from the lower levels in Anderson's "More is Different" hierarchy. Using cells in a chemostat as a paradigmatic exemplar of a biological system, it is found that a coherent collection of metabolic pathways through a single cell in the chemostat also satisfies the proposed definition of a biological system. This provides a theoretical and mathematical underpinning for Young's fundamental model of biological organization and integration. Evidence for the therapeutic efficacy of Young's method of analysis is provided by preliminary results of clinical trials of a specific application of Young's model to the treatment of cancer cachexia.

  14. Molecular biology of signal transduction in plants

    SciTech Connect (OSTI)

    Not Available

    1991-01-01T23:59:59.000Z

    This volume contains abstracts of oral presentations and poster sessions of the 1991 Cold Springs Harbor Meeting entitled Molecular Biology of Signal Transduction in Plants.

  15. Innovative Breakthrough Demonstrated for Biological Ethanol Production...

    Office of Environmental Management (EM)

    for Biological Ethanol Production June 30, 2015 - 11:43am Addthis Advanced Biofuels Process Demonstration Unit at Lawrence Berkeley National Laboratory. Photo credit:...

  16. Carbonic Acid Shows Promise in Geology, Biology

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    The Surprising Secrets of Carbonic Acid Probing the Surprising Secrets of Carbonic Acid Berkeley Lab Study Holds Implications for Geological and Biological Processes October 23,...

  17. Biological Survey of the Upper Purgatoire Watershed

    E-Print Network [OSTI]

    Biological Survey of the Upper Purgatoire Watershed Las Animas County, CO John Carney Colorado ...............................................................................................................9 Management Urgency Ranks ........................................................................................................10 POTENTIAL CONSERVATION SITE PLANNING BOUNDARIES........................................12 Off

  18. Plant Species Biology (2003) 18, 123127 2003 The Society for the Study of Species Biology

    E-Print Network [OSTI]

    Tomimatsu,, Hiroshi

    2003-01-01T23:59:59.000Z

    and Genetics, Graduate School of Environmental Earth Science, Hokkaido University, Sapporo 060-0810, JapanPlant Species Biology (2003) 18, 123­127 © 2003 The Society for the Study of Species Biology Blackwell Science, LtdOxford, UKPSBPlant Species Biology1442-1984The Society for the Study of Species

  19. Biological Hydrogen Production Using a Membrane Bioreactor

    E-Print Network [OSTI]

    Biological Hydrogen Production Using a Membrane Bioreactor Sang-Eun Oh,1 Prabha Iyer,1,2 Mary Ann bioreactor (MBR) for biological hydrogen production. The reactor was fed glucose (10,000 mg/L) and inoculated were used. B 2004 Wiley Periodicals, Inc. Keywords: membrane bioreactor; hydrogen production

  20. Southeastern Colorado Survey of Critical Biological Resources

    E-Print Network [OSTI]

    Southeastern Colorado Survey of Critical Biological Resources 2007 #12;ii #12;Southeastern Colorado Survey of Critical Biological Resources Prepared for: Colorado Cattleman's Agricultural Land Trust 8833 Department of Natural Resources Division of State Board of Land Commissioners 1313 Sherman Street Denver, CO

  1. Ninth International Workshop on Plant Membrane Biology

    SciTech Connect (OSTI)

    Not Available

    1993-12-31T23:59:59.000Z

    This report is a compilation of abstracts from papers which were discussed at a workshop on plant membrane biology. Topics include: plasma membrane ATP-ases; plant-environment interactions, membrane receptors; signal transduction; ion channel physiology; biophysics and molecular biology; vaculor H+ pumps; sugar carriers; membrane transport; and cellular structure and function.

  2. Book Review Geothermal Biology and Geochemis-

    E-Print Network [OSTI]

    Book Review Geothermal Biology and Geochemis- try in Yellowstone National Park. (eds WP Inskeep of life. The legacy of chemical and biologi- cal research in geothermal regimes, while short in duration geothermal areas, including Yellowstone, are largely confined to the specialty literature of geochemical

  3. STOCHASTIC GENERATION OF BIOLOGICALLY ACCURATE BRAIN NETWORKS

    E-Print Network [OSTI]

    STOCHASTIC GENERATION OF BIOLOGICALLY ACCURATE BRAIN NETWORKS A Thesis by ARAVIND ALURI Submitted OF BIOLOGICALLY ACCURATE BRAIN NETWORKS A Thesis by ARAVIND ALURI Submitted to the Office of Graduate Studies Head of Department, Valerie Taylor December 2005 Major Subject: Computer Science #12;iii ABSTRACT

  4. Bi23 BIOLOGY TUTORIALS WINTER TERM 2014

    E-Print Network [OSTI]

    Low, Steven H.

    Bi23 BIOLOGY TUTORIALS WINTER TERM 2014 SECTIONS 1 ­ 3 The Function and Regulation of Sleep (3. Huang, x3446, MC 156-29 #12;Bi23 BIOLOGY TUTORIALS WINTER TERM 2014 SECTIONS 4-6 Physical Principles crystallography and neutron scattering; nuclear magnetic resonance and magnetic resonance imaging; peptide and DNA

  5. Genome Biology 2005, 6:312 commentreviewsreportsdepositedresearchinteractionsinformationrefereedresearch

    E-Print Network [OSTI]

    Kellis, Manolis

    Genome Biology 2005, 6:312 commentreviewsreportsdepositedresearchinteractionsinformationrefereedresearch Meeting report Large-scale discovery and validation of functional elements in the human genome-mail: bbernst@fas.harvard.edu. Manolis Kellis. E-mail: manoli@mit.edu Published: 1 March 2005 Genome Biology

  6. Genome Biology 2006, 7:320 commentreviewsreportsdepositedresearchinteractionsinformationrefereedresearch

    E-Print Network [OSTI]

    Pritham, Ellen J.

    Genome Biology 2006, 7:320 commentreviewsreportsdepositedresearchinteractionsinformationrefereedresearch Meeting report Mobile DNA: genomes under the influence Cédric Feschotte and Ellen J Pritham Feschotte. Email: cedric@uta.edu Published: 30 June 2006 Genome Biology 2006, 7:320 (doi:10.1186/gb-2006

  7. FINAL REPORT FOR: OPTIMIZATION OF BIOLOGICAL

    E-Print Network [OSTI]

    AND SUSPENDED GROWTH WASTEWATER TREATMENT SYSTEM DECEMBER, 1994 Prepared for: Environment Canada Environment#12;FINAL REPORT FOR: OPTIMIZATION OF BIOLOGICAL PHOSPHORUS AND AMMONIA REMOVAL IN A COMBINED FIXED;Optimization of Biological Phosphorus and Ammonia Removal in a Combined Fixed & Suspended Growth System i

  8. Waste Handling and Disposal Biological Safety

    E-Print Network [OSTI]

    Pawlowski, Wojtek

    plumbing services, EHS personnel wastewater treatment plant personnel, and the general public canWaste Handling and Disposal Biological Safety General Biosafety Practices (GBP) Why You Should Care on the next experiment. Are you working with r/sNA, biological toxins, human materials, needles, plasticware

  9. Aspects of the political economy of development and synthetic biology

    E-Print Network [OSTI]

    Wellhausen, Rachel

    What implications might synthetic biology’s potential as a wholly new method of production have for the world economy, particularly developing countries? Theories of political economy predict that synthetic biology can ...

  10. ASTRONOMY BIOLOGY CHEMISTRY COMPUTER-SCIENCE GEOGRAPHY MATHEMATICS PHYSICS STATISTICS

    E-Print Network [OSTI]

    Bernstein, Phil

    BIOMEDICAL-ENGINEERING ELECTRONIC- ENGINEERING ASTRONOMY BIOLOGY CHEMISTRY COMPUTER-SCIENCE GEOGRAPHY MATHEMATICS PHYSICS STATISTICS HEALTHCARE BIOMEDICAL-ENGINEERING ELECTRONIC-ENGINEERING ASTRONOMY BIOLOGY C H HEALTHCARE BIOMEDICAL-ENGINEERING ELECTRONIC-ENGINEERING ASTRONOMY BIOLOGY CHEMISTRY COMPUTER

  11. Crafting life : a sensory ethnography of fabricated biologies

    E-Print Network [OSTI]

    Roosth, Hannah Sophia

    2010-01-01T23:59:59.000Z

    This ethnography tracks a diverse set of practices I term "constructive biologies," by which I mean efforts in the post-genomic life sciences to understand how biology works by making new biological things. I examine five ...

  12. What rough beast? Synthetic Biology and the Future of Biosecurity

    E-Print Network [OSTI]

    Mohr, Scott C.

    Synthetic biology seeks to create modular biological parts that can be assembled into useful devices, allowing the modification of biological systems with greater reliability, at lower cost, with greater speed, and by a ...

  13. Method of measurement in biological systems

    DOE Patents [OSTI]

    Turteltaub, K.W.; Vogel, J.S.; Felton, J.S.; Gledhill, B.L.; Davis, J.C.

    1994-12-27T23:59:59.000Z

    Disclosed is a method of quantifying molecules in biological substances comprising: a. selecting a biological host in which radioisotopes are present in concentrations equal to or less than those in the ambient biosphere, b. preparing a long-lived radioisotope labeled reactive chemical specie, c. administering the chemical specie to the biological host in doses sufficiently low to avoid significant overt damage to the biological system, d. allowing a period of time to elapse sufficient for dissemination and interaction of the chemical specie with the host throughout the biological system of the host, e. isolating a reacted fraction of the biological substance from the host in a manner sufficient to avoid contamination of the substance from extraneous sources, f. converting the fraction of biological substance by suitable means to a material which efficiently produces charged ions in at least one of several possible ion sources without introduction of significant isotopic fractionation, and, g. measuring the radioisotope concentration in the material by means of direct isotopic counting. 5 figures.

  14. Micro/nanofabricated environments for synthetic biology

    SciTech Connect (OSTI)

    Collier, Pat [ORNL; Simpson, Michael L [ORNL

    2011-01-01T23:59:59.000Z

    A better understanding of how confinement, crowding and reduced dimensionality modulate reactivity and reaction dynamics will aid in the rational and systematic discovery of functionality in complex biological systems. Artificial micro- and nanofabricated structures have helped elucidate the effects of nanoscale spatial confinement and segregation on biological behavior, particularly when integrated with microfluidics, through precise control in both space and time of diffusible signals and binding interactions. Examples of nanostructured interfaces for synthetic biology include the development of cell-like compartments for encapsulating biochemical reactions, nanostructured environments for fundamental studies of diffusion, molecular transport and biochemical reaction kinetics, and regulation of biomolecular interactions as functions of micro- and nanofabricated topological constraints.

  15. advanced biological treatment: Topics by E-print Network

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Patrice Ct DALHOUSIE UNIVERSITY 12;BIOL 3020.03 Advanced Cell Biology Syllabus Page 2 Course description For a cell to function Adl, Sina 2 Biological Cybernetics...

  16. XPS Analysis of Nanostructured Materials and Biological Surfaces...

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Analysis of Nanostructured Materials and Biological Surfaces. XPS Analysis of Nanostructured Materials and Biological Surfaces. Abstract: This paper examines the types of...

  17. Techno-Economic Boundary Analysis of Biological Pathways to Hydrogen...

    Office of Energy Efficiency and Renewable Energy (EERE) Indexed Site

    Techno-Economic Boundary Analysis of Biological Pathways to Hydrogen Production (2009) Techno-Economic Boundary Analysis of Biological Pathways to Hydrogen Production (2009)...

  18. Biologically Enhanced Carbon Sequestration: Research Needs and Opportunities

    E-Print Network [OSTI]

    Oldenburg, Curtis M.

    2008-01-01T23:59:59.000Z

    Enhancement of soil carbon sequestration by amendment withBiologically Enhanced Carbon Sequestration: Research Needson Biologically Enhanced Carbon Sequestration, October 29,

  19. BE.442 Molecular Structure of Biological Materials, Fall 2005

    E-Print Network [OSTI]

    Zhang, Shuguang, Dr.

    Basic molecular structural principles of biological materials. Molecular structures of various materials of biological origin, including collagen, silk, bone, protein adhesives, GFP, self-assembling peptides. Molecular ...

  20. A Systems Biology Approach to Infectious Disease Research: Innovating...

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Systems Biology Approach to Infectious Disease Research: Innovating the Pathogen-Host Research Paradigm. A Systems Biology Approach to Infectious Disease Research: Innovating the...

  1. Comparative systems biology across an evolutionary gradient within...

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    systems biology across an evolutionary gradient within the Shewanella genus . Comparative systems biology across an evolutionary gradient within the Shewanella genus . Abstract: To...

  2. Biological and Chemical Approaches to Diseases

    E-Print Network [OSTI]

    Morimoto, Richard

    , chaperones, heat shock response, protein folding and misfolding, unfolded protein response Abstract Many that proteostasis is influenced both by an adjustable proteostasis network capacity and protein folding energetics INTRODUCTION . . . . . . . . . . . . . . . . . . 960 PROTEIN FOLDING IN VITRO . . . 961 BIOLOGICALLY ASSISTED

  3. VEHICLE OPERATING PROCEDURES DEPARTMENT OF BIOLOGICAL SCIENCE

    E-Print Network [OSTI]

    Ronquist, Fredrik

    VEHICLE OPERATING PROCEDURES DEPARTMENT OF BIOLOGICAL SCIENCE GENERAL INFORMATION Vehicles resposniblity and disciplinary action. Vehicles may be used by faculty or staff from other departments complete the vehicle usage agreement form certifying that they have a valid driver's license

  4. Technical Working Group on Biological Evidence Preservation

    E-Print Network [OSTI]

    Perkins, Richard A.

    of Forensic Science (AAFS) Annual Meeting Thursday, February 20, 2014 #12;The State of Biological Evidence Dennis Davenport, Senior Crime Scene Investigator, Commerce City PD Rock Harmon, Consultant, DNARock

  5. BIOMEDICAL ENGINEERING CHEMICAL AND BIOLOGICAL ENGINEERING

    E-Print Network [OSTI]

    Heller, Barbara

    BIOMEDICAL ENGINEERING CHEMICAL AND BIOLOGICAL ENGINEERING CIVIL, ARCHITECTURAL, AND ENVIRONMENTAL ENGINEERING ELECTRICAL AND COMPUTER ENGINEERING MECHANICAL, MATERIALS, AND AEROSPACE ENGINEERING COLLEGE OF ENGINEERING IIT ARMOUR #12;WHY ENGINEERINGAT IIT ARMOUR? Five Departments. One Distinctive Educational

  6. BIOLOGICAL & AGRICULTURAL ENGINEERING DEPARTMENT POSITION ANNOUNCEMENT

    E-Print Network [OSTI]

    BIOLOGICAL & AGRICULTURAL ENGINEERING DEPARTMENT POSITION ANNOUNCEMENT Position Title: Assistant/Associate Professor and Extension Specialist (Water/Wastewater Engineering) Appointment: 70% Texas A&M Agri) and other environmental issues of concern to rural communities, agricultural producers, agri

  7. The Biology of Some Kansas Eumenidae

    E-Print Network [OSTI]

    Isely, Dwight

    1913-01-01T23:59:59.000Z

    This paper is based on field observations and collections made by the author while connected with the Biological Survey of the University of Kansas, in Northwestern Kansas, during the summer of 1912. Specimens of fully ...

  8. Stochastic modeling of biological sequence evolution

    E-Print Network [OSTI]

    Xu, Keyuan

    2005-01-01T23:59:59.000Z

    Markov models of sequence evolution are a fundamental building block for making inferences in biological research. This thesis reviews several major techniques developed to estimate parameters of Markov models of sequence ...

  9. Biological applications of weal polyelectrolyte multilayers

    E-Print Network [OSTI]

    Berg, Michael C., Ph. D. Massachusetts Institute of Technology

    2005-01-01T23:59:59.000Z

    This thesis research focused on biological applications of ultra-thin weak polyelectrolyte multilayers with specific emphasis on cell patterning, drug delivery, and antibacterial coatings. All of these very different ...

  10. Genetics and molecular biology of breast cancer

    SciTech Connect (OSTI)

    King, M.C. [California Univ., Berkeley, CA (United States); Lippman, M. [Georgetown Univ. Medical Center, Washington, DC (United States)] [comps.

    1992-12-31T23:59:59.000Z

    This volume contains the abstracts of oral presentations and poster sessions presented at the Cold Springs Harbor Meeting on Cancer Cells, this meeting entitled Genetics and Molecular Biology of Breast Cancer.

  11. Elizabeth R. Dumont Department of Biology

    E-Print Network [OSTI]

    Dumont, Elizabeth R.

    collection on the biology- engineering interface" (P.I.) Direct Costs: $670,425 (includes $7,500 REU, UMass Amherst. 2007 Plenary Speaker, 14th International Bat Research Congress, Merida, Mexico 2006

  12. Complexity and Systems Biology of Microbial Biofuels

    E-Print Network [OSTI]

    Rand, David

    Complexity and Systems Biology of Microbial Biofuels 20-24 June 2011 (All and issues Theme: Biofuel systems and issues (Chair: Nigel Burroughs) 13 (Bielefeld) Biofuels from algae- challenges for industrial levels

  13. TCD-IISc Symposium "Chemistry & Chemical Biology"

    E-Print Network [OSTI]

    O'Mahony, Donal E.

    actinide chemistry, with a focus on coordination and organometallic uranium chemistry. Paula ColavitaTCD-IISc Symposium "Chemistry & Chemical Biology" Trinity College Clive Williams, Dean of Chemistry. Research areas include supramolecular organic and inorganic chemistry and medicinal chemistry

  14. Nanotechnology: emerging tools for biology and medicine

    E-Print Network [OSTI]

    Wong, Ian Y.

    Historically, biomedical research has been based on two paradigms. First, measurements of biological behaviors have been based on bulk assays that average over large populations. Second, these behaviors have then been ...

  15. Statistical methods to infer biological interactions

    E-Print Network [OSTI]

    Tucker, George Jay

    2014-01-01T23:59:59.000Z

    Biological systems are extremely complex, and our ability to experimentally measure interactions in these systems is limited by inherent noise. Technological advances have allowed us to collect unprecedented amounts of raw ...

  16. Size adjustable separation of biologically active molecules

    E-Print Network [OSTI]

    Gutierrez, Mauricio R. (Mauricio Roberto)

    2004-01-01T23:59:59.000Z

    Separation of biologically active molecules (BAM's) is a problem for the pharmaceutical and biotechnology industries. Current technologies addressing this problem require too many techniques, toxic additives, and time to ...

  17. Molecular Mechanism of Biological Proton Transport

    SciTech Connect (OSTI)

    Pomes, R.

    1998-09-01T23:59:59.000Z

    Proton transport across lipid membranes is a fundamental aspect of biological energy transduction (metabolism). This function is mediated by a Grotthuss mechanism involving proton hopping along hydrogen-bonded networks embedded in membrane-spanning proteins. Using molecular simulations, the authors have explored the structural, dynamic, and thermodynamic properties giving rise to long-range proton translocation in hydrogen-bonded networks involving water molecules, or water wires, which are emerging as ubiquitous H{sup +}-transport devices in biological systems.

  18. Frontiers of NMR in Molecular Biology

    SciTech Connect (OSTI)

    NONE

    1999-08-25T23:59:59.000Z

    NMR spectroscopy is expanding the horizons of structural biology by determining the structures and describing the dynamics of blobular proteins in aqueous solution, as well as other classes of proteins including membrane proteins and the polypeptides that form the aggregates diagnostic of prion and amyloid diseases. Significant results are also emerging on DNA and RNA oligomers and their complexes with proteins. This meeting focused attention on key structural questions emanating from molecular biology and how NMR spectroscopy can be used to answer them.

  19. APPLICATION FOR STEVENS SCHOLARSHIP Department of Biological Sciences

    E-Print Network [OSTI]

    Rock, Chris

    :_____ Total Credit Hours Completed: __________ Transferred Credit Hours: __________ Biology Quality Points University Course Prefix Course Number Semester Letter Grade Grade Points Biology Quality Points e.g. BIOL 1403 A 4 16 Summed Biology Quality Points: *Biology courses include all with the prefixes: BIOL, BOT

  20. Agricultural & Biological Engineering Alumni Newsletter. Winter 2009 ABE@Illinois

    E-Print Network [OSTI]

    Gilbert, Matthew

    Agricultural & Biological Engineering Alumni Newsletter. Winter 2009 ABE@Illinois WINTER2009 Triple Crown for Illinois's Agricultural and Biological Engineering Program The Agricultural and Biological of Agricultural and Biological Engineering held its first annual "Celebrate ABE@Illinois" on September 5th and 6th

  1. MONOTONE INPUT/OUTPUT SYSTEMS, AND APPLICATIONS TO BIOLOGICAL SYSTEMS

    E-Print Network [OSTI]

    Enciso, Germán

    . iii #12;Preface: From Tycho Brahe To Microarrays How does mathematics fit into modern biology research

  2. 7.012 Introduction to Biology, Fall 2001

    E-Print Network [OSTI]

    Weinberg, Robert A. (Robert Allan), 1942-

    Cell biology, immunology, neurobiology, and an exploration into current research in cancer, genomics, and molecular medicine.

  3. BIOLOGY INTERNATIONAL The Official Journal of the International Union of Biological Sciences

    E-Print Network [OSTI]

    Slik, Ferry

    , RMIT University School of Civil, Environmental and Chemical Engineering, Building 10, level 12, 376 of Environmental Biology University of Guelph, Guelph, ON N3C 2B7, Canada e-mail: pkevan@uoguelph.ca Nicholas 1TN, UK e-mail: nmt1@cam.ac.uk Ralf Reski, Head, Plant Biotechnology, Faculty of Biology, University

  4. Comparative Microbial Genomics group CenterforBiologicalSequenceanalysisDepartmentofSystemsBiology,TechnicalUniversityofDenmark

    E-Print Network [OSTI]

    Ussery, David W.

    Comparative Microbial Genomics group CenterforBiologicalSequenceanalysisDepartmentofSystemsBiology,TechnicalUniversityofDenmark E. coli pangenomics - or - How to compare hundreds of E. coli genomes Fuzzy Dave Ussery Ullevål Universitetssykehus Oslo, Norway Wednesday, 10 December, 2008 #12;Comparative Microbial Genomics group Centerfor

  5. Comparative Microbial Genomics group CenterforBiologicalSequenceanalysisDepartmentofSystemsBiology,TechnicalUniversityofDenmark

    E-Print Network [OSTI]

    Ussery, David W.

    Comparative Microbial Genomics group CenterforBiologicalSequenceanalysisDepartmentofSystemsBiology,TechnicalUniversityofDenmark Burkholderia Pan-genomics Dave Ussery Max Planck Institut fur Terrestrial Microbiology Marburg, Germany 26 May, 2008 - or - What can we learn from more than 50 sequenced genomes? #12;Comparative Microbial Genomics

  6. The Evolutionary Systems Biology Team Synthetic Biology/Citizen Science Post-doctoral position

    E-Print Network [OSTI]

    The Evolutionary Systems Biology Team Synthetic Biology/Citizen Science Post-doctoral position We in citizen science projects.The post-doc will join the extended CRI lab that includes synthetic and systems-sourcing, DIY approaches and gamification as part of a new European- funded project, Citizen CyberLab - a three

  7. Quantum metrology and its application in biology

    E-Print Network [OSTI]

    Michael A. Taylor; Warwick P. Bowen

    2014-09-03T23:59:59.000Z

    Quantum metrology provides a route to overcome practical limits in sensing devices. It holds particular relevance in biology, where sensitivity and resolution constraints restrict applications both in fundamental biophysics and in medicine. Here, we review quantum metrology from this biological context. The understanding of quantum mechanics developed over the past century has already enabled important applications in biology, including positron emission tomography (PET) with entangled photons, magnetic resonance imaging (MRI) using nuclear magnetic resonance, and bio-magnetic imaging with superconducting quantum interference devices (SQUIDs). With the birth of quantum information science came the realization that an even greater range of applications arise from the ability to not just understand, but to engineer coherence and correlations in systems at the quantum level. In quantum metrology, quantum coherence and quantum correlations are engineered to enable new approaches to sensing. This review focusses specifically on optical quantum metrology, where states of light that exhibit non-classical photon correlations are used to overcome practical and fundamental constraints, such as the shot-noise and diffraction limits. Recent experiments have demonstrated quantum enhanced sensing of biological systems, and established the potential for quantum metrology in biophysical research. These experiments have achieved capabilities that may be of significant practical benefit, including enhanced sensitivity and resolution, immunity to imaging artifacts, and characterisation of the biological response to light at the single-photon level. New quantum measurement techniques offer even greater promise, raising the prospect for improved multi-photon microscopy and magnetic imaging, among many other possible applications.

