| Sample search results for: aaindex amino acid |
| 1 | D202D205 Nucleic Acids Research, 2008, Vol. 36, Database issue Published online 12 November 2007 doi:10.1093/nar/gkm998 | ||
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Summary: doi:10.1093/nar/gkm998 AAindex: amino acid index database, progress report 2008 Shuichi Kawashima1... now: AAindex1 for the amino acid index of 20 numerical values, AAindex2 for the amino acid... of three ... |
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Source: Pokarowski, Piotr - Instytut Matematyki Stosowanej i Mechaniki, Uniwersytet Warszawski |
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Collection: Computer Technologies and Information Sciences ; Mathematics |
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| 2 | BIOMOLECULAR INVARIANTS OF AMINO ACID TREES Debra Knisley | ||
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Summary: in the AAindex database. AAin- dex is a database of amino acid indices and amino acid mutation matrices. An amino... BIOMOLECULAR INVARIANTS OF AMINO ACID TREES By Debra Knisley Jeff Knisley and Leonard Roberts IMA... : ... |
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Source: Institute for Mathematics and its Applications |
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Collection: Mathematics |
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| 3 | Iosif Vaisman Email: ivaisman@gmu.edu | ||
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Summary: ) · VTML (Maximum Likelihood Estimation) Comprehensive list: Amino Acid Matrices in AAindex (http://www.genome.jp/aaindex/AAindex... Distant Homologs) · HSDM (Homologous Structure Derived Matrix) · WAC (Amino Acid Comparative Profiles... of programs · blastp - ... |
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Source: Vaisman, Iosif - Bioinformatics and Computational Biology Program, School of Computational Sciences, George Mason University |
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Collection: Biotechnology |
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| 4 | Can we match state-of-the-art? YES, PCFGs slightly outperformed Profile HMMs | ||
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Summary: § Amino acid properties § Quantitative properties of AA: - AAindex[3]: over 500 properties, e.g. charge... The analysis of a protein, through the evaluation of interactions between the amino acids composing its... task due to the larger amino ... |
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Source: Nebel, Jean-Christophe - School of Computing and Information Systems, Kingston University |
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Collection: Computer Technologies and Information Sciences |
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| 5 | PCFG based on quantitative representation of AA properties proved to be successful for PS00219 | ||
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Summary: be combined to achieve more robust results § Amino acid properties § Definition: AAindex database [3... alphabet, we use quantitative properties of amino acids to reduce the number of symbols. Our technique... relationships between amino acids ... |
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Source: Nebel, Jean-Christophe - School of Computing and Information Systems, Kingston University |
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Collection: Computer Technologies and Information Sciences |
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| 6 | Prediction of Contact Maps Using Support Vector Machines Ying Zhao and George Karypis | ||
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Summary: physicochemical vec- tors in AAindex, a database of published amino acid prop- erties [9]. Given a multiple... related features (SP (Amino Acids) + SP (AAindex)) as SP. Models We trained 15 SVM models by using... Features Model Features Model Features 1 PSS 6 SP ... |
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Source: Karypis, George - Department of Computer Science and Engineering, University of Minnesota |
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Collection: Computer Technologies and Information Sciences |
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| 7 | Structure prediction of a protein channel based on probabilistic formal grammars and the continuous ion flow model | ||
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Summary: of the protein alphabet, we used quantitative properties of amino acids (AA) to decrease the number of rules... N I T I O N SCAN- NER GA AA property selector Positive sample AA-index db SCAN- NER . . . Gi |
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Source: Nebel, Jean-Christophe - School of Computing and Information Systems, Kingston University |
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Collection: Computer Technologies and Information Sciences |
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| 8 | Proc. Natl. Acad. Sci. USA Vol. 96, pp. 35783583, March 1999 | ||
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Summary: of the other nonpolar residues. A computer-readable database of amino acid characteristics, AAINDEX (22... ), was used to identify amino acid properties associated with thermal adaptation. A ``property'' in AAINDEX... of preconceived notions, we surveyed the extensive ... |
