Lovley, Derek - Department of Microbiology, University of Massachusetts at Amherst

• MICROBIOLOGICAL REVIEWS, June 1991, p. 259-287 Vol. 55, No. 2 0146-0749/91/020259-29$02.00/0
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• RESEARCH ARTICLE Open Access Constraint-based modeling analysis of the
• International Journal of Systematic Bacteriology (1999), 49, 16151622 Printed in Great Britain Geothrix fermentans gen. nov., sp. nov., a
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• by Francis H. Chapelleaand Derek R. Lovley The Middendorf aquife{,of South Carolina exhibits a 4O-kilometer-wide zone where dissolved ferrous iron concentra-
• Published in Envrionmental Science & Technology, November 1992,pp. 2228-2234,by the American Chemical Society Derek R..Lovley. and Elizabeth J. P. Phillips
• Apph.d G.och.mislry. Vol 6. pp (l47~; Prinled in Greal Britain
• Bioremediation of metal contamination Derek R Lovley* and John 0 Coatest
• Technical Notes GSEL Version 2, an Online Genome-Wide Query System
• Specific localization of the c-type cytochrome OmcZ at the anode surface in current-producing biofilms of
• 2002 Blackwell Science Ltd Reduction of Fe(III) oxide by methanogens in the
• "The disintegration of organic compounds by microorganisms is accompanied by the liberation of
• APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 0099-2240/01/$04.00 0 DOI: 10.1128/AEM.67.7.32753279.2001
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• Environ. Sci. Techno/. 1997. 31, 2873-2877 PracticalConsiderationsfor
• This article appeared in a journal published by Elsevier. The attached copy is furnished to the author for internal non-commercial research
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• DEEP SUBSURFACE MICROBIAL PROCESSES Derek R. Lovley
• ,~ t:...rll. un': "1.Jn..'url~'.J(""((" I"."("rs. 9~ (1990) 14-22 EI",,' ,," 5.:,.:n.:.: Puhh"ho:r, Ii V Am".:rd"nI -Prin..:d In Tho: Nclhcrland,
• APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 0099-2240/98/$04.00 0
• JOURNAL OF BACTERIOLOGY, Dec. 2006, p. 84698478 Vol. 188, No. 24 0021-9193/06/$08.00 0 doi:10.1128/JB.01278-06
• Abstract Studies on the microorganisms living in hydro-carbon-contaminated sediments in San Diego Bay, Cali-
• Abstract A newly discovered arsenate-reducing bac-terium, strain OREX-4, differed significantly from strains
• Genome-scale modelling of microbial metabolism has proved to be a powerful tool for representing the basic
• APPLIED AND ENVIRONMENTAL MICROBIOLOGY, July 2005, p. 38583865 Vol. 71, No. 7 0099-2240/05/$08.00 0 doi:10.1128/AEM.71.7.38583865.2005
• Journal of Applied Statistics Vol. 36, No. 10, October 2009, 10671085
• PHYSIOLOGICALECOLOGY Dissimilatory Reduction of Iron and Uranium
• APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Apr. 1986, p. 683-689 0099-2240/86/040683-07$02.00/0
• 24 AUGUST 2001 VOL 293 SCIENCE www.sciencemag.org1444 above is the uncertainty in the amount of
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• G"",'himica elCo.,m",'him;caAclaVol. 52.pp. 2993-3003 Copyrighte 1988PergamonPt= pic. Printed inU.S.A.