  8. Computational Biology and High Performance Computing 2000

    SciTech Connect (OSTI)

    Simon, Horst D.; Zorn, Manfred D.; Spengler, Sylvia J.; Shoichet, Brian K.; Stewart, Craig; Dubchak, Inna L.; Arkin, Adam P.

    2000-10-19T23:59:59.000Z

    The pace of extraordinary advances in molecular biology has accelerated in the past decade due in large part to discoveries coming from genome projects on human and model organisms. The advances in the genome project so far, happening well ahead of schedule and under budget, have exceeded any dreams by its protagonists, let alone formal expectations. Biologists expect the next phase of the genome project to be even more startling in terms of dramatic breakthroughs in our understanding of human biology, the biology of health and of disease. Only today can biologists begin to envision the necessary experimental, computational and theoretical steps necessary to exploit genome sequence information for its medical impact, its contribution to biotechnology and economic competitiveness, and its ultimate contribution to environmental quality. High performance computing has become one of the critical enabling technologies, which will help to translate this vision of future advances in biology into reality. Biologists are increasingly becoming aware of the potential of high performance computing. The goal of this tutorial is to introduce the exciting new developments in computational biology and genomics to the high performance computing community.

  9. The acquisition of dangerous biological materials :

    SciTech Connect (OSTI)

    Aceto, Donato Gonzalo; Astuto-Gribble, Lisa M.; Gaudioso, Jennifer M.

    2007-11-01T23:59:59.000Z

    Numerous terrorist organizations have openly expressed interest in producing and deploying biological weapons. However, a limiting factor for many terrorists has been the acquisition of dangerous biological agents, as evidenced by the very few successful instances of biological weapons use compared to the number of documented hoaxes. Biological agents vary greatly in their ability to cause loss of life and economic damage. Some agents, if released properly, can kill many people and cause an extensive number of secondary infections; other agents will sicken only a small number of people for a short period of time. Consequently, several biological agents can potentially be used to perpetrate a bioterrorism attack but few are likely capable of causing a high consequence event. It is crucial, from a US national security perspective, to more deeply understand the likelihood that terrorist organizations can acquire the range of these agents. Few studies have attempted to comprehensively compile the technical information directly relevant to the acquisition of dangerous bacteria, viruses and toxins. In this report, technical fact sheets were assembled for 46 potentially dangerous biological agents. Much of the information was taken from various research sources which could ultimately and significantly expedite and improve bioterrorism threat assessments. By systematically examining a number of specific agent characteristics included in these fact sheets, it may be possible to detect, target, and implement measures to thwart future terrorist acquisition attempts. In addition, the information in these fact sheets may be used as a tool to help laboratories gain a rudimentary understanding of how attractive a method laboratory theft is relative to other potential acquisition modes.

  10. Spectroscopic diagnostics for bacteria in biologic sample

    DOE Patents [OSTI]

    El-Sayed, Mostafa A. (Atlanta, GA); El-Sayed, Ivan H. (Somerville, MA)

    2002-01-01T23:59:59.000Z

    A method to analyze and diagnose specific bacteria in a biologic sample using spectroscopy is disclosed. The method includes obtaining the spectra of a biologic sample of a non-infected patient for use as a reference, subtracting the reference from the spectra of an infected sample, and comparing the fingerprint regions of the resulting differential spectrum with reference spectra of bacteria in saline. Using this diagnostic technique, specific bacteria can be identified sooner and without culturing, bacteria-specific antibiotics can be prescribed sooner, resulting in decreased likelihood of antibiotic resistance and an overall reduction of medical costs.

  11. Biology and Medicine Division: Annual report 1986

    SciTech Connect (OSTI)

    Not Available

    1987-04-01T23:59:59.000Z

    The Biology and Medicine Division continues to make important contributions in scientific areas in which it has a long-established leadership role. For 50 years the Division has pioneered in the application of radioisotopes and charged particles to biology and medicine. There is a growing emphasis on cellular and molecular applications in the work of all the Division's research groups. The powerful tools of genetic engineering, the use of recombinant products, the analytical application of DNA probes, and the use of restriction fragment length polymorphic DNA are described and proposed for increasing use in the future.

  12. Biological doses with template distribution patterns

    SciTech Connect (OSTI)

    Harrop, R. (Simon Fraer Univ., Burnaby, British Columbia); Haymond, H.R.; Nisar, A.; Syed, A.N.M.; Feder, B.H.; Neblett, D.L.

    1981-02-01T23:59:59.000Z

    Consideration of radiation dose rate effects emphasizes advantages of the template method for lateral distribution of multiple sources in treatment of laterally infiltrating gynecologic cancer, when compared to a conventional technique with colpostats. Biological doses in time dose fractionation (TDF), ret and reu units are calculated for the two treatment methods. With the template method the lateral dose (point B) is raised without significantly increasing the doses to the rectum and bladder, that is, relatively, the calculated biological doses at point A and B are more nearly equivalent and the doses to the rectum and bladder are significantly lower than the dose to point B.

  13. Biology and Soft Matter | ornl.gov

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative1 First Use of Energy for All Purposes (Fuel and Nonfuel), 2002; Level: National5Sales for4,645U.S. DOE Office511041clothAdvanced Materials Advanced Materials Find Find More LikeAndreasHelp(SC) BiologicalBiology

  14. Systems Modeling for Prognostic Cancer Biology

    E-Print Network [OSTI]

    Maccabe, Barney

    goal of this research is the development of personalized treatments in cancer, based on the genomic and treatment. A major challenge in contemporary cancer diagnosis and treatment is the development Systems Modeling for Prognostic Cancer Biology Xuefei Wang1 , BaiLian Li2 , Cheryl L. Willman

  15. Statistical Applications in Genetics and Molecular Biology

    E-Print Network [OSTI]

    California at Berkeley, University of

    groups of childhood leukemia patients: acute myeloid leukemia (AML) and acute lymphoblastic leukemia (ALL testing, preprocessing, leukemia, tail probability Merrill D. Birkner is a trainee of the U.C. Berkeley of the Northern California Childhood Leukemia Study, for access to the biological samples. This study

  16. Energy use by biological protein transport pathways

    E-Print Network [OSTI]

    Economou, Tassos

    Energy use by biological protein transport pathways Nathan N. Alder1 and Steven M. Theg2 1 of metabolic energy, using the free energy of ATP and GTP hydrolysis and/or a transmembrane protonmotive force provided insights into the mechanisms of energy transduction, force generation and energy use by different

  17. Biological effectiveness of neutrons: Research needs

    SciTech Connect (OSTI)

    Casarett, G.W.; Braby, L.A.; Broerse, J.J.; Elkind, M.M.; Goodhead, D.T.; Oleinick, N.L.

    1994-02-01T23:59:59.000Z

    The goal of this report was to provide a conceptual plan for a research program that would provide a basis for determining more precisely the biological effectiveness of neutron radiation with emphasis on endpoints relevant to the protection of human health. This report presents the findings of the experts for seven particular categories of scientific information on neutron biological effectiveness. Chapter 2 examines the radiobiological mechanisms underlying the assumptions used to estimate human risk from neutrons and other radiations. Chapter 3 discusses the qualitative and quantitative models used to organize and evaluate experimental observations and to provide extrapolations where direct observations cannot be made. Chapter 4 discusses the physical principles governing the interaction of radiation with biological systems and the importance of accurate dosimetry in evaluating radiation risk and reducing the uncertainty in the biological data. Chapter 5 deals with the chemical and molecular changes underlying cellular responses and the LET dependence of these changes. Chapter 6, in turn, discusses those cellular and genetic changes which lead to mutation or neoplastic transformation. Chapters 7 and 8 examine deterministic and stochastic effects, respectively, and the data required for the prediction of such effects at different organizational levels and for the extrapolation from experimental results in animals to risks for man. Gaps and uncertainties in this data are examined relative to data required for establishing radiation protection standards for neutrons and procedures for the effective and safe use of neutron and other high-LET radiation therapy.

  18. Bioreactor Development for Biological Hydrogen Production

    E-Print Network [OSTI]

    Bioreactor Development for Biological Hydrogen Production Edward J. Wolfrum, Andrew S. Watt, Jie and reactor pressure on the volumetric pro- ductivity of trickle bed bioreactors. The apparent rate constant research focuses on using well- defined bioreactor geometries to collect quantitative reactor performance

  19. Genome Biology 2004, 6:302 commentreviewsreportsdepositedresearchinteractionsinformationrefereedresearch

    E-Print Network [OSTI]

    Gent, Universiteit

    Genome Biology 2004, 6, Technologiepark 927, B-9052 Ghent, Belgium. E-mail: Yves.vandepeer@psb.ugent.be Published: 21 December 2004 Genome at http://genomebiology.com/2004/6/1/302 © 2004 BioMed Central Ltd A report on the Plant Genomics European

  20. Molecular Biology Basics Planning Restriction Enzyme Digests

    E-Print Network [OSTI]

    Aris, John P.

    Molecular Biology Basics Planning Restriction Enzyme Digests A. Checklist: Buffer type Addition of BSA Optimum temperature Number of units of enzyme B. Plan to digest DNA with an "excess" of enzyme activity. Plan for the "excess" to be divided between time of digestion and number of units of enzyme

  1. Apparatus for automated testing of biological specimens

    DOE Patents [OSTI]

    Layne, Scott P. (Los Angeles, CA); Beugelsdijk, Tony J. (Los Alamos, NM)

    1999-01-01T23:59:59.000Z

    An apparatus for performing automated testing of infections biological specimens is disclosed. The apparatus comprise a process controller for translating user commands into test instrument suite commands, and a test instrument suite comprising a means to treat the specimen to manifest an observable result, and a detector for measuring the observable result to generate specimen test results.

  2. VEHICLE USAGE AGREEMENT DEPARTMENT OF BIOLOGICAL SCIENCE

    E-Print Network [OSTI]

    Ronquist, Fredrik

    VEHICLE USAGE AGREEMENT DEPARTMENT OF BIOLOGICAL SCIENCE All drivers of vehicles must certify to the following: 1. I certify that I have a valid driver's license appropriate for the vehicle type and will abide belts. 2. I have read and understand the vehicle operating policies and procedures as defined

  3. Genome Biology 2005, 6:R47 commentreviewsreportsdepositedresearchrefereedresearchinteractionsinformation

    E-Print Network [OSTI]

    and Computational Biology Unit, Laboratory of Genetics National Institute on Aging, National Institutes of Health on media that conveniently allowed reproduction. The advent of digital detectors in microscopy has that linearly measures the flux of light at different points in a cell or tissue. Almost all the vast clinical

  4. Composites comprising biologically-synthesized nanomaterials

    DOE Patents [OSTI]

    Curran, Seamus; Dias, Sampath; Blau, Werner; Wang, Jun; Oremland, Ronald S; Baesman, Shaun

    2013-04-30T23:59:59.000Z

    The present disclosure describes composite materials containing a polymer material and a nanoscale material dispersed in the polymer material. The nanoscale materials may be biologically synthesized, such as tellurium nanorods synthesized by Bacillus selenitireducens. Composite materials of the present disclosure may have optical limiting properties and find use in optical limiting devices.

  5. Institute for Multiscale Modeling of Biological Interactions

    SciTech Connect (OSTI)

    Paulaitis, Michael E; Garcia-Moreno, Bertrand; Lenhoff, Abraham

    2009-12-26T23:59:59.000Z

    The Institute for Multiscale Modeling of Biological Interactions (IMMBI) has two primary goals: Foster interdisciplinary collaborations among faculty and their research laboratories that will lead to novel applications of multiscale simulation and modeling methods in the biological sciences and engineering; and Building on the unique biophysical/biology-based engineering foundations of the participating faculty, train scientists and engineers to apply computational methods that collectively span multiple time and length scales of biological organization. The success of IMMBI will be defined by the following: Size and quality of the applicant pool for pre-doctoral and post-doctoral fellows; Academic performance; Quality of the pre-doctoral and post-doctoral research; Impact of the research broadly and to the DOE (ASCR program) mission; Distinction of the next career step for pre-doctoral and post-doctoral fellows; and Faculty collaborations that result from IMMBI activities. Specific details about accomplishments during the three years of DOE support for IMMBI have been documented in Annual Progress Reports (April 2005, June 2006, and March 2007) and a Report for a National Academy of Sciences Review (October 2005) that were submitted to DOE on the dates indicated. An overview of these accomplishments is provided.

  6. MASTER OF ENGINEERING Biological and Environmental Engineering

    E-Print Network [OSTI]

    Walter, M.Todd

    MASTER OF ENGINEERING Biological and Environmental Engineering Program Requirements Fall 2013 The Master of Engineering (MEng) is a professional degree program intended for those who have a Bachelors degree or equivalent in an engineering or closely related science field from a college or university

  7. MASTER OF ENGINEERING Biological and Environmental Engineering

    E-Print Network [OSTI]

    Walter, M.Todd

    MASTER OF ENGINEERING Biological and Environmental Engineering Program Requirements Fall 2014 The Master of Engineering (MEng) is a professional degree program intended for those who have a Bachelors degree or equivalent in an engineering or closely related science field from a college or university

  8. Artificial Homeostasis: Integrating Biologically Inspired Computing

    E-Print Network [OSTI]

    Kent, University of

    - mune systems and a novel artificial endocrine system. The natural counterparts of these three of these artificial systems to yield artificially homeostatic systems. The components develop in a common envi. Thus we propose to consider the artificial counterparts of these three biological systems. The use

  9. Brent Craig Christner Department of Biological Sciences

    E-Print Network [OSTI]

    Christner, Brent C.

    , 1996. Thesis advisor: John J. Rowe B.S., Molecular Biology and Biotechnology, Westminster College, New. Assistant Research Professor, August 2004-2006. Department of Land Resources and Environmental Sciences of John C. Priscu, Department of Land Resources and Environmental Sciences, Montana State University

  10. Brent Craig Christner Department of Biological Sciences

    E-Print Network [OSTI]

    Christner, Brent C.

    , Ohio, 1996. Thesis advisor: John J. Rowe B.S., Molecular Biology and Biotechnology, Westminster College Resources and Environmental Sciences, Montana State University, Bozeman, Montana. Postdoctoral Researcher, June 2002-August 2004. Laboratory of John C. Priscu, Department of Land Resources and Environmental

  11. Mentor Program Information Division of Biology

    E-Print Network [OSTI]

    Kaufman, Glennis A.

    Mentor Program Information Division of Biology 116 Ackert Hall Manhattan, KS 66506 Kansas State will never be released for public information unless requested by the mentor. It is used only if a current K-State student requests to speak with a specific mentor and is kept private until that time. However, it may

  12. Physics Meets Biology (LBNL Summer Lecture Series)

    ScienceCinema (OSTI)

    Chu, Steve [Director, LBNL

    2011-04-28T23:59:59.000Z

    Summer Lecture Series 2006: If scientists could take advantage of the awesomely complex and beautiful functioning of biologys natural molecular machines, their potential for application in many disciplines would be incalculable. Nobel Laureate and Director of the Lawrence Berkeley National Laboratory Steve Chu explores Possible solutions to global warming and its consequences.

  13. THE COMPARATIVE VALUE OF BIOLOGICAL CARBON SEQUESTRATION

    E-Print Network [OSTI]

    McCarl, Bruce A.

    THE COMPARATIVE VALUE OF BIOLOGICAL CARBON SEQUESTRATION BRUCE A. MCCARL, BRIAN C. MURRAY, AND UWE A. SCHNEIDER A. Abstract Carbon sequestration via forests and agricultural soils saturates over time to sequestration because of (1) an ecosystems limited ability to take up carbon which we will call saturation

  14. Synthetic biology and the conservation of biodiversity

    E-Print Network [OSTI]

    Redford, Kent H.; Adams, William; Carlson, Rob; Mace, Georgina M.; Ceccarelli, Bertina

    2014-04-22T23:59:59.000Z

    reference to previous debates about land acquisition to grow biofuels, the production 202 of biologically-based chemicals and plastics, and the industrial burning of biomass. 203 Yet not all technologies are the same, nor are the people who use them...

  15. Biological consequences of Chernobyl: 20 years on

    E-Print Network [OSTI]

    Mousseau, Timothy A.

    Biological consequences of Chernobyl: 20 years on Anders Pape Møller1 and Timothy A. Mousseau2 1, University of South Carolina, Columbia, SC 29208, USA The disaster at the Chernobyl nuclear power plant of the four nuclear reactors of the Chernobyl nuclear power plant exploded on 26 April 1986 as a consequence

  16. Genome Biology 2003, 4:R43 commentreviewsreportsdepositedresearchrefereedresearchinteractionsinformation

    E-Print Network [OSTI]

    Kellis, Manolis

    , Massachusetts Institute of Technology, Cambridge, MA 02139, USA. §Whitehead/MIT Center for Genome Research, Department of Biology, Massachusetts Institute of Technology, Cambridge, MA 02139, USA. ¶Department of Genome conserved word pairs associated with gene-expression changes in yeastsTranscriptional regulation

  17. Methodology in Biological Game Simon M. Huttegger

    E-Print Network [OSTI]

    Zollman, Kevin

    ;Huttegger and Zollman Methodology in Biological Game Theory ESS Method Describe a game Find all the stable states (ESS) If there is only one, conclude this one is evolutionarily significant #12;Huttegger An Evolutionarily Stable Strategy (ESS) Pooling equilibrium Not an ESS Hybrid equilibrium Not an ESS #12;Huttegger

  18. Characterization and Control of Biological Microrobots

    E-Print Network [OSTI]

    magnetic system is five orders-of-magnitude less than the propulsion force gener- ated by the flagellum proposed for propulsion: extracting energy from an ex- ternal magnetic field [4], or extracting energy from of Magnetotactic Bacterium (MTB) which can be considered as a biological microrobot. Magnetic dipole moment

  19. School of Biological Sciences Undergraduate Scholarships & Awards

    E-Print Network [OSTI]

    Barrett, Jeffrey A.

    School of Biological Sciences Undergraduate Scholarships & Awards The following items are due not submit any additional items. 4. Award winners will be notified during the middle of May. 5. To be eligible for any Bio Sci Scholarships/Awards you must be a U.S. citizen, an eligible non

  20. Increasing Public Involvement in Structural Biology

    E-Print Network [OSTI]

    Baker, David

    --often referred to as citizen science--provides a means of engaging people's skills, rather than just for the public to get actively involved in structural biology research? Citizen science projects can require areas for citizen science as structural problems both are amenable to human spatial-reasoning skills

  1. Genome Biology 2007, 8:R34 commentreviewsreportsdepositedresearchrefereedresearchinteractionsinformation

    E-Print Network [OSTI]

    Shneiderman, Ben

    Genome Biology 2007, 8:R34 analytics tool for genome assemblies Michael C Schatz*, Adam M Phillippy*, Ben Shneiderman and Steven L the original work is properly cited. Hawkeye: a visual analytics tool for genome assembliesHawkeye is a new

  2. Simultaneous wastewater treatment and biological electricity generation

    E-Print Network [OSTI]

    Simultaneous wastewater treatment and biological electricity generation B.E. Logan Department accomplishing wastewater treatment in processes based on microbial fuel cell technologies. When bacteria oxidize.4 £ 106 L of wastewater, a wastewater treatment plant has the potential to become a 2.3 MW power plant

  3. Nanotechnology: emerging tools for biology and medicine

    E-Print Network [OSTI]

    Bhatia, Sangeeta

    REVIEW Nanotechnology: emerging tools for biology and medicine Ian Y. Wong,1,2,10 Sangeeta N administration of thera- peutic treatments. Nanotechnology has the potential to transform these paradigms and physical functionality at small length scales. Here, we review nanotechnology- based approaches

  4. GOVERNANCE DOCUMENT DEPARTMENT OF INTEGRATIVE BIOLOGY

    E-Print Network [OSTI]

    Lajeunesse, Marc J.

    1 GOVERNANCE DOCUMENT DEPARTMENT OF INTEGRATIVE BIOLOGY January 23, 2014 The faculty otherwise specified, the following document refers to the IB Department and its personnel only. 1 with the Regular Faculty. The Search Committee will develop a list of candidates, manage the interviews

  5. Biologically Plausible Neural Model for the Recognition of Biological Motion and Actions

    E-Print Network [OSTI]

    Giese, Martin Alexander

    2002-08-01T23:59:59.000Z

    The visual recognition of complex movements and actions is crucial for communication and survival in many species. Remarkable sensitivity and robustness of biological motion perception have been demonstrated in ...

  6. BIOLOGICAL AND MICROBIAL CONTROL Biology and Rearing of Cleruchoides noackae (Hymenoptera

    E-Print Network [OSTI]

    : Mymaridae), an Egg Parasitoid for the Biological Control of Thaumastocoris peregrinus (Hemiptera egg para- sitoid of Thaumastocoris peregrinus Carpintero and Dellape´ (Hemiptera: Thaumastocoridae peregrinus Carpintero and Dellape´ (Hemiptera: Thaumastocoridae) is a se- rious and widespread pest

  7. Three-dimensionally printed biological machines powered by skeletal muscle

    E-Print Network [OSTI]

    Chan, Vincent

    Combining biological components, such as cells and tissues, with soft robotics can enable the fabrication of biological machines with the ability to sense, process signals, and produce force. An intuitive demonstration of ...

  8. AGRICULTURAL & BIOLOGICAL ENGINEERING FALL 2013 INSIDE THIS ISSUE

    E-Print Network [OSTI]

    Gilbert, Matthew

    AGRICULTURAL & BIOLOGICAL ENGINEERING FALL 2013 INSIDE THIS ISSUE: · ABESpring of Agricultural and Biological Engineering of the College of Agricultural, Consumer and Environmental Sciences and the College of Engineering at the University of Illinois at Urbana Champaign. 338 Agricultural Engineering

  9. Multispectral optical tweezers for molecular diagnostics of single biological cells

    E-Print Network [OSTI]

    Wu, Shin-Tson

    Multispectral optical tweezers for molecular diagnostics of single biological cells Author, Townes Laser Institute, CREOL ­ The College of Optics and Photonics, Univ. of Central Florida (United States) ABSTRACT Optical trapping of single biological cells has become an established technique

  10. MS.BIOLOGY.NON-THESIS ACADEMIC LEARNING PLAN

    E-Print Network [OSTI]

    O'Laughlin, Jay

    to constructive feedback Job Prospects for Biology Graduates MS/non-thesis in Biology Bioremediation Biotechnology Medical Research Industry Government Education Microbiology Health Professions Research Laboratories Find Food Production Pollution Control Environmental Diagnostics Forestry Agriculture #12;MS

  11. What Was Life? Answers from Three Limit Biologies

    E-Print Network [OSTI]

    Helmreich, Stefan

    2011-01-01T23:59:59.000Z

    What is life? A gathering consensus in anthropology, science studies, and philosophy of biology suggests that the theoretical object of biology, “life,” is today in transformation, if not dissolution. Proliferating ...

  12. Biochemistry & Molecular Biology Department of Environmental and Biomolecular Systems

    E-Print Network [OSTI]

    Chapman, Michael S.

    Biology _____ _____ _____ EBS 514 ­ Biochemistry III: Metabolism and Bioenergetics Biology _____ _____ _____ EBS 614 ­ Biochemistry III: Metabolism and Bioenergetics _____ _____ _____ Three (3) of the following courses are required: EBS 625 ­ Bioenergetics and Membrane Transport

  13. Project 198740100 Assessment of Smolt Condition: Biological and Environmental Interactions

    E-Print Network [OSTI]

    1 Project 198740100 Assessment of Smolt Condition: Biological and Environmental Interactions detailed investigations of environmental and biological factors that influence smolt development environmental factors influence fish development, condition, and long-term survival. The proposed tasks describe

  14. Extracting principles from biology for application to running robots

    E-Print Network [OSTI]

    Haberland, Matthew Daniel

    2014-01-01T23:59:59.000Z

    When millions of years of evolution suggest a particular design solution, we may be tempted to abandon traditional design methods and copy the biological example. However, biological solutions do not often translate directly ...

  15. The living commons : a spatial theory for biological design

    E-Print Network [OSTI]

    Telhan, Orkan

    2013-01-01T23:59:59.000Z

    Biological design is as ancient as human civilization. For thousands of years, living systems and natural processes have been manipulated by humans and their biological outcomes have been customized for different purposes. ...

  16. Chemistry meets biology in colitis-associated carcinogenesis

    E-Print Network [OSTI]

    Mangerich, Aswin

    The intestine comprises an exceptional venue for a dynamic and complex interplay of numerous chemical and biological processes. Here, multiple chemical and biological systems, including the intestinal tissue itself, its ...