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Source: Badger, Jonathan - Institute for Genomic Research, Rockville |
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Collection: Biotechnology ; Biology and Medicine |
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| 9 | BLOMAP: AN ENCODING OF AMINO ACIDS WHICH IMPROVES SIGNAL PEPTIDE CLEAVAGE SITE PREDICTION | ||
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Summary: ). "AAindex: Amino Acid index database." Nucleic Acids Research 28: 374. 9. Kyte, J. and R. F. Doolittle (1982... BLOMAP: AN ENCODING OF AMINO ACIDS WHICH IMPROVES SIGNAL PEPTIDE CLEAVAGE SITE PREDICTION STEFAN... of amino acid ... |
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Source: Wong, Limsoon - Department of Computational Science, National University of Singapore |
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Collection: Computer Technologies and Information Sciences |
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| 10 | BLOMAP: AN ENCODING OF AMINO ACIDS WHICH IMPROVES SIGNAL PEPTIDE CLEAVAGE SITE PREDICTION | ||
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Summary: ). "AAindex: Amino Acid index database." Nucleic Acids Research 28: 374. #12;10 9. Kyte, J. and R. F... 1 BLOMAP: AN ENCODING OF AMINO ACIDS WHICH IMPROVES SIGNAL PEPTIDE CLEAVAGE SITE PREDICTION STEFAN... of amino acid ... |
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Source: Bodén, Mikael - School of Information Technology and Electrical Engineering, University of Queensland |
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Collection: Computer Technologies and Information Sciences |
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| 11 | PREDICTING B CELL EPITOPE RESIDUES WITH NETWORK TOPOLOGY BASED AMINO ACID INDICES | ||
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Summary: 484 amino acid indices in the AAindex database [20] with sequence profiling methods. They found... performance has been disputed [21-23]. In a recent report, 484 amino acid indices in the AAindex database were... . and Kanehisa, M., AAindex: ... |
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Source: Wong, Limsoon - Department of Computational Science, National University of Singapore |
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Collection: Computer Technologies and Information Sciences |
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| 12 | Protein & Peptide Letters, 2010, 17, 1129-1135 1129 0929-8665/10 $55.00+.00 2010 Bentham Science Publishers Ltd. | ||
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Summary: (2009), 359-364. [24] Kawashima, S.; Kanehisa, M. AAindex: amino acid index data- base. Nucleic Acids Res... ., 2000, 28(1), 374. [25] Kawashima, S.; Ogata, H.; Kanehisa, M. AAindex: Amino Acid Index database... feature selection and prioritization ... |
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Source: Hefei Institute of Intelligent Machines - Intelligent Computing Lab |
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Collection: Computer Technologies and Information Sciences |
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| 13 | proteinsSTRUCTURE O FUNCTION O BIOINFORMATICS Ideal amino acid exchange forms for | ||
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Summary: of approximating vectors To interpret our approximations we used the AAindex database46 of amino acid properties... proteinsSTRUCTURE O FUNCTION O BIOINFORMATICS Ideal amino acid exchange forms for approximating... , Faculty of Chemistry, Warsaw University, 02-093 Warsaw, Poland ... |
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Source: Pokarowski, Piotr - Instytut Matematyki Stosowanej i Mechaniki, Uniwersytet Warszawski |
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Collection: Computer Technologies and Information Sciences ; Mathematics |
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| 14 | Codon Usage Bias and Mutation Constraints Reduce the Level of Error Minimization of the Genetic Code | ||
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Summary: -- Amino acid similarity -- Origin of life Introduction The genetic code is not random. It has been... proposed that the structure of the genetic code reflects the physiochemical properties of amino acids... for minimization of the chemical distances between amino ... |
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Source: Archetti, Marco - Department of Organismic and Evolutionary Biology, Harvard University |
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Collection: Biology and Medicine |
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| 15 | Solving the protein sequence metric problem William R. Atchley* | ||
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Summary: - Index) containing 494 such amino acid indices (www.genome. ad.jp dbget aaindex.html). These indices... , and related problems. Herein, we use multivariate statistical analyses on almost 500 amino acid attributes... to produce a small set of highly interpretable numeric patterns of ... |
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Source: Atchley, William R.- Department of Genetics, North Carolina State University |
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Collection: Biology and Medicine |
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| 16 | PROPERTY-DEPENDENT ANALYSIS OF ALIGNED PROTEINS FROM TWO OR MORE POPULATIONS | ||
