Nowak, Martin A. - Department of Organismic and Evolutionary Biology, Harvard University

• Dynamics of cytotoxic T-lymphocyte exhaustion Dominik Wodarz1
• Immune responses against multiple epitopes: a theory for immunodominance and antigenic variation
• Journal of Theoretical Biology 250 (2008) 723731 Repeated games and direct reciprocity under active linking
• Mathematical models of HIV pathogenesis and treatment
• Five Rules for the Evolution of Cooperation
• JOURNAL OF VIROLOGY, 0022-538X/01/$04.00 0 DOI: 10.1128/JVI.75.21.1018710199.2001
• Theory in Biology available light
• J. theor. Biol. (1998) 191, 451462 00225193/98/080451 + 12 $25.00/0/jt970617 7 1998 Academic Press Limited
• Bulletin of Mathematical Biology (2008) DOI 10.1007/s11538-008-9305-6
• Evolutionary dynamics in structured populations
• J. theor. Biol. (1997) 185, 1529 00225193/97/050015 + 15 $25.00/0/jt960253 7 1997 Academic Press Limited
• eading evolutionary theorist Martin Nowak sees cooperation as the master
• Spatial dynamics of ecological public goods Joe Yuichiro Wakanoa
• Z. Phys. Chem. 216 (2002) 520 by Oldenbourg Wissenschaftsverlag, Mnchen
• Journal of Theoretical Biology 237 (2005) 355362 Mutation in evolutionary games can increase average
• 3. Kleckner, N. W. & Dingledine, R. Requirement for glycine in activation of NMDA-receptors expressed in Xenopus oocytes. Science 241, 835837 (1988).
• Journal of Theoretical Biology 249 (2007) 617623 The fastest evolutionary trajectory
• Effect of Stalling after Mismatches on the Error Catastrophe in Nonenzymatic Nucleic Acid Replication
• Evolutionary cycles of cooperation and defection Lorens A. Imhof*
• The effect of different immune responses on the evolution of virulent CXCR4-tropic HIV
• Game-Dpamicai Aspects of the Prisoner's Dilemma Martin Nowak
• he interplay between the human immunodeciency virus (HIV)
• Proc. Natl. Acad. Sci. USA Vol. 93, pp. 985989, February 1996
• Proc. Natl. Acad. Sci. USA Vol. 93, pp. 72477251, July 1996
• Proc. Natl. Acad. Sci. USA Vol. 93, pp. 43984402, April 1996
• Proc. Natl. Acad. Sci. USA Vol. 93, pp. 65426546, June 1996
• J. theor. Biol. (1997) 185, 281293 00225193/97/070281 + 13 $25.00/0/jt9600326 7 1997 Academic Press Limited
• Nature Macmillan Publishers Ltd 1997 Received 20 March; accepted 24 April 1997.
• 1302 NATURE MEDICINE VOLUME 4 NUMBER 11 NOVEMBER 1998 The therapies now approved for human immunodeficiency
• A R T I C L E S I N T E G R A T I V E B I O L O G Y 3 A R T I C L E S
• 1545 J. Exp. Med. The Rockefeller University Press 0022-1007/99/05/1545/10 $2.00 Volume 189, Number 10, May 17, 1999 15451554
• seminars in CELL & DEVELOPMENTAL BIOLOGY, Vol 10, 1999: pp. 555 559 Article No. scdb.1999.0337, available online at http:rrwww.idealibrary.com on
• An error limit for the evolution of language Martin A. Nowak1*
• 1999 Macmillan Magazines Ltd virus is a natural-born cheat that
• Evolutionary game Karl Sigmund* and
• JOURNAL OF VIROLOGY, 0022-538X/99/$04.00 0
• Evolutionary biology of language Martin A. Nowak
• J. theor. Biol. (2000) 204, 179}189 doi:10.1006/jtbi.2000.1085, available online at http://www.idealibrary.com on
• Fairness Versus Reason in the Ultimatum Game
• Section: SCIENCE'S COMPASS PERSPECTIVES: SOCIAL SCIENCE
• *Author to whom correspondence should be addressed. J. theor. Biol. (2000) 209, 173}179
• The spatial ultimatum game Karen M. Page1*
• Digital Object Identifier (DOI): 10.1007/s002850000042
• Correlates of cytotoxic T-lymphocyte-mediated virus control: implications for immuno-
