- How To Make Your Own Kinemages Kinemage-Construction Tutorial -Ricin
- Structural Biochemistry I Course director: Lorena S. Beese
- proteinsSTRUCTURE O FUNCTION O BIOINFORMATICS CASP8 TARGET CLASSIFICATION
- research papers 12 doi:10.1107/S0907444909042073 Acta Cryst. (2010). D66, 1221
- Nucleic Acids Research, 2007, Vol. 35, Web Server issue W375W383 doi:10.1093/nar/gkm216
- Structural Biochemistry I General Info: Fall 2008 (version 080825)
- Study the kinemages in this file, following along on this worksheet and answering its questions. Use chapter 1 of the Branden & Tooze textbook for background. Practice dragging back & forth slowly
- Your Contact Info Please give us your full name
- BCH222 -The Ribosome Unless you are already familiar with nucleic acid structure, read chapter 7 in Branden & Tooze, and refer to
- The Complete Atomic Structure of the Large Ribosomal Subunit
- BCH222 2011 Suggestions for data-mining projects Ramachandran-plot related
- BCH222
- Editing kinemages with KiNG 28th February 2003
- Hydrogen bonds are crucial to understanding helices, and H-bonds and helices are important to understanding and analyzing both individual structures and data compilations such as
- BCH222
- BCH222
- Structural Biochemistry I General Info: Fall 2009
- Structural Biochemistry I General Info: Fall 2010
- Structural BiochemiStry i: Structure of macromoleculeS
- Instructions for Individual Projects in Kinemage form
- Proc. Natl. Acad. Sci. USA Vol. 96, pp. 400405, January 1999
- Asparagine and Glutamine: Using Hydrogen Atom Contacts in the Choice of Side-chain
- Exploring steric constraints on protein mutations using MAGE0PROBE
- Natural -sheet proteins use negative design to avoid edge-to-edge aggregation
- RNA backbone is rotameric Laura J. W. Murray, W. Bryan Arendall III, David C. Richardson, and Jane S. Richardson*
- [18] improving structures using all-atom contacts 385 The methodology of macromolecular crystallography is mature, powerful,
- MOLPROBITY: structure validation and all-atom contact analysis for nucleic acids and their complexes
- RNA Structure and Function 485 RNA backbone rotamers finding your way in
- doi:10.1261/rna.2343206 published online Feb 16, 2006;RNA
- The RNA Ontology Consortium: An Open Invitation to the RNA Community Authors: Neocles B. Leontis,+1
- RNA BACKBONE ROTAMERS AND CHIROPRAXIS Laura Weston Murray
- J. Math. Biol. (2008) 56:253278 DOI 10.1007/s00285-007-0082-x Mathematical Biology
- Available online at www.sciencedirect.com Recent developments in phasing and structure refinement for
- "The other 90% of the protein: Assessment beyond the C s for CASP8 template-based and high-accuracy models"
- Name # % alpha beta other 1 1 2 2 3 3 4 4 1 2 3 4 x1 x2 x3 x4 act. com. act. com. act. com. act. com. range range range range 1/2width 1/2width 1/2width 1/2width
- Quick-Start for using KiNG and kinemages The KiNG kinemage viewer can be used on-line in MolProbity or other web sites, or can be downloaded
- Name # % alpha beta other 1 2 3 4 1 2 3 4 Arginine comm.
- Your Contact Info Please give us your full name
- Go through the kinemages of c6FldFlx.kin for yourself. In kinemage 5, is it the JJ closed or open form of GroEL that contains ATP? __________
- Go through the kinemages of c6FldFlx.kin for yourself. In kinemage 5, is it the closed or open form of GroEL that contains ATP? __________
- Study the kinemages in this file, following along on this worksheet and answering its questions. Use chapter 1 of the Branden & Tooze textbook for background. Practice dragging back & forth slowly
- Study the kinemage in this file, following along on this worksheet and answering its questions. Use chapter 1 of the Branden & Tooze textbook for background.
- Study the kinemage in this file, following along on this worksheet and answering its questions. Use chapter 1 of the Branden & Tooze textbook for background.
- Study the kinemage in this file, following along on this worksheet and answering its questions. Use chapter 1 of the Branden & Tooze textbook for background.