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Summary: numerical properties of the amino acids were downloaded from the database AAindex release 6 [9] or collected... . Kawashima, H. Ogata and M. Kanehisa. AAindex: amino acid index database. Nucleic Acids Res., 27, 368... of proteins. Analysis of ... |
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Source: Wong, Limsoon - Department of Computational Science, National University of Singapore |
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Collection: Computer Technologies and Information Sciences |
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| 17 | Protein & Peptide Letters, 2010, 17, 1123-1128 1123 0929-8665/10 $55.00+.00 2010 Bentham Science Publishers Ltd. | ||
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Summary: ). The original val- ues of the five physicochemical properties for each amino acid are obtained from the AAindex... .; Pokarowski, P.; Pokarowska, M.; Kolinski, A.; Katayama, T.; Kanehisa, M. AAindex: amino acid index database... between the number of known ... |
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Source: Hefei Institute of Intelligent Machines - Intelligent Computing Lab |
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Collection: Computer Technologies and Information Sciences |
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| 18 | Statistical Potential-Based Amino Acid Similarity Matrices for Aligning Distantly Related Protein Sequences | ||
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Summary: Statistical Potential-Based Amino Acid Similarity Matrices for Aligning Distantly Related Protein... profiles have been developed. More fundamentally, a better amino acid similarity matrix can improve... novel amino acid similarity matrices from knowledge-based ... |
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Source: Kihara, Daisuke - Department of Biological Sciences, Purdue University |
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Collection: Biology and Medicine ; Biotechnology |
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| 19 | An Information Theoretic Quantitative Approach to Natural Selection | ||
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Summary: , J. Bacteriol., 182(18), 53285350 (2000). [20] Kawashima, S. and M. Kanehisa, AAindex: Amino Acid... mapping via the mutual information between the decoded and phenotypic amino acids. On the other hand... on the single amino acid level is ... |
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Source: Bejerano, Gill - Departments of Computer Science & Developmental Biology, Stanford University |
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Collection: Computer Technologies and Information Sciences ; Biology and Medicine |
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| 20 | SPRED: A machine learning approach for the identification of classical and non-classical secretory proteins in mammalian genomes | ||
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Summary: of physicochemical properties of amino acid, we selected 31 physicochemical properties from the UMBC AAIndex database... . Pokarowska, A. Kolinski, T. Katayama, M. Kanehisa, AAindex: amino acid index database, progress report 2008... (1460 amino ... |
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Source: |
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Collection: Computer Technologies and Information Sciences |
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| 21 | Kernel Methods for Calmodulin Binding and Binding Site Michael Hamilton | ||
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Summary: ] S. Kawashima, H. Ogata, and M. Kanehisa. AAindex: Amino acid index database. Nucleic Acids Research... .89 for detecting binding site locations at the amino acid level. We apply our classifiers to the problem of detect... using fea- tures that characterize sequence ... |
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Source: Ben-hur, Asa - Department of Computer Science, Colorado State University |
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Collection: Computer Technologies and Information Sciences ; Biotechnology |
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| 22 | Towards 3D modeling of interacting TM helix pairs based on | ||
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Summary: . We use the 5 categories of amino-acids from AAindex [28] as suggested in [22]: beta propensity, alpha... , Pokarowski P, Pokarowska M, Kolinski A, Katayama T, Kanehisa M 2008. AAindex: amino acid index database... for small proteins up to 200 amino ... |
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Source: Nebel, Jean-Christophe - School of Computing and Information Systems, Kingston University |
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Collection: Computer Technologies and Information Sciences |
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| 23 | Introduction to Bioinformatics A Complex Systems Approach | ||
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Summary: different properties of amino acids (e.g. volume and hydrophobicity) AAIndex: www.genome.ad.jp/dbget/aaindex... ) can be stored #12;10 Proteins: Functional Products Sequences of Amino acids via peptide bonds Primary... into functional proteins Triplet combinations of ... |