  17. Boston University Physics Colloquium Microscale propulsion in biological and

    E-Print Network [OSTI]

    Mohanty, Raj

    Boston University Physics Colloquium Microscale propulsion in biological and engineered systems biological locomotion and engineered propulsion. In the first example, we examine swimming microorganisms the microstructure. In the second example, we examine engineered magnetic artificial microswimmers which can

  18. Drug Discovery and Development from Marine Biology-Based Research

    E-Print Network [OSTI]

    Jawitz, James W.

    Drug Discovery and Development from Marine Biology- Based Research Oceanyx Pharmaceuticals is a novel drug discovery and development company that leverages marine biology-based natural identified two lead candidates, largazole and apratoxin, as potential drug candidates for the treatment

  19. Nitrogen Atmospheric Pressure Post Discharges for Surface Biological Decontamination inside

    E-Print Network [OSTI]

    Paris-Sud XI, Université de

    Nitrogen Atmospheric Pressure Post Discharges for Surface Biological Decontamination inside Small) (PET) capillary tubes of different shapes and lengths and decontamination of flow tubes, both for several years at the Orsay Plasma Lab. Its biological decontamination efficiency has been demonstrated

  20. Biological Production of Hydrogen DOE Office of Science,

    E-Print Network [OSTI]

    .Houghton@science.doe.gov #12;Biology transforms energy in a series ofBiology transforms energy in a series University Artificial Chromosome: Minimum Genome Oligo Assembly Microalgae production facility of Cyanotech

  1. Complex biological and bio-inspired systems

    SciTech Connect (OSTI)

    Ecke, Robert E [Los Alamos National Laboratory

    2009-01-01T23:59:59.000Z

    The understanding and characterization ofthe fundamental processes of the function of biological systems underpins many of the important challenges facing American society, from the pathology of infectious disease and the efficacy ofvaccines, to the development of materials that mimic biological functionality and deliver exceptional and novel structural and dynamic properties. These problems are fundamentally complex, involving many interacting components and poorly understood bio-chemical kinetics. We use the basic science of statistical physics, kinetic theory, cellular bio-chemistry, soft-matter physics, and information science to develop cell level models and explore the use ofbiomimetic materials. This project seeks to determine how cell level processes, such as response to mechanical stresses, chemical constituents and related gradients, and other cell signaling mechanisms, integrate and combine to create a functioning organism. The research focuses on the basic physical processes that take place at different levels ofthe biological organism: the basic role of molecular and chemical interactions are investigated, the dynamics of the DNA-molecule and its phylogenetic role are examined and the regulatory networks of complex biochemical processes are modeled. These efforts may lead to early warning algorithms ofpathogen outbreaks, new bio-sensors to detect hazards from pathomic viruses to chemical contaminants. Other potential applications include the development of efficient bio-fuel alternative-energy processes and the exploration ofnovel materials for energy usages. Finally, we use the notion of 'coarse-graining,' which is a method for averaging over less important degrees of freedom to develop computational models to predict cell function and systems-level response to disease, chemical stress, or biological pathomic agents. This project supports Energy Security, Threat Reduction, and the missions of the DOE Office of Science through its efforts to accurately model biological systems at the molecular and cellular level. The project's impact encompasses applications to biofuels, to novel sensors and to materials with broad use for energy or threat reduction. The broad, interdisciplinary approach of CNLS offers the unparalleled strength of combining science backgrounds and expertise -a unique and important asset in attacking the complex science of biological organisms. This approach also allows crossfertilization, with concepts and techniques transferring across field boundaries.

  2. Biologically Inspired Photocatalytically Active Membranes for Water Treatment

    E-Print Network [OSTI]

    Kinsinger, Nichola

    2013-01-01T23:59:59.000Z

    wastewater treatment systems include treatment of the influent by a series of stages: pretreatment, primary sedimentation, biological

  3. 6th Annual Systems Biology Symposium: Systems Biology and the Environment

    SciTech Connect (OSTI)

    Galitski, Timothy, P.

    2007-04-01T23:59:59.000Z

    Systems biology recognizes the complex multi-scale organization of biological systems, from molecules to ecosystems. The International Symposium on Systems Biology is an annual two-day event gathering the most influential researchers transforming biology into an integrative discipline investigating complex systems. In recognition of the fundamental similarity between the scientific problems addressed in environmental science and systems biology studies at the molecular, cellular, and organismal levels, the 2007 Symposium featured global leaders in “Systems Biology and the Environment.” The objective of the 2007 “Systems Biology and the Environment” International Symposium was to stimulate interdisciplinary thinking and research that spans systems biology and environmental science. This Symposium was well aligned with the DOE’s Genomics:GTL program efforts to achieve scientific objectives for each of the three DOE missions: • Develop biofuels as a major secure energy source for this century, • Develop biological solutions for intractable environmental problems, and • Understand biosystems’ climate impacts and assess sequestration strategies Our scientific program highlighted world-class research exemplifying these priorities. The Symposium featured 45 minute lectures from 12 researchers including: Penny/Sallie Chisholm of MIT gave the keynote address “Tiny Cells, Global Impact: What Prochlorococcus Can Teach Us About Systems Biology”, plus Jim Fredrickson of PNNL, Nitin Baliga of ISB, Steve Briggs of UCSD, David Cox of Perlegen Sciences, Antoine Danchin of Institut Pasteur, John Delaney of the U of Washington, John Groopman of Johns Hopkins, Ben Kerr of the U of Washington, Steve Koonin of BP, Elliott Meyerowitz of Caltech, and Ed Rubin of LBNL. The 2007 Symposium promoted DOE’s three mission areas among scientists from multiple disciplines representing academia, non-profit research institutions, and the private sector. As in all previous Symposia, we had excellent attendance of participants representing 20-30 academic or research-oriented facilities along with 25-30 private corporations from 5-10 countries. To broaden the audience for the Symposium and ensure the continued accessibility of the presentations, we made the presentation videos available afterward on the ISB’s website.

  4. College of Biology and Agriculture (801) 422-3963

    E-Print Network [OSTI]

    Hart, Gus

    College of Biology and Agriculture 301 WIDB (801) 422-3963 Internet: http://bioag.byu.edu Dean are included within the College of Biology and Agriculture: Integrative Biology (InBio) Microbiology science. Agricultural sciences address three of the great dilemmas facing mankind in the twenty

  5. Roadmap: Biology -Bachelor of Arts [AS-BA-BSCI

    E-Print Network [OSTI]

    Sheridan, Scott

    Roadmap: Biology - Bachelor of Arts [AS-BA-BSCI] College of Arts and Sciences Department of Biological Sciences Catalog Year: 2012­2013 Page 1 of 3 | Last Updated: 2-May-12/LNHD This roadmap hours and minimum 42 upper- division credit hours #12;Roadmap: Biology - Bachelor of Arts [AS

  6. Directed evolution: an evolving and enabling synthetic biology tool

    E-Print Network [OSTI]

    Zhao, Huimin

    Directed evolution: an evolving and enabling synthetic biology tool Ryan E Cobb1 , Tong Si1 remains a valuable tool for synthetic biology, enabling the identification of desired functionalities from biological entity with the intent of identifying those with desired proper- ties. While a powerful tool

  7. Conservation Practice and Policy Taking the Conservation Biology Perspective

    E-Print Network [OSTI]

    DeSalle, Rob

    to transform the topics of conservation biology research into environmental-issue and ecology topics, the major (environmental issues). Many studies published in Conservation Biology are related in some way to the ecological of their effect on the world. Keywords: conservation biology, ecology education, education, environmental

  8. PLoS Computational Biology: A New Community Journal

    E-Print Network [OSTI]

    Editorial PLoS Computational Biology: A New Community Journal Philip E. Bourne, Steven E. Brenner, Michael B. Eisen W elcome to PLoS Computation- al Biology, a community journal from the Public Li- brary of Science dedicated to reporting biological advances achieved through computation. The journal is published

  9. Applications of microfluidics in chemical biology Douglas B Weibel1

    E-Print Network [OSTI]

    Prentiss, Mara

    Applications of microfluidics in chemical biology Douglas B Weibel1 and George M Whitesides2 This review discusses the application of microfluidics in chemical biology. It aims to introduce the reader to microfluidics, describe characteristics of microfluidic systems that are useful in studying chemical biology

  10. November 2009 Peter Fratzl 1 MPG 2010+: BIOLOGICAL MATERIALS SCIENCES

    E-Print Network [OSTI]

    recognized that material properties can be critical for the biological function of molecules, tissuesNovember 2009 Peter Fratzl 1 MPG 2010+: BIOLOGICAL MATERIALS SCIENCES At a glance: A new field at the interface between biology and the materials sciences helps elucidating structure-function relations

  11. Math 574 --Optimization Models in Computational Biology (Spring 2008)

    E-Print Network [OSTI]

    Krishnamoorthy, Bala

    Bioinformatics and computational biology (BCB) is one of the "hottest" interdisciplinary areas of sci- ence todayMath 574 -- Optimization Models in Computational Biology (Spring 2008) Course Title Topics in Optimization: Models in Computational Biology Time Tue-Thu 12:00­1:15 pm Credits 3 Location Webster B12

  12. NIH WORKING DEFINITION OF BIOINFORMATICS AND COMPUTATIONAL BIOLOGY

    E-Print Network [OSTI]

    Rau, Don C.

    NIH WORKING DEFINITION OF BIOINFORMATICS AND COMPUTATIONAL BIOLOGY July 17, 2000 The following working definition of bioinformatics and computational biology were developed by the BISTIC Definition Liu Preamble Bioinformatics and computational biology are rooted in life sciences as well as computer

  13. Radiation physics, biophysics, and radiation biology

    SciTech Connect (OSTI)

    Hall, E.J.

    1992-05-01T23:59:59.000Z

    The following research programs from the Center for Radiological Research of Columbia University are described: Design and development of a new wall-less ultra miniature proportional counter for nanodosimetry; some recent measurements of ionization distributions for heavy ions at nanometer site sizes with a wall-less proportional counter; a calculation of exciton energies in periodic systems with helical symmetry: application to a hydrogen fluoride chain; electron energy-loss function in polynucleotide and the question of plasmon excitation; a non-parametric, microdosimetric-based approach to the evaluation of the biological effects of low doses of ionizing radiation; high-LET radiation risk assessment at medium doses; high-LET radiobiological effects: increased lesion severity or increased lesion proximity; photoneutrons generated by high energy medical linacs; the biological effectiveness of neutrons; implications for radiation protection; molecular characterization of oncogenes induced by neutrons; and the inverse dose-rate effect for oncogenic transformation by charged particles is LET dependent.

  14. Biology and Medicine Division annual report, 1987

    SciTech Connect (OSTI)

    Not Available

    1988-04-01T23:59:59.000Z

    Modern biology is characterized by rapid change. The development of new tools and the results derived from their application to various biological systems require significant shifts in our concepts and the strategies that are adopted to analyze and elucidate mechanisms. In parallel with exciting new scientific developments our organizational structure and programmatic emphases have altered. These changes and developments have enabled the life sciences at LBL to be better positioned to create and respond to new opportunities. The work summarized in this annual report reflects a vital multifaceted research program that is in the vanguard of the areas represented. We are committed to justifying the confidence expressed by LBL through the new mission statement and reorganizational changes designed to give greater prominence to the life sciences.

  15. 2009 Archaea: Ecology, Metabolism & Molecular Biology GRC

    SciTech Connect (OSTI)

    Dr. Julie Maupin- Furlow

    2009-07-26T23:59:59.000Z

    Archaea, one of three major evolutionary lineages of life, are a fascinating and diverse group of microbes with deep roots overlapping those of eukaryotes. The focus of the 'Archaea: Ecology Metabolism & Molecular Biology' GRC conference expands on a number of emerging topics highlighting new paradigms in archaeal metabolism, genome function and systems biology; information processing; evolution and the tree of life; the ecology and diversity of archaea and their viruses; and industrial applications. The strength of this conference lies in its ability to couple a field with a rich history in high quality research with new scientific findings in an atmosphere of stimulating exchange. This conference remains an excellent opportunity for younger scientists to interact with world experts in this field.

  16. 2011 Archaea: Ecology, Metabolism, & Molecular Biology

    SciTech Connect (OSTI)

    Keneth Stedman

    2011-08-05T23:59:59.000Z

    Archaea, one of three major evolutionary lineages of life, are a fascinating and diverse group of microbes with deep roots overlapping those of eukaryotes. The focus of the 'Archaea: Ecology Metabolism & Molecular Biology' GRC conference expands on a number of emerging topics highlighting new paradigms in archaeal metabolism, genome function and systems biology; information processing; evolution and the tree of life; the ecology and diversity of archaea and their viruses. The strength of this conference lies in its ability to couple a field with a rich history in high quality research with new scientific findings in an atmosphere of stimulating exchange. This conference remains an excellent opportunity for younger scientists to interact with world experts in this field.

  17. Radiation physics, biophysics, and radiation biology

    SciTech Connect (OSTI)

    Hall, E.J.; Zaider, M.

    1993-05-01T23:59:59.000Z

    Research at the Center for Radiological Research is a multidisciplenary blend of physics, chemistry and biology aimed at understanding the mechanisms involved in the health problems resulting from human exposure to ionizing radiations. The focus is increased on biochemistry and the application of the techniques of molecular biology to the problems of radiation biology. Research highlights of the program from the past year are described. A mathematical model describing the production of single-strand and double-strand breaks in DNA as a function radiation quality has been completed. For the first time Monte Carlo techniques have been used to obtain directly the spatial distribution of DNA moieties altered by radiation. This information was obtained by including the transport codes a realistic description of the electronic structure of DNA. We have investigated structure activity relationships for the potential oncogenicity of a new generation of bioreductive drugs that function as hypoxic cytotoxins. Experimental and theoretical investigation of the inverse dose rate effect, whereby medium LET radiations actually produce an c effect when the dose is protracted, is now at a point where the basic mechanisms are reasonably understood and the complex interplay between dose, dose rate and radiation quality which is necessary for the effect to be present can now be predicted at least in vitro. In terms of early radiobiological damage, a quantitative link has been established between basic energy deposition and locally multiply damaged sites, the radiochemical precursor of DNA double strand breaks; specifically, the spatial and energy deposition requirements necessary to form LMDs have been evaluated. For the first time, a mechanically understood biological fingerprint'' of high-LET radiation has been established. Specifically measurement of the ratio of inter-to intra-chromosomal aberrations produces a unique signature from alpha-particles or neutrons.

  18. On a Model of Superconductivity and Biology

    E-Print Network [OSTI]

    Monica De Angelis

    2012-03-02T23:59:59.000Z

    The paper deals with a semilinear integrodifferential equation that characterizes several dissipative models of Viscoelasticity, Biology and Superconductivity. The initial - boundary problem with Neumann conditions is analyzed. When the source term F is a linear function, then the explicit solution is obtained. When F is non linear, some results on existence, uniqueness and a priori estimates are deduced. As example of physical model the reaction - diffusion system of Fitzhugh Nagumo is considered.

  19. Investigation of Trace Uranium in Biological Matrices 

    E-Print Network [OSTI]

    Miller, James Christopher

    2013-05-31T23:59:59.000Z

    . This monitoring is often multi-faceted and typically involves an air sampling and biological sampling regime. The regime depends on the potential for exposures, the materials and chemical compounds being used, and the facility history. Specifically... Y-12 led the early US uranium enrichment programs, it also pioneered early uranium bioassay.[8] Likewise, the 5 Savannah River Site (SRS) pioneered plutonium bioassay techniques.[9] From these programs, techniques were developed to detect...

  20. 2004 Reversible Associations in Structure & Molecular Biology

    SciTech Connect (OSTI)

    Edward Eisenstein Nancy Ryan Gray

    2005-03-23T23:59:59.000Z

    The Gordon Research Conference (GRC) on 2004 Gordon Research Conference on Reversible Associations in Structure & Molecular Biology was held at Four Points Sheraton, CA, 1/25-30/2004. The Conference was well attended with 82 participants (attendees list attached). The attendees represented the spectrum of endeavor in this field coming from academia, industry, and government laboratories, both U.S. and foreign scientists, senior researchers, young investigators, and students.

  1. Computational Tools to Assess Turbine Biological Performance

    SciTech Connect (OSTI)

    Richmond, Marshall C.; Serkowski, John A.; Rakowski, Cynthia L.; Strickler, Brad; Weisbeck, Molly; Dotson, Curtis L.

    2014-07-24T23:59:59.000Z

    Public Utility District No. 2 of Grant County (GCPUD) operates the Priest Rapids Dam (PRD), a hydroelectric facility on the Columbia River in Washington State. The dam contains 10 Kaplan-type turbine units that are now more than 50 years old. Plans are underway to refit these aging turbines with new runners. The Columbia River at PRD is a migratory pathway for several species of juvenile and adult salmonids, so passage of fish through the dam is a major consideration when upgrading the turbines. In this paper, a method for turbine biological performance assessment (BioPA) is demonstrated. Using this method, a suite of biological performance indicators is computed based on simulated data from a CFD model of a proposed turbine design. Each performance indicator is a measure of the probability of exposure to a certain dose of an injury mechanism. Using known relationships between the dose of an injury mechanism and frequency of injury (dose–response) from laboratory or field studies, the likelihood of fish injury for a turbine design can be computed from the performance indicator. By comparing the values of the indicators from proposed designs, the engineer can identify the more-promising alternatives. We present an application of the BioPA method for baseline risk assessment calculations for the existing Kaplan turbines at PRD that will be used as the minimum biological performance that a proposed new design must achieve.

  2. KPFM and PFM of Biological Systems

    SciTech Connect (OSTI)

    Rodriguez, Brian [University College, Dublin; Kalinin, Sergei V [ORNL

    2011-01-01T23:59:59.000Z

    Surface potentials and electrostatic interactions in biological systems are a key element of cellular regulation and interaction. Examples include cardiac and muscular activity, voltage-gated ion channels, protein folding and assembly, and electroactive cells and electrotransduction. The coupling between electrical, mechanical, and chemical signals and responses in cellular systems necessitates the development of tools capable of measuring the distribution of charged species, surface potentials, and mechanical responses to applied electrical stimuli and vice versa, ultimately under physiological conditions. In this chapter, applications of voltage-modulated atomic force microscopy (AFM) methods including Kelvin probe force microscopy (KPFM) and piezoresponse force microscopy (PFM) to biological systems are discussed. KPFM is a force-sensitive non-contact or intermittent-contact mode AFM technique that allows electrostatic interactions and surface potentials to be addressed. Beyond long-range electrostatic interactions, the application of bias can lead to a mechanical response, e.g., due to linear piezoelectric coupling in polar biopolymers or via more complex electrotransduction and redox pathways in other biosystems. The use and development of PFM, based on direct electromechanical detection, to biological systems will also be addressed. The similarities and limitations of measuring surface potentials and electromechanical coupling in solution will be outlined.

  3. Biological Hydrogen Production Using Synthetic Wastewater Biotin and glutamic acid are not required for biological hydrogen production.

    E-Print Network [OSTI]

    Barthelat, Francois

    Biological Hydrogen Production Using Synthetic Wastewater Conclusion ·Biotin and glutamic acid are not required for biological hydrogen production. ·MgSO4 .7H2O is a required nutrient, but hydrogen production work should focus on minimizing the lag time in biological hydrogen production, by varying nutrient

  4. Gravitational and Space Biology 18(2) June 2005 11 WORMS IN SPACE? A MODEL BIOLOGICAL DOSIMETER

    E-Print Network [OSTI]

    Baillie, David

    is available about the biological consequences of solar flares. Biological systems are not simply passive potential for the design of a biological dosimeter. In this paper, we describe the advantages of this model about up-coming meetings, abstracts, in- house publications, researchers' contact information

  5. On the multiscale origins of fracture resistance in human bone and its biological degradation

    E-Print Network [OSTI]

    Zimmermann, Elizabeth A.

    2012-01-01T23:59:59.000Z

    and   its  biological  degradation   DISCLAIMER   This  and   its  biological  degradation   E.  A.  Zimmermanntissue  fails  due  to  degradation  of  the  collagen  

  6. Integrative multicellular biological modeling: a case study of 3D epidermal development using GPU algorithms

    E-Print Network [OSTI]

    Christley, Scott; Lee, Briana; Dai, Xing; Nie, Qing

    2010-01-01T23:59:59.000Z

    on Computational Biology and Bioinformatics 2005, 2:273-288.on Computational Biology and Bioinformatics 2005, 2:254-261.

  7. Third international congress of plant molecular biology: Molecular biology of plant growth and development

    SciTech Connect (OSTI)

    Hallick, R.B. [ed.

    1995-02-01T23:59:59.000Z

    The Congress was held October 6-11, 1991 in Tucson with approximately 3000 scientists attending and over 300 oral presentations and 1800 posters. Plant molecular biology is one of the most rapidly developing areas of the biological sciences. Recent advances in the ability to isolate genes, to study their expression, and to create transgenic plants have had a major impact on our understanding of the many fundamental plant processes. In addition, new approaches have been created to improve plants for agricultural purposes. This is a book of presentation and posters from the conference.

  8. AN INTEGRATED BIOLOGICAL CONTROL SYSTEM AT HANFORD

    SciTech Connect (OSTI)

    JOHNSON AR; CAUDILL JG; GIDDINGS RF; RODRIGUEZ JM; ROOS RC; WILDE JW

    2010-02-11T23:59:59.000Z

    In 1999 an integrated biological control system was instituted at the U.S. Department of Energy's Hanford Site. Successes and changes to the program needed to be communicated to a large and diverse mix of organizations and individuals. Efforts at communication are directed toward the following: Hanford Contractors (Liquid or Tank Waste, Solid Waste, Environmental Restoration, Science and Technology, Site Infrastructure), General Hanford Employees, and Hanford Advisory Board (Native American Tribes, Environmental Groups, Local Citizens, Washington State and Oregon State regulatory agencies). Communication was done through direct interface meetings, individual communication, where appropriate, and broadly sharing program reports. The objectives of the communication efforts was to have the program well coordinated with Hanford contractors, and to have the program understood well enough that all stakeholders would have confidence in the work performed by the program to reduce or elimated spread of radioactive contamination by biotic vectors. Communication of successes and changes to an integrated biological control system instituted in 1999 at the Department of Energy's Hanford Site have required regular interfaces with not only a diverse group of Hanford contractors (i.e., those responsible for liquid or tank waste, solid wastes, environmental restoration, science and technology, and site infrastructure), and general Hanford employees, but also with a consortium of designated stake holders organized as the Hanford Advisory Board (i.e., Native American tribes, various environmental groups, local citizens, Washington state and Oregon regulatory agencies, etc.). Direct interface meetings, individual communication where appropriate, and transparency of the biological control program were the methods and outcome of this effort.

  9. Dynamic control of catalysis within biological cells

    E-Print Network [OSTI]

    Biman Jana; Biman Bagchi

    2011-05-26T23:59:59.000Z

    We develop a theory of enzyme catalysis within biological cells where the substrate concentration [S](t) is time dependent, in contrast to the Michaelis-Menten theory that assumes a steady state. We find that the time varying concentration can combine, in a non-linear way, with the ruggedness of the free energy landscape of enzymes (discovered both in single molecule studies and in simulations) to provide a highly efficient switch (or, bifurcation) between two catalytically active states, at a critical substrate concentration. This allows a dynamic control of product synthesis in cell.

  10. X-ray holography of biological specimens

    SciTech Connect (OSTI)

    Solem, J.C.

    1984-01-01T23:59:59.000Z

    The author reviews the reasons for x-ray imaging of biological specimens and the techniques presently being used for x-ray microscopy. The author points out the advantages of x-ray holography and the difficulties of obtaining the requisite coherence with conventional sources. The author discusses the problems of radiation damage and the remarkable fact that short pulse x-ray sources circumvent these problems and obtain high-resolution images of specimens in the living state. Finally, the author reviews some of the efforts underway to develop high-intensity coherent x-ray sources for the laboratory. 14 references, 5 figures, 2 tables.

  11. Unraveling pancreatic islet biology by quantitative proteomics

    SciTech Connect (OSTI)

    Zhou, Jianying; Dann, Geoffrey P.; Liew, Chong W.; Smith, Richard D.; Kulkarni, Rohit N.; Qian, Weijun

    2011-08-01T23:59:59.000Z

    The pancreatic islets of Langerhans play a critical role in maintaining blood glucose homeostasis by secreting insulin and several other important peptide hormones. Impaired insulin secretion due to islet dysfunction is linked to the pathogenesis underlying both Type 1 and Type 2 diabetes. Over the past 5 years, emerging proteomic technologies have been applied to dissect the signaling pathways that regulate islet functions and gain an understanding of the mechanisms of islet dysfunction relevant to diabetes. Herein, we briefly review some of the recent quantitative proteomic studies involving pancreatic islets geared towards gaining a better understanding of islet biology relevant to metabolic diseases.