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• Use of Dissolved H2 Concentrations To Determine Distribution of Microbially Catalyzed Redox Reactions in Anoxic Groundwater
• This article was published in an Elsevier journal. The attached copy is furnished to the author for non-commercial research and
• Robelt T.Anderson1 and Derek R. Lovley2* 1University of Massachusetts, Department of Civil and Environmental Engineering, Amherst, MA 01003;
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• Environmental Microbiology (2005) 7(5), 641648 doi:10.1111/j.1462-2920.2005.00731.x 2005 Society for Applied Microbiology and Blackwell Publishing Ltd
• Biochem. J. (2003) 369, 153161 (Printed in Great Britain) 153 Biochemical and genetic characterization of PpcA, a periplasmic c-type
• Microorganisms have important roles in the biogeochemical cycling of toxic metals and radionuclides. Recent advances
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• Development of a biomarker for Geobacter activity and strain composition; Proteogenomic analysis of the
• Environmental Microbiology (1999) 1(1), 89-98 DerekR. Lovley,'* Jocelyn L Fraga,' JohnD. Coates2
• APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Mar. 2003, p. 15481555 Vol. 69, No. 3 0099-2240/03/$08.00 0 DOI: 10.1128/AEM.69.3.15481555.2003
• APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Mar. 1995, p. 953958 Vol. 61, No. 3 0099-2240/95/$04.00 0
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• Modeling and sensitivity analysis of electron capacitance for Geobacter in sedimentary environments
• APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 0099-2240/98/$04.00 0
• Influence of Heterogeneous Ammonium Availability on Bacterial
• Environmental Microbiology (2001) 3(4), 281287 Anaerobic degradation of aromatic compounds coupled
• RESEARCH Open Access Metabolic response of Geobacter sulfurreducens
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• Rock and the Role of Microbiology --Lovley 280 (5360): 54 --Science http://www.sciencemag.org/cgi/content/full/280/5360/54b?maxtoshow... 1 of 3 2/19/2008 1:18 PM
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• Vol. 56, No. 6APPLIED AND ENVIRONMENTAL MICROBIOLOGY, June 1990, p. 1858-1864 0099-2240/90/061858-07$02.00/0
• Energies 2010, 3, 899-919; doi:10.3390/en3050899 ISSN 1996-1073
• Genome-wide gene regulation of biosynthesis and energy generation by a novel transcriptional
• Environmental Microbiology (2004) 6(6), 596604 doi:10.1111/j.1462-2920.2004.00593.x 2004 Blackwell Publishing Ltd
• International Journal of Systematic and Evolutionary Microbiology (2002), 52, 719728 DOI: 10.1099/ijs.0.01953-0 Geoglobus ahangari gen. nov., sp. nov., a novel
• O,omlctobiology JOIUI\Q/. Volume 6. pp. 145-155 Printedj" theUK.All .ilhlJ""M/ed.
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• Electrode-Based Approach for Monitoring In Situ Microbial Activity
• APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Apr. 2010, p. 23712375 Vol. 76, No. 7 0099-2240/10/$12.00 doi:10.1128/AEM.02250-09
• Geobacter pickeringii sp. nov., Geobacter argillaceus sp. nov. and Pelosinus fermentans
• Hydrogeology Journal (2000) 8 : 7788 Springer-Verlag Influence of dissimilatory metal reduction on fate of organic
• Rhodoferax ferrireducens sp. nov., a psychrotolerant, facultatively anaerobic bacterium
• JOURNAL OF BACTERIOLOGY, July 2005, p. 45054513 Vol. 187, No. 13 0021-9193/05/$08.00 0 doi:10.1128/JB.187.13.45054513.2005
• Geomicrobiology Journal, 19:103120, 2002 Copyright C 2002 Taylor & Francis
• ~s:~~"-"'-~0'"-~..-~'"c
• Journalof IndustrialMicrobiology,119951114,85-9 1995SocietyforIndu;;tnalM,uo,'Jloloy :J1694l46!~
• MICROBIOLOGY ELSEVIER FEMS Microbiology Revlcws 20 (1997) 30S-313
• The structure of the core region of the lipopolysaccharide from Geobacter sulfurreducens
• 10.1101/gr.107540.110Access the most recent version at doi: 2010 20: 1304-1311 originally published online June 30, 2010Genome Res.
