Economou, Tassos - Institute of Molecular Biology and Biotechnology, Foundation of Research and Technology, Hellas

• 5' -> 3' AUUCCUCCAC
• Molecular Microbiology (2004) 52(1), 311 doi:10.1111/j.1365-2958.2003.03966.x 2004 Blackwell Publishing Ltd
• Journal of Biotechnology xxx (2005) xxxxxx Functional large-scale production of a novel
• centrifugation. Respiration and OXPHOS enzyme activities were normalized for protein concentration using the Coomassie Stain kit (Pierce)13,19
• The cell... The cell is...
• More than folding: localized functions of cytosolic chaperones
• Jean-Paul Lasserre1 Emmanuelle Beyne2
• Vol. 174, No. 12JOURNAL OF BACTERIOLOGY, June 1992, p. 4026-4035 0021-9193/92/124026-10$02.00/0
• The cell... The cell is...
• Bacterial secretome: the assembly manual and operating instructions (Review) Anastassios Economou*
• Supplementary Figures Figure S1 1H15N HSQC spectra of (a) 15NSecAC and (b) 15NwildtypeSecA. The
• Microbiology (1994), 140, 2341-2347 Printed in Great Britain The Rhizobium Ieguminosarum biovar viciae
• Cell, Vol. 92, 351366, February 6, 1998, Copyright 1998 by Cell Press The Hsp70 and Hsp60 Review
• Lab Times4-2007 page 3Editorial ... that's the headline of an interview with the Secretary General
• Tandem mass spectrometry of integral membrane proteins for
• 4264 2004 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim Angew. Chem. Int. Ed. 2004, 43, 4264 Ion Channels
• A R T I C L E S 884 VOLUME 11 NUMBER 9 SEPTEMBER 2004 NATURE STRUCTURAL & MOLECULAR BIOLOGY
• Structure of Dimeric SecA, the Escherichia coli Preprotein Translocase Motor
• Cell, Vol. 107, 361372, November 2, 2001, Copyright 2001 by Cell Press Architecture of the Protein-Conducting Channel
• Available online at www.sciencedirect.com Function and structure of inherently disordered proteins
• Preprotein-controlled catalysis in the helicase motor of SecA
• Cell, Vol. 78, 911-913, September 23, 1994, Copyright 0 1994 by Cell Press Translocation Gets a Push Minireview
• 30S 50S 70S - RNAs
• ORIGINAL PAPER Using nanoelectrospray ion mobility spectrometry
• MicroReview SecA: a tale of two protomersmmi_7176 1070..1081
• NatioNal academy of ScieNceS NatioNal academy of eNgiNeeriNg iNStitute of mediciNe NatioNal reSearch couNcil : DNA -
• To cross cellular membranes, secretory proteins use specialized channels such as that known as
• Assembly of the translocase motor onto the preprotein-conducting channel
• In cells from all three domains of life, more than one-third of the proteome is secreted across, or inserted
• Meeting Report Secretion by numbers: protein traffic in prokaryotes
• Double hexameric ring assembly of the type III protein translocase ATPase HrcN
• Identification of the Preprotein Binding Domain of SecA*S Received for publication,September 12, 2005, and in revised form, October 12, 2005 Published, JBC Papers in Press,October 21, 2005, DOI 10.1074/jbc.M509990200
• Escherichia coli SecA truncated at its termini is functional and dimeric Spyridoula Karamanou, Giorgos Sianidis, Giorgos Gouridis, Charalambos Pozidis,
• Helicase Motif III in SecA is essential for coupling preprotein binding to translocation ATPase
• Structure and function of SecA, the preprotein translocase nanomotor Eleftheria Vrontou, Anastassios Economou*
• Type III Protein Translocase HrcN IS A PERIPHERAL MEMBRANE ATPASE THAT IS ACTIVATED BY OLIGOMERIZATION*
• Indecisive M13 Procoat Protein Mutants Bind to SecA but Do Not Activate the Translocation ATPase*
• Protein Secretion Biotechnology Using Streptomyces lividans: Large-Scale
• Sec and drugs and rock'n'roll: antibiotic targeting of bacterial protein translocation Anti-infectives
• A molecular switch in SecA protein couples ATP hydrolysis to protein translocation
• Separable ATPase and Membrane Insertion Domains of the SecA Subunit of Preprotein Translocase*
• Cell, Vol. 83, 1171-1181, December 29, 1995, Copyright 0 1995 by Cell Press SecA Membrane Cycling at SecYEG Is Driven
• Molecular Microbiology (1992) 6(2), 231-238 Secretion of the Rhizobium leguminosarum nodulation
• Molecular Microbiology (1990) 4(2), 245-252 Molecular characterization of the nodulation gene,
• FEMS MicrobiologyEcology62 (1989)103-110 103 Publishedby Elsevier
• Mini Prep Cell Instruction