  12. 2007 Archaea: Ecology, Metabolism and Molecular Biology

    SciTech Connect (OSTI)

    Imke Schroeder

    2008-09-18T23:59:59.000Z

    The Archaea are a fascinating and diverse group of prokaryotic organisms with deep roots overlapping those of eukaryotes. The focus of this GRC conference, 'Archaea: Ecology Metabolism & Molecular Biology', expands on a number of emerging topics highlighting the evolution and composition of microbial communities and novel archaeal species, their impact on the environment, archaeal metabolism, and research that stems from sequence analysis of archaeal genomes. The strength of this conference lies in its ability to couple reputable areas with new scientific topics in an atmosphere of stimulating exchange. This conference remains an excellent opportunity for younger scientists to interact with world experts in this field.

  13. Biological & Environmental Research Abstracts Database

    Office of Scientific and Technical Information (OSTI)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative1 First Use of Energy for All Purposes (Fuel and Nonfuel), 2002; Level: National5Sales for4,645 3,625 1,006 492 742EnergyOn AprilAElectronic Input Options Garyand TechnicalAbout AboutWelcome to the Biological and

  14. Computational Biology | Supercomputing & Computation | ORNL

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative1 First Use of Energy for All Purposes (Fuel and Nonfuel), 2002; Level: National5Sales for4,645U.S. DOEThe Bonneville Power Administration would like submit theInnovationComputational Biology SHARE Computational

  15. SC e-journals, Biology/Genetics

    Office of Scientific and Technical Information (OSTI)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative1 First Use of Energy for All Purposes (Fuel and Nonfuel), 2002; Level: National5Sales for4,645 3,625 1,006 492 742EnergyOnItem Not Found Item Not Foundenhancer activity thanBiology/Genetics ACM Transactions on

  16. Biology and Soft Matter | Neutron Sciences | ORNL

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative1 First Use of Energy for All Purposes (Fuel and Nonfuel), 2002; Level: National5Sales for4,645U.S. DOE Office511041clothAdvanced Materials Advanced Materials Find Find More LikeAndreasHelp(SC) Biological

  17. Algal Biology Program at Los Alamos

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative1 First Use of Energy for All Purposes (Fuel and Nonfuel), 2002; Level: National5Sales for4,645U.S. DOE Office511041cloth DocumentationProducts (VAP) VAP7-0973ManagedStrategic| NationalAlexanderAlgal Biology Program

  18. Biological Hydrogen Production Workshop | Department of Energy

    Office of Energy Efficiency and Renewable Energy (EERE) Indexed Site

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative Fuels Data Center Home Page on Google Bookmark EERE: Alternative Fuels Data Center Home Page onYouTube YouTube Note: Since the YouTube platform isEnergyMeeting | DepartmentBioenergyUS DepartmentBiological

  19. BIOLOGICAL AND MICROBIAL CONTROL Potential of Entomopathogenic Nematodes for Biological Control of

    E-Print Network [OSTI]

    nematodes, biological control, cucumber BLACK PLASTIC MULCH and drip or trickle irrigation). Drip irrigation, installed simulta- neously under the plastic mulch, uses less water than conventional is concentrated around the base of the plants (Orzolek et al. 1996). Used in combination, black plastic mulch

  20. Department of Chemical and Biological Engineering Department of Chemical and Biological Engineering

    E-Print Network [OSTI]

    Heller, Barbara

    Dynamics Lab Fuel Cell Lab Fuel Cell Battery Lab Fluidization Lab Gas Processing Lab Interfacial Phenomena: Energy and Sustainability Fuel Cells Fluidization and Gasification Hybrid Systems Biological Engineering Lab Process Control & Optimization Lab Process Modeling, Monitoring and Control Lab Rheology Lab Riser

  1. Biological and Environmental Research Network Requirements

    SciTech Connect (OSTI)

    Balaji, V. [Princeton Univ., NJ (United States). Earth Science Grid Federation (ESGF); Boden, Tom [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Cowley, Dave [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Dart, Eli [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States). ESNet; Dattoria, Vince [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States). ESNet; Desai, Narayan [Argonne National Lab. (ANL), Argonne, IL (United States); Egan, Rob [Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States); Foster, Ian [Argonne National Lab. (ANL), Argonne, IL (United States); Goldstone, Robin [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Gregurick, Susan [U.S. Dept. of Energy, Washington, DC (United States). Biological Systems Science Division; Houghton, John [U.S. Dept. of Energy, Washington, DC (United States). Biological and Environmental Research (BER) Program; Izaurralde, Cesar [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Johnston, Bill [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States). ESNet; Joseph, Renu [U.S. Dept. of Energy, Washington, DC (United States). Climate and Environmental Sciences Division; Kleese-van Dam, Kerstin [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Lipton, Mary [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Monga, Inder [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States). ESNet; Pritchard, Matt [British Atmospheric Data Centre (BADC), Oxon (United Kingdom); Rotman, Lauren [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States). ESNet; Strand, Gary [National Center for Atmospheric Research (NCAR), Boulder, CO (United States); Stuart, Cory [Argonne National Lab. (ANL), Argonne, IL (United States); Tatusova, Tatiana [National Inst. of Health (NIH), Bethesda, MD (United States); Tierney, Brian [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States). ESNet; Thomas, Brian [Univ. of California, Berkeley, CA (United States); Williams, Dean N. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Zurawski, Jason [Internet2, Washington, DC (United States)

    2013-09-01T23:59:59.000Z

    The Energy Sciences Network (ESnet) is the primary provider of network connectivity for the U.S. Department of Energy (DOE) Office of Science (SC), the single largest supporter of basic research in the physical sciences in the United States. In support of SC programs, ESnet regularly updates and refreshes its understanding of the networking requirements of the instruments, facilities, scientists, and science programs that it serves. This focus has helped ESnet be a highly successful enabler of scientific discovery for over 25 years. In November 2012, ESnet and the Office of Biological and Environmental Research (BER) of the DOE SC organized a review to characterize the networking requirements of the programs funded by the BER program office. Several key findings resulted from the review. Among them: 1) The scale of data sets available to science collaborations continues to increase exponentially. This has broad impact, both on the network and on the computational and storage systems connected to the network. 2) Many science collaborations require assistance to cope with the systems and network engineering challenges inherent in managing the rapid growth in data scale. 3) Several science domains operate distributed facilities that rely on high-performance networking for success. Key examples illustrated in this report include the Earth System Grid Federation (ESGF) and the Systems Biology Knowledgebase (KBase). This report expands on these points, and addresses others as well. The report contains a findings section as well as the text of the case studies discussed at the review.

  2. Acceptance Criteria Framework for Autonomous Biological Detectors

    SciTech Connect (OSTI)

    Dzenitis, J M

    2006-12-12T23:59:59.000Z

    The purpose of this study was to examine a set of user acceptance criteria for autonomous biological detection systems for application in high-traffic, public facilities. The test case for the acceptance criteria was the Autonomous Pathogen Detection System (APDS) operating in high-traffic facilities in New York City (NYC). However, the acceptance criteria were designed to be generally applicable to other biological detection systems in other locations. For such detection systems, ''users'' will include local authorities (e.g., facility operators, public health officials, and law enforcement personnel) and national authorities [including personnel from the Department of Homeland Security (DHS), the BioWatch Program, the Centers for Disease Control and Prevention (CDC), and the Federal Bureau of Investigation (FBI)]. The panel members brought expertise from a broad range of backgrounds to complete this picture. The goals of this document are: (1) To serve as informal guidance for users in considering the benefits and costs of these systems. (2) To serve as informal guidance for developers in understanding the needs of users. In follow-up work, this framework will be used to systematically document the APDS for appropriateness and readiness for use in NYC.

  3. Functionalized apertures for the detection of chemical and biological materials

    DOE Patents [OSTI]

    Letant, Sonia E. (Livermore, CA); van Buuren, Anthony W. (Livermore, CA); Terminello, Louis J. (Danville, CA); Thelen, Michael P. (Danville, CA); Hope-Weeks, Louisa J. (Brentwood, CA); Hart, Bradley R. (Brentwood, CA)

    2010-12-14T23:59:59.000Z

    Disclosed are nanometer to micron scale functionalized apertures constructed on a substrate made of glass, carbon, semiconductors or polymeric materials that allow for the real time detection of biological materials or chemical moieties. Many apertures can exist on one substrate allowing for the simultaneous detection of numerous chemical and biological molecules. One embodiment features a macrocyclic ring attached to cross-linkers, wherein the macrocyclic ring has a biological or chemical probe extending through the aperture. Another embodiment achieves functionalization by attaching chemical or biological anchors directly to the walls of the apertures via cross-linkers.

  4. anaerobic biological reactors: Topics by E-print Network

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Peter R. 97 Department of Agricultural and Biological Engineering Fall 2011 Small Scale Anaerobic Digestion by PENERGY Solutions Materials Science Websites Summary: with less...

  5. aerobic biological treatment: Topics by E-print Network

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    L. Rezende; Kimberly A. Hammond 2003-01-01 17 Factors influencing biological treatment of MTBE contaminated ground water University of California eScholarship Repository Summary:...

  6. Biological Conversion of Sugars to Hydrocarbons Technology Pathway

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    case investigates the biological conversion of biomass-derived sugars to hydrocarbon biofuels, utilizing data from recent literature references and information consistent with...

  7. Bridging from Cells to Cognition in Autism Pathophysiology: Biological...

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    from Cells to Cognition in Autism Pathophysiology: Biological Pathways to Defective Brain Function and Plasticity. Bridging from Cells to Cognition in Autism Pathophysiology:...

  8. Hydro Review: Computational Tools to Assess Turbine Biological...

    Office of Energy Efficiency and Renewable Energy (EERE) Indexed Site

    to analyze the biological performance of proposed designs to help ensure the safety of fish passing through the turbines at the Priest Rapids Dam in Grant County, Washington....

  9. Molecular biology of signal transduction in plants. Abstracts

    SciTech Connect (OSTI)

    Not Available

    1991-12-31T23:59:59.000Z

    This volume contains abstracts of oral presentations and poster sessions of the 1991 Cold Springs Harbor Meeting entitled Molecular Biology of Signal Transduction in Plants.

  10. September 2013 Most Viewed Documents for Biology And Medicine...

    Office of Scientific and Technical Information (OSTI)

    September 2013 Most Viewed Documents for Biology And Medicine Science Subject Feed Drug Retention Times Center for Human Reliability Studies (2007) 29 > Oleoresin Capsicum...

  11. aquaculture biological agent: Topics by E-print Network

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Invertebrates Summer C, 2013 Environmental Sciences and Ecology Websites Summary: SYLLABUS Biology of Fisheries and Aquaculture Invertebrates FAS 6932 Summer C, 2013 Instructor...

  12. aquaculture overcoming biological: Topics by E-print Network

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Invertebrates Summer C, 2013 Environmental Sciences and Ecology Websites Summary: SYLLABUS Biology of Fisheries and Aquaculture Invertebrates FAS 6932 Summer C, 2013 Instructor...

  13. ancient biological invasion: Topics by E-print Network

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    who has published in the areas of invasion Davis, Mark A. 4 1 Invasion Ecology syllabus, spring 2012 Description: Mechanisms and hypotheses to explain biological invasions....

  14. Selection of bioclimatically representative biological reserve systems under climate change

    E-Print Network [OSTI]

    Pyke, C R; Fischer, Douglas T

    2005-01-01T23:59:59.000Z

    of bioclimatically representative biological reserve systemsthat are bioclimatically representative across a range ofa ?at line (i.e. a representative sample of current climate

  15. Dissecting Cell Signaling Using Synthetic Biology: New Methods...

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Dissecting Cell Signaling Using Synthetic Biology: New Methods for Engineered Control of Protein Kinases and Phosphatases Event Sponsor: Argonne Leadership Computing Facility...

  16. DOE Issues Request for Information on Biological Hydrogen Production...

    Broader source: Energy.gov (indexed) [DOE]

    (RFI) seeking feedback from interested stakeholders regarding biological hydrogen production research and development (R&D) pathways, barriers, issues, and opportunities for...

  17. adversely impacts biological: Topics by E-print Network

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    proposed Federal action evaluate the impacts of the action with respect to the human environment, including its biological, economic, and social components. This chapter addresses...

  18. Biological Conversion of Sugars to Hydrocarbons Technology Pathway...

    Broader source: Energy.gov (indexed) [DOE]

    for the pathway to become competitive with petroleum-derived gasoline-, diesel-, and jet-range hydrocarbon blendstocks. Biological Conversion of Sugars to Hydrocarbons...

  19. Structural and biological studies of bone morphogenetic protein-15

    E-Print Network [OSTI]

    McMahon, Heather Eileen

    2007-01-01T23:59:59.000Z

    homolog, GDF-9; both proteins lack the fourth of seventhe recombinant protein with this mutation lacks biologicallacks biological activity and, intriguingly, the mutant protein

  20. Genomics and Systems Biology of Tuberculosis (2009 JGI User Meeting)

    ScienceCinema (OSTI)

    Galagan, James

    2011-04-25T23:59:59.000Z

    James Galagan from the Broad Institute spoke about the "Genomics and Systems Biology of TB" on March 26, 2009 during the 4th Annual User Meeting

  1. March 2014 Most Viewed Documents for Biology And Medicine | OSTI...

    Office of Scientific and Technical Information (OSTI)

    March 2014 Most Viewed Documents for Biology And Medicine Science Subject Feed Carbon Dioxide Sequestering Using Microalgal Systems Daniel J. Stepan; Richard E. Shockey; Thomas A....

  2. Extinction cascade: Biological consequence of nuclear war/winter

    SciTech Connect (OSTI)

    Vaughan, G.L.; Pimm, S.; Fields, D.E.

    1987-01-01T23:59:59.000Z

    In very general terms, this report describes the effects on biological organisms of a nuclear war and the projected nuclear winter that would follow. (TEM)

  3. A stochastic model dissects cell states in biological transition processes

    E-Print Network [OSTI]

    Armond, Jonathan W.

    Many biological processes, including differentiation, reprogramming, and disease transformations, involve transitions of cells through distinct states. Direct, unbiased investigation of cell states and their transitions ...

  4. March 2015 Most Viewed Documents for Biology And Medicine | OSTI...

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    March 2015 Most Viewed Documents for Biology And Medicine Measuring dopamine release in the human brain with PET Volkow, N.D. Brookhaven National Lab., Upton, NY (United...

  5. Biologically engineering nanostructures to maximize energy, electron, and ion transport

    E-Print Network [OSTI]

    Park, Heechul

    2014-01-01T23:59:59.000Z

    Human intellectual desire inspires recent research to expand to interdisciplinary areas across biology, chemistry, and physics. Interdisciplinary research in unexplored areas is challenging, but holds great promise to ...

  6. Technoeconomic Boundary Analysis of Biological Pathways to Hydrogen Production

    SciTech Connect (OSTI)

    James, B. D.; Baum, G. N.; Perez, J.; Baum, K. N.

    2009-09-01T23:59:59.000Z

    Report documenting the biological and engineering characteristics of five algal and bacterial hydrogen production systems selected by DOE and NREL for evaluation.

  7. ANAEROBIC BIOLOGICAL TREATMENT OF PRODUCED WATER

    SciTech Connect (OSTI)

    John R. Gallagher

    2001-07-31T23:59:59.000Z

    During the production of oil and gas, large amounts of water are brought to the surface and must be disposed of in an environmentally sensitive manner. This is an especially difficult problem in offshore production facilities where space is a major constraint. The chief regulatory criterion for produced water is oil and grease. Most facilities have little trouble meeting this criterion using conventional oil-water separation technologies. However, some operations have significant amounts of naphthenic acids in the water that behave as oil and grease but are not well removed by conventional technologies. Aerobic biological treatment of naphthenic acids in simulated-produced water has been demonstrated by others; however, the system was easily overloaded by the large amounts of low-molecular-weight organic acids often found in produced waters. The objective of this research was to determine the ability of an anaerobic biological system to treat these organic acids in a simulated produced water and to examine the potential for biodegradation of the naphthenic acids in the anaerobic environment. A small fixed-film anaerobic biological reactor was constructed and adapted to treat a simulated produced water. The bioreactor was tubular, with a low-density porous glass packing material. The inocula to the reactor was sediment from a produced-water holding pond from a municipal anaerobic digester and two salt-loving methanogenic bacteria. During start-up, the feed to the reactor contained glucose as well as typical produced-water components. When glucose was used, rapid gas production was observed. However, when glucose was eliminated and the major organic component was acetate, little gas was generated. Methane production from acetate may have been inhibited by the high salt concentrations, by sulfide, or because of the lack, despite seeding, of microbes capable of converting acetate to methane. Toluene, a minor component of the produced water (0.1 g/L) was removed in the reactor. Batch tests were conducted to examine naphthenic acid biodegradability under several conditions. The conditions used were seed from the anaerobic reactor, wetland sediments under aerobic and anaerobic conditions, and a sterile control. The naphthenic acid was from a commercial source isolated from Gulf Coast petroleum as was dosed at 2 mg/mL. The incubations were for 30 days at 30 C. The results showed that the naphthenic acids were not biodegraded under anaerobic conditions, but were degraded under aerobic conditions. Despite poor performance of the anaerobic reactor, it remains likely that anaerobic treatment of acetate, toluene, and, potentially, other produced-water components is feasible.

  8. Overview of selected molecular biological databases

    SciTech Connect (OSTI)

    Rayl, K.D.; Gaasterland, T.

    1994-11-01T23:59:59.000Z

    This paper presents an overview of the purpose, content, and design of a subset of the currently available biological databases, with an emphasis on protein databases. Databases included in this summary are 3D-ALI, Berlin RNA databank, Blocks, DSSP, EMBL Nucleotide Database, EMP, ENZYME, FSSP, GDB, GenBank, HSSP, LiMB, PDB, PIR, PKCDD, ProSite, and SWISS-PROT. The goal is to provide a starting point for researchers who wish to take advantage of the myriad available databases. Rather than providing a complete explanation of each database, we present its content and form by explaining the details of typical entries. Pointers to more complete ``user guides`` are included, along with general information on where to search for a new database.

  9. Biology and Medicine Division annual report, 1985

    SciTech Connect (OSTI)

    Not Available

    1986-04-01T23:59:59.000Z

    This book briefly describes the activities of the Biology and Medicine Division of the Lawrence Berkeley Laboratory. During the past year the Donner Pavilion program on the treatment of arteriovenous malformations in the brain has chalked up very significant successes. The disease control rate has been high and objective measures of success using cerebral angiography have been established. The new high resolution positron emitting tomographic imager has been demonstrated to operate successfully. In the Radiation Biophysics program, the availability of higher mass ions up to uranium has allowed us cell and tissue studies in a radiation domain that is entirely new. Using uranium beams, investigators have already made new and exciting findings that are described in the body of the report.

  10. Recovery from chemical, biological, and radiological incidents :

    SciTech Connect (OSTI)

    Franco, David Oliver; Yang, Lynn I.; Hammer, Ann E.

    2012-06-01T23:59:59.000Z

    To restore regional lifeline services and economic activity as quickly as possible after a chemical, biological or radiological incident, emergency planners and managers will need to prioritize critical infrastructure across many sectors for restoration. In parallel, state and local governments will need to identify and implement measures to promote reoccupation and economy recovery in the region. This document provides guidance on predisaster planning for two of the National Disaster Recovery Framework Recovery Support Functions: Infrastructure Systems and Economic Recovery. It identifies key considerations for infrastructure restoration, outlines a process for prioritizing critical infrastructure for restoration, and identifies critical considerations for promoting regional economic recovery following a widearea disaster. Its goal is to equip members of the emergency preparedness community to systematically prioritize critical infrastructure for restoration, and to develop effective economic recovery plans in preparation for a widearea CBR disaster.

  11. 2010 Diffraction Methods in Structural Biology

    SciTech Connect (OSTI)

    Dr. Ana Gonzalez

    2011-03-10T23:59:59.000Z

    Advances in basic methodologies have played a major role in the dramatic progress in macromolecular crystallography over the past decade, both in terms of overall productivity and in the increasing complexity of the systems being successfully tackled. The 2010 Gordon Research Conference on Diffraction Methods in Structural Biology will, as in the past, focus on the most recent developments in methodology, covering all aspects of the process from crystallization to model building and refinement, complemented by examples of structural highlights and complementary methods. Extensive discussion will be encouraged and it is hoped that all attendees will participate by giving oral or poster presentations, the latter using the excellent poster display area available at Bates College. The relatively small size and informal atmosphere of the meeting provides an excellent opportunity for all participants, especially younger scientists, to meet and exchange ideas with leading methods developers.

  12. Documentation of TRU biological transport model (BIOTRAN)

    SciTech Connect (OSTI)

    Gallegos, A.F.; Garcia, B.J.; Sutton, C.M.

    1980-01-01T23:59:59.000Z

    Inclusive of Appendices, this document describes the purpose, rationale, construction, and operation of a biological transport model (BIOTRAN). This model is used to predict the flow of transuranic elements (TRU) through specified plant and animal environments using biomass as a vector. The appendices are: (A) Flows of moisture, biomass, and TRU; (B) Intermediate variables affecting flows; (C) Mnemonic equivalents (code) for variables; (D) Variable library (code); (E) BIOTRAN code (Fortran); (F) Plants simulated; (G) BIOTRAN code documentation; (H) Operating instructions for BIOTRAN code. The main text is presented with a specific format which uses a minimum of space, yet is adequate for tracking most relationships from their first appearance to their formulation in the code. Because relationships are treated individually in this manner, and rely heavily on Appendix material for understanding, it is advised that the reader familiarize himself with these materials before proceeding with the main text.

  13. Biological Systems for Hydrogen Photoproduction (Presentation)

    SciTech Connect (OSTI)

    Ghirardi, M. L.

    2012-05-01T23:59:59.000Z

    This presentation summarizes NREL biological systems for hydrogen photoproduction work for the DOE Hydrogen and Fuel Cells Program Annual Merit Review and Peer Evaluation Meeting, May 14-18, 2012. General goal is develop photobiological systems for large-scale, low cost and efficient H{sub 2} production from water (barriers AH, AI and AJ). Specific tasks are: (1) Address the O{sub 2} sensitivity of hydrogenases that prevent continuity of H{sub 2} photoproduction under aerobic, high solar-to-hydrogen (STH) light conversion efficiency conditions; and (2) Utilize a limited STH H{sub 2}-producing method (sulfur deprivation) as a platform to address or test other factors limiting commercial algal H{sub 2} photoproduction, including low rates due to biochemical and engineering mechanisms.

  14. Climatic and biological consequences of nuclear war

    SciTech Connect (OSTI)

    Grover, H.D.

    1984-05-01T23:59:59.000Z

    Projecting comprehensively the climatic and biological consequences of nuclear war brings into question the perceived security ascribed to policies of deterrence, as well as the efficacy of civil preparedness measures, particularly relocation plans. It is presumed the probability that nuclear war will occur is low, but the potential consequences are so great that the issue must be given full attention. Nuclear war is the greatest environmental threat we face. Yet the problem should be solvable. It is especially important that environmentally concerned citizens and scientists apply their knowledge and understanding to the problem because many of the changes in environmental quality that concerns us today, such as air and water pollution by a host of organic and inorganic agents, represent the principle mechanism whereby life could be threatened in the aftermath of nuclear war. 29 references.

  15. Why Are Computational Neuroscience and Systems Biology So Separate?

    E-Print Network [OSTI]

    De Schutter, Erik

    . Several examples are given, covering sociological, soft- ware technical, and methodological aspectsReview Why Are Computational Neuroscience and Systems Biology So Separate? Erik De Schutter1,2 * 1, there is surprisingly little interaction between the computational neuroscience and the systems biology research

  16. BEE 3650. Properties of Biological Materials Spring Semester 2009

    E-Print Network [OSTI]

    Walter, M.Todd

    ", in setting up the team lab project experiment and the associated specialized materials testing associatedBEE 3650. Properties of Biological Materials Spring Semester 2009 J A Bartsch, PE, 05/22/2009 Credit: 3 hours Catalogue description: Mechanics and structural properties of biological materials

  17. BEE 365. Properties of Biological Materials Spring Semester 2007

    E-Print Network [OSTI]

    Walter, M.Todd

    ", in setting up the team lab project experiment and the associated specialized materials testing associatedBEE 365. Properties of Biological Materials Spring Semester 2007 J A Bartsch, PE, 06/28/2007 Credit: 3 hours Catalogue description: Mechanics and structural properties of biological materials

  18. The Brain, the Broken Brain & the Neural Biology of Language

    E-Print Network [OSTI]

    Collar, Juan I.