• APPLIED AND ENVIRONMENTAL MICROBIOLOGY, JUlY 1994, p. 2394-2399 Vol. 60, No. 7 0099-2240/94/$04.00+0
• Biochemical characterization of purified OmcS, a c-type cytochrome required for insoluble Fe(III) reduction in Geobacter sulfurreducens
• Application of cyclic voltammetry to investigate enhanced catalytic current generation by biofilm-modified anodes of Geobacter sulfurreducens strain
• Gene expression and deletion analysis of mechanisms for electron transfer from electrodes to Geobacter sulfurreducens
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• COBIOT-854; NO. OF PAGES 8 Please cite this article in press as: Lovley DR, Nevin KP. A shift in the current: New applications and concepts for microbe-electrode electron exchange, Curr Opin Biotechnol (2011), doi:10.1016/
• Original Article Genome Diversity of the TetR Family of Transcriptional
• Analysis of Biostimulated Microbial Communities from Two Field
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• A c-type cytochrome and a transcriptional regulator responsible for enhanced extracellular electron
• Interference with histidyl-tRNA synthetase by a CRISPR spacer sequence as a factor in the evolution of Pelobacter carbinolicus
• Gene expression and deletion analysis of mechanisms for electron transfer from electrodes to Geobacter sulfurreducens
• R E S E A R C H L E T T E R Production of pilus-like laments in Geobacter sulfurreducens in
• future science group 589ISSN 1759-726910.4155/BFS.10.25 2010 Future Science Ltd Department of Microbiology, University of Massachusetts, Amherst, MA 01003, USA
• R E S E A R C H A R T I C L E Expression ofacetate permease-like (apl) genes in subsurface
• doi:10.1128/AEM.00027-10. 76(12):3999-4007.
• doi:10.1128/AEM.00023-10. Microbiol. 76(12):4080-4084.
• Stimulating the anaerobic degradation of aromatic hydrocarbons in contaminated sediments by providing
• ORIGINAL ARTICLE Molecular analysis of phosphate
• has generated a two-class distinction of sub-fields of microbiology. Sadly, ecology has been largely relegated to
• Diversity of promoter elements in a Geobacter sulfurreducens mutant adapted to disruption in electron transfer
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• OMICS A Journal of Integrative Biology Volume 12, Number 1, 2008
• The Degree of Redundancy in Metabolic Genes Is Linked to Mode of Metabolism
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• Highly conserved genes in Geobacter species with expression patterns indicative of acetate limitation
• Geobacter sulfurreducens strain engineered for increased rates of respiration Mounir Izallalen a,, Radhakrishnan Mahadevan b
• Power output and columbic efficiencies from biofilms of Geobacter sulfurreducens comparable to mixed
• Insights into genes involved in electricity generation in Geobacter sulfurreducens via whole genome microarray analysis of the OmcF-de cient mutant
• Genome Regions Involved in Multiple Regulatory Pathways Identified Using GSEL, a Genome-Wide Database of Regulatory Sequence Elements of
• Edited by J. Wall et.1. 2008 ASM Press, Washington, DC
• Genes for two multicopper proteins required for Fe(III) oxide reduction in Geobacter sulfurreducens
• ORIGINAL ARTICLE Quantifying Expression of a Dissimilatory (bi)Sulfite
• Computational and Experimental Analysis of Redundancy in the Central Metabolism
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• Fluorescent properties of c-type cytochromes reveal their potential role as an extracytoplasmic electron
• R E S E A R C H L E T T E R Growth with high planktonic biomass in Shewanella oneidensis
• REPRINTwww.proteomics-journal.com Bioinformatics
