- Modeling of Flap Endonuclease Interactions with DNA Substrate
- New Concepts A Novel View of pH Titration in Biomolecules
- Theoretical studies of time-resolved spectroscopy of protein Jonathan D. Hirst,*a
- Proton Affinity Changes Driving Unidirectional Proton Transport in the Bacteriorhodopsin Photocycle
- Modification of the Generalized Born Model Suitable for Macromolecules Alexey Onufriev, Donald Bashford, and David A. Case*
- Effective Born Radii in the Generalized Born Approximation: The Importance of Being Perfect
- Structural Details, Pathways, and Energetics of Unfolding Apomyoglobin
- Exploring Protein Native States and Large-Scale Conformational Changes With a Modified
- Decomposing Complex Cooperative Ligand Binding into Simple Components: Connections between Microscopic and Macroscopic Models
- The Amber Biomolecular Simulation Programs DAVID A. CASE,1
- Analytical electrostatics for biomolecules: Beyond the generalized Born approximation
- A Simple Clustering Algorithm Can Be Accurate Enough for Use in Calculations of pKs in Macromolecules
- A Computational Study of Nucleosomal DNA Flexibility Jory Z. Ruscio* and Alexey Onufrievy
- Generalized Born Model with a Simple, Robust Molecular Volume Correction
- Analysis of integral expressions for effective Born radii John Mongan
- An analytical approach to computing biomolecular electrostatic potential. II. Validation and applications
- Provided for non-commercial research and educational use only. Not for reproduction, distribution or commercial use.
- The generalized Born model: its foundation, applications, and limitations
- Performance Comparison of Generalized Born and Poisson Methods in the Calculation of Electrostatic
- An analytical approach to computing biomolecular electrostatic potential. I. Derivation and analysis
- For more information about research opportunities, please contact Dr. Alexey Onufriev: alexey"at"cs.vt.edu.
- Incorporating variable dielectric environments into the generalized Born model