- In this exercise you will use the information from all-atom contacts and sidechain rotamer conformations to explore whether or not a specific mutation can be accommodated without moving the
- The Kinemage File Format, v1.0 Ian W. Davis, Jane S. Richardson, David C. Richardson
- Hacking KiNG This document is intended to provide a field guide to the code for KiNG and its
- The KiNG manual August 29, 2009
- How To Make Your Own Kinemages Kinemage-Construction Tutorial -Ricin
- PDB sf? Reso. Molecule Name 1a2pA Y 1.5 barnase
- These instructions are specific for installation and use of Mage and Prekin in the Macintosh OSX operating system. For that system, the unix programs versions of Mage, Prekin, and Probe are de-
- OSPREY License April 21, 2009
- Profile of Christian R. H. Raetz NA may carry all of the in-
- Medical Need Special Parking Request Instructions Page 1 of 2
- Request for Special Parking/Transportation Consideration Faculty and Staff Form
- You and your family are cordially invited to attend the Computer Science Diploma Ceremony
- Structural Biochemistry I General Information
- York Lectures BLAST/VAST Problem Set
- Assignment for How To Make Your Own Kinemages Graphics Assignment
- 1.25 Resolution Crystal Structures of Human Haemoglobin in the Oxy, Deoxy and
- Teaching Molecular Three-dimensional Literacy* Received for publication, December 19, 2001
- 10.1261/rna.657708Access the most recent version at doi: published online Jan 11, 2008;RNA
- Comparison of a QM/MM Force Field and Molecular Mechanics Force Fields in Simulations of Alanine and
- How To Make Your Own Kinemages Using KiNG and Molikin (v061020)
- Graphics Problem Set # 7 (Beese) Serine Proteinase
- Problem Set Worksheet Serine Proteinase
- Meike Kuschel Analysis of messenger RNA using the
- BCH222 -Using All-Atom Contact Analysis Read the Word et al. (1999) J. Mol. Biol. 285, 1711 paper on the all-atom contact-dot method.
- The Penultimate Rotamer Library Simon C. Lovell, J. Michael Word, Jane S. Richardson, and David C. Richardson*
- Teaching Molecular 3-D Literacy Received for publication, October 5, 2001
- Modeling biological systems using Dynetica a simulator of dynamic networks
- Problem Set Worksheet (Beese) Protein-DNA Interactions
- THE IMPACT OF LOCAL ACCURACY IN PROTEIN AND RNA STRUCTURES
- A quick tour through PREKIN (shown for the PC) Double clicking on the PREKIN icon will open the following dialog box.
- Go through the kinemages of c6FldFlx.kin for yourself. In kinemage 5, is it theJJ closed or open form of GroEL that contains ATP? __________
- BCH222
- Making kinemages of your own 1. (prep.) Download the KiNG program from kinemage.biochem.duke.edu, if you don't already have it.
- Been, Michael Office: Rm 207B, 684-2858
- proteinsSTRUCTURE O FUNCTION O BIOINFORMATICS TEMPLATE BASED ASSESSMENT
- BCH222 -Ramachandran-Plot Data Lovell et al. (2003) Proteins: Struc Funct Genomics 50, 437 on validation around the C
- BCH222
- BCH222 -H-bond Worksheet (use Mage version 6.14 or later)HbondPractice.kin
- Making kinemages of your own 1. (prep.) Download the KiNG program from kinemage.biochem.duke.edu, if you don't already have it.
- BCH 258 Fall 2010 Instructions for Individual Report
- Making kinemages of your own 1. Download the KiNG program from kinemage.biochem.duke.edu, if you don't already have it.
- Ivelin Georgiev and Bruce R. Donald Copyright (C) 2001-2009 Bruce Donald Lab, Duke University
- Making kinemages of your own 1. Download the KiNG program from kinemage.biochem.duke.edu, if you don't already have it.