• J. theor. Biol. (2001) 209, 43}59 doi:10.1006/jtbi.2000.2240, available online at http://www.idealibrary.com on
• Available online at http://www.idealibrary.com on doi:10.1006/bulm.2000.0222
• galaxy groups. This is not easy, because their X-ray emission is weaker than that of large
• Available online at http://www.idealibrary.com on doi:10.1006/bulm.2002.0321
• J. theor. Biol. (2003) 221, 445457 doi:10.1006/jtbi.2003.3199, available online at http://www.idealibrary.com on
• Journal of Theoretical Biology 224 (2003) 241247 Mutation landscapes
• TheJournalofExperimentalMedicine J. Exp. Med. The Rockefeller University Press 0022-1007/2004/11/1243/14 $8.00
• Received 2 October 2003 Accepted 10 November 2003
• populations may decrease cooperation and lead to more frequent escalations of conflicts in situations in which cooperation persists in
• 2005 Nature Publishing Group Evolution of indirect reciprocity
• Journal of Theoretical Biology 235 (2005) 393401 Stochastic evolutionary dynamics on two levels
• Theoretical Population Biology 70 (2006) 352363 Evolutionary game dynamics in finite populations with
• Upstream reciprocity and the evolution of gratitude
• PERSPECTIVE doi:10.1111/j.1558-5646.2007.00196.x
• Journal of Theoretical Biology 246 (2007) 522529 Pairwise comparison and selection temperature in
• Comparative lesion sequencing provides insights into tumor evolution
• Generosity: A winner's advice Mathematical models can reveal how prosocial human behaviour --and even social intelligence and
• Cover image: When treated with the herbicide oryzalin, the isotropic growth of Arabidopsis thaliana results in a froth-like cellular structure. In plants, the resistance of the cell wall to
• Calculating Evolutionary Dynamics in Structured Populations
• Accumulation of driver and passenger mutations during tumor progression
• Stochastic evolutionary dynamics of direct reciprocity
• LETTER doi:10.1038/nature09515 Distant metastasis occurs late during the genetic
• 12. Cronin, A. L. A molecular phylogeny and social behaviour of Japenese Ceratina (Hymenoptera, Apidae, Xylocopinae). Insect Syst. Evol. 35, 137146
• EVOLUTIONARY EXPLORING THE EQUATIONS OF LIFE
• 22 DECEMBER 2006 VOL 314 SCIENCE www.sciencemag.org1878 CREDIT:DAVEBARTRUFF/CORBIS
• SCIENCE'S COMPASS thetransformationof propagulesfrominert
• The pace of evolution across fitness valleys Chaitanya S. Gokhale a,, Yoh Iwasa b
• t is not surprising that games as absorbing as bridge and chess have their world feder-
• How to Evolve Cooperation Christine Taylor and Martin A. Nowak
• Received 24 September; accepted 16 November 2004; doi:10.1038/nature03211. 1. MacArthur, R. H. & Wilson, E. O. The Theory of Island Biogeography (Princeton Univ. Press,
• * Author to whom correspondence should be addressed. E-mail: nowak@ias.edu
• Multiple strategies in structured populations Corina E. Tarnitaa,b,c,1,2
• he principle of give and take per-vades our society. It is older than
• Journal of Theoretical Biology 251 (2008) 698707 Evolutionary stability on graphs
• Dynamics of chronic myeloid leukaemia Franziska Michor1
• This article was published in an Elsevier journal. The attached copy is furnished to the author for non-commercial research and
• J. theor. Biol. (1995) 175, 325353 00225193/95/150325+29 $12.00/0 7 1995 Academic Press Limited
• Mathematical Biology of HIV Infections: Antigenic Variation and Diversity Threshold
• VOLUME 76, NUMBER 11 P H Y S I C A L R E V I E W L E T T E R S 11 MARCH 1996 No Signs of Hidden Language in Noncoding DNA
• CANCER BIOLOGY Infectioustumourcells
