- http://web.mit.edu/manoli/chars/www/chars/nodes-all.html 1 of 14 11/18/2003 5:32 PM
- Systematic discovery of regulatory motifs in conserved regions of the human genome, including thousands
- RESEARCH COMMUNICATION A single Hox locus
- RESEARCH COMMUNICATION Whole-genome ChIPchip
- PUBLIC RELEASE MBE msq189 GM
- SubMAP: Aligning metabolic pathways with subnetwork mappings
- Network Motif Discovery Using Subgraph Enumeration and Symmetry-Breaking
- Phylogenetically and Spatially Conserved Word Pairs Associated with Gene Expression Changes in Yeasts
- 10.1101/gad.1509607Access the most recent version at doi: 2007 21: 385-390Genes & Dev.
- Small RNA pathways in platypus Elizabeth P. Murchison1
- Reliable prediction of regulator targets using 12 Drosophila genomes Alexander Stark*+1,2
- Methods in comparative genomics: genome correspondence, gene identification and motif discovery
- 3d Morphing -6.837 Final Project Proposal http://web.mit.edu/manoli/morph/www/morph.html 1 of 13 11/18/2003 5:43 PM
- RoboLogo http://web.mit.edu/manoli/robologo/www/full.html 1 of 9 11/18/2003 5:36 PM
- Manolis Kamvysselis -Constraint Model of the W3C Mini Robot http://web.mit.edu/manoli/webbot/www/webbot.html 1 of 5 11/18/2003 5:48 PM
- Gene finding using multiple related species: a classification approach. Manolis Kellis
- Evolution with a Purpose http://web.mit.edu/manoli/evolution/www/main.html 1 of 8 11/18/2003 5:53 PM
- Imagina: A Cognitive Abstraction Approach to Sketch-Based Image Retrieval
- 2005 Nature Publishing Group Genome sequence, comparative analysis
- Evolution of pathogenicity and sexual reproduction in eight Candida genomes
- Systematic discovery and characterization of fly microRNAs using 12 Drosophila genomes
- Discrete Small RNA-Generating Loci as Master Regulators of
- Conservation of small RNA pathways in platypus Elizabeth P. Murchison,1
- Revisiting the protein-coding gene catalog of Drosophila melanogaster using 12 fly genomes
- Performance and Scalability of Discriminative Metrics for Comparative Gene Identification in 12 Drosophila
- The consensus coding sequence (CCDS) project: Identifying a common protein-coding gene set
- ORIGINAL PAPER Optimization of parameters for coverage of low molecular
- BioMed Central Page 1 of 13
- Reliable prediction of regulator targets using 12 Drosophila genomes
- 14 Phylogenomic Approach to the Evolutionary Dynamics of Gene
- Information-Theoretic Inference of Gene Networks Using Backward Elimination
- Discovery of functional elements in 12 Drosophila genomes using evolutionary
- Mood -Recognizing Music based on Changes in Auditory Attentional State http://web.mit.edu/manoli/mood/www/the-full-mood.html 1 of 12 11/18/2003 5:29 PM
- Distinguishing protein-coding and noncoding genes in the human genome
- Accurate gene-tree reconstruction by learning gene-and species-specific substitution rates
- A New Voronoi-Based Surface Reconstruction Algorithm Nina Amenta
- Two Dimensional Morphing using the Extended Gaussian Image http://web.mit.edu/manoli/ecimorph/www/ecimorph.html 1 of 7 11/18/2003 5:40 PM
- Systematic discovery and characterization of fly microRNAs using 12 Drosophila genomes.
- Genome Biology 2005, 6:312 commentreviewsreportsdepositedresearchinteractionsinformationrefereedresearch
- RNA Polymerase Stalling at Developmental Control Genes in the Drosophila Embryo
- Genome Biology 2003, 4:R43 commentreviewsreportsdepositedresearchrefereedresearchinteractionsinformation
- Histone modifications at human enhancers reflect global cell-type-specific gene expression
- selective transport would involve a coupling be-tween cofactor binding and pore opening. A similar
- Meeting report The changing face of genomics
- Discrete Small RNA-Generating Loci as Master Regulators of
- Evolution, biogenesis, expression, and target predictions of a substantially expanded set
- 2010NatureAmerica,Inc.Allrightsreserved. nature biotechnology advance online publication
- Accurate gene-tree reconstruction by learning gene-and species-specific substitution rates
- ; Evolution of genes and genomes on the Drosophila phylogeny
- COMPUTATIONAL COMPARATIVE GENOMICS: GENES, REGULATION, EVOLUTION
- Whole-genome Comparative Annotation and Regulatory Motif Discovery in Multiple Yeast Species
- The NIH Roadmap Epigenomics Mapping Consortium Bradley E. Bernstein1,2
- Performance and scalability of discriminative metrics for comparative gene identification in 12 Drosophila genomes
- JOURNAL OF COMPUTATIONAL BIOLOGY Volume 11, Numbers 23, 2004
- Invest -An Investment Assistant http://web.mit.edu/manoli/invest/www/invest.html 1 of 11 11/18/2003 5:50 PM
- 2004 NaturePublishing Group Genome duplication in the teleost fish
- Revisiting the protein-coding gene catalog of Drosophila melanogaster using twelve fly genomes
- RNA polymerase stalling at developmental control genes in the Drosophila melanogaster embryo
- A Comprehensive Map of Insulator Elements for the Drosophila Genome
- Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals
- Evolution, Biogenesis, Expression, and Target Predictions of a Substantially Expanded Set of Drosophila MicroRNAs