    The Brain, the Broken Brain & the Neural Biology of Language Presenter: Steven Small Time & Date.maproom.com )1949 N. Hoyne Café Email list https://cfcpwork.uchicago.edu/mailman/listinfo/cafe #12;The Brain, the Broken Brain & the Neural Biology of Language Presenter: Steven Small Time & Date: 7-9 PM Monday

  19. Accessing biology's toolbox for the mesoscale biofabrication of soft matter

    E-Print Network [OSTI]

    Raghavan, Srinivasa

    Accessing biology's toolbox for the mesoscale biofabrication of soft matter Gregory F. Payne,bf James N. Culverag and William E. Bentley*ab Biology is a master of mesoscale science, possessing will provide a biocompatible approach to mesoscale science and yield products that are safe, sustainable

  20. BIOLOGICALLY MOTIVATED 3D FACE RECOGNITION Albert Ali Salah

    E-Print Network [OSTI]

    BIOLOGICALLY MOTIVATED 3D FACE RECOGNITION by Albert Ali Salah B.S, in Computer Engineering, Bogazi of Doctor of Philosophy Graduate Program in Bogazi¸ci University 2007 #12;ii BIOLOGICALLY MOTIVATED 3D FACE. Hayim Molinas. #12;iv ACKNOWLEDGEMENTS With gratitude to my PhD advisor Lale Akarun for her boundless

  1. Syllabus-PHY315-1 Biological and Medical Physics

    E-Print Network [OSTI]

    Movileanu, Liviu

    Syllabus-PHY315-1 Syllabus Biological and Medical Physics PHY 315 - Spring 2014 Professor Dr. Liviu in this syllabus. Administrative Assistance Mrs. Patricia Whitmore; Office: Room111, Physics Bldg.; Phone: 443;Syllabus-PHY315-2 Contents of the class: Why biology by the numbers? Design schemes for cells

  2. air nuclear biological: Topics by E-print Network

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    air nuclear biological First Page Previous Page 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 Next Page Last Page Topic Index 1 CHEMICAL, BIOLOGICAL AND NUCLEAR...

  3. DEPARTMENT OF BIOLOGICAL SCIENCES POLICIES AND PROCEDURES MANUAL

    E-Print Network [OSTI]

    OF THE DEPARTMENT OF BIOLOGICAL SCIENCES 1 ENVIRONMENTAL ANALYSIS 1 GOALS OF THE DEPARTMENT OF BIOLOGICAL SCIENCES 2 Information 56 Master's Degree Program 59 M.S. in Biotechnology, and a respect for, the living world through teaching and service to the public. II. ENVIRONMENTAL ANALYSIS A

  4. Gregorio Weber International Prize in Biological Fluorescence 2008

    E-Print Network [OSTI]

    Weber, David J.

    Gregorio Weber International Prize in Biological Fluorescence 2008 The Gregorio Weber International Prize in Biological Fluorescence (Weber Prize) is awarded for research related to a doctoral (or finalists. Weber Prizes were awarded in 2002 and 2005. The third Weber Prize will be awarded in 2008

  5. tchen@engr.smu.edu Parallels Between Biological

    E-Print Network [OSTI]

    Chen, Thomas M.

    Tom Chen SMU tchen@engr.smu.edu Parallels Between Biological and Computer Epidemics #12;TC/Londonmet/11-10-04 SMU Engineering p. 2 · Microscopic: How Biological and Computer Pathogens Spread/Londonmet/11-10-04 SMU Engineering p. 3 · Viruses and worms are characterized by capability for self

  6. Controlling biological systems: the lactose regulation system of Escherichia coli

    E-Print Network [OSTI]

    Pappas, George J.

    Controlling biological systems: the lactose regulation system of Escherichia coli A. Agung Julius hybrid model of the lactose regulation system of E. coli bacteria that capture important phenomena which In this paper we present a framework that consists of modeling, abstraction and control of a biological system

  7. Economics of Biological Invasion: Hound's Tongue (Cynoglossum officinale) and

    E-Print Network [OSTI]

    Economics of Biological Invasion: Hound's Tongue (Cynoglossum officinale) and Livestock Production in British Columbia by Rupananda Widanage Ph.D. (Economics), University of Ruhuna, 2007 M.Sc., Asian: Master of Resource Management Report Number: 529 Title of Research Project: Economics of Biological

  8. Safety and Health Policy and Procedure Manual Biological Safety Manual

    E-Print Network [OSTI]

    Saidak, Filip

    Biological Safety Association (ABSA) best practices as well as all federal, state, and local regulations. IISafety and Health Policy and Procedure Manual Biological Safety Manual Section 280 INDEX I. Policy space suitable for work being conducted · Under the Office of Research Compliance, establish and manage

  9. The Biological Pump in the Past D. M. Sigman

    E-Print Network [OSTI]

    Gilli, Adrian

    in the sequestration of atmospheric carbon dioxide, typically overshadowing the effects of terrestrial biospheric driven sequestration of carbon as the "biological pump." The original and strict definition of the biological (or "soft-tissue") pump is actually more specific: the sequestration of carbon dioxide

  10. ROBERT B. SHORT SCHOLARSHIP IN ZOOLOGY Department of Biological Science

    E-Print Network [OSTI]

    Ronquist, Fredrik

    The Robert B. Short Scholarship in Zoology provides an award of up to $1,000 to a currently enrolled graduateROBERT B. SHORT SCHOLARSHIP IN ZOOLOGY Department of Biological Science Florida State University of the proposed off-campus experience to the applicant's biological and career interests. ELIGIBILITY Currently

  11. FAS6932: ALGAE BIOLOGY AND ECOLOGY Instructor: Professor Edward Phlips

    E-Print Network [OSTI]

    Watson, Craig A.

    FAS6932: ALGAE BIOLOGY AND ECOLOGY Instructor: Professor Edward Phlips Main Office: Program-mail: phlips@ufl.edu Office Hours: Mondays 4pm-5pm Course Description: The biology and ecology of aquatic algae on the ecological role of algae in different aquatic ecosystems (e.g. open ocean, estuaries, coral reefs, rocky

  12. SAFE WORKING ENVIRONMENT THE DEPARTMENT OF MOLECULAR BIOLOGY AND GENETICS

    E-Print Network [OSTI]

    SAFE WORKING ENVIRONMENT THE DEPARTMENT OF MOLECULAR BIOLOGY AND GENETICS MAY 2013MAY 2013 #12;#12;SAFE WORKING ENVIRONMENT 1 The Working Environment Organisation at the Department The Working Environment organisation at the Department of Molecular Biology and Genetics (MBG) is divided into 11 working

  13. Signal processing in scanning thermoacoustic tomography in biological tissues

    E-Print Network [OSTI]

    Wang, Lihong

    Signal processing in scanning thermoacoustic tomography in biological tissues Yuan Xu and Lihong V Microwave-induced thermoacoustic tomography was explored to image biological tissues. Short microwave pulses-induced thermoacoustic waves were detected with a focused ultrasonic transducer to obtain two-dimensional tomographic

  14. Translating Data into Meaning: Education in Conservation Biology

    E-Print Network [OSTI]

    Brewer, Carol

    biologists founded the Society for Conservation Biology (SCB) in 1987 (Soul´e 1987). One of six key objectives of SCB (1987) is "the education, at all levels, preparatory and continuing, of the public in the SCB and the journal Conservation Biology since their incep- tion, and what opportunities exist

  15. Biological Development model for the Design of Robust Digital System

    E-Print Network [OSTI]

    Fernandez, Thomas

    Biological Development model for the Design of Robust Digital System Heng Liu Doctor of Philosophy and Keywords i Abstract This thesis presents a biologically-inspired developmental model for the design. The methods presented have been applied to produce a self-repairing two bit multiplier and an autonomous robot

  16. Deposition of Biological Aerosols on HVAC Heat Exchangers

    E-Print Network [OSTI]

    LBNL-47669 Deposition of Biological Aerosols on HVAC Heat Exchangers Jeffrey Siegel and Iain Walker of Biological Aerosols on HVAC Heat Exchangers Jeffrey A. Siegel Iain S. Walker, Ph.D. ASHRAE Student Member that are found in commercial and residential HVAC systems of 1 - 6 m/s (200 - 1200 ft/min), particle diameters

  17. ORIGINAL PAPER Biological nitrogen fixation by common beans

    E-Print Network [OSTI]

    Lehmann, Johannes

    ORIGINAL PAPER Biological nitrogen fixation by common beans (Phaseolus vulgaris L.) increases biological N2 fixation (BNF) by common beans (Phaseolus vulgaris L.) through bio-char additions (charcoal- tox cropped to a potentially nodulating bean variety (CIAT BAT 477) in comparison to its non

  18. A Mitochondrial Protein Compendium Elucidates Complex I Disease Biology

    E-Print Network [OSTI]

    Raines, Ronald T.

    Center for Cancer Systems Biology (CCSB) and Department of Cancer Biology, Dana-Farber Cancer Institute, infantile CI deficiency. Our results have important implications for under- standing CI function-onset neurodegeneration and is a likely contributor to cancer and type II diabetes (DiMauro and Schon, 2003; Lowell

  19. MICHELE A. JOHNSON Trinity University, Department of Biology

    E-Print Network [OSTI]

    Johnson, Michele A.

    MICHELE A. JOHNSON Trinity University, Department of Biology One Trinity Place, San Antonio, Texas 78212 michele.johnson@trinity.edu http://www.trinity.edu/mjohnso9/ EDUCATION 2001-2007 Washington Professor, Department of Biology, Trinity University, San Antonio, Texas 2007-2009 Postdoctoral Fellow

  20. ASSISTANT PROFESSOR POSITION IN BIOINFORMATICS/BIOLOGICAL DATA SCIENCE

    E-Print Network [OSTI]

    Arnold, Jonathan

    level for a tenure-track faculty position in bioinformatics or computational biology starting AugustASSISTANT PROFESSOR POSITION IN BIOINFORMATICS/BIOLOGICAL DATA SCIENCE AT THE UNIVERSITY OF GEORGIA The Institute of Bioinformatics at the University of Georgia invites applications at the Assistant Professor

  1. Molecular biology of Homo sapiens: Abstracts of papers presented at the 51st Cold Spring Harbor symposium on quantitative biology

    SciTech Connect (OSTI)

    Watson, J.D.; Siniscalco, M.

    1986-01-01T23:59:59.000Z

    This volume contains abstracts of papers presented at the 51st Cold Springs Harbor Symposium on Quantitative Biology. The topic for this meeting was the ''Molecular Biology of Homo sapiens.'' Sessions were entitled Human Gene Map, Human Cancer Genes, Genetic Diagnosis, Human Evolution, Drugs Made Off Human Genes, Receptors, and Gene Therapy. (DT)

  2. Taxonomy, Anatomy, and Biology of theTaxonomy, Anatomy, and Biology of the Hard ClamHard Clam

    E-Print Network [OSTI]

    Florida, University of

    Taxonomy, Anatomy, and Biology of theTaxonomy, Anatomy, and Biology of the Hard ClamHard Clam Shellfish Aquaculture Extension Program Cedar Key, FLy, LNST@ufl.edu #12;TaxonomyTaxonomy Kingdom: Animalia in sediment #12;Clam Taxonomy Subclass Heterodonta ­ clam-like with large hinge teeth Order Veneroidae

  3. Egyptian Journal of Biology, 2005, Vol. 7, pp 55-66 Printed in Egypt. Egyptian British Biological Society (EBB Soc)

    E-Print Network [OSTI]

    Nottingham, University of

    Egyptian Journal of Biology, 2005, Vol. 7, pp 55-66 © Printed in Egypt. Egyptian British Biological) _________________________________________________________________________________________________________________ _________________________ * Address For Correspondence Vegetation and Grazing in the St. Katherine Protectorate, South Sinai, Egypt Wallacea in Egypt 1. Operation Wallacea in Egypt & University of California, Berkeley, USA 2. School

  4. Egyptian Journal of Biology, 2005, Vol. 7, pp 66-95 Printed in Egypt. Egyptian British Biological Society (EBB Soc)

    E-Print Network [OSTI]

    Nottingham, University of

    Egyptian Journal of Biology, 2005, Vol. 7, pp 66-95 © Printed in Egypt. Egyptian British Biological, Egypt Kathy Meakin1* , Selvino R. de Kort2 , Hilary Gilbert3 , Francis Gilbert3,4 Samy Zalat3,5 , Logain Mohi, Suzan Ibrahim, John Griffin & the Volunteers of Operation Wallacea in Egypt 7 1. 31 Cliftonville

  5. Egyptian Journal of Biology, 2009, Vol. 11, pp 58-70 Printed in Egypt. Egyptian British Biological Society (EBB Soc)

    E-Print Network [OSTI]

    Shuker, David

    Egyptian Journal of Biology, 2009, Vol. 11, pp 58-70 Printed in Egypt. Egyptian British Biological. Shuker 4,5 * 1. Department of Zoology, Faculty of Science, Suez Canal University, Egypt 2. School to the insect community of herbivores on Gomphocarpus sinaicus (Boiss.) (Apocynaceae) in Sinai (Egypt

  6. Title: From data analysis to network modeling, with applications in systems biology Author: Fabian J. Theis, Computational Modeling in Biology, Institute of Bioinformatics and

    E-Print Network [OSTI]

    Gerkmann, Ralf

    J. Theis, Computational Modeling in Biology, Institute of Bioinformatics and Systems BiologyTitle: From data analysis to network modeling, with applications in systems biology Author: Fabian at detailed models of the system of interest. Our application focus are biological networks, namely gene

  7. Assistant Professor Computational Biology and Bioinformatics Job # 1401331 The University of Toronto Mississauga (UTM), Department of Biology, invites applications for a tenure-stream faculty

    E-Print Network [OSTI]

    Sokolowski, Marla

    Assistant Professor ­ Computational Biology and Bioinformatics­ Job # 1401331 The University appointment in Computational Biology and Bioinformatics at the rank of Assistant Professor effective July 1 encouraged. Applicants must have a Ph.D. in Biology or related fields (e.g. Computational Biology

  8. Computational biology: More than just a set of techniques The third Indo-French Bioinformatics meeting was held in the National Centre for Biological Sciences,

    E-Print Network [OSTI]

    Srinivasan, N.

    , such as "computational biology", "bioinformatics" and "in silico biology" are commonly used to refer to applicationsForeword Computational biology: More than just a set of techniques The third Indo-French Bioinformatics meeting was held in the National Centre for Biological Sciences, Bangalore, in June 2005

  9. UC Merced Center for Computational Biology Final Report

    SciTech Connect (OSTI)

    Colvin, Michael; Watanabe, Masakatsu

    2010-11-30T23:59:59.000Z

    Final report for the UC Merced Center for Computational Biology. The Center for Computational Biology (CCB) was established to support multidisciplinary scientific research and academic programs in computational biology at the new University of California campus in Merced. In 2003, the growing gap between biology research and education was documented in a report from the National Academy of Sciences, Bio2010 Transforming Undergraduate Education for Future Research Biologists. We believed that a new type of biological sciences undergraduate and graduate programs that emphasized biological concepts and considered biology as an information science would have a dramatic impact in enabling the transformation of biology. UC Merced as newest UC campus and the first new U.S. research university of the 21st century was ideally suited to adopt an alternate strategy - to create a new Biological Sciences majors and graduate group that incorporated the strong computational and mathematical vision articulated in the Bio2010 report. CCB aimed to leverage this strong commitment at UC Merced to develop a new educational program based on the principle of biology as a quantitative, model-driven science. Also we expected that the center would be enable the dissemination of computational biology course materials to other university and feeder institutions, and foster research projects that exemplify a mathematical and computations-based approach to the life sciences. As this report describes, the CCB has been successful in achieving these goals, and multidisciplinary computational biology is now an integral part of UC Merced undergraduate, graduate and research programs in the life sciences. The CCB began in fall 2004 with the aid of an award from U.S. Department of Energy (DOE), under its Genomes to Life program of support for the development of research and educational infrastructure in the modern biological sciences. This report to DOE describes the research and academic programs made possible by the CCB from its inception until August, 2010, at the end of the final extension. Although DOE support for the center ended in August 2010, the CCB will continue to exist and support its original objectives. The research and academic programs fostered by the CCB have led to additional extramural funding from other agencies, and we anticipate that CCB will continue to provide support for quantitative and computational biology program at UC Merced for many years to come. Since its inception in fall 2004, CCB research projects have continuously had a multi-institutional collaboration with Lawrence Livermore National Laboratory (LLNL), and the National Center for Supercomputing Applications at the University of Illinois at Urbana-Champaign, as well as individual collaborators at other sites. CCB affiliated faculty cover a broad range of computational and mathematical research including molecular modeling, cell biology, applied math, evolutional biology, bioinformatics, etc. The CCB sponsored the first distinguished speaker series at UC Merced, which had an important role is spreading the word about the computational biology emphasis at this new campus. One of CCB's original goals is to help train a new generation of biologists who bridge the gap between the computational and life sciences. To archive this goal, by summer 2006, a new program - summer undergraduate internship program, have been established under CCB to train the highly mathematical and computationally intensive Biological Science researchers. By the end of summer 2010, 44 undergraduate students had gone through this program. Out of those participants, 11 students have been admitted to graduate schools and 10 more students are interested in pursuing graduate studies in the sciences. The center is also continuing to facilitate the development and dissemination of undergraduate and graduate course materials based on the latest research in computational biology.

  10. Systems Biology Knowledgebase for a New Era in Biology A Genomics:GTL Report from the May 2008 Workshop

    SciTech Connect (OSTI)

    Gregurick, S.; Fredrickson, J. K.; Stevens, R.

    2009-03-01T23:59:59.000Z

    Biology has entered a systems-science era with the goal to establish a predictive understanding of the mechanisms of cellular function and the interactions of biological systems with their environment and with each other. Vast amounts of data on the composition, physiology, and function of complex biological systems and their natural environments are emerging from new analytical technologies. Effectively exploiting these data requires developing a new generation of capabilities for analyzing and managing the information. By revealing the core principles and processes conserved in collective genomes across all biology and by enabling insights into the interplay between an organism's genotype and its environment, systems biology will allow scientific breakthroughs in our ability to project behaviors of natural systems and to manipulate and engineer managed systems. These breakthroughs will benefit Department of Energy (DOE) missions in energy security, climate protection, and environmental remediation.

  11. Biological production of ethanol from coal

    SciTech Connect (OSTI)

    Not Available

    1992-12-01T23:59:59.000Z

    Due to the abundant supply of coal in the United States, significant research efforts have occurred over the past 15 years concerning the conversion of coal to liquid fuels. Researchers at the University of Arkansas have concentrated on a biological approach to coal liquefaction, starting with coal-derived synthesis gas as the raw material. Synthesis gas, a mixture of CO, H[sub 2], CO[sub 2], CH[sub 4] and sulfur gases, is first produced using traditional gasification techniques. The CO, CO[sub 2] and H[sub 2] are then converted to ethanol using a bacterial culture of Clostridium 1jungdahlii. Ethanol is the desired product if the resultant product stream is to be used as a liquid fuel. However, under normal operating conditions, the wild strain'' produces acetate in favor of ethanol in conjunction with growth in a 20:1 molar ratio. Research was performed to determine the conditions necessary to maximize not only the ratio of ethanol to acetate, but also to maximize the concentration of ethanol resulting in the product stream.

  12. Electromagnetic fields: Biological and clinical aspects

    SciTech Connect (OSTI)

    Tabrah, F.L.; Batkin, S. (Department of Physiology, University of Hawaii School of Medicine, Honolulu (USA))

    1991-03-01T23:59:59.000Z

    Our entire biosphere is immersed in a sea of man-made electromagnetic fields (EMF). Occupational and public health data suggest that these fields may be a health hazard, possibly involving cancer and fetal loss. This paper reviews the history and pertinent physics of electromagnetic fields and presents evidence from the authors' work, and that of others, of biological interaction with living systems. Epidemiological data suggesting EMF hazards are reviewed including a discussion of possible risks associated with Hawaii's Lualualei transmitter site, TV and FM antennas in high-density population areas, fields surrounding electric power transmission and computer terminals, and the plan to route a major highway through the near-field of an operating Omega signal-source. In the face of current public fear and controversial research reports about long-term EMF exposure, suggestions are presented for public policy about these local sources of concern, as well as for the EMF risks common to any similarly developed areas. 30 refs.

  13. Method and apparatus for biological sequence comparison

    DOE Patents [OSTI]

    Marr, T.G.; Chang, W.I.

    1997-12-23T23:59:59.000Z

    A method and apparatus are disclosed for comparing biological sequences from a known source of sequences, with a subject (query) sequence. The apparatus takes as input a set of target similarity levels (such as evolutionary distances in units of PAM), and finds all fragments of known sequences that are similar to the subject sequence at each target similarity level, and are long enough to be statistically significant. The invention device filters out fragments from the known sequences that are too short, or have a lower average similarity to the subject sequence than is required by each target similarity level. The subject sequence is then compared only to the remaining known sequences to find the best matches. The filtering member divides the subject sequence into overlapping blocks, each block being sufficiently large to contain a minimum-length alignment from a known sequence. For each block, the filter member compares the block with every possible short fragment in the known sequences and determines a best match for each comparison. The determined set of short fragment best matches for the block provide an upper threshold on alignment values. Regions of a certain length from the known sequences that have a mean alignment value upper threshold greater than a target unit score are concatenated to form a union. The current block is compared to the union and provides an indication of best local alignment with the subject sequence. 5 figs.

  14. Method and apparatus for biological sequence comparison

    DOE Patents [OSTI]

    Marr, Thomas G. (Huntington, NY); Chang, William I-Wei (Huntington, NY)

    1997-01-01T23:59:59.000Z

    A method and apparatus for comparing biological sequences from a known source of sequences, with a subject (query) sequence. The apparatus takes as input a set of target similarity levels (such as evolutionary distances in units of PAM), and finds all fragments of known sequences that are similar to the subject sequence at each target similarity level, and are long enough to be statistically significant. The invention device filters out fragments from the known sequences that are too short, or have a lower average similarity to the subject sequence than is required by each target similarity level. The subject sequence is then compared only to the remaining known sequences to find the best matches. The filtering member divides the subject sequence into overlapping blocks, each block being sufficiently large to contain a minimum-length alignment from a known sequence. For each block, the filter member compares the block with every possible short fragment in the known sequences and determines a best match for each comparison. The determined set of short fragment best matches for the block provide an upper threshold on alignment values. Regions of a certain length from the known sequences that have a mean alignment value upper threshold greater than a target unit score are concatenated to form a union. The current block is compared to the union and provides an indication of best local alignment with the subject sequence.

  15. ReseaRch at the University of Maryland Bioinformatics: Computational Analysis of Biological Information

    E-Print Network [OSTI]

    Hill, Wendell T.

    ReseaRch at the University of Maryland Bioinformatics: Computational Analysis of Biological Information Bioinformatics--the use of advanced computational techniques for biological research's Center for Bioinformatics and Computational Biology (CBCB) is at the forefront of bioinformatics research

  16. Curriculum Vitae of Paulien Hogeweg Theoretical Biology and Bioinformatics Group, Utrecht University

    E-Print Network [OSTI]

    Utrecht, Universiteit

    Curriculum Vitae of Paulien Hogeweg Theoretical Biology and Bioinformatics Group, Utrecht.g. genomic data), the dynamic modeling approaches referred to as "systems biology", "computational life sciences", "computational biology", and which partially overlaps with "complex systems research

  17. Photo-activated biological processes as quantum measurements

    E-Print Network [OSTI]

    Atac Imamoglu; K. Birgitta Whaley

    2014-08-21T23:59:59.000Z

    We outline a framework for describing photo-activated biological reactions as generalized quantum measurements of external fields, for which the biological system takes on the role of a quantum meter. By using general arguments regarding the Hamiltonian that describes the measurement interaction, we identify the cases where it is essential for a complex chemical or biological system to exhibit non-equilibrium quantum coherent dynamics in order to achieve the requisite functionality. We illustrate the analysis by considering measurement of the solar radiation field in photosynthesis and measurement of the earth's magnetic field in avian magnetoreception.

  18. High performance bioinformatics and computational biology on general-purpose graphics processing units 

    E-Print Network [OSTI]

    Ling, Cheng

    2012-06-25T23:59:59.000Z

    Bioinformatics and Computational Biology (BCB) is a relatively new multidisciplinary field which brings together many aspects of the fields of biology, computer science, statistics, and engineering. Bioinformatics ...

  19. Pulsed laser microbeams for cellular manipulation : applications in cell biology and microfluidics

    E-Print Network [OSTI]

    Hellman, Amy Noel Stacy

    2008-01-01T23:59:59.000Z

    in Cell Biology and Microfluidics A dissertation submittedin Cell Biology and Microfluidics by Amy Noel Stacy Hellmanbiochemical pathways, and microfluidics. xxiii Chapter 1 I

  20. E-Print Network 3.0 - applications molecular biology Sample Search...

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    applications molecular biology Page: << < 1 2 3 4 5 > >> 1 COMMITTEE ON GENETICS, GENOMICS & SYSTEMS BIOLOGY: SUGGESTED STUDENT TRACKS AUTUMN QUARTER WINTER QUARTER SPRING...