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Source: Rocha, Luis - School of Informatics, Indiana University |
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Collection: Computer Technologies and Information Sciences |
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| 24 | GTQ, Chemistry 212, Dr. Glaser, FS96 --1 --GTQ on Amino Acids. (40 points, nomenclature, acid/base properties, synthesis) | ||
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Summary: GTQ, Chemistry 212, Dr. Glaser, FS96 -- 1 -- GTQ on Amino Acids. (40 points, nomenclature, acid... /base properties, synthesis) To be precise, amino acids are alpha-amino carboxylic acids, that is, the amino group... is ... |
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Source: Glaser, Rainer - Department of Chemistry, University of Missouri-Columbia |
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Collection: Chemistry |
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| 25 | RESEARCH ARTICLE Open Access BLProt: prediction of bioluminescent proteins | ||
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Summary: , Kanehisa M: AAindex: amino acid index database. Nucleic Acids Res 1999, 27:368-369. 32. Pugalenthi G, Kumar... removed. Furthermore, non-bioluminescent protein domains with less than 40 amino acids were excluded from... properties of amino ... |
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Source: |
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Collection: Computer Technologies and Information Sciences |
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| 26 | JOURNAL OF BACTERIOLOGY, May 2005, p. 29832991 Vol. 187, No. 9 0021-9193/05/$08.00 0 doi:10.1128/JB.187.9.29832991.2005 | ||
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Summary: . 1999. AAindex: amino acid index database. Nucleic Acids Res. 27:368369. 24. Kyte, J., and R. F... M MgSO4, 50 mg/ml of 18 amino acids [methionine and cysteine were not included in the amino acid... were grown at 30°C in ... |
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Source: Gerstein, Mark - Department of Molecular Biophysics and Biochemistry, Yale University; Xia, Yu "Brandon" - Bioinformatics Program and Department of Chemistry, Boston University |
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Collection: Biology and Medicine ; Biotechnology |
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| 27 | Sequence-driven features for prediction of subcellular localization of proteins | ||
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Summary: -dimensional feature vector based on amino acids composition. We use the AAindex database [15] to get... . Prentice Hall, New Jersey, 1988. [15] S. Kawashima and M. Kanehisa. AAindex: amino acid index database... ) methods involving the detection of ... |
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Source: Choi, Seungjin - Department of Computer Science and Engineering, Pohang University of Science and Technology |
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Collection: Multidisciplinary Databases and Resources ; Computer Technologies and Information Sciences |
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| 28 | Comparing Kernels For Predicting Protein Binding Sites From Amino Acid Sequence | ||
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Summary: Comparing Kernels For Predicting Protein Binding Sites From Amino Acid Sequence Feihong Wu1... protein binding sites and to detect specific amino acid residues that contribute to the specificity... , sequence-alignment kernel, and amino acid substitution matrix kernel ... |
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Source: Honavar, Vasant - Department of Computer Science, Iowa State University |
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Collection: Biology and Medicine ; Computer Technologies and Information Sciences |
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| 29 | Selection on Codon Usage for Error Minimization at the Protein Level Marco Archetti | ||
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Summary: level. I develop a theoretical measure of error minimization for each codon, based on amino acid... minimization is corre- lated with the degree of codon usage bias; (iv) the amino acids that contribute more... -- Codon usage -- Nucleotide substitution -- Drosophila melanogaster -- Rodents -- ... |
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Source: Archetti, Marco - Department of Organismic and Evolutionary Biology, Harvard University |
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Collection: Biology and Medicine |
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| 30 | Epitope Prediction Algorithms for Peptide-based Vaccine Design Liliana Florea, Bjarni Halldorsson, Oliver Kohlbacher, | ||
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Summary: :1261{63, 1992. 16] S. Kawashima, H. Ogata, and M. Kanehisa. AAindex: amino acid index database. Nucleic Acids... I. These so-called class I epitopes are usually peptides of 8-11 amino acids. The pathway from... of the peptide's amino ... |
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Source: Istrail, Sorin - Center for Computational Molecular Biology & Department of Computer Science, Brown University |