• 3rd in a series Richard Zimmermann
• Martin C. Raff Medical Research Council Laboratory for Molecular
• http://ecoserver.imbb.forth.gr/BIO321.htm Ribosome makes proteins
• http://ecoserver.imbb.forth.gr/BIO321.htm The peptide bond
• DOI: 10.1126/science.1124619 , 212 (2006);312Science
• 2001 Macmillan Magazines Ltd The division of eukaryotic cells into numerous mem-
• The Protein Import Machinery of Mitochondria*
• 198 | MARCH 2004 | VOLUME 5 www.nature.com/reviews/molcellbio R E V I E W S
• mitosis by inhibiting the APCCdc20 complex. Nat. Cell Biol. 6, 10 Dammann, R. et al. (2000) Epigenetic inactivation of a RAS association
• TheJournalofCellBiology The Rockefeller University Press, 0021-9525/2004/09/769/6 $8.00
• SecB, one small chaperone in the complex milieu of the cell L. L. Randalla,
• Structural insight into the protein translocation channel William M Clemons Jr1
• Bacterial Injection Machines* Published, JBC Papers in Press, May 19, 2003,
• Current Topics The Ribosome at Atomic Resolution
• news and views NATURE|VOL427|29JANUARY2004|www.nature.com/nature 407
• 7. A. L. Casselman and J. B. Nasrallah, unpublished data. 8. J. A. Conner, P. Conner, M. E. Nasrallah, J. B. Nasrallah,
• Energy transduction in transmembrane Marc T. Facciotti1
• NATURE |VOL 405 |8 JUNE 2000 |www.nature.com 647 Crystal structure of the calcium pump
• BIO408/BIO506 Interactome
• Abstract The majority of techniques currently employed to interrogate a biomolecular interaction require some
• Measuring proteinprotein interactions Jeremy H Lakey and Elaine M Raggett
• MICROBIOLOGICAL REVIEWS, Mar. 1995, p. 94123 Vol. 59, No. 1 0146-0749/95/$04.00 0
• Protein chip technology and Michael Snydery
• , , C, S, P, H .... DNA, RNA
• 5' -> 3' AUUCCUCCAC
• Subscriber access provided by NORTHEASTERN UNIV LIB Journal of Proteome Research is published by the American Chemical Society.
• Molecular Cell YidC and Oxa1 Form Dimeric Insertion Pores
• www.sciencemag.org/cgi/content/full/1159292/DC1 Supporting Online Material for
• 32WWW.CEN-ONLINE.ORG DECEMBER 13, 2010 THE OLD ADAGE thatpeopleareknown
• 10/11/10 08:59On Plasmids -The Scientist -Magazine of the Life Sciences Page 1 of 3http://www.the-scientist.com/article/display/57773/
• JOURNAL OF BACTERIOLOGY, 0021-9193/99/$04.00 0
• BIO321-Lec10 The cell...
• PMM -111 Nanoelectrospray Differential Ion Mobility Spectrometry for Protein Sizing and Molecular Mass Determination: Method Development and
• Bacterial protein translocase: a unique molecular machine with an army of substrates
• Crystal Structure of the Ribosome at 5.5 Resolution
• Global Co-ordination of Protein Translocation by the SecA IRA1 Switch*
• Christopher M. Dobson wo greatly debilitating illnesses --
• Cell, Vol. 92, 291294, February 6, 1998, Copyright 1998 by Cell Press The Cell as a Collection Overview
• The Way Things Move: Looking Under the Hood of Molecular Motor Proteins
• TRENDS in Biochemical Sciences Vol.26 No.10 October 2001 http://tibs.trends.com 0968-0004/01/$ see front matter 2001 Elsevier Science Ltd. All rights reserved. PII
• SRP Keeps Polypeptides Translocation-Competent by Slowing Translation to
• ARTICLE IN PRESS 2 Structure and function of SecA, the preprotein translocase nanomotor
• Please cite this article in press as: M.F. Khan, et al., Proteomics by mass spectrometry--Go big or go home? J. Pharm. Biomed. Anal. (2011), doi:10.1016/j.jpba.2011.02.012
• The EMBO Journal vol.9 no.2 pp.349-354, 1990 The Rhizobium nodulation gene nodO encodes a
• The ATPase Domain of SecA Can Form a Tetramer in Solution
• From living cells to atoms Compartmentalisation in the cell
• Protein Expression and PuriWcation xxx (2005) xxxxxx www.elsevier.com/locate/yprep
• Annu. Rev. Biochem. 2001. 70:75575 Copyright c 2001 by Annual Reviews. All rights reserved
• Membrane Proteins Aquaporin Water Channels (Nobel Lecture)**
• Karamanou et al, Supplement Supplemental Table 1
• Energy use by biological protein transport pathways
• Cell, Vol. 112, 467480, February 21, 2003, Copyright 2003 by Cell Press ReviewThe Molecular Motor Toolbox
• Cell, Vol. 107, 373386, November 2, 2001, Copyright 2001 by Cell Press Structure of the 80S Ribosome
• Mini Prep Cell Assembly Guide For more details, refer to the Instruction Manual.