- Map Fit // Model Building C.I. Branden and J. Tooze (1999) "Chapter 18: Determination of Protein Structures" in
- Structural Biochemistry I General Info: Fall 2009 (version 080823)
- In this exercise you will use the information from all-atom contacts and sidechain rotamer con-formations to explore whether or not a specific mutation can be accommodated without moving the
- BCH222 -Sidechain Rotamer-plot Data Lovell et al. (2000) Proteins: Struc Funct Genomics 40, 389 on the "penultimate library" of
- RNA Backbone: Consensus All-angle Conformers and Modular String Nomenclature
- Structure Validation by C Geometry: , and C Deviation Simon C. Lovell,2
- Structure 14, 265274, February 2006 2006 Elsevier Ltd All rights reserved DOI 10.1016/j.str.2005.10.007 The Backrub Motion: How Protein Backbone
- Graphics Worksheet # 6 (Beese) Protein-DNA Interactions
- H-bond Practice Open the file HbondPractice-KiNG.kin and do the exercises, followinging the instructions for each
- BCH 258 Fall 2009 Instructions for Individual Report
- A new generation of crystallographic validation tools for the Protein Data Randy J. Read1,*
- Construction of Kinemages through the use of PREKIN Copyright 1999, Gary Manfready
- The cis-Pro Touch-Turn: A Rare Motif Preferred at Functional Sites
- KiNG (Kinemage, Next Generation): A versatile interactive molecular and
- Arginine Arginine seq # label Name # % alpha beta other mode comm.
- BCH222 -Greek Key Barrels C.I. Branden and J. Tooze (1999) Introduction to Protein Structure, Second Edition, pp. 77-78 & 335-336 (look at the color
- Initial steps in adding X11 to your MacBook: 1. Locate the DVD that came with your computer labeled something like "MacBook
- ALL-ATOMCONTACTS: ANEWAPPROACHTO
- Copyrightby LOCALMOTIONANDLOCALACCURACY
- Duke LMCF Zeiss LSM 410 Confocal 28-Feb-07 1 Zeiss LSM 410 Confocal
- Kinetic Role of Helix Caps in Protein Folding Is Context-Dependent Gregory T. Kapp, Jane S. Richardson, and Terrence G. Oas*
- Your Contact Info Please give us your full name
- STRUCTURE NOTE Structural Genomics of Pyrococcus furiosus: X-Ray
- The backrub motion: How protein backbone shrugs when a sidechain dances
- Boltzmann-type distribution of side-chain conformation in proteins
- research papers 88 doi:10.1107/S0907444904027325 Acta Cryst. (2005). D61, 8898
- Study the kinemages in this file, following along on this worksheet and answering its questions. Use chapter 1 of the Branden & Tooze textbook for background. Practice dragging back & forth slowly
- BCH222
- A simplified ricin tutorial for kinemage authors From the original tutorial by Jane and David Richardson, Duke University
- In this exercise you will use the information from all-atom contacts and sidechain rotamer con-formations to explore whether or not a specific mutation can be accommodated without moving the
- Tips for Using Reduce & Probe on the command-line This is a brief introduction to off-line use of the programs Reduce (to add and optimize hydrogens) and Probe (to
- Structural Biochemistry I General Info: Fall 2011 Rev 20110829
- Name:_________________________________ Structural Biochemistry I
- H-bond Practice Open the file HbondPractice-KiNG.kin and do the exercises, followinging the instructions for
- People & Ideas JCB VOLUME 195 NUMBER 5 2011706
- D U K E I n s t i t u t e F o r G e n o m e S c i e n c e s & P o l i c y I s s u e 1 8 S e p t e m b e r / O c t o b e r 0 5
- updated 12.06.11 2012 IGSP Summer Fellowship Program
- The new england journal of medicine n engl j med 349;12 www.nejm.org september 18, 20031180
- Chapter One Why Leave Life's Persistent Questions to Guy Noir?