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Collection: Computer Technologies and Information Sciences ; Biology and Medicine |
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| 31 | Side-Chain Flexibility in Proteins Upon Ligand Binding Rafael Najmanovich,* Josef Kuttner, Vladimir Sobolev, and Marvin Edelman | ||
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Summary: for predictive docking. Protein Eng 1999;12:271283. 37. Kawashima S, Kanehisa M. AAindex: amino acid index... of amino-acid side-chain flexibility potentially useful in molecular biology and protein engineering... - dral bonds in each amino acid attenuates the scale ... |
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Source: Najmanovich, Rafael - European Bioinformatics Institute, Wellcome Trust Genome Campus Cambridge |
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Collection: Biotechnology ; Biology and Medicine |
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| 32 | GTQ, Chemistry 212, Dr. Glaser, FS96 --1 --GTQ on Amino Acids. (40 points, nomenclature, acid/base properties, synthesis) | ||
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Summary: GTQ, Chemistry 212, Dr. Glaser, FS96 -- 1 -- GTQ on Amino Acids. (40 points, nomenclature, acid... /base properties, synthesis) To be precise, amino acids are alpha-amino carboxylic acids, that is, the amino group... is ... |
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Source: Glaser, Rainer - Department of Chemistry, University of Missouri-Columbia |
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Collection: Chemistry |
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| 33 | Calculating absolute and relative protein abundance from mass spectrometry-based | ||
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Summary: of interest, e.g., FASTA file .Information on amino acid properties, e.g., aaindex1 file from ftp://ftp.genome.jp/pub/db/community/aaindex... proteotypic peptides. We collected all amino acid features from the AAindex ... |
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Source: Vogel, Christine - Institute for Cellular and Molecular Biology, University of Texas at Austin |
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Collection: Biotechnology ; Biology and Medicine |
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| 34 | The Origin and Evolution of the Genetic Code: Statistical and Experimental Investigations | ||
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Summary: statistical association between at least some codons and the RNA binding sites for their cognate amino acids... a simpler form. 2. The exact time of code optimization remains unclear, but measures of amino acids... in codon #12;iv and amino acid usage can largely be ... |
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Source: Knight, Rob - Department of Chemistry and Biochemistry, University of Colorado at Boulder |
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Collection: Environmental Sciences and Ecology ; Biotechnology ; Biology and Medicine |
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| 35 | BIOINFORMATICS Vol. 17 no. 8 2001 | ||
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Summary: BIOINFORMATICS Vol. 17 no. 8 2001 Pages 686699 Amino acid similarity matrices based on force... on April 19, 2001 ABSTRACT Motivation: We propose a general method for deriving amino acid substitution... be possible to use pure chemical information to esti- mate the similarity of amino ... |
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Source: Kurtz, Stefan - Center for Bioinformatics, Universität Hamburg |
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Collection: Computer Technologies and Information Sciences |
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| 36 | Biology, Macromolecules 1 1 Biology 120 Textbook Reading Assignment: (for Macromolecules 2 - | ||
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Summary: acid polypeptide Alpha helix Molecular chaperones Amino group Primary structure Beta pleated sheet HSP... bond Enzyme Peptide linkage Quaternary structure Disulfide bond Essential amino acid peptide Hydrogen... bond Denaturation Non-essential amino acid Study guide: ... |
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Source: Prestwich, Ken - Biology Department, College of the Holy Cross |
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Collection: Environmental Sciences and Ecology ; Biology and Medicine |
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| 37 | Intro Biology, Macromolecules 1 1 Biology 131 Textbook Reading Assignment: (for Macromolecules 2 - | ||
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Summary: acid polypeptide Alpha helix Molecular chaperones Amino group Primary structure Beta pleated sheet HSP... bond Enzyme Peptide linkage Quaternary structure Disulfide bond Essential amino acid peptide Hydrogen... bond Denaturation Non-essential amino acid Study guide: ... |
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Source: Prestwich, Ken - Biology Department, College of the Holy Cross |
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Collection: Environmental Sciences and Ecology ; Biology and Medicine |
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| 38 | Low Exchangeability of Selenocysteine, the 21st Amino Acid, in Vertebrate Sergi Castellano,*1 | ||
