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Package `lemma' April 7, 2010
 

Summary: Package `lemma'
April 7, 2010
Version 1.3-1
Date 2010-03-23
Title Laplace approximated EM Microarray Analysis
Author Haim Bar, Elizabeth Schifano.
Maintainer Haim Bar
Description LEMMA is used to detect "nonnull genes" - genes for which the average response in
treatment group 1 is significantly different from the average response in group 2, in normalized
microarray data. LEMMA is an implementation of an approximate EM algorithm to estimate the
parameters in the assumed linear model in Bar, Booth, Schifano, Wells (2009).
License GPL (>= 2)
URL http://www.stat.cornell.edu/lemma
R topics documented:
apoai . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1
colon . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 2
ecoli . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 3
LEMMA . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 3
lemma . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 5
lemmaPlots . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 8

  

Source: Angenent, Lars T. - Department of Biological and Environmental Engineering, Cornell University

 

Collections: Renewable Energy; Engineering