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SOFTWARE ABSTRACT

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PACKAGE ID002820WKSTN00LMAT V.1.0
KWIC TitleLivermore Metagenomics Analysis Toolkit 
AUTHORSS. Ames, D. Hysom, M. Gokhale, J. Allen
LIMITATION/AUDIENCE CODECOPY/OPNS
COMPLETION DATE 10/01/2012 
PUBLICATION DATE10/01/2012 
DESCRIPTIONLMAT is designed to take as input a collection of raw metagenomic sequencer reads, and search each read against a reference genome database and assign a taxonomic label and confidence value to each read and report a summary of the predicted taxonomic contents of the metagenomic sample. 
PACKAGE CONTENTSOpen Source Software package available from Lawrence Livermore National Laboratory at the following URL: https://sourceforge.net/projects/lmat/ 
SOURCE CODE INCLUDED?
MEDIA URLhttps://sourceforge.net/projects/lmat/ 
MEDIA QUANTITY
COMPUTERWORKSTATION 
OPERATING SYSTEMSLinux 
ABSTRACT STATUSReleased As-Is 12/27/2012 
SPONSORUSDOE 
RESEARCH ORGLLNL 
PACKAGE TYPEAS-IS 

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