  1. Sage-Grouse and Wind Energy: Biology, Habits, and Potential Effects...

    Office of Energy Efficiency and Renewable Energy (EERE) Indexed Site

    Sage-Grouse and Wind Energy: Biology, Habits, and Potential Effects from Development Sage-Grouse and Wind Energy: Biology, Habits, and Potential Effects from Development...

  2. A Study on Biological Threats to Texas Freshwater Resources

    E-Print Network [OSTI]

    Neisch, Michael

    2014-01-15T23:59:59.000Z

    . The second experiment sought to determine the effectiveness of triploid grass carp, Ctenopharyngodon idella, as a biological control for two species of invasive macrophytes, which were giant salvinia, Salvinia molesta, and hygrophila, Hygrophila polysperma...

  3. Modular cell biology: retroactivity and insulation Domitilla Del Vecchio1,

    E-Print Network [OSTI]

    Sontag, Eduardo

    Modular cell biology: retroactivity and insulation Domitilla Del Vecchio1, *, Alexander J Ninfa2 a remarkable insulation property, due to the fast timescales of the phosphorylation and dephosphorylation: computational methods; metabolic and regulatory networks Keywords: feedback; insulation; modularity; singular

  4. Retroactivity, modularity, and insulation in synthetic biology circuits

    E-Print Network [OSTI]

    Lin, Allen

    2011-01-01T23:59:59.000Z

    A central concept in synthetic biology is the reuse of well-characterized modules. Modularity simplifies circuit design by allowing for the decomposition of systems into separate modules for individual construction. Complex ...

  5. Biological Effects of Electrical and Magnetic Fields: Is It Real? 

    E-Print Network [OSTI]

    Durham, M. O.

    1993-01-01T23:59:59.000Z

    this conflict. The model is a composite energy approach that identifies the classical, thermal electromagnetic interaction as well as a completely independent electric and independent magnetic component. An overview of the biological investigations is presented...

  6. A Biologically Inspired Networking Model for Wireless Sensor Networks 

    E-Print Network [OSTI]

    Charalambous, Charalambos

    2011-02-22T23:59:59.000Z

    in sensor nodes demand energy-aware network control. In this thesis, we propose an energy- efficient topology management model inspired by biological inter-cellular signaling schemes. The model allows sensor nodes to cluster around imminent targets in a...

  7. A Platform-Based Design Environment for Synthetic Biological Systems

    E-Print Network [OSTI]

    Densmore, Douglas

    in drug pro- duction, biofuels, and drug delivery vessels. In an attempt to standardize this process, and the notion of both "top down" and "bottom up" design styles. 1.1 Requirements In the world of biology one can

  8. Factors influencing biological treatment of MTBE contaminated ground water

    E-Print Network [OSTI]

    Stringfellow, William T.; Hines Jr., Robert D.; Cockrum, Dirk K.; Kilkenny, Scott T.

    2001-01-01T23:59:59.000Z

    Methyl tertiary-butyl ether (MTBE) biodegradation in batchCometabolic degradation of MTBE by a cyclohexane-oxidizingof 49 Biological Treatment of MTBE Fortin, N. Y. , and M. A.

  9. Biological Stoichiometry in Human Cancer James J. Elser1

    E-Print Network [OSTI]

    Elser, Jim

    of the balance of energy and multiple chemical elements in ecological interactions [5]. More recently Center, Kansas City, Kansas, United States of America, 3 Department of Biology, Scottsdale Community

  10. Making biosecurity, making Mexico : an ethnography of biological invasion

    E-Print Network [OSTI]

    Wanderer, Emily Mannix

    2014-01-01T23:59:59.000Z

    This dissertation tracks what happens when biology, that is, both life forms and knowledge about them, becomes the object of security. While increasing global traffic has led to a greater degree of movement of people, ...

  11. Chemistry & Biology Genome-Wide High-Throughput Mining

    E-Print Network [OSTI]

    Yin, Jun

    Chemistry & Biology Article Genome-Wide High-Throughput Mining of Natural-Product Biosynthetic Gene.01.006 SUMMARY We have developed a phage-display method for high-throughput mining of bacterial gene clus- ters

  12. CEC-500-2010-FS-016 Cumulative Biological Impacts

    E-Print Network [OSTI]

    for Solar Energy Projects in the California Desert ENVIRONMENTAL AREA RESEARCH PIER Environmental ResearchCEC-500-2010-FS-016 Cumulative Biological Impacts Framework for Solar Energy Projects in the California Desert ENVIRONMENTAL AREA RESEARCH PIER Environmental Research www

  13. Greta Smith Aeby Hawaii Institute of Marine Biology

    E-Print Network [OSTI]

    Wang, Yuqing

    Greta Smith Aeby Hawaii Institute of Marine Biology PO Box 1346 Kaneohe, HI 96744 Work, TM, Forsman, Rogers, A, Sanciangco, J, Sheppard, A, Sheppard, C, Smith, J, Stuart, S, Turak, E, Veron, J, Wallace, C

  14. BSCI 338V Biology of Vision Spring 2010

    E-Print Network [OSTI]

    Carleton, Karen L.

    of perspectives and will include topics from physics, molecular biology, sensory ecology, evolution, development TH Apr 22 23. Color perception and visual cortex Jacobs et al 2007 T Apr 27 24. Object recognition TH

  15. Methods of increasing secretion of polypeptides having biological activity

    DOE Patents [OSTI]

    Merino, Sandra

    2014-05-27T23:59:59.000Z

    The present invention relates to methods for producing a secreted polypeptide having biological activity, comprising: (a) transforming a fungal host cell with a fusion protein construct encoding a fusion protein, which comprises: (i) a first polynucleotide encoding a signal peptide; (ii) a second polynucleotide encoding at least a catalytic domain of an endoglucanase or a portion thereof; and (iii) a third polynucleotide encoding at least a catalytic domain of a polypeptide having biological activity; wherein the signal peptide and at least the catalytic domain of the endoglucanase increases secretion of the polypeptide having biological activity compared to the absence of at least the catalytic domain of the endoglucanase; (b) cultivating the transformed fungal host cell under conditions suitable for production of the fusion protein; and (c) recovering the fusion protein, a component thereof, or a combination thereof, having biological activity, from the cultivation medium.

  16. Methods of increasing secretion of polypeptides having biological activity

    DOE Patents [OSTI]

    Merino, Sandra

    2014-10-28T23:59:59.000Z

    The present invention relates to methods for producing a secreted polypeptide having biological activity, comprising: (a) transforming a fungal host cell with a fusion protein construct encoding a fusion protein, which comprises: (i) a first polynucleotide encoding a signal peptide; (ii) a second polynucleotide encoding at least a catalytic domain of an endoglucanase or a portion thereof; and (iii) a third polynucleotide encoding at least a catalytic domain of a polypeptide having biological activity; wherein the signal peptide and at least the catalytic domain of the endoglucanase increases secretion of the polypeptide having biological activity compared to the absence of at least the catalytic domain of the endoglucanase; (b) cultivating the transformed fungal host cell under conditions suitable for production of the fusion protein; and (c) recovering the fusion protein, a component thereof, or a combination thereof, having biological activity, from the cultivation medium.

  17. 7.02 Introduction to Experimental Biology, Fall 2001

    E-Print Network [OSTI]

    Amon, Angelika

    7.02 and 7.021 require simultaneous registration. Application of experimental techniques in biochemistry, microbiology, and cell biology. Emphasizes integrating factual knowledge with understanding the design of experiments ...

  18. Biological Cluster Validity Indices Based on the Gene Ontology

    E-Print Network [OSTI]

    Zell, Andreas

    Biological Cluster Validity Indices Based on the Gene Ontology Nora Speer, Christian Spieth 3646, pp. 429­439, 2005. c Springer-Verlag Berlin Heidelberg 2005 #12;430 N. Speer, C. Spieth, and A

  19. Midwest Quantitative Biology Conference Mission Point Resort, Mackinac Island, Michigan

    E-Print Network [OSTI]

    Midwest Quantitative Biology Conference Mission Point Resort, Mackinac Island, Michigan September Exchange Method for the Free Energy of Conformational Fluctuations Michigan State University 3:05-3:30 Role

  20. UNIVERSITY OF CALIFORNIA, SANTA CRUZ MOLECULAR, CELL, & DEVELOPMENTAL BIOLOGY

    E-Print Network [OSTI]

    California at Santa Cruz, University of

    UNIVERSITY OF CALIFORNIA, SANTA CRUZ MOLECULAR, CELL, & DEVELOPMENTAL BIOLOGY Junior Specialist I ­ Assistant Specialist II The University of California, Santa Cruz (UCSC) invites applications will be conducted. Reappointment is also contingent upon availability of funding. TO APPLY: Applications

  1. 8.592 Statistical Physics in Biology, Spring 2003

    E-Print Network [OSTI]

    Kardar, Mehran

    A survey of problems at the interface of statistical physics and modern biology: Bioinformatic methods for extracting information content of DNA; gene finding, sequence comparison, phylogenetic trees. Physical interactions ...

  2. Journal of Mathematical Biology ISSN 0303-6812

    E-Print Network [OSTI]

    Lewis, Mark

    . The approach of Speirs and Gurney (2001) employs classical mathematical methods of population spread differently, to determine population persistence or extinction. The theoretical frame- work and methods Departments of Mathematical and Statistical Sciences and of Biological Sciences, University of Alberta

  3. Interfacial Interactions between Implant Electrode and Biological Environment

    E-Print Network [OSTI]

    Chiu, Cheng-Wei 1979-

    2012-11-06T23:59:59.000Z

    at establishing the fundamental knowledge of interfacial interactions between the host biological environment and an implanted electrode. We will identify the dynamic mechanisms of such interfacial interactions. Quantitative analysis of the electrical properties...

  4. BE.440 Analysis of Biological Networks, Fall 2004

    E-Print Network [OSTI]

    Essigmann, John

    This class analyzes complex biological processes from the molecular, cellular, extracellular, and organ levels of hierarchy. Emphasis is placed on the basic biochemical and biophysical principles that govern these processes. ...

  5. Scalable computational architecture for integrating biological pathway models

    E-Print Network [OSTI]

    Shiva, V. A

    2007-01-01T23:59:59.000Z

    A grand challenge of systems biology is to model the cell. The cell is an integrated network of cellular functions. Each cellular function, such as immune response, cell division, metabolism or apoptosis, is defined by an ...

  6. FAS4932: ALGAE BIOLOGY AND ECOLOGY Instructor: Professor Edward Phlips

    E-Print Network [OSTI]

    Watson, Craig A.

    FAS4932: ALGAE BIOLOGY AND ECOLOGY Instructor: Professor Edward Phlips Main Office: Program algae, including evolution, classification, structure, photosynthesis, growth, and reproduction. Emphasis on the ecological role of algae in different aquatic ecosystems (e.g. open ocean, estuaries, coral

  7. Speciation of Uranium in Biologically Reduced Sediments in the...

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Speciation of Uranium in Biologically Reduced Sediments in the Old Rifle Aquifer Wednesday, May 16, 2012 - 1:30pm SSRL Conference Room 137-322 Juan S. Lezama Pacheco The speciation...

  8. The common ground of genomics and systems biology

    E-Print Network [OSTI]

    Conesa, Ana; Mortazavi, Ali

    2014-01-01T23:59:59.000Z

    8/S2. Authors’ details Genomics of Gene Expression Lab,systems biology. Annu Rev. Genomics Hum. Genet 2001, 2:343-projection strategies. Genomics 2008, 92(6):373-83. 31.

  9. DARLENE R. KETTEN Biology Department Department of Otology & Laryngology

    E-Print Network [OSTI]

    University 1985-1987 Post-doctoral Fellow Eaton-Peabody Laboratory of Auditory Physiology Harvard Medical, Individual Expert in Bioacoustics (ASAIE) 2012 Member of the Corporation of the Marine Biological Laboratory

  10. The physical, environmental, and evolutionary determinants of biological architecture

    E-Print Network [OSTI]

    Kempes, Christopher Andrew Poling

    2013-01-01T23:59:59.000Z

    The relationship between structure and function is a longstanding and central topic in biology, evolution, and ecology. The importance of morphology is clearly visible in the diverse forms taken by innumerable organisms ...

  11. Phenomenological models in biological physics : cell growth and pluripotency maintenance

    E-Print Network [OSTI]

    Youk, Hyun

    2010-01-01T23:59:59.000Z

    A persistent challenge in quantitatively modeling a biological system is that the system often involves many components and just as dizzying number of interactions among those components. To further complicate matters, the ...

  12. annual hanford biology: Topics by E-print Network

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    Meeting Biology and Medicine Websites Summary: , B.A., Rodriguez, M. ., Weller, S.G.; UC Irvine 3:30 PM Natural Concluding remarks, Rose, M.R.; UC Irvine 6:15 PM Directors'...

  13. Investigations of biological processes in Austrian MBT plants

    SciTech Connect (OSTI)

    Tintner, J. [Institute of Waste Management, Department of Water, Atmosphere and Environment, University of Natural Resources and Applied Life Sciences, Muthgasse 107, 1190 Vienna (Austria); Smidt, E., E-mail: ena.smidt@boku.ac.a [Institute of Waste Management, Department of Water, Atmosphere and Environment, University of Natural Resources and Applied Life Sciences, Muthgasse 107, 1190 Vienna (Austria); Boehm, K.; Binner, E. [Institute of Waste Management, Department of Water, Atmosphere and Environment, University of Natural Resources and Applied Life Sciences, Muthgasse 107, 1190 Vienna (Austria)

    2010-10-15T23:59:59.000Z

    Mechanical biological treatment (MBT) of municipal solid waste (MSW) has become an important technology in waste management during the last decade. The paper compiles investigations of mechanical biological processes in Austrian MBT plants. Samples from all plants representing different stages of degradation were included in this study. The range of the relevant parameters characterizing the materials and their behavior, e.g. total organic carbon, total nitrogen, respiration activity and gas generation sum, was determined. The evolution of total carbon and nitrogen containing compounds was compared and related to process operation. The respiration activity decreases in most of the plants by about 90% of the initial values whereas the ammonium release is still ongoing at the end of the biological treatment. If the biogenic waste fraction is not separated, it favors humification in MBT materials that is not observed to such extent in MSW. The amount of organic carbon is about 15% dry matter at the end of the biological treatment.

  14. Coupling Groundwater Modeling with Biology to Identify Strategic Water Resources

    E-Print Network [OSTI]

    Paris-Sud XI, Université de

    Coupling Groundwater Modeling with Biology to Identify Strategic Water Resources Didier Graillot 1 ABSTRACT The identification of hydraulic interactions between rivers and groundwater is part and parcel hinders groundwater modeling everywhere and simulating water management scenarios in every place

  15. Phenanthropiperidine Alkaloids: Methodology Development, Synthesis and Biological Evaluation

    E-Print Network [OSTI]

    Niphakis, Micah James

    2010-04-08T23:59:59.000Z

    This work is directed towards the development of safe phenanthropiperidines for the treatment of cancer. It focuses on synthetic methodologies that facilitate their preparation and biological studies to better understand ...

  16. Computational modeling of biological molecule separation in nanofluidic devices

    E-Print Network [OSTI]

    Fayad, Ghassan Najib, 1982-

    2010-01-01T23:59:59.000Z

    Separation of biological molecules such as DNA and protein is of great importance for the chemical and pharmaceutical industries. In recent years, several researchers focused on fabricating patterned regular sieving ...

  17. Methods of increasing secretion of polypeptides having biological activity

    DOE Patents [OSTI]

    Merino, Sandra

    2013-10-01T23:59:59.000Z

    The present invention relates to methods for producing a secreted polypeptide having biological activity, comprising: (a) transforming a fungal host cell with a fusion protein construct encoding a fusion protein, which comprises: (i) a first polynucleotide encoding a signal peptide; (ii) a second polynucleotide encoding at least a catalytic domain of an endoglucanase or a portion thereof; and (iii) a third polynucleotide encoding at least a catalytic domain of a polypeptide having biological activity; wherein the signal peptide and at least the catalytic domain of the endoglucanase increases secretion of the polypeptide having biological activity compared to the absence of at least the catalytic domain of the endoglucanase; (b) cultivating the transformed fungal host cell under conditions suitable for production of the fusion protein; and (c) recovering the fusion protein, a component thereof, or a combination thereof, having biological activity, from the cultivation medium.

  18. Arms Control: US and International efforts to ban biological weapons

    SciTech Connect (OSTI)

    Not Available

    1992-12-01T23:59:59.000Z

    The Bacteriological (Biological) and Toxin Weapons Convention, the treaty that bans the development, production, and stockpiling and acquisition of biological weapons was opened for signature in 1972 and came into force in 1975 after being ratified by 22 governments, including the depository nations of the USA, the United Kingdom, and the former Soviet Union. In support of the Convention, the USA later established export controls on items used to make biological weapons. Further, in accordance with the 1990 President`s Enhanced Proliferation Control Initiative, actions were taken to redefine and expand US export controls, as well as to encourage multilateral controls through the Australia Group. Thus far, the Convention has not been effective in stopping the development of biological weapons. The principal findings as to the reasons of the failures of the Convention are found to be: the Convention lacks universality, compliance measures are effective, advantage of verification may outweigh disadvantages. Recommendations for mitigating these failures are outlined in this report.

  19. Large, noisy, and incomplete : mathematics for modern biology

    E-Print Network [OSTI]

    Baym, Michael Hartmann

    2009-01-01T23:59:59.000Z

    In recent years there has been a great deal of new activity at the interface of biology and computation. This has largely been driven by the massive in flux of data from new experimental technologies, particularly ...

  20. Phosphorescent semiconductor nanocrystals and proteins for biological oxygen sensing

    E-Print Network [OSTI]

    McLaurin, Emily J. (Emily Jane)

    2011-01-01T23:59:59.000Z

    Oxygen is required for cellular respiration by all complex life making it a key metabolic profiling factor in biological systems. Tumors are defined by hypoxia (low pO2), which has been shown to influence response to ...

  1. lstols@anl.gov Loyola University BS 1978 Biology

    E-Print Network [OSTI]

    Kemner, Ken

    Lucy Stols lstols@anl.gov . Education Loyola University BS 1978 Biology Chicago, IL Roosevelt determination. J Struc Funct Genomics 11, 31-39. Structural Genomics Consortium; China Structural Genomics

  2. CENTER FOR ENVIRONMENTAL MEDICINE, ASTHMA AND LUNG BIOLOGY PUBLICATIONS (2008)

    E-Print Network [OSTI]

    Crews, Stephen

    2008-01-01T23:59:59.000Z

    CENTER FOR ENVIRONMENTAL MEDICINE, ASTHMA AND LUNG BIOLOGY PUBLICATIONS (2008) Alexis NE, Muhlebach MS, Peden DB, Noah TL. Attenuation of host defense function of lung phagocytes in early cystic

  3. Environmental Studies Paul A. Harcombe (Ecology and Evolutionary Biology)

    E-Print Network [OSTI]

    Richards-Kortum, Rebecca

    , environmental engineering (see Civil and Environmental Engi- neering), or environmental policy (see Policy178 Environmental Studies Directors Paul A. Harcombe (Ecology and Evolutionary Biology) Walter W) The Environmental Studies Program offers several introductory couses for students interested in broadening

  4. Probabilistic Approaches in Comparative Analysis of Biological Networks and Sequences

    E-Print Network [OSTI]

    Sahraeian, Sayed 1983-

    2013-01-07T23:59:59.000Z

    PROBABILISTIC APPROACHES IN COMPARATIVE ANALYSIS OF BIOLOGICAL NETWORKS AND SEQUENCES A Dissertation by SAYED MOHAMMAD EBRAHIM SAHRAEIAN Submitted to the O ce of Graduate Studies of Texas A&M University in partial ful llment...: Electrical Engineering Copyright 2013 Sayed Mohammad Ebrahim Sahraeian ABSTRACT Comparative analysis of genomic data investigates the relationship of genome structure and function across di erent biological species to shed light on their sim- ilarities...

  5. Bringing Standards to Life: Synthetic Biology Standards and Intellectual Property

    E-Print Network [OSTI]

    Torrance, Andrew W.; Kahl, Linda

    2014-01-01T23:59:59.000Z

    ); Joachim Henckel & Stephen M. Maurer, The Economics of Synthetic Biology, MOL. SYST. BIOL., June 5, 2007, available at http://www.nature.com/msb/journal/v3/n1/full/msb4100161.html; David Cohn, Open-Source Biology Evolves, WIRED (Jan. 17, 2005), http... different genetic contexts.55 Other tools that help rationally Linton et al., Translocation of Green F luorescent Protein by Comparative Analysis with Multiple Signal Peptides, 7 BIOTECHNOL. J. 667 (2012); Raul Cuero, J. Lilly & David S. Mc...

  6. Guidelines to improve airport preparedness against chemical and biological terrorism.

    SciTech Connect (OSTI)

    Edwards, Donna M.; Price, Phillip N. (Lawrence Berkeley National Laboratory, Berkeley, CA); Gordon, Susanna P.; Gadgil, Ashok (Lawrence Berkeley National Laboratory, Berkeley, CA)

    2005-05-01T23:59:59.000Z

    Guidelines to Improve Airport Preparedness Against Chemical and Biological Terrorism is a 100-page document that makes concrete recommendations on improving security and assessing vulnerable areas and helps its readers understand the nature of chemical and biological attacks. The report has been turned over to Airports Council International (ACI) and the American Association of Airport Executives (AAAE), two organizations that together represent the interests of thousands of airport personnel and facilities in the U.S. and around the world.

  7. Probabilistic retrieval and visualization of biologically relevant microarray experiments

    E-Print Network [OSTI]

    2009-10-19T23:59:59.000Z

    International Society for Computational Biology (ISCB) Student Council Symposium Stockholm, Sweden 27 June 2009 Published: 19 October 2009 BMC Bioinformatics 2009, 10(Suppl 13):P1 doi: 10.1186/1471-2105-10-S13-P1 This article is available from: http... BMC Bioinformatics Poster presentation Probabilistic retrieval and visualization of biologically relevant microarray experiments José Caldas*1, Nils Gehlenborg2,3, Ali Faisal1, Alvis Brazma2 and Samuel Kaski1 Address: 1Helsinki Institute...

  8. Behavior of nanoceria in biologically-relevant environments

    SciTech Connect (OSTI)

    Kumar, Amit; Das, Soumen; Munusamy, Prabhakaran; Self, William; Baer, Donald R.; Sayle, Dean C.; Seal, Sudipta

    2014-09-08T23:59:59.000Z

    Cerium oxide nanoparticles (CNPs) have gained a considerable attention in biological research due to their anti-oxidant like behaviour and regenerative nature. The current literature on CNPs reports many successful attempts on harnessing the beneficial therapeutic properties in biology. However studies have also shown toxicity effect with some types of CNPs. This review discusses issues associated with the behaviours of CNPs in biological systems and identifies key knowledge gaps. We explore how salient physicochemical properties (size, surface chemistry, surface stabilizers) contribute to the potential positive and negative aspects of nanoceria in biological systems. Based on variations of results reported in the literature, important issues need to be addressed. Are we really studying the same particles with slight variations in size and physicochemical properties or do the particles being examined have fundamentally different behaviours? Are the variations observed in the result of differences in the initial properties of the particles or the results of downstream effects that emerge as the particles are prepared for specific studies and they interact with biological or other environmental moieties? How should particles be appropriately prepared for relevant environmental/toxicology/safety studies? It is useful to recognize that nanoparticles encompass some of the same complexities and variability associated with biological components

  9. The conclusion of a biologic's lifecycle : manufacturing sourcing strategies on the eve of follow-on biologics

    E-Print Network [OSTI]

    Pasanek, David M

    2008-01-01T23:59:59.000Z

    The Amgen Rhode Island facility is dedicated to the production of the biological bulk drug substance (BDS) for Enbrel® (etanercept), which blocks the action of one's immune system, helping to treat immune diseases, such ...

  10. Journal of Steroid Biochemistry & Molecular Biology 94 (2005) 273277 11 -Hydroxysteroid dehydrogenase in the heart of

    E-Print Network [OSTI]

    Miksik, Ivan

    2005-01-01T23:59:59.000Z

    Symposium of the Journal of Steriod Biochemistry and Molecular Biology on Recent Advances in Steroid

  11. Max-Planck-Institut fr biologische Kybernetik Max Planck Institute for Biological Cybernetics

    E-Print Network [OSTI]

    Engineering (Aeronautics) The Max Planck Institute for Biological Cybernetics in Tübingen, Germany launches

  12. A Vital Legacy - Biological and Environmental Research in the Atomic Age

    E-Print Network [OSTI]

    Vaughan editor, Douglas

    2010-01-01T23:59:59.000Z

    health physics works and industrial hygiene activ- ities."health physics, industrial hygiene, and radiation biology.