- GENERAL ASSEMBLY OF NORTH CAROLINA SESSION 2009
- D U K E I n s t i t u t e F o r G e n o m e S c i e n c e s & P o l i c y I s s u e 2 O c t o b e r 0 3
- D U K E I n s t i t u t e F o r G e n o m e S c i e n c e s & P o l i c y I s s u e 1 0 S e p t e m b e r 0 4
- IPJInvestigative Practice Journal December 13, 2007
- Perspective The NEW ENGLAND JOURNAL of MEDICINE
- EMBO reports VOL 9 | NO 12 | 2008 2008 EurOpEaN MOLEcuLar BiOLOgy OrgaNizatiON1174 science & society analysis
- D U K E I n s t i t u t e F o r G e n o m e S c i e n c e s & P o l i c y I s s u e 2 7 M a y / J u n e 0 7
- Lamellocytes Plasmatocytes,
- IGSP undertakes extensive internal review to design `IGSP 2.0' When Duke proposed establishing a new campus-wide Institute for Genome Sciences & Policy in 2000, it
- D U K E I n s t i t u t e F o r G e n o m e S c i e n c e s & P o l i c y I s s u e 1 4 F e b r u a r y 0 5
- D U K E I n s t i t u t e F o r G e n o m e S c i e n c e s & P o l i c y I s s u e 1 6 A p r i l 0 5
- www.sciencemag.org SCIENCE VOL 323 30 JANUARY 2009 561 CREDITS:(LEFTTOPANDBOTTOM)AAAS;(RIGHT)ASSOCIATEDPRESS EDITORIAL
- D U K E I n s t i t u t e F o r G e n o m e S c i e n c e s & P o l i c y I s s u e 1 9 N o v e m b e r / D e c e m b e r 0 5
- 2009 Spring Tuesday Seminar Series Sponsored by UPGG and IGSP
- D U K E I n s t i t u t e F o r G e n o m e S c i e n c e s & P o l i c y I s s u e 7 A p r i l 0 4
- D U K E I n s t i t u t e F o r G e n o m e S c i e n c e s & P o l i c y I s s u e 3 N o v e m b e r 0 3
- Debating DNA Collection by Sarah B. Berson
- D U K E I n s t i t u t e F o r G e n o m e S c i e n c e s & P o l i c y I s s u e 1 S e p t e m b e r 0 3
- Leading Edge 210 Cell 141, April 16, 2010 2010 Elsevier Inc.
- D U K E I n s t i t u t e F o r G e n o m e S c i e n c e s & P o l i c y I s s u e 5 F e b r u a r y 0 4
- Extreme Genomics By Scouring the Genomes of 50 HIV-Resistant People, Study
- D U K E I n s t i t u t e F o r G e n o m e S c i e n c e s & P o l i c y I s s u e 1 2 N o v e m b e r / D e c e m b e r 0 4
- SUMMER 2007 ~ 111 Devaluing Science
- D U K E I n s t i t u t e F o r G e n o m e S c i e n c e s & P o l i c y I s s u e 2 3 S e p t e m b e r / O c t o b e r 0 6
- D U K E I n s t i t u t e F o r G e n o m e S c i e n c e s & P o l i c y I s s u e 2 1 M a r c h / A p r i l 0 6
- D U K E I n s t i t u t e F o r G e n o m e S c i e n c e s & P o l i c y I s s u e 9 A u g u s t 0 4
- D U K E I n s t i t u t e F o r G e n o m e S c i e n c e s & P o l i c y I s s u e 2 2 M a y / J u n e 0 6
- October 28. 2009! Informatics Enabled Cancer
- Team Science Reaching Across Disciplines Pays Off with Big Discoveries
- Two to Tango Genomic Studies of Symbioses Reveal the Impact of Life's Most
- D U K E I n s t i t u t e F o r G e n o m e S c i e n c e s & P o l i c y I s s u e 6 M a r c h 0 4
- SIRISTAFFORDGettyImages 60 Scientific American, October 2010
- On the Front Lines Efforts are Underway to Bring Genomic Medicine to a
- D U K E I n s t i t u t e F o r G e n o m e S c i e n c e s & P o l i c y I s s u e 3 0 A p r i l / M a y 0 8
- D U K E I n s t i t u t e F o r G e n o m e S c i e n c e s & P o l i c y I s s u e 2 6 M a r c h / A p r i l 0 7
- PLoS Medicine | www.plosmedicine.org 1735 November 2007 | Volume 4 | Issue 11 | e324 Policy Forum
- D U K E I n s t i t u t e F o r G e n o m e S c i e n c e s & P o l i c y I s s u e 1 5 M a r c h 0 5
- SPRING 2003 ~ 3 he problem of technology--how to spread its fruits, limit its excesses, and
- Nature Reviews | Molecular Cell Biology Differentiation
- D U K E I n s t i t u t e F o r G e n o m e S c i e n c e s & P o l i c y I s s u e 2 0 J a n u a r y / F e b r u a r y 0 6
- 2009-2010 Tuesday Seminar Series Sponsored by UPGG and IGSP
- Genome Medicine 2009, 11
- D U K E I n s t i t u t e F o r G e n o m e S c i e n c e s & P o l i c y I s s u e 1 3 J a n u a r y 0 5
- D U K E I n s t i t u t e F o r G e n o m e S c i e n c e s & P o l i c y I s s u e 2 5 J a n u a r y / F e b r u a r y 0 7