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• Prolixibacter bellariivorans gen. nov., sp. nov., a sugar-fermenting, psychrotolerant anaerobe of
• ORIGINAL PAPER Genome-wide expression profiling in Geobacter
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• A putative multicopper protein secreted by an atypical type II secretion system involved in the
• Microbial Energizers: Fuel Cells That Keep on Going
• 46 the scientist July 2006 lectricigens, the microbes that can completely
• Microbial fuel cells: novel microbial physiologies and engineering approaches
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• Biosensors and Bioelectronics 21 (2006) 20582063 Harvesting energy from the marine sedimentwater interface II
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• RESEARCH ARTICLE Differential protein expression in the metal-reducing
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• Microbial Incorporation of 13C-Labeled Acetate at the Field
• Remediation and Recovery of Uranium from Contaminated
• Fe-CYCLE BACTERIA FROM INDUSTRIAL CLAYS MINED IN GEORGIA, USA EVGENYA S. SHELOBOLINA
• APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Oct. 2005, p. 63086318 Vol. 71, No. 10 0099-2240/05/$08.00 0 doi:10.1128/AEM.71.10.63086318.2005
• Environmental Microbiology (2005) 7(4), 472485 doi:10.1111/j.1462-2920.2005.00803.x 2005 Society for Applied Microbiology and Blackwell Publishing Ltd
• Geobacter bemidjiensis sp. nov. and Geobacter psychrophilus sp. nov., two novel Fe(III)-reducing
• Regulation of two highly similar genes, omcB and omcC, in a 10 kb chromosomal duplication in
• APPLIED AND ENVIRONMENTAL MICROBIOLOGY, May 2005, p. 25302538 Vol. 71, No. 5 0099-2240/05/$08.00 0 doi:10.1128/AEM.71.5.25302538.2005
• APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Apr. 2005, p. 21862189 Vol. 71, No. 4 0099-2240/05/$08.00 0 doi:10.1128/AEM.71.4.21862189.2005
• The hydrogenases of Geobacter sulfurreducens: a comparative genomic perspective
• Comparison of 16S rRNA, nifD, recA, gyrB, rpoB and fusA genes within the family Geobacteraceae
• APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Dec. 2004, p. 75587560 Vol. 70, No. 12 0099-2240/04/$08.00 0 DOI: 10.1128/AEM.70.12.75587560.2004
• a novel group of archaea, extending the upper temperature limit of life to 113 8C. Extremophiles 1, 1421
• -n __n---_n_----------n--_n -Dissimilatory Fe(lII)and Mn(lV) Reduction
• Journal of Theoretical Biology 230 (2004) 133144 Computational prediction of conserved operons and phylogenetic
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• Extending the Upper Temperature Limit for Life
• Diversity of Geobacteraceae Species Inhabiting Metal-Polluted Freshwater Lake Sediments Ascertained by 16S rDNA Analyses
• 19. DeMartino, G. N. et al. Identification, purification, and characterization of a PA700-dependent activator of the proteasome. J. Biol. Chem. 271, 31123118 (1996).
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• INTERACfIONS OF MICROORGANISMSwrrn RADIONUCLIDES MirandaJ. Keith-RoachandFrancisR. Livens(Editors)
• Fulvic Acid Oxidation State Detection Using Fluorescence
• Anaerobic, Sulfate-Dependent Degradation of Polycyclic Aromatic
• APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 0099-2240/01/$04.00 0 DOI: 10.1128/AEM.67.2.10201022.2001
• Dissimilatory Fe(III)-and Mn(IV)-Reducing Prokaryotes
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• Hydrogen Chemistry of Basalt Aquifers --Treiman et al. 282 (5397): 21... http://www.sciencemag.org/cgi/content/full/282/5397/2194e?maxtosh... 1 of 2 2/19/2008 1:26 PM
• Anaerobic Benzene Oxidation in the Fe(III) Reduction Zone of
• Enhanced Anaerobic Benzene Degradation with the Addition of Sulfate
• "'\//l/f'rn/lr (IP48) 4, 277-282 Artic No an980172
