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Summary: Identification of ProteinProtein Interaction Sites from
Docking Energy Landscapes
Juan FernaŽndez-Recio1
, Maxim Totrov2
and Ruben Abagyan1
*
1
Department of Molecular
Biology, The Scripps Research
Institute, 10550 North Torrey
Pines Road, La Jolla, CA 92037
USA
2
Molsoft, LLC, 3366 Torrey
Pines Court, La Jolla, CA
92037, USA
Protein recognition is one of the most challenging and intriguing pro-
blems in structural biology. Despite all the available structural, sequence
and biophysical information about proteinprotein complexes, the phy-
sico-chemical patterns, if any, that make a protein surface likely to be
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