• www.sciam.com SCIENTIFIC AMERICAN 83 THE ECONOMICS
• pleased my parents. But in the last vacation before university, I realized that my passion
• against HIV is one notable example. At the same time, however, there is as yet no agreed
• REGISSEURIN SCHIRIN KHODADADIAN BER
• JOURNAL OF VIROLOGY, 0022-538X/98/$04.00 0
• Natural selection of the critical period for language acquisition
• Mutation-selection equilibrium in games with multiple strategies Tibor Antal a,b,, Arne Traulsen c
• Prevolutionary dynamics and the origin of evolution Martin A. Nowak
• How to be an IAEA inspector
• Stochastic dynamics of invasion and fixation Arne Traulsen,1
• Journal of Theoretical Biology 243 (2006) 437443 Active linking in evolutionary games
• Exploration dynamics in evolutionary games Arne Traulsena,b,1
• T-cell induced pathogenesis in HIV: bystander effects and latent infection
• Gambling for global goods Anna Dreber*
• 564 NOTICES OF THE AMS VOLUME 47, NUMBER 5 Book Review
• Current Biology Vol 16 No 22 With this picture of herdsmen
• Cytotoxic T-cell abundance and virus load in human immunode ciency virus type 1
• Coevolution of Strategy and Structure in Complex Networks with Dynamical Linking Jorge M. Pacheco,1,2
• J. theor. Biol. (1999) 200, 147}162 Article No. jtbi.1999.0981, available online at http://www.idealibrary.com on
• Strategy abundance in 2 2 games for arbitrary mutation rates Tibor Antal a,, Martin A. Nowak a
• HIV therapy: Managing resistance Dominik Wodarz and Martin A. Nowak
• HIV-1 dynamics revisited: biphasic decay by cytotoxic T lymphocyte killing?
• doi:10.1006/bulm.2002.0322 Bulletin of Mathematical Biology (2003) 65, 6793
• Journal of Theoretical Biology 247 (2007) 574580 Tit-for-tat or win-stay, lose-shift?
• Proc. Natl. Acad. Sci. USA Vol. 93, pp. 1532315328, December 1996
• Journal of Theoretical Biology 243 (2006) 8697 The replicator equation on graphs
• September 2007 273NEW BIOLOGICAL BOOKS Evolutionary Dynamics: Exploring the Equa-
• A new theory of cytotoxic T-lymphocyte memory: implications for HIV treatment
• Winners don't punish Anna Dreber1,6
• DOI: 10.1126/science.1141588 , 1905 (2007);316Science
• Mutationselection equilibrium in games with mixed strategies Corina E. Tarnita a,b,, Tibor Antal a,b
• Competition-colonization dynamics in an RNA virus Samuel Ojosnegrosa,b
• * Author to whom correspondence should be addressed. E-mail: plotkin@ias.edu
• A Cellular Model to Explain the Pathogenesis of Infection by the Hepatitis B Virus
• 2006 Nature Publishing Group A simple rule for the evolution of cooperation
• 15 Osmond, D.G. and Nossal, N.G. (1974) Cell. Immunol. 13, 132145 16 Osmond, D.G. (1993) Immunol. Today 14, 3437
• The logic of indirect speech Steven Pinker*
• Proc. Natl. Acad. Sci. USA Vol. 96, pp. 80288033, July 1999
• Nature Macmillan Publishers Ltd 1998 12. Loughrin, J. H., Manukian, A., Heath, R. R. & Tumlinson, J. H. Diurnal cycle of emission of induced
• Journal of Theoretical Biology 243 (2006) 245251 A symmetry of fixation times in evoultionary dynamics
• the book, while I found many references that were new to me. The extremely high number of citations and the
• NATURE OUTLOOK PARKINSON'S DISEASE Outlook:Parkison'sdisease466,1105114826August2010no.7310www.nature.com/nature
• J. theor. Biol. (2000) 205, 147}159 doi:10.1006/jtbi.2000.2053, available online at http://www.idealibrary.com on
• Prelife catalysts and replicators Hisashi Ohtsuki1,2,* and Martin A. Nowak3,4
• Originator dynamics Michael Manapat a,b
