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Advanced user support: On the parallelization of a non hydrostatic, sigma co-ordinate ocean model
 

Summary: Advanced user support: On the parallelization of
a non hydrostatic, sigma co-ordinate ocean model
Helge Avlesen, Para//ab,
Bergen Center for Computational Science, University of Bergen,
Bergen
November 2004
Abstract
This report describes the preliminary results from the parallelization of a non-
hydrostatic, sigma co-ordinate ocean model. The work builds upon a previous
project in optimizing the non hydrostatic parts of the Bergen Ocean Model (BOM).
The model has been parallelised through calls to a high level library, targeted at fi-
nite difference codes, implemented on top of MPI. The library is optimized for
clusters with inexpensive, high latency interconnects, by offering means to accu-
mulate message exchange operations. We also aimed to explore the use of a variant
of the iterative scheme with reduced number of inner products in order to even fur-
ther improve the scalability of the iterative algorithm on linux clusters.
1 Introduction
Numerical ocean modeling is steadily becoming more important in ocean engineer-
ing and management of marine resources. Most modern numerical ocean models still
rely on physical simplifications of the model equations such as the hydrostatic shallow

  

Source: Avlesen, Helge - Bergen Center for Computational Science, Universitetet i Bergen

 

Collections: Geosciences