- www.sciencemag.org SCIENCE VOL 323 16 JANUARY 2009 319 FOCUS Astronomical
- SERIES ``GENETICS OF ASTHMA AND COPD IN THE POSTGENOME ERA''
- Duke University Computational Biology & Bioinformatics
- Got the Bug By Harnessing the Genome, Duke Scientists Take Aim
- GINA Prevails After 13 Years, Federal Law Offers Protection against Genetic
- Resolving Individuals Contributing Trace Amounts of DNA to Highly Complex Mixtures Using High-Density
- TABLE OF CONTENTS CBB STUDENT TIMELINE................................................................................................................................................................................. 2
- D U K E I n s t i t u t e F o r G e n o m e S c i e n c e s & P o l i c y I s s u e 1 1 O c t o b e r 0 4
- doi:10.1136/jme.2006.019406 2008;34;202-205J. Med. Ethics
- D U K E I n s t i t u t e F o r G e n o m e S c i e n c e s & P o l i c y I s s u e 4 J a n u a r y 0 4
- IGSP Summer Fellowship Program Duke University
- Exome sequencing: the sweet spot before whole genomes
- Leading Edge Exome Sequencing Deciphers
- NATLHUMANGENOMERES.INST. Personal genomics goes mainstream
- December 21, 1996 Carl Sagan, an Astronomer Who Excelled at
- D U K E I n s t i t u t e F o r G e n o m e S c i e n c e s & P o l i c y I s s u e 2 9 N o v e m b e r / D e c e m b e r 0 7
- D U K E I n s t i t u t e F o r G e n o m e S c i e n c e s & P o l i c y I s s u e 1 7 M a y 0 5
- D U K E I n s t i t u t e F o r G e n o m e S c i e n c e s & P o l i c y I s s u e 8 M a y 0 4
- Small Comfort Long touted as the next "big thing," nanotechnology is already moving from research to
- CURRICULUM VITAE Subhashini Chandrasekharan, PhD
- The Evolution of DNA Databases: Expansion, Familial Search, and the Need for Reform
- Sickle cell testing of athletes stirs discrimination fears By Rob Stein
- Diagnosing Acute Infection Using the Host Response Ephraim L. Tsalik, MD, MHS, PhD
- D U K E I n s t i t u t e F o r G e n o m e S c i e n c e s & P o l i c y I s s u e 2 4 N o v e m b e r / D e c e m b e r 0 6
- D U K E I n s t i t u t e F o r G e n o m e S c i e n c e s & P o l i c y I s s u e 2 8 S e p t e m b e r / O c t o b e r 0 7
- 2008 Tuesday Seminar Series Sponsored by UPGG and IGSP
- DUKEInstituteForGenomeSciences&Policy I N S I D E
- Human Molecular Genetics doi:10.1093/hmg/ddn193
- Ethical, Legal, and Social Issues A New Social Contract
- The Total RNA Story Introduction
- Request Form for Approval for Research Experience (Independent Study) for Genome Sciences & Policy Certificate
- Protein Identification Database Searching
- Agilent Technologies Microarray-Based Gene
- Protocol for PostCapture Sample Processing of SNORAC and AcylRAC Proteomics Samples Duke Proteomics Core Facility
- Updated 11/21/05 RNA Interference: IGSP shRNA Plasmid Libraries Resource for Functional Genomics
- Four-dimensional analysis of vascularization during primary development of an organ, the gonad
- bulletin of Duke University
- Ms. Arti K. Rai, Elvin R. Latty Professor of Law Duke Law School, Duke Institute for Genome Sciences & Policy
- Child Care Subsidy Application Form Eligibility
- Genisphere Technical Support: 877.888.3DNA www.genisphere.com FlashTag HSR Feb2011 Page 1 of 17 RNA Labeling Kit
- 1/28/12 10:04 PMBeta Proteins -Two Important Folds : BCH 222 Worksheet Page 1 of 5http://kinemage.local/teaching/bch222/222BetaWrksht_ab8_and_GkKey.php
- Application for RNAi Screening at the Duke RNAi Facility Applicant Information
- Germ Cell Depletion Does Not Alter the Morphogenesis of the Fetal Testis or Ovary
- Quantitation comparison of total RNA using the Agilent 2100 bioanalyzer, ribo-
- Agilent Technologies Microarray-Based Gene
- Building Better Backbones: Visualizations, Analyses, and Tools for Higher Quality
- TI HE JANUARY 1,1993, issue of Science announced that Francis S. J L Collins of the University of Michigan had agreed to direct the
- UPGG Student Seminars http://upg.duke.edu/GenStuSem.html 1 of 2 8/17/2005 9:10 PM
- BIO 187 / UPGEN 287 -EVOLUTIONARY GENETICS 2011, Physics 130, TuTh 2:50 -4:05pm