• Nowak MA & Sigmund K (2000). Games on Grids. In: The Geometry of Ecological Interactions: Simplifying Spatial Complexity, eds. Dieckmann U, Law R & Metz JAJ, pp. 135150. Cambridge
• The role of chromosomal instability in tumor initiation
• Genetic control and dynamics of the cellular immune response to the human T-cell
• Genetic Progression and the Waiting Time Niko Beerenwinkel1*
• 0014-2980/00/0909-2704$17.50+.50/0 WILEY-VCH Verlag GmbH, D-69451 Weinheim, 2000 CD8 memory, immunodominance, and antigenic
• Nature Macmillan Publishers Ltd 1998 exclusive birthright, while remaining blind
• How populations cohere: five rules for cooperation
• Journal of Theoretical Biology 246 (2007) 681694 Evolutionary graph theory: Breaking the symmetry
• The age incidence of chronic myeloid leukemia can be explained by a one-mutation model Franziska Michor, Yoh Iwasa, and Martin A. Nowak
• J. theor. Biol. (1998) 194, 561574 Article No. jt980775
• Predicting species diversity in tropical forests Joshua B. Plotkina,b
• JOURNAL OF VIROLOGY, Dec. 2002, p. 1238812393 Vol. 76, No. 23 0022-538X/02/$04.00 0 DOI: 10.1128/JVI.76.23.1238812393.2002
• Evolutionary games on cycles Hisashi Ohtsuki1,2,* and Martin A. Nowak2,3,4
• Digital Object Identifier (DOI): 10.1007/s00285-005-0369-8
• Nature Macmillan Publishers Ltd 1998 Cyber-sociology
• Journal of Theoretical Biology 223 (2003) 433450 Mutationselection networks of cancer initiation
• Specific therapy regimes could lead to long-term immunological control of HIV
• CONTENTS Volume 331 Issue 6014 125 Boosting Minorities in Science
• Adherence and drug resistance: predictions for therapy outcome
• TRENDS in Cognitive Sciences Vol.5 No.7 July 2001 http://tics.trends.com 1364-6613/01/$ see front matter 2001 Elsevier Science Ltd. All rights reserved. PII: S1364-6613(00)01683-1
• Journal of Theoretical Biology 247 (2007) 462470 Direct reciprocity on graphs
• Indirect reciprocity provides only a narrow margin of efficiency for costly punishment
• JOURNAL OF VIROLOGY, 0022-538X/00/$04.00 0
• Nowak MA & Sigmund K (2002). Super-and Coinfection: The Two Extremes. In: Adaptive Dynamics of Infectious Diseases: In Pursuit of Virulence Management, eds. Dieckmann U, Metz JAJ, Sabelis MW &
• J. theor. Biol. (2002) 219, 9398 doi:10.1006/yjtbi.3112, available online at http://www.idealibrary.com on
• Beautiful models The dynamics of evolutionary processes creates a remarkable picture of life.
• Chromodynamics of Cooperation in Finite Populations Arne Traulsen*, Martin A. Nowak
• J. theor. Biol. (1995) 174, 427440 00225193/95/120427+14 $08.00/0 7 1995 Academic Press Limited
• -Author to whom correspondence should be addressed. E-mail: ramy}arnaout@student.hms.harvard.edu
• Transient antiretroviral treatment during acute simian immunode ciency virus infection
• NATURE|Vol 441|1 June 2006 NEWS & VIEWS syndrome: behavioural changes, decreased
• Virus phenotype switching and disease progression in HIV-1 infection
• Individual versus systemic risk and the Regulator's Dilemma
• nATuRE CommunICATIons | 2:434 | DoI: 10.1038/ncomms1442 | www.nature.com/naturecommunications 2011 Macmillan Publishers Limited. All rights reserved.
• Prosperity is associated with instability in dynamical networks Matteo Cavaliere a,1,2
• INVITED SPEAKER ABSTRACTS SA I REGULATION OF TRANSCRIPTION DURING T CELL DIFFERENTIATION
• How mutation affects evolutionary games on graphs Benjamin Allen a,b,, Arne Traulsen c
• Theoretical Population Biology 81 (2012) 6980 Contents lists available at SciVerse ScienceDirect
• Evolving cooperation Martin A. Nowak a,b,c,n