  13. Computers are from Mars, Organisms are from Venus: Interrelationship guide to Biology and Computer Science

    E-Print Network [OSTI]

    Kim, Junhyong

    . In recent years one active area of interdisciplinary merger has been biology and computer science. The noise youthful sciences? There is a kind of a natural affinity between biology and computer science. E is to "get over the mythical idea of an expert." Biology meets Computer Science: Computational Biology

  14. Biological Nitrogen Fixation in Two Tropical Forests: Ecosystem-Level Patterns and Effects of Nitrogen Fertilization

    E-Print Network [OSTI]

    Cusack, Daniela F.; Silver, Whendee; McDowell, William H.

    2009-01-01T23:59:59.000Z

    was kept in open plastic containers and maintained nearconditions in open plastic containers Biological Nitrogen

  15. Biological optimization systems for enhancing photosynthetic efficiency and methods of use

    DOE Patents [OSTI]

    Hunt, Ryan W; Chinnasamy, Senthil; Das, Keshav C; Rolim de Mattos, Erico

    2014-02-25T23:59:59.000Z

    The present disclosure relates to biological optimization systems for enhancing photosynthetic efficiency and methods of use.

  16. Request for Travel Funds for Systems Radiation Biology Workshop

    SciTech Connect (OSTI)

    Barcellos-Hoff, Mary Helen [NYU School of Medicine

    2014-03-22T23:59:59.000Z

    The 3rd International Systems Radiation Biology Workshop brought together the major European, US and Japanese research programs on radiation risk as well as selected experts representing systems biological approaches to discuss how the new methodologies could be best exploited for low dose research. A significant part of the workshop was devoted to discussions organised as breakout group sessions. To facilitate discussions number of participants was limited to 60 persons. To achieve the goals of this symposium in this international conference, support from DOE is vital. Hence, this proposal requested support in the amount of $15,000 to cover the travel expenses of international experts and radiation biology scientists from the United States. This supporting mechanism was clearly identified to the selected US participants as a conference support award from the DOE (See attached PDF). The workshop was an outstanding opportunity to strengthen interactions between leading experts in the emerging areas of radiation sciences, and will also provide opportunities for younger scientists to meet with experts and discuss their results. This workshop was designed to endorse active engagement in international collaboration. A major objective of this conference was to effectively communicate research results, in order to ensure that current thinking reflects sound science of radiation biology. Further, this international event addressed the use and success of scientific initiatives in radiation biology for policymakers, standard-setters, and the general public.

  17. Solid-water detoxifying reagents for chemical and biological agents

    DOE Patents [OSTI]

    Hoffman, Dennis M. (Livermore, CA); Chiu, Ing Lap (Castro Valley, CA)

    2006-04-18T23:59:59.000Z

    Formation of solid-water detoxifying reagents for chemical and biological agents. Solutions of detoxifying reagent for chemical and biological agents are coated using small quantities of hydrophobic nanoparticles by vigorous agitation or by aerosolization of the solution in the presence of the hydrophobic nanoparticles to form a solid powder. For example, when hydrophobic fumed silica particles are shaken in the presence of IN oxone solution in approximately a 95:5-weight ratio, a dry powder results. The hydrophobic silica forms a porous coating of insoluble fine particles around the solution. Since the chemical or biological agent tends to be hydrophobic on contact with the weakly encapsulated detoxifying solution, the porous coating breaks down and the detoxifying reagent is delivered directly to the chemical or biological agent for maximum concentration at the point of need. The solid-water (coated) detoxifying solutions can be blown into contaminated ventilation ducting or other difficult to reach sites for detoxification of pools of chemical or biological agent. Once the agent has been detoxified, it can be removed by flushing the area with air or other techniques.

  18. Method and apparatus for determining nutrient stimulation of biological processes

    DOE Patents [OSTI]

    Colwell, F.S.; Geesey, G.G.; Gillis, R.J.; Lehman, R.M.

    1997-11-11T23:59:59.000Z

    A method and apparatus is described for determining the nutrients to stimulate microorganisms in a particular environment. A representative sample of microorganisms from a particular environment are contacted with multiple support means wherein each support means has intimately associated with the surface of the support means a different nutrient composition for said microorganisms in said sample. The multiple support means is allowed to remain in contact with the microorganisms in the sample for a time period sufficient to measure differences in microorganism effects for the multiple support means. Microorganism effects for the multiple support means are then measured and compared. The invention is particularly adaptable to being conducted in situ. The additional steps of regulating nutrients added to the particular environment of microorganisms can enhance the desired results. Biological systems particularly suitable for this invention are bioremediation, biologically enhanced oil recovery, biological leaching of metals, and agricultural bioprocesses. 5 figs.

  19. Formulations for neutralization of chemical and biological toxants

    DOE Patents [OSTI]

    Tadros, Maher E.; Tucker, Mark D.

    2003-05-20T23:59:59.000Z

    A formulation and method of making that neutralizes the adverse health effects of both chemical and biological compounds, especially chemical warfare (CW) and biological warfare (BW) agents. The formulation of the present invention non-toxic and non-corrosive and can be delivered by a variety of means and in different phases. The formulation provides solubilizing compounds that serve to effectively render the chemical and biological compounds, particularly CW and BW compounds, susceptible to attack and at least one reactive compound that serves to attack (and detoxify or kill) the compound. The at least one reactive compound can be an oxidizing compound, a nucleophilic compound or a mixture of both. The formulation can kill up to 99.99999% of bacterial spores within one hour of exposure.

  20. Method and apparatus for determining nutrient stimulation of biological processes

    DOE Patents [OSTI]

    Colwell, F.S.; Geesey, G.G.; Gillis, R.J.; Lehman, R.M.

    1999-07-13T23:59:59.000Z

    A method and apparatus are disclosed for determining the nutrients to stimulate microorganisms in a particular environment. A representative sample of microorganisms from a particular environment are contacted with multiple support means wherein each support means has intimately associated with the surface of the support means a different nutrient composition for microorganisms in the sample. The multiple support means is allowed to remain in contact with the microorganisms in the sample for a time period sufficient to measure difference in microorganism effects for the multiple support means. Microorganism effects for the multiple support means are then measured and compared. The invention is particularly adaptable to being conducted in situ. The additional steps of regulating nutrients added to the particular environment of microorganisms can enhance the desired results. Biological systems particularly suitable for this invention are bioremediation, biologically enhanced oil recovery, biological leaching of metals, and agricultural bioprocesses. 5 figs.

  1. Enhanced formulations for neutralization of chemical, biological and industrial toxants

    DOE Patents [OSTI]

    Tucker, Mark D. (Albuqueque, NM) [Albuqueque, NM

    2008-06-24T23:59:59.000Z

    An enhanced formulation and method of making that neutralizes the adverse health effects of both chemical and biological compounds, especially chemical warfare (CW) and biological warfare (BW) agents, and toxic industrial chemicals. The enhanced formulation according to the present invention is non-toxic and non-corrosive and can be delivered by a variety of means and in different phases. The formulation provides solubilizing compounds that serve to effectively render the chemical and biological compounds, particularly CW and BW compounds, susceptible to attack, and at least one reactive compound that serves to attack (and detoxify or kill) the compound. The formulation includes at least one solubilizing agent, a reactive compound, a bleaching activator and water.

  2. Renewable Energy from Synthetic Biology (LBNL Science at the Theater)

    ScienceCinema (OSTI)

    Keasling, Jay

    2011-04-28T23:59:59.000Z

    Jay Keasling, co-leader of Berkeley Lab's Helios Project, is a groundbreaking researcher in the new scientific field of synthetic biology. In Helios, he directs the biology program, incorporating a range of approaches to increasing the efficacy and economy of plants and cellulose-degrading microbes to make solar-based fuels. He is a UC Berkeley professor of Chemical and Bioengineering, and founder of Amyris Biotechnologies, a company that was honored as a Technology Pioneer for 2006 by the World Economic Forum. Keasling has succeeded in using synthetic biology to develop a yeast-based production scheme for precursors of the antimalarial drug artemisinin in work funded by the Bill & Melinda Gates Foundation.

  3. Chemical and biological nonproliferation program. FY99 annual report

    SciTech Connect (OSTI)

    NONE

    2000-03-01T23:59:59.000Z

    This document is the first of what will become an annual report documenting the progress made by the Chemical and Biological Nonproliferation Program (CBNP). It is intended to be a summary of the program's activities that will be of interest to both policy and technical audiences. This report and the annual CBNP Summer Review Meeting are important vehicles for communication with the broader chemical and biological defense and nonproliferation communities. The Chemical and Biological Nonproliferation Program Strategic Plan is also available and provides additional detail on the program's context and goals. The body of the report consists of an overview of the program's philosophy, goals and recent progress in the major program areas. In addition, an appendix is provided with more detailed project summaries that will be of interest to the technical community.

  4. Green Algae as Model Organisms for Biological Fluid Dynamics

    E-Print Network [OSTI]

    Goldstein, Raymond E

    2014-01-01T23:59:59.000Z

    In the past decade the volvocine green algae, spanning from the unicellular $Chlamydomonas$ to multicellular $Volvox$, have emerged as model organisms for a number of problems in biological fluid dynamics. These include flagellar propulsion, nutrient uptake by swimming organisms, hydrodynamic interactions mediated by walls, collective dynamics and transport within suspensions of microswimmers, the mechanism of phototaxis, and the stochastic dynamics of flagellar synchronization. Green algae are well suited to the study of such problems because of their range of sizes (from 10 $\\mu$m to several millimetres), their geometric regularity, the ease with which they can be cultured and the availability of many mutants that allow for connections between molecular details and organism-level behavior. This review summarizes these recent developments and highlights promising future directions in the study of biological fluid dynamics, especially in the context of evolutionary biology, that can take advantage of these re...

  5. Green Algae as Model Organisms for Biological Fluid Dynamics

    E-Print Network [OSTI]

    Raymond E. Goldstein

    2014-09-08T23:59:59.000Z

    In the past decade the volvocine green algae, spanning from the unicellular $Chlamydomonas$ to multicellular $Volvox$, have emerged as model organisms for a number of problems in biological fluid dynamics. These include flagellar propulsion, nutrient uptake by swimming organisms, hydrodynamic interactions mediated by walls, collective dynamics and transport within suspensions of microswimmers, the mechanism of phototaxis, and the stochastic dynamics of flagellar synchronization. Green algae are well suited to the study of such problems because of their range of sizes (from 10 $\\mu$m to several millimetres), their geometric regularity, the ease with which they can be cultured and the availability of many mutants that allow for connections between molecular details and organism-level behavior. This review summarizes these recent developments and highlights promising future directions in the study of biological fluid dynamics, especially in the context of evolutionary biology, that can take advantage of these remarkable organisms.

  6. Method and apparatus for determining nutrient stimulation of biological processes

    DOE Patents [OSTI]

    Colwell, Frederick S. (Idaho Falls, ID); Geesey, Gill G. (Bozeman, MT); Gillis, Richard J. (Bozeman, MT); Lehman, R. Michael (Idaho Falls, ID)

    1997-01-01T23:59:59.000Z

    A method and apparatus for determining the nutrients to stimulate microorganisms in a particular environment. A representative sample of microorganisms from a particular environment are contacted with multiple support means wherein each support means has intimately associated with the surface of the support means a different nutrient composition for said microorganisms in said sample. The multiple support means is allowed to remain in contact with the microorganisms in the sample for a time period sufficient to measure differences in microorganism effects for the multiple support means. Microorganism effects for the multiple support means are then measured and compared. The invention is particularly adaptable to being conducted in situ. The additional steps of regulating nutrients added to the particular environment of microorganisms can enhance the desired results. Biological systems particularly suitable for this invention are bioremediation, biologically enhanced oil recovery, biological leaching of metals, and agricultural bioprocesses.

  7. Method and apparatus for determining nutrient stimulation of biological processes

    DOE Patents [OSTI]

    Colwell, Frederick S. (Idaho Falls, ID); Geesey, Gill G. (Bozeman, MT); Gillis, Richard J. (Bozeman, MT); Lehman, R. Michael (Idaho Falls, ID)

    1999-01-01T23:59:59.000Z

    A method and apparatus for determining the nutrients to stimulate microorganisms in a particular environment. A representative sample of microorganisms from a particular environment are contacted with multiple support means wherein each support means has intimately associated with the surface of the support means a different nutrient composition for said microorganisms in said sample. The multiple support means is allowed to remain in contact with the microorganisms in the sample for a time period sufficient to measure difference in microorganism effects for the multiple support means. Microorganism effects for the multiple support means are then measured and compared. The invention is particularly adaptable to being conducted in situ. The additional steps of regulating nutrients added to the particular environment of microorganisms can enhance the desired results. Biological systems particularly suitable for this invention are bioremediation, biologically enhanced oil recovery, biological leaching of metals, and agricultural bioprocesses.

  8. 2007 Microbial Population Biology (July 22-26, 2007)

    SciTech Connect (OSTI)

    Anthony M. Dean

    2008-04-01T23:59:59.000Z

    Microbial Population Biology covers a diverse range of cutting edge issues in the microbial sciences and beyond. Firmly founded in evolutionary biology and with a strongly integrative approach, past meetings have covered topics ranging from the dynamics and genetics of adaptation to the evolution of mutation rate, community ecology, evolutionary genomics, altruism, and epidemiology. This meeting is never dull: some of the most significant and contentious issues in biology have been thrashed out here. We anticipate the 2007 meeting being no exception. The final form of the 2007 meeting is yet to be decided, but the following topics are likely to be included: evolutionary emergence of infectious disease and antibiotic resistance, genetic architecture and implications for the evolution of microbial populations, ageing in bacteria, biogeography, evolution of symbioses, the role of microbes in ecosystem function, and ecological genomics.

  9. Invited Review Article: Advanced light microscopy for biological space research

    SciTech Connect (OSTI)

    De Vos, Winnok H., E-mail: winnok.devos@uantwerpen.be [Laboratory of Cell Biology and Histology, Department of Veterinary Sciences, University of Antwerp, Antwerp (Belgium); Cell Systems and Imaging Research Group, Department of Molecular Biotechnology, Ghent University, Ghent (Belgium); Beghuin, Didier [Lambda-X, Nivelles (Belgium); Schwarz, Christian J. [European Space Agency (ESA), ESTEC, TEC-MMG, Noordwijk (Netherlands); Jones, David B. [Institute for Experimental Orthopaedics and Biomechanics, Philipps University, Marburg (Germany); Loon, Jack J. W. A. van [Department of Oral and Maxillofacial Surgery/Oral Pathology, VU University Medical Center and Department of Oral Cell Biology, Academic Centre for Dentistry Amsterdam, Amsterdam (Netherlands); Bereiter-Hahn, Juergen; Stelzer, Ernst H. K. [Physical Biology, BMLS (FB15, IZN), Goethe University, Frankfurt am Main (Germany)

    2014-10-15T23:59:59.000Z

    As commercial space flights have become feasible and long-term extraterrestrial missions are planned, it is imperative that the impact of space travel and the space environment on human physiology be thoroughly characterized. Scrutinizing the effects of potentially detrimental factors such as ionizing radiation and microgravity at the cellular and tissue level demands adequate visualization technology. Advanced light microscopy (ALM) is the leading tool for non-destructive structural and functional investigation of static as well as dynamic biological systems. In recent years, technological developments and advances in photochemistry and genetic engineering have boosted all aspects of resolution, readout and throughput, rendering ALM ideally suited for biological space research. While various microscopy-based studies have addressed cellular response to space-related environmental stressors, biological endpoints have typically been determined only after the mission, leaving an experimental gap that is prone to bias results. An on-board, real-time microscopical monitoring device can bridge this gap. Breadboards and even fully operational microscope setups have been conceived, but they need to be rendered more compact and versatile. Most importantly, they must allow addressing the impact of gravity, or the lack thereof, on physiologically relevant biological systems in space and in ground-based simulations. In order to delineate the essential functionalities for such a system, we have reviewed the pending questions in space science, the relevant biological model systems, and the state-of-the art in ALM. Based on a rigorous trade-off, in which we recognize the relevance of multi-cellular systems and the cellular microenvironment, we propose a compact, but flexible concept for space-related cell biological research that is based on light sheet microscopy.

  10. Concentrated formulations and methods for neutralizing chemical and biological toxants

    DOE Patents [OSTI]

    Tucker, Mark D.; Betty, Rita G.; Tadros, Maher E.

    2004-04-20T23:59:59.000Z

    A formulation and method of making and using that neutralizes the adverse health effects of both chemical and biological toxants, especially chemical warfare (CW) and biological warfare (BW) agents. The aqueous formulation is non-toxic and non-corrosive and can be delivered as a long-lasting foam, spray, or fog. The formulation includes solubilizing compounds that serve to effectively render the CW or BW toxant susceptible to attack, so that a nucleophillic agent can attack the compound via a hydrolysis or oxidation reaction. The formulation can kill up to 99.99999% of bacterial spores within one hour of exposure.

  11. Data-intensive computing laying foundation for biological breakthroughs

    SciTech Connect (OSTI)

    Hachigian, David J.

    2007-06-18T23:59:59.000Z

    Finding a different way is the goal of the Data-Intensive Computing for Complex Biological Systems (Biopilot) project—a joint research effort between the Pacific Northwest National Laboratory (PNNL) and Oak Ridge National Laboratory funded by the U.S. Department of Energy’s Office of Advanced Scientific Computing Research. The two national laboratories, both of whom are world leaders in computing and computational sciences, are teaming to support areas of biological research in urgent need of data-intensive computing capabilities.

  12. Biology Division progress report, October 1, 1993--September 30, 1995

    SciTech Connect (OSTI)

    NONE

    1995-10-01T23:59:59.000Z

    This Progress Report summarizes the research endeavors of the Biology Division of the Oak Ridge National Laboratory during the period October 1, 1993, through September 30, 1995. The report is structured to provide descriptions of current activities and accomplishments in each of the Division`s major organizational units. Lists of information to convey the entire scope of the Division`s activities are compiled at the end of the report. Attention is focused on the following research activities: molecular, cellular, and cancer biology; mammalian genetics and development; genome mapping program; and educational activities.

  13. Biological Imaging by Soft X-Ray Diffraction Microscopy

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative1 First Use of Energy for All Purposes (Fuel and Nonfuel), 2002; Level: National5Sales for4,645U.S. DOE Office511041clothAdvanced Materials Advanced Materials Find Find More LikeAndreasHelp TableBiologicalBiological

  14. Biological Imaging by Soft X-Ray Diffraction Microscopy

    Broader source: All U.S. Department of Energy (DOE) Office Webpages (Extended Search)

    AFDC Printable Version Share this resource Send a link to EERE: Alternative Fuels Data Center Home Page to someone by E-mail Share EERE: Alternative Fuels Data Center Home Page on Facebook Tweet about EERE: Alternative Fuels Data Center Home Page on Twitter Bookmark EERE: Alternative1 First Use of Energy for All Purposes (Fuel and Nonfuel), 2002; Level: National5Sales for4,645 3,625govInstrumentstdmadapInactiveVisiting the TWP TWPAlumniComplexMaterialProduction PetraBiologicalBiological

  15. Chemistry Biology Interface (CBI) Journal Club BICH 689-607

    E-Print Network [OSTI]

    Lindahl, Paul A.

    : Student-led Discussions Learning outcomes: To learn about research at the chemistry:biology interface will be divided into three sessions, each focused on a different topic. Session leaders will present a seminar during the first week of the session. This will be followed by 3-4 weeks of student-led discussions

  16. Biologically Enhanced Carbon Sequestration: Research Needs and Opportunities

    SciTech Connect (OSTI)

    Oldenburg, Curtis; Oldenburg, Curtis M.; Torn, Margaret S.

    2008-03-21T23:59:59.000Z

    Fossil fuel combustion, deforestation, and biomass burning are the dominant contributors to increasing atmospheric carbon dioxide (CO{sub 2}) concentrations and global warming. Many approaches to mitigating CO{sub 2} emissions are being pursued, and among the most promising are terrestrial and geologic carbon sequestration. Recent advances in ecology and microbial biology offer promising new possibilities for enhancing terrestrial and geologic carbon sequestration. A workshop was held October 29, 2007, at Lawrence Berkeley National Laboratory (LBNL) on Biologically Enhanced Carbon Sequestration (BECS). The workshop participants (approximately 30 scientists from California, Illinois, Oregon, Montana, and New Mexico) developed a prioritized list of research needed to make progress in the development of biological enhancements to improve terrestrial and geologic carbon sequestration. The workshop participants also identified a number of areas of supporting science that are critical to making progress in the fundamental research areas. The purpose of this position paper is to summarize and elaborate upon the findings of the workshop. The paper considers terrestrial and geologic carbon sequestration separately. First, we present a summary in outline form of the research roadmaps for terrestrial and geologic BECS. This outline is elaborated upon in the narrative sections that follow. The narrative sections start with the focused research priorities in each area followed by critical supporting science for biological enhancements as prioritized during the workshop. Finally, Table 1 summarizes the potential significance or 'materiality' of advances in these areas for reducing net greenhouse gas emissions.

  17. M. Madan Babu MRC Laboratory of Molecular Biology, Cambridge

    E-Print Network [OSTI]

    Babu, M. Madan

    M. Madan Babu MRC Laboratory of Molecular Biology, Cambridge Avenues and Career Options #12;Career options Undergraduate (B. Sc, B. Tech) 3-4 years Postgraduate (M. Sc, M. Tech) 2 years Ph. Sc, B. Tech) Postgraduate (M. Sc, M. Tech) PhD (Specialization) Teaching (Lecturer) Technical

  18. Online Course Syllabus STATS 8: Introduction to Biological Statistics

    E-Print Network [OSTI]

    Loudon, Catherine

    Online Course Syllabus Page 1 STATS 8: Introduction to Biological Statistics Summer Session II 2011. Baldi is a lecturer at UC Irvine where she has been teaching statistics for many years. She is also involved in the development of educational material for statistics, from helping to conceive a TV program

  19. SODIUM CYANIDE AS A FISH POISON Marine Biological Laboratory

    E-Print Network [OSTI]

    SODIUM CYANIDE AS A FISH POISON Marine Biological Laboratory APR 2 '^ 1958 WOODS HOLE, MASS CYANIDE AS A FISH POISON By W. R. Bridges Cooperative Fishery Research Laboratory Southern Illinois as a fish poison. At concentrations of 1 p. p.m. sodium cyanide and at a variety of temperature and p

  20. Controlled polymer synthesis--from biomimicry towards synthetic biology

    E-Print Network [OSTI]

    Davis, Ben G.

    . In particular, he develops competitive search methodologies and intelligent decision support systems over lengthscales ranging from a few nm to several microns is generating systems that not only begin and soft materials for synthetic biology. He is currently a research associate at IESL-FORTH, Heraklion

  1. Supramolecular Chemistry@PoliMI: Where Nano meets Biology

    E-Print Network [OSTI]

    Supramolecular Chemistry@PoliMI: Where Nano meets Biology 28-29 June, 2012 Aula De Donato Piazza:30-12:15 Jonathan W. Steed, Durhan University, United Kingdom Responsive Supramolecular gels 12:15-12:45 Alberto-assembly for Biomedical Applications 14:45-15:15 Markus Linder, VTT-Technical Research Centre of Finland Materials by self

  2. University of South Florida Department of Integrative Biology

    E-Print Network [OSTI]

    Lajeunesse, Marc J.

    .00*** Sample Preparation-Basic $30.00 (Mount Dry Sample, Sputter Coat) Sample Preparation-Biological-$160.00/Sample Sputter Coating $10.00/Run ***Plus Supplies *Non-educational Rates are 25% Higher Contact: Edward, bacteria, virus, implantable devices, nanoparticles, films and coatings. The Microscopy Core labs provide

  3. Departments of Chemistry and Pharmacology Center for Structural Biology

    E-Print Network [OSTI]

    Meiler, Jens

    ;6 December 2011 © Jens Meiler 2 Schedule for Lecture 7 De Novo Protein Fold Prediction with Rosetta) Protein Folding Problem Holy Grail of Comp. Struct. Biology Given a protein's AA sequence, what is its 3 than 1010 years old. Cyrus Levinthal's paradox of protein folding,1968. 6 December 2011 © Jens Meiler

  4. Molecular Biology of the Cell Vol. 16, 48524866, October 2005

    E-Print Network [OSTI]

    Paris-Sud XI, Université de

    Molecular Biology of the Cell Vol. 16, 4852­4866, October 2005 Helicobacter pylori VacA Cytotoxin cytotoxin VacA is a major virulence factor of Helicobacter pylori, a bacterium responsible for gastrodu-independent mechanism, and routed to the degradative compartment. INTRODUCTION Gastric infection by Helicobacter pylori

  5. THE BIOLOGY, ECOLOGY AND FUTURE CONSERVATION OF TWAITE SHAD (ALOSA

    E-Print Network [OSTI]

    McCarthy, T.K.