- ESTIMATING VARIABLE STRUCTURE IN MULTI-TASK LEARNING Estimating variable structure and dependence in Multi-task learning
- C h a p t e r Genetics of Common Disorders with
- Beginning immediately, the IGSP Genome Sequencing & Analysis is pleased to offer web-based Sanger ordering and data delivery for our
- Service Description Duke Price Input source Start amount
- Introduction Since their discovery in 1993, small non-coding RNAs
- Alexander Rosenberg The R. Taylor Cole Professor of Philosophy
- Quantitative Proteomics Isotope Coding Proteomics
- Optimizing RNA extraction yield from whole blood for microarray gene expression analysis
- Pro~l. Biophy.x molec. Biol., Vol. 42, pp, 95 I33, 1983. (XI79 6107 83 $0.00+ 50 Printed in Great Britain. All rights reserxed ('opxright i 1983 Pergamon Press Lid
- CURRICULUM VITAE LAURA MARI BESKOW
- SCIENCE, POLITICS. AND THE HUMAN GENOM
- Directions for in-gel tryptic digestions of coomassie-stained 1D Bands and 2D Spots. NOTE: Although nearly any SDS-PAGE system can be utilized upstream of an LC-MS analysis, the DPCF
- Agilent Technologies Oligonucleotide
- PARTICIPATING FACULTY Alek Aksimentiev
- NO Computer Work while instrument is in use. Multitasking will cause the current run to crash, and all data will Please NO FLASH DRIVES.
- COGEDE-557; NO OF PAGES 7 Please cite this article in press as: Barske LA, Capel B. Blurring the edges in vertebrate sex determination, Curr Opin Genet Dev (2009), doi:10.1016/j.gde.2008.11.004
- Fibroblast growth factor receptor 2 regulates proliferation and Sertoli differentiation
- Instructions for Scanner Reservations In order to access the system you must have an IGSP net ID. If you do not have an IGSP net ID, go to
- Fgf9 and Wnt4 Act as Antagonistic Signals to Regulate Mammalian Sex Determination
- Interaction Proteomics Recommended Resins for enrichment of proteins with commonly incorporated tags, and their binding partners
- Mini Handbook RNeasy Mini Kit
- Instructions for creating an online submission form: 1. http://osforms.genome.duke.edu/
- Fundamentals of Protein Chemistry Amino Acid and Peptide Chemistry
- Preparation of SILAC Media: Arg and Lysfree Media: DMEM, RPMI1640, Phenol redfree MEM and 1:1 DMEM:F12 are available from Pierce. SILAC
- The SupportStructure The Odd Legacy of
- IGSP undertakes extensive internal review to design `IGSP 2.0' When Duke proposed establishing a new campus-wide Institute for Genome Sciences & Policy in 2000, it
- Meike Kuschel Analysis of messenger RNA using the
- Alexander Rosenberg Bibliography
- Ion Sources and Mass Analyzers in Protein Characterization
- Agilent Technologies, Inc. 3500 Deer Creek Road
- Half-hairpin Array hybridization (July 2011) This protocol is used for the MSCV-driven shRNA retroviral library developed by
- Directions for in-gel tryptic digestions of coomassie-stained 1D Bands and 2D Spots. NOTE: Although nearly any SDS-PAGE system can be utilized upstream of an LC-MS analysis, the DPCF
- NMR Structure Improvement: A Structural Bioinformatics & Visualization Approach. Jeremy N. Block
- Ivelin Georgiev, Kyle E. Roberts, Pablo Gainza, and Bruce R. Donald Copyright (C) 2001-2012 Bruce Donald Lab, Duke University
- Genome Gone Global First Stirrings Abroad
- Instructions for Scanner Reservations In order to access the system you must have an IGSP net ID. If you do not have an IGSP net ID,
- The UPGG Genetic and Genomic Solutions to Biological Problems (referred to usually as "Solutions") offers 18 focus areas covering a wealth of genetics and genomics areas,
- Pathway Analysis of Proteins with Disregulated Expression in Colonies from "Spacecraft Survivors" Relative to Ground Based Control
- TRANSLATIONAL PHYSIOLOGY Whole blood and leukocyte RNA isolation for gene expression analyses
- Archival Version including Appendicies: Experiments in Stochastic Computation for
- SCIENCE, POLITICS. AND THE HUMAN GENOM
- Math 49S.01 Applications of Mathematics to Physiology and Medicine MWF: 1:30-2:20pm.
