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- Interpolation with Orthogonal Polynomials 0 100 200 300 400 500 600
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- CAAD Lab Technical Report 2004-02 FPGA Acceleration of Rigid Molecule
- Fast and Accurate NCBI BLASTP: Acceleration with Multiphase FPGA-Based Prefiltering
- Fast Binding Site Mapping using GPUs and CUDA This work was supported in part by the NIH through award #R01-
- FPGA-based Acceleration of CHARMM-potential Minimization*
- To appear in Journal of Computational Physics Parallel Discrete Molecular Dynamics Simulation
- Reconfigurable Supercomputing with Scalable Systolic Arrays and In-Stream Control for Wavefront Genomics Processing
- FPGA Acceleration of Rigid-Molecule Docking Codes
- Parallel Discrete Event Simulation of Molecular Dynamics Through Event-Based Decomposition
- CAAD BLASTP: NCBI BLASTP Accelerated with FPGA-Based Pre-Filtering
- This article was published in an Elsevier journal. The attached copy is furnished to the author for non-commercial research and
- Amenability of Multigrid Computations to FPGA-Based Acceleration
- C O V E R F E A T U R E 0018-9162/07/$25.00 2007 IEEE50 Computer Published by the IEEE Computer Society
- Hindawi Publishing Corporation EURASIP Journal on Applied Signal Processing
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- CAAD Lab Technical Report 2004-01 Processing Repetitive Sequence Structures at
- Processing Repetitive Sequence Structures at Streaming Rate with an FPGA
- T. VanCourt, et al. / Proc. Field Programmable Logic and Applications (2004) Extended Version
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- A System for Evaluating Performance and Cost of SIMD Array Designs
- Processor/Memory/Array Size Tradeoffs in the Design of SIMD Arrays for a
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- THE EVALUATION OF MASSIVELY PARALLEL ARRAY ARCHITECTURES A Dissertation Presented
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- SIZING OF PROCESSING ARRAYS FOR FPGA-BASED COMPUTATION* Tom VanCourt and Martin Herbordt
- Requirements for any FPGA/HPCRequirements for any FPGA/HPC Application Development Tool FlowApplication Development Tool Flow
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- Associative, Multiassociative, and Hybrid Processing Martin C. Herbordt
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- BOSTON UNIVERSITY COLLEGE OF ENGINEERING
- Single Pass, BLAST-Like, Approximate String Matching on FPGAs Martin C. Herbordt Josh Model Yongfeng Gu Bharat Sukhwani Tom VanCourt
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- FPGA ACCELERATION OF MOLECULAR DYNAMICS COMPUTATIONSFPGA ACCELERATION OF MOLECULAR DYNAMICS COMPUTATIONS Yongfeng Gu, Tom VanCourt, Martin C. HerbordtYongfeng Gu, Tom VanCourt, Martin C. Herbordt
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- FPGA Acceleration of Discrete Molecular Dynamics Simulation
- Fast Binding Site Mapping using GPUs and CUDA This work was supported in part by the NIH through award #R01-
- Using Emulations to Enhance the Performance of Parallel Architectures
- Accelerating Molecular Dynamics Simulations With Configurable Circuits
- Design Tradeoffs of Single Chip Multi-computer Networks Presented to the Faculty of the Department of Computer Engineering
- This article appeared in a journal published by Elsevier. The attached copy is furnished to the author for internal non-commercial research
- Computing Models for FPGA-Based Accelerators with Case Studies in Molecular Modeling
- Interaction feasibility -test by 3D correlation Two molecules are are represented as 3D voxel grids.
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