    THE BIOLOGY, ECOLOGY AND FUTURE CONSERVATION OF TWAITE SHAD (ALOSA FALLAX LACE´PE`DE), ALLIS SHAD'Maoile´idigh and T.K. McCarthy ABSTRACT Anadromous twaite shad (Alosa fallax Lace´pe`de) and allis shad (Alosa alosa undertaken on the marine phases of these species in Ireland except for occasional reports of coastal bycatch

  6. Publications: Harold G. Marshall Department of Biological Sciences

    E-Print Network [OSTI]

    Hynes, Wayne L.

    1 Publications: Harold G. Marshall Department of Biological Sciences Old Dominion University, Norfolk, Virginia, 23529-0266, U.S.A. (updated April 2012) Marshall, H.G. 2012. Cyanobacteria dominance. A. Bode, E. Breton, V. Cornet, J. Gibson, M. Gosselin, E. Kapczynska, H.G. Marshall, J. Peloquin, S

  7. Leading Edge Nuclear Biology: What's Been Most Surprising?

    E-Print Network [OSTI]

    Pikaard, Craig

    Leading Edge Voices Nuclear Biology: What's Been Most Surprising? Restricting Genomic Partners Job with inappropriate elements. So, a major question in the field of nuclear organization is how do cells ensure have demonstrated that thousands of regulatory regions undergo activation or decommissioning even

  8. Chemistry & Biology Hemoglobin Digestion in Blood-Feeding Ticks

    E-Print Network [OSTI]

    Bogyo, Matthew

    Chemistry & Biology Article Hemoglobin Digestion in Blood-Feeding Ticks: Mapping a Multipeptidase: mares@uochb.cas.cz DOI 10.1016/j.chembiol.2009.09.009 SUMMARY Hemoglobin digestion is an essential transmission is linked to the physiology of blood feeding and digestion. Blood provides a rich source

  9. Removal of Headspace CO2 Increases Biological Hydrogen

    E-Print Network [OSTI]

    For biological hydrogen production by fermentation to be a useful method of hydrogen generation, molar yields loss of hydrogen to methanogenesis, hydrogen is still lost to acetic acid generation from hydrogen.4 to 2.0 mol of H2/mol of glucose). The soluble byproducts in all tests consisted primarily of acetate

  10. Review article Molecular biology of fish viruses: a review

    E-Print Network [OSTI]

    Boyer, Edmond

    Review article Molecular biology of fish viruses: a review J Bernard, M Brémont* INRA, laboratoire aspects in the fish virus studies. Although more than 50 different fish virus have been isolated family, the fish lym- phocystis disease virus (FLDV) is the most studied. Retroviridae have been recently

  11. SCHOOL OF BIOLOGY HEALTH AND SAFETY POLICY STATEMENT

    E-Print Network [OSTI]

    Brierley, Andrew

    SCHOOL OF BIOLOGY HEALTH AND SAFETY POLICY STATEMENT 1. The Head of School is responsible for all matters of Health and Safety within the School: a. The Health and Safety of all school staff, while on duty. b. The Safety of any person in school areas. c. Ensuring that staff who work in other departments

  12. Computational Molecular Biology of Genome Expression and Regulation

    E-Print Network [OSTI]

    Computational Molecular Biology of Genome Expression and Regulation Michael Q. Zhang, Ph.D. Cold in genome expression and regulation network in which better modern statistical and machine learning referring to the cellular processes that lead to pro- tein production, is controlled and regulated

  13. Computational Molecular Biology Biochem 218 BioMedical Informatics 231

    E-Print Network [OSTI]

    the names of the genes and enter them in Go Term Finder to discover common biological processes, common the Yeast Cell Cycle Database by first entering a single gene of interest to you and then clicking on select all co- expressed genes: http://genome-www.stanford.edu/cgi-bin/cellcycle/search · Collect all

  14. NATIONAL CENTRE FOR BIOLOGICAL SCIENCES TATA INSTITUTE OF FUNDAMENTAL RESEARCH

    E-Print Network [OSTI]

    Udgaonkar, Jayant B.

    NATIONAL CENTRE FOR BIOLOGICAL SCIENCES TATA INSTITUTE OF FUNDAMENTAL RESEARCH GKVK, Bellary Road/I&C from contractors who have executed similar nature and magnitude of work, for the following work. 2 to this extent should be enclosed along with the application) (a) One work of similar nature costing Rs. 8

  15. Multiple ERK substrates execute single biological processes in Caenorhabditis elegans

    E-Print Network [OSTI]

    Multiple ERK substrates execute single biological processes in Caenorhabditis elegans germ, 2008) RAS-extracellular signal regulated kinase (ERK) signaling governs multiple aspects of cell fate. Understanding how perturbations to the ERK signaling pathway lead to developmental disorders and cancer hinges

  16. REGISTRATION FORM TEXAS TECH ANNUAL BIOLOGICAL SCIENCES SYMPOSIUM

    E-Print Network [OSTI]

    Rock, Chris

    breaks 3) Banquet Meal: West Texas BBQ @ Ranching Heritage Center Please indicate which meal option: MeatREGISTRATION FORM TEXAS TECH ANNUAL BIOLOGICAL SCIENCES SYMPOSIUM 2nd Annual Meeting, 1 - 2 April need a parking pass to park on the Texas Tech University Campus before 5:30pm on Friday, April 1st? YES

  17. Biology and Control of Floating Heart (Nymphoides cristata)

    E-Print Network [OSTI]

    Watson, Craig A.

    Biology and Control of Floating Heart (Nymphoides cristata) Leif Willey ­ University of Florida approaches ­ no accepted standard for control · Grass carp are not a viable option ­ Rapid spread in Lake · 3 soil types -L ake Toho (97% sand), -Orange Lake (77% O.M) -Potting soil mix · Highly fertile sand

  18. Modeling and Analysis of Heterogeneous Regulation in Biological Networks.

    E-Print Network [OSTI]

    Shamir, Ron

    Modeling and Analysis of Heterogeneous Regulation in Biological Networks. Irit Gat-Viks Amos Tanay of an integrative approach to the modeling and learning of regulation. In this work we study steady state behavior (metabolites may regulate transcription, enzymes may regulate metabolic reactions). We show how such models can

  19. SRNL-RP-2009-00869 BIOLOGY, DAMAGE,

    E-Print Network [OSTI]

    Ditchkoff, Steve

    . Lehr Brisbin, Jr. Editors Savannah River National Laboratory Aiken, South Carolina 2009 #12;ii University, Auburn, Alabama 36849 (SSD) Savannah River National Laboratory, Savannah River Nuclear Solutions University of Georgia - Savannah River Ecology Laboratory #12;Wild Pigs 105 Biology of Wild Pigs: Wild Pig

  20. SchoolofMedicalSciences BSc (Hons) Molecular Biology

    E-Print Network [OSTI]

    Levi, Ran

    Catalogue of Courses or SMS World Wide Web Pages for names). The Head of School of Medical Sciences as to the development of improved crops. Graduates in molecular biology have a wide range of career options, including, and in the transferable skills associated with mastering statistics, graphics and word processing software packages

  1. Genomics and computational molecular biology Douglas L Brutlag

    E-Print Network [OSTI]

    Brutlag, Doug

    340 Genomics and computational molecular biology Douglas L Brutlag There has been a dramatic increase in the number of completely sequenced bacterial genomes during the past two years as a result of the efforts both of public genome agencies and the pharmaceutical industry. The availability of completely

  2. Model calculations of nuclear data for biologically-important elements

    SciTech Connect (OSTI)

    Chadwick, M.B.; Blann, M.; Reffo, G. [Lawrence Livermore National Lab., CA (United States); Young, P.G. [Los Alamos National Lab., NM (United States)

    1994-05-01T23:59:59.000Z

    We describe calculations of neutron-induced reactions on carbon and oxygen for incident energies up to 70 MeV, the relevant clinical energy in radiation neutron therapy. Our calculations using the FKK-GNASH, GNASH, and ALICE codes are compared with experimental measurements, and their usefulness for modeling reactions on biologically-important elements is assessed.

  3. Trading Water for Carbon with Biological Carbon Sequestration

    E-Print Network [OSTI]

    Nacional de San Luis, Universidad

    Trading Water for Carbon with Biological Carbon Sequestration Robert B. Jackson,1 * Esteban G. Farley,1 David C. le Maitre,5 Bruce A. McCarl,6 Brian C. Murray7 Carbon sequestration strategies plantations feature prominently among tools for carbon sequestration (1­8). Plantations typi- cally combine

  4. Brief Communications Unstable Representation of Sound: A Biological Marker of

    E-Print Network [OSTI]

    Brief Communications Unstable Representation of Sound: A Biological Marker of Dyslexia Jane and reading skills. Children with dyslexia, who often exhibit impairments in auditory-based perceptual skills manifestations of auditory impairments in dyslexia include impaired perception of speech in background noise

  5. Ultrasound-modulated optical tomography in soft biological tissues

    E-Print Network [OSTI]

    Sakadzic, Sava

    2007-09-17T23:59:59.000Z

    Ultrasound-modulated Optical Tomography in Soft Biological Tissues. (May 2006) Sava Sakad•zi¶c, B.S., University of Belgrade, Serbia and Montenegro; M.S., University of Belgrade, Serbia and Montenegro Chair of Advisory Committee: Dr. Lihong V. Wang Optical...

  6. IAP Statement on Realising Global Potential in Synthetic Biology: Scientific

    E-Print Network [OSTI]

    Swain, Peter

    in the generation and optimal use of biofuels. Further ahead there are possible applications of this biological or a less radical, incremental advance. It is the purpose of the present IAP Statement, based on previous and ongoing academy activities, to emphasise that the advance of science must be connected to global policy

  7. September 2004 313NEW BIOLOGICAL BOOKS differentiation, morphogenesis, signal transduction,

    E-Print Network [OSTI]

    Lehmann, Johannes

    - tors. It is recommended for acquisition by univer- sity libraries. Jianxiong Li, Biochemistry & Cell Biology, State University of New York, Stony Brook, New York Sustainable Soils: The Place of Organic Mat- ter in Sustaining Soils and Their Productiv- ity. By Benjamin Wolf and George H Snyder. Food Prod

  8. Quantum dot-based nanomaterials for biological imaging

    E-Print Network [OSTI]

    Zimmer, John P. (John Philip)

    2006-01-01T23:59:59.000Z

    Quantum dot-based fluorescent probes were synthesized and applied to biological imaging in two distinct size regimes: (1) 100-1000 nm and (2) < 10 nm in diameter. The larger diameter range was accessed by doping CdSe/ZnS ...

  9. The chemical properties and biological significance of gossypol protein complexes

    E-Print Network [OSTI]

    Baliga, Bantval Prabhakara

    1956-01-01T23:59:59.000Z

    ................................. 2 III. REVIEW OF LITERATURE ......................... 4 1. Cottonseed Proteins ....................... 4 2. Evaluation of Proteins ................... 5 5. The Pigments of Cottonseed.............. 11 4. The Physiological Significance of Free...-Protein Complexes . 59 5. Chemical Analysis of Cottonseed Meal and Gossypol-Protein Complexes .......... 59 4. Biological Evaluation ..................... 44 5. Enzymatic Hydrolysis of Gossypol-Protein Complexes............................. 46 6. Bibliography...

  10. Brownian ratchets in physics and biology MARTIN BIER

    E-Print Network [OSTI]

    Bier, Martin

    Brownian ratchets in physics and biology MARTIN BIER Thirty years ago Feynman et al. presented that such ratcheting can only be achieved if there is, in compliance with the basic conservation laws, some energy input from an external source. Now that technology is going into ever smaller dimensions, ratcheting

  11. Air Pollution Impacts on Ecosystems and Biological Diversity

    E-Print Network [OSTI]

    Air Pollution Impacts on Ecosystems and Biological Diversity in the Eastern United States Threats CITATION Lovett, G.M., and T.H. Tear. 2008. Threats from Above: Air Pollution Impacts on Ecosystems and nitrogen pollution. © Eric Middelkoop/BigStockPhoto.com Botom: A newly hatched common loon chick is watched

  12. JOURNAL OF COMPUTATIONAL BIOLOGY Volume 11, Numbers 23, 2004

    E-Print Network [OSTI]

    Donald, Bruce Randall

    residues, 100% accuracy), matched to a variety of 3D structural models. Finally, we extend NVR to a second-throughput NMR structural biology can play an important role in structural genomics. We report an automated-protein 3D structural model. The algorithm requires only uniform 15 N-labeling of the protein and processes

  13. Proton Transfer and Hydrogen Bonding in Chemical and Biological

    E-Print Network [OSTI]

    Amrhein, Valentin

    Proton Transfer and Hydrogen Bonding in Chemical and Biological Systems: A Force Field Approach and support. i #12;ii #12;Abstract Proton transfer and hydrogen bonds are fundamental for the function be regarded as incipient proton transfer reactions, so theoretically they can be de- scribed in unitary way

  14. Biological Removal of Siloxanes from Landfill and Digester Gases

    E-Print Network [OSTI]

    Biological Removal of Siloxanes from Landfill and Digester Gases: Opportunities and Challenges S U) presents challenges for using landfill and digester gases as energy fuels because of the formation volatilize from waste at landfills and wastewater treatment plants (1). As a result, biogas produced

  15. Biomimetic Mineralization: Mesoporous Biological mineral synthesis, in contrast to conven-

    E-Print Network [OSTI]

    Biomimetic Mineralization: Mesoporous Structures Biological mineral synthesis, in contrast of mineral crystals. Mesophases are materials which have domain length scales of the order of a few as a molecular blueprint for the site- directed formation of the inorganic phase, by providing an interface

  16. AbstractThe reproductive biology of the whitemouth croaker (Micropogo

    E-Print Network [OSTI]

    ) inhabiting the estuarine waters of the Río de la Plata (Argen tina-Uruguay) was studied by using histological, Argentina-Uruguay Gustavo J. Macchi Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET as an order of Uruguay (Lasta and Acha, 1996). magnitude (DeMartini and Fountain, The reproductive biology

  17. Biological Conversion of Sugars to Hydrocarbons Technology Pathway

    SciTech Connect (OSTI)

    Davis, R.; Biddy, M.; Tan, E.; Tao, L.; Jones, S.

    2013-03-01T23:59:59.000Z

    This technology pathway case investigates the biological conversion of biomass-derived sugars to hydrocarbon biofuels, utilizing data from recent literature references and information consistent with recent pilot-scale demonstrations at NREL. Technical barriers and key research needs have been identified that should be pursued for the pathway to become competitive with petroleum-derived gasoline-, diesel-, and jet-range hydrocarbon blendstocks.

  18. Biological Water Gas Shift DOE Hydrogen, Fuel Cell, and Infrastructure

    E-Print Network [OSTI]

    (go/no go) ­ Demonstrate 100-L WGS Bioreactor #12;WGS Flow Chart - Conventional & Biological and Sharon Smolinski National Renewable Energy Laboratory Operated for the U.S. Department of Energy Yields Energy in Darkness · CO supports both cell growth and ATP synthesis, in darkness · ATP can be used

  19. ECOLOGY ABIO 320 FALL 2013 DR. CARACO BIOLOGY 253

    E-Print Network [OSTI]

    Caraco, Thomas

    1 ECOLOGY ABIO 320 FALL 2013 DR. CARACO BIOLOGY 253 Course Web Page: www Scores Links to Lectures #12;2 Texts Gotelli, NJ. A Primer of Ecology. 4 th Edit., 2008 (Required ) Alstad, D. Basic Populus Models of Ecology. 2001 [Rec ] Link to Download Populus on Course Web Page

  20. Ecology and Evolution Major www.biology.pitt.edu

    E-Print Network [OSTI]

    Jiang, Huiqiang

    Ecology and Evolution Major www.biology.pitt.edu Revised: 07/2012 The field of Ecology explores organisms have developed from ancestral ones. The Ecology and Evolution major is a good choice for students world, the ecological relationships of organisms from the individual to the global scale

  1. Computer Science Department Technion, IIT Algorithms in Computational Biology 236522

    E-Print Network [OSTI]

    Beimel, Amos

    Computer Science Department Technion, IIT Algorithms in Computational Biology ­ 236522 Moed A Exam Spring 2007, 24.9.07 Lecturer: Shlomo Moran TA: Ilan Gronau - Exam Duraion: 3 hours - The Exam has 3 structure can be used to answer the desired queries. 2. (23 pts) Denote by Si the sequence S after deletion

  2. Theoretical Population Biology 69 (2006) 231233 ESS theory now

    E-Print Network [OSTI]

    Lessard, Sabin

    Theoretical Population Biology 69 (2006) 231­233 Editorial ESS theory now More than 30 years have passed since the concept of evolutionarily stable strategy (ESS) was introduced in the context of animal of the ESS concept. Even today the main idea, and the more general one, remains to look for a population

  3. Meta-DNA: synthetic biology via DNA nanostructures and

    E-Print Network [OSTI]

    Reif, John H.

    Meta-DNA: synthetic biology via DNA nanostructures and hybridization reactions Harish Chandran1 of DNA manipulations achieved by protein enzymes be simulated via simple DNA hybridization chemistry? In this work, we develop a biochemical system which we call meta-DNA (abbreviated as mDNA), based on strands

  4. Departments of Chemistry and Pharmacology Center for Structural Biology

    E-Print Network [OSTI]

    Meiler, Jens

    Scoring Matrices Dot Product Alignment Dynamic Programming Algorithm BLAST Algorithm Homework Assignment #12;Structural Biology After the Human Genome Project 6 December 2011 © Jens Meiler 3 #12;Millions? Gap penalties can be modeled as linear depending on the length: penalty It is more likely

  5. Hemodynamically Driven Vein Graft Remodeling: A Systems Biology Approach

    E-Print Network [OSTI]

    Garbey, Marc

    no influence on the clinical outcomes following vein graft implantation. Analysis of the decision points vascular biology literature into the clinical care of patients. Recent failures in the Corgentech in an animal vein graft model, human phase I and II clinical studies were initiated.1-3 Demonstrating safety

  6. 3D Printing of Functional and Biological Materials

    E-Print Network [OSTI]

    ! 3D Printing of Functional and Biological Materials Jennifer A. Lewis Wyss Professor)! Multimaterial 3D printing ! #12;3D antennas! Li ion microbatteries! Lightweight microlattices!Flexible sensors! 3D Printing of Integrated Electronic Devices ! #12;20 nm average , 5 ­ 50 nm

  7. Microfluidics for biological analysis: Triumphs and hurdles of CD platforms

    E-Print Network [OSTI]

    Joshi, Yogesh Moreshwar

    Microfluidics for biological analysis: Triumphs and hurdles of CD platforms JONATHAN SIEGRIST1 , R on microfluidic technologies has become extensive, particularly in regards to the develop- ment of sample. Centrifugal microfluidic platforms based on the compact-disc format are discussed, along with the advantages

  8. INTEGRATION OF OPTOELECTRONICS AND MICROFLUIDICS FOR BIOLOGICAL AND CHEMICAL SENSING

    E-Print Network [OSTI]

    Quake, Stephen R.

    INTEGRATION OF OPTOELECTRONICS AND MICROFLUIDICS FOR BIOLOGICAL AND CHEMICAL SENSING Thesis by Mark Over the past decade, rapid advances in microfluidics have led to the creation of valves, pumps, mixers of microfluidics is the need for a typically large interrogation setup to determine what is actually happening

  9. Defossiling Fuel: How Synthetic Biology Can Transform Biofuel Production

    E-Print Network [OSTI]

    Defossiling Fuel: How Synthetic Biology Can Transform Biofuel Production David F. Savage , Jeffrey production is pre- dicted to peak soon, it is reason- able to assume that unconventional fossil fuel sources and economic energy volatility, and smoothing the transition from fossil fuels in the distant future

  10. Survey of Critical Biological Resources Garfield County, Colorado

    E-Print Network [OSTI]

    Survey of Critical Biological Resources Garfield County, Colorado Volume I Prepared for Garfield of the Garfield County Commissioners, the Planning Department, and the Assessor's office. We received much help and good advice from the Bureau of Land Management, especially Carla Scheck and Dan Sokal in the Glenwood

  11. Principles of Science Principles of Biology Reference Edition

    E-Print Network [OSTI]

    Cai, Long

    topics such as cancer, climate change and ocean health #12;How can the Principles of Biology Reference · Weekly usage reports · Advice to students seeking science careers · English communication guide to Scientific Communication · Guide to Career Planning · Insight into current science research hot topics High

  12. Biology and Management of Fungal Pathogens of Vegetables Program Leader

    E-Print Network [OSTI]

    Lazzaro, Brian

    of cucurbit and solanaceous crops. This water mold was recently found on snap beans in New York on Long Island Summary: Biology and management of Sclerotinia sclerotiorum (cause of white mold) on beans (snap, soy strategies for control of Phytophthora capsici on snap beans (cause of Phytophthora blight), including

  13. Supporting Advanced Scientific Computing Research Basic Energy Sciences Biological

    E-Print Network [OSTI]

    Supporting Advanced Scientific Computing Research · Basic Energy Sciences · Biological and Environmental Research · Fusion Energy Sciences · High Energy Physics · Nuclear Physics What my students Code ­http://code.google.com/p/net-almanac/ ­Beta release this week #12;Contact Information Jon Dugan

  14. Review Article Aluminum-Induced Entropy in Biological Systems

    E-Print Network [OSTI]

    Seneff, Stephanie

    Review Article Aluminum-Induced Entropy in Biological Systems: Implications for Neurological years, mining, smelting, and refining of aluminum (Al) in various forms have increasingly exposed living of the Al toxicants to which we are being exposed. 1. Introduction Aluminum (Al) is the most common metal

  15. JOURNAL OF COMPUTATIONAL BIOLOGY Volume 11, Number 4, 2004

    E-Print Network [OSTI]

    Vazquez, Mariel

    JOURNAL OF COMPUTATIONAL BIOLOGY Volume 11, Number 4, 2004 © Mary Ann Liebert, Inc. Pp. 626 in the classification of complex chromosome aberrations (e.g., Schröck et al., 2000, Anderson et al., 2003; Savage, 2002); in particular, mFISH has been successfully used in recent analyses of irradiated human cells (Anderson et al

  16. Fuzzy predictive control for nitrogen removal in biological wastewater treatment

    E-Print Network [OSTI]

    Fuzzy predictive control for nitrogen removal in biological wastewater treatment S. Marsili predictive control; wastewater treatment plant Introduction The problem of improving the nitrogen removal wastewater is too low, full denitrification is difficult to obtain and an additional source of organic carbon

  17. Chemical Biology Chemical Screening for Hair Cell Loss and Protection

    E-Print Network [OSTI]

    Rubel, Edwin

    Chemical Biology Chemical Screening for Hair Cell Loss and Protection in the Zebrafish Lateral Line Rubel,1,2 and David W. Raible1,4 Abstract In humans, most hearing loss results from death of hair cells, the mechanosensory receptors of the inner ear. Two goals of current hearing research are to protect hair cells from

  18. Document prepared 1/8/09 The Department of Biology

    E-Print Network [OSTI]

    Crews, Stephen

    Document prepared 1/8/09 The Department of Biology Comprehensive Feasibility of Dissertation to this document. · Distribute the proposal to the committee 1-2 weeks prior to the meeting. · Obtain a copy Administrative Assistant. The Oral Exam: Comprehensive exams are managed by the student's thesis committee

  19. JOURNAL OF COMPUTATIONAL BIOLOGY Volume 9, Number 3, 2002

    E-Print Network [OSTI]

    Bailey, Timothy L.

    JOURNAL OF COMPUTATIONAL BIOLOGY Volume 9, Number 3, 2002 © Mary Ann Liebert, Inc. Pp. 575 Sequence similarity searches are probably the single most widely used bioinformatics tool. The similarity ed for gaps of different lengths. The gapped, local-alignment score is computed by aligning a region

  20. JOURNAL OF COMPUTATIONAL BIOLOGY Volume 14, Number 3, 2007

    E-Print Network [OSTI]

    Rosenberg, Noah

    JOURNAL OF COMPUTATIONAL BIOLOGY Volume 14, Number 3, 2007 © Mary Ann Liebert, Inc. Pp. 360­377 DOI is computed, and these probabilities are summed over all coalescent histories compatible with the species tree--"valid" coalescent histories--are Department of Human Genetics, Bioinformatics Program, and the Life Sciences