- Instructions for Software Reservations In order to access the system you must have an IGSP net ID. If you do not have an IGSP net ID, go to
- Modeling biological systems using Dynetica a simulator of dynamic networks
- Origins ofthe Genome Project Putting Santa Cruz on
- Dear IGSP Colleagues: It has been almost two years since the first news reports began questioning the work done by Anil Potti,
- RNA Integrity Number (RIN) Standardization of RNA Quality Control
- Been, Michael Office: Rm 207B, 684-2858
- PROTEINS: Structure, Function, and Genetics 5139-148 (1989) Structural Principles of a/p Barrel Proteins
- N E W S A N D V I E W S NATURE GENETICS | VOLUME 38 | NUMBER 11 | NOVEMBER 2006 1233
- BAX-mediated cell death affects early germ cell loss and incidence of testicular teratomas in Dnd1Ter/Ter
- REQUESTS FOR INDEPENDENT STUDY Trinity College of Arts & Sciences
- Mitochondrial Purification via Percoll Gradient from Adherent Cells Grown In Culture Base Reference: Kristian et al, J. Neurosc. Methods 152:136143 (2006)
- Culture conditions for individual plasmid preparations (Adapted from Open Biosystems).
- Bio307 "Graduate School 101" Bio308 "Succeeding Beyond Grad School"
- REQUESTS FOR INDEPENDENT STUDY Trinity College of Arts & Sciences
- Basics of Protein Identification GENE PRODUCT I.D.
- Structures of the Bacterial Ribosome in Classical and Hybrid States of
- Automated Quantitative Phosphopeptide Enrichment using Titania-packed Capillary Columns and Its Application to Human Tissues for Label-Free Phosphoproteomics
- UPGEN 301: Advanced Topics in Genetics and Genomics Fall 2011 Wednesdays from 4:30 to 6:00 PM in GSRB I 4002 (dinner will be served)
- A F F Y M E T R I X P R O D U C T FA M I LY > R N A A R R AYS A N D R E A G E N T S >
- 2007 Springer Science Business Media, Inc., Volume 29, Number 2, 2007 1 Parquet Tilings
- MEMORANDUM --Secure System Usage TO: All account holders on computers belonging to IGSP
- Tissue Homogenization and RNA + Protein Extraction using TRIzol reagent Protocol Specified on the basis of Human Heart Preparation and Lung Tissue Preparation.
- Mass SpectrometryAppropriate Protocol for Cell Lysis using Probe Sonication. Will Thompson, Duke Proteomics Core Facility
- Introduction to Proteomics Black Swallowtail -larvae and butterfly
- 3745RESEARCH ARTICLE INTRODUCTION
- INTRODUCTION Data-Independent Analysis (DIA or MSE) has shown distinct promise for improving the
- Last updated 13 Sept 2011 Curriculum Vitae
- Multiscale factor models for molecular networks Justin Guinney1,2
- Statistical Science 2005, Vol. 20, No. 4, 388400
- BCH222 -Using All-Atom Contact Analysis Read the Word et al. (1999) J. Mol. Biol. 285, 1711 paper on the all-atom contact-dot method.
- Sequential Monte Carlo in Model Comparison: Example in Cellular Dynamics in Systems Biology
- Peritubular Myoid Cells Are Not the Migrating Population Required for Testis Cord Formation in the XY Gonad
- Expression and functional analysis of Gm114, a putative mammalian ortholog of Drosophila bam
- Duke RNAi Core: Human shRNA Clone Requests To request clones from the Human shRNA library, please identify the relevant clones, then request through the
- Dynetica User's Guide (version 1.2beta) Peter Blais and Lingchong You