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• Evidence Against Hydrogen-Based Microbial
• Nature Macmillan Publishers Ltd 1998 (150 K) and radius of the plume (200 km) should be regarded as
• BIODIVERSITYAMONGmE EXTREMOPHILESAND ANAEROBICPROCESS Diversity of Electron Donors and Acceptors Utilized by
• MICROBIAL REDUCTION OF IODATE TERRY B. COUNCELL1
• Potential for anaerobic bioremediation of BTEX in petroleum-contaminated aquifers
• Reprinted from ISOTOPE GEOSCIENCE
• Anaerobic Hydrocarbon Degradation in
• APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Jan. 1996, p. 288291 Vol. 62, No. 1 0099-2240/96/$04.00 0
• Hydrogen-Based Microbial Ecosystems in the Earth
• Abstract A new, phylogenetically distinct, dissimilatory, Fe(III)-reducing bacterium was isolated from surface sed-
• DerekR. Lovley Water ResourcesDivision
• Remediation of uranium contaminated soils with bicarbonate extraction and microbial U(VI) reduction
• Annu.Rev. Microbiol.1993.47:263-90 DISSIMILATORY METAL
• Geomiceobiology loueno/, Volume II. pp Printed in the UK All right, reserved
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• Arch Microbiol (1993)159:336-344 Archives 01
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• ---PubliRh~d in Envrionmentlll Science & T~chnology, June 1991, pp. 1062-1067, by th~ American Ch~micaJ 8ocj~ty Enzymatic versus Nonenzymatic Mechanisms for Fe( I
• MAGNETITE FORMATION DURING MICROBIAL DISSIMILATORY IRON Derek R. Lovley
• GEOPHYSICALRESEARCHLETTERS,VOL. 16, NO.1, PAGES665-668, JULY 1989 A COMPARISON OF MAGNETITE PARTICLES PRODUCED ANAEROBICALLY BY MAGNETOTACTIC
• Vol. 55, No. 12 Requirement for a Microbial Consortium To Completely Oxidize
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• """"""I(JI.jUI'\"g'j'll~lI;(,11 SnulhScKoeltd. M.d",," "" '.1711IISA EIII..\III fll J P PHil 1.1'" .\'.11> OI:R,K R
• Geochimica et Cosmochimica Acta Vol. 50, lIP. 11-18 @ Pergamon Pr= Ltd. 1986. Printed in U.S.A. 0016-7037{861$3.00+ .00
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• 2/25/11 7:06 PMEureka!: The molecular mousetrap inside us all | GazetteNET Page 1 of 3http://www.gazettenet.com/2011/02/25/molecular-mousetrap-inside-us-all
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• International Journal of Systematic Bacteriology (1999), 49, 11771180 Printed in Great Britain Sulfurospirillum barnesii sp. nov. and
• Biodegradation 11: 107116, 2000. 2001 Kluwer Academic Publishers. Printed in the Netherlands.
• JOURNAL OF BACTERIOLOGY, May 2004, p. 30223028 Vol. 186, No. 10 0021-9193/04/$08.00 0 DOI: 10.1128/JB.186.10.30223028.2004
• reviews-Rt'prinll'd frtJm T r...nd~ in Ecnlo~y and l V..lulion -lItll'-JIJ'JJ '-'"I. .\'. ,V". fI Within tht last dtcadt, a novel form of
• Cyclic voltammetry of biofilms of wild type and mutant Geobacter sulfurreducens on fuel cell anodes indicates possible roles of OmcB,
• Electricity Generation by Geobacter sulfurreducens Attached to Gold Hanno Richter,*, Kevin McCarthy,*, Kelly P. Nevin, Jessica P. Johnson,
• BioMed Central Page 1 of 15
• APPLIED AND ENVIRONMENTAL MICROBIOLOGY, May 2004, p. 29592965 Vol. 70, No. 5 0099-2240/04/$08.00 0 DOI: 10.1128/AEM.70.5.29592965.2004
• JOURNAL OF BACTERIOLOGY, Mar. 2007, p. 21252127 Vol. 189, No. 5 0021-9193/07/$08.00 0 doi:10.1128/JB.01284-06
• APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Nov. 1987, p. 2636-2641 Vol. 53, No. 11 0099-2240/87/112636-06$02.00/0
• Published in Environmental Science & Technology, May 1992,pp. 925-929, by the American Chemical Society Consurnption of Freons CFC-11 and CFC-12 by Anaerobic Sediments and
• Humic Substances as a Mediator for Microbially Catalyzed Metal Reduction
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