• Miniseries: Illustrating the Machinery of Life Escherichia coli*
• Spatially controlled bond formation has been realized with the STM. The fact that the
• Review R133 The ribosome --a macromolecular machine par excellence
• 116 -- /. Lowry Bradford.
• Comparative Proteomics Analyses Reveal the virB of B. melitensis Affects Expression of Intracellular Survival
• idence for such stabilization has been seen in solution studies, and direct MHC class II
• Model 491 Prep Cell Bio-Rad Tech Note Summaries
• insight review articles 208 NATURE | VOL 422 | 13 MARCH 2003 | www.nature.com/nature
• Journal of Biotechnology xxx (2006) xxxxxx Cloning, purification and characterization of a
• R E V I E W : P R O T E I N F O L D I N G Molecular Chaperones in the Cytosol: from
• Functional genomics by mass spectrometry Jens S. Andersen, Matthias Mann*
• nformation transfer in the living cell does not end with
• Structural Basis for Signal-Sequence RecognitionbytheTranslocaseMotorSecA
• Signal peptides are allosteric activators of the protein translocase
• Mini Prep Cell and Model 491 Prep Cell Starter Kit Instructions This is your Prep Cell starter kit. The kit has been provided to demonstrate how well the Prep Cell resolves two
• DOI: 10.1126/science.1159292 , 243 (2008);321Science
• Diversification of a Salmonella Virulence Protein Function by Ubiquitin-Dependent
• The proteome of Saccharomyces cerevisiae mitochondria
• 33 ...., , 19-21 2011 1 33 ...., , 19-21 20112
• DOI: 10.1126/science.1168978 , 218 (2009);324Science
• Appl Microbiol Biotechnol (2004) 64: 625635 DOI 10.1007/s00253-004-1559-9
• Escherichia coli SecA shape and dimensions Brian Shilton
• 1 Apr 2004 20:30 AR AR220-BE06-10.tex AR220-BE06-10.sgm LaTeX2e(2002/01/18) P1: IKH AR REVIEWS IN ADVANCE10.1146/annurev.bioeng.6.040803.140143
• Allosteric Communication between Signal Peptides and the SecA Protein DEAD Motor ATPase Domain*
• Molecular Biology of the Cell Vol. 12, 251254, February 2001
• Molecular Microbiology {1989} 3(1), 87-93 Transcription of rhiA, a gene on a Rhizobium
• http://ecoserver.imbb.forth.gr/BIO321.htm Cell slice
• Copyright C Munksgaard 2001 Traffic 2001 2: 245251
• Development of a high-throughput screening assay for the discovery of small-molecule SecA inhibitors
• What is the hydrodynamic radius (RH)? Chapter: Dynamic Light Scattering
• Supplementary Materials and methods Genetic constructs
• BIO1502/1403 Proteins in the cell
• BIO1502/BIO1403 http://ecoserver.imbb.forth.gr/teaching502.html!
• Current Computer Modeling Cannot Explain Why Two Highly Similar Sequences Fold into Different Structures
• The bacterial model systemTassos Economou
• Review Integrating multiple `omics' analysis for microbial biology: application and methodologies
• BIO1502/1403 Proteins in the cell
• BIO1502/1403 Proteins in the cell
• JOURNAL OF BACTERIOLOGY, Oct. 2011, p. 55145519 Vol. 193, No. 19 0021-9193/11/$12.00 doi:10.1128/JB.05235-11
• Modern analytical ultracentrifugation in protein science: A tutorial review
• Experimental Approaches to ProteinProtein Interactions 901 Insight into proteinprotein interactions from
• Published: October 24, 2011 r 2011 American Chemical Society 5482 dx.doi.org/10.1021/nl2032876 |Nano Lett. 2011, 11, 54825488
• Molecular Cell Structural Instability Tuning as a Regulatory
• 17852 Phys. Chem. Chem. Phys., 2011, 13, 1785217863 This journal is c the Owner Societies 2011 Cite this: Phys. Chem. Chem. Phys., 2011, 13, 1785217863
• Determination of protein complex stoichiometry through multisignal sedimentation velocity experiments
• Member Organisation Forum European Peer Review Guide