Fay, Justin - Center for Genome Sciences & Department of Genetics, Washington University in St. Louis

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Fay, Justin - Center for Genome Sciences & Department of Genetics, Washington University in St. Louis

Identification of functional transcription factor binding sites using closely related
Evidence for Domesticated and Wild Populations of Saccharomyces cerevisiae
We are resubmitting a white paper entitled, "Resequencing multiple strains of Saccharomyces cerevisiae". Both the Comparative Genome Evolution (CGE) working group and
Copyright 2000 by the Genetics Society of America Hitchhiking Under Positive Darwinian Selection
Statistical Tests for Detecting Positive Selection by Utilizing High Frequency SNPs
Mol. Biol. Evol. 16(7):10031005. 1999 1999 by the Society for Molecular Biology and Evolution. ISSN: 0737-4038
R E S E A R C H A R T I C L E Dissecting the pleiotropic consequences ofa quantitative trait
10.1101/gr.092619.109Access the most recent version at doi: 2009 19: 1553-1561 originally published online July 14, 2009Genome Res.
65Detecting Hitchhiking from Patterns of DNA Polymorphism Detecting Hitchhiking from Patterns
Is Transcription Factor Binding Site Turnover a Sufficient Explanation for Cis-Regulatory Sequence Divergence?
A Catalog of Neutral and Deleterious Polymorphism in Scott W. Doniger1
SHORT REVIEW Evaluating the role of natural selection in the
Genetic variation in the cysteine biosynthesis pathway causes sensitivity to
Copyright 2005 by the Genetics Society of America DOI: 10.1534/genetics.105.042283
Genome Biology 2004, 5:R26 commentreviewsreportsdepositedresearchrefereedresearchinteractionsinformation
Annu. Rev. Genomics Hum. Genet. 2003. 4:21335 doi: 10.1146/annurev.genom.4.020303.162528
5. Charlesworth, B. The effect of background selection against deleterious mutations on weakly selected, linked variants. Genet. Res. 63, 213227 (1994).
A number of tests have been developed to detect positive selection at the molecular level. These tests are based on DNA
RESEARCH ARTICLE Open Access Primate-specific evolution of noncoding element
Copyright 2009 by the Genetics Society of America DOI: 10.1534/genetics.109.108068
Frequent Gain and Loss of Functional Transcription Factor Binding Sites
Copyright 2001 by the Genetics Society of America Positive and Negative Selection on the Human Genome
Evidence for Hitchhiking of Deleterious Mutations within the Human Genome
Weighing the evidence for adaptation at the molecular level
Weighing the evidence for adaptation at the molecular level
R E S E A R C H A R T I C L E Divergence in wine characteristics produced by wild and