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SUPPLEMENTARY NOTES A system-level approach for deciphering the transcriptional

A system-level approach for deciphering the transcriptional
response to prion infection
Mattia Zampieri 1,2
, Giuseppe Legname 3
, Daniel Segre' 4,5
and Claudio Altafini 2,
1. Institute of Molecular Systems Biology, ETH, Wolfgang-Pauli-Str. 16, 8093 Zurich, Switzerland
2. SISSA-ISAS,International School for Advanced Studies via Bonomea 265, 34136 Trieste, Italy
3. Neurobiology Sector, via Bonomea 265, 34136 Trieste
4. Boston University Bioinformatics Program, 24 Cummington St., Boston
5. Boston University Biomedical Engineering, 44 Cummington St., Boston
August 11, 2011
Description of supplementary data
The following additional data are available with the on-line version of this paper. Additional data file
1 is a table listing the GEO ID of experiments included in the microarray analysis, for mouse, rat and
human samples. Additional data file 2 is a table listing the algorithm predictions. For each gene the
associated q.value and the estimated perturbation intensity are reported. Additional data file 3, 4 and 5 are


Source: Altafini, Claudio - Functional Analysis Sector, Scuola Internazionale Superiore di Studi Avanzati (SISSA)


Collections: Engineering; Mathematics