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Summary: , Pokarowska M, Kolinski A, Katayama T, Kanehisa M. 2008. AAindex: amino acid index database, progress report... Low Exchangeability of Selenocysteine, the 21st Amino Acid, in Vertebrate Proteins Sergi Castellano... Gen), Barcelona, Spain Selenocysteine (Sec), the 21st ... |
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Source: Eddy, Sean - Janelia Farm Research Campus, Howard Hughes Medical Institute |
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Collection: Biology and Medicine |
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| 39 | RACEMIZATION OF METEORITIC AMINO ACIDS. B. A. Cohen1 and C. F. Chyba, The University of Ari-zona, Tucson AZ 85719 1bcohen@lpl.arizona.edu. | ||
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Summary: RACEMIZATION OF METEORITIC AMINO ACIDS. B. A. Cohen1 and C. F. Chyba, The University of Ari- zona... , Tucson AZ 85719 1bcohen@lpl.arizona.edu. Amino acids are the building blocks of proteins, among the most... biologically critical molecules. It was first noted in the 1800's that the vast majority of ... |
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Source: Cohen, Barbara Anne - Institute of Meteoritics & Department of Earth and Planetary Sciences, University of New Mexico |
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Collection: Geosciences |
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| 40 | An Introduction to Amino Acid Analysis Page 77 An Introduction to Amino Acid Analysis | ||
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Summary: An Introduction to Amino Acid Analysis Page 77 An Introduction to Amino Acid Analysis By Dr John E... method for the analysis of amino acids i.e. ion exchange separation of the amino acids followed by post... ... |
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Source: Heinke, Dietmar - School of Psychology, University of Birmingham |
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Collection: Computer Technologies and Information Sciences ; Biology and Medicine |
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| 41 | Distance matrix-based approach to protein structure prediction Andrzej Kloczkowski Robert L. Jernigan | ||
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Summary: AAindex database of over 500 amino acid indices collected by Kanehisa [2, 3] http://www.genome.jp/ aaindex... to contact potentials by 20-dimensional vectors of various physical properties of amino acids by using... a simple linear c0 ? xi ? xj and quadratic ... |
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Source: Pokarowski, Piotr - Instytut Matematyki Stosowanej i Mechaniki, Uniwersytet Warszawski |
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Collection: Computer Technologies and Information Sciences ; Mathematics |
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| 42 | BIOINFORMATICS ORIGINAL PAPER Vol. 24 no. 23 2008, pages 26912697 | ||
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Summary: signaling pathways. Cancer Biol. Ther., 4, 139163. Kawashima,S. and Kanehisa,M. (2000) AAindex: amino acid... in that this method can effectively exclude from further investigation the amino acid sequences that have little... fragments were used as inputs for the ANN. Each of the ... |
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Source: Chu, Hao-hua - Department of Computer Science and Information Engineering, National Taiwan University; Hsu, Wen-Lian - Institute of Information Science, Academia Sinica (Taiwan) |
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Collection: Computer Technologies and Information Sciences |
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| 43 | A Framework for Exploring Functional Variability in Olfactory Receptor Genes | ||
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Summary: ) AAindex: Amino Acid Index Database. Nucleic Acids Res 27: 368369. 45. Salvador S, Chan P (2004... % or more of their overall amino acid sequence. Class I genes are closely related to OR genes found in fish... sites have the same binding properties and use ... |
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Source: Crasto, Chiquito - Department of Genetics, University of Alabama at Birmingham |
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Collection: Biology and Medicine |
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| 44 | DIPARTIMENTO DI INGEGNERIA E SCIENZA DELL'INFORMAZIONE 38100 Povo --Trento (Italy), Via Sommarive 14 | ||
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Summary: (Database issue) (2007) [16] Kawashima, S., Ogata, H., Kanehisa, M.: AAindex: Amino Acid Index Database... of amino acids that constitute it, and by their spatial disposition (tertiary structure). Protein function... of amino acids that constitute ... |
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Source: Brunato, Mauro - Dipartimento di Ingegneria e Scienza dell'Informazione, Università di Trento |
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Collection: Engineering ; Computer Technologies and Information Sciences |
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| 45 | The Origin and Evolution of the Genetic Code: Statistical and Experimental Investigations | ||
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Summary: statistical association between at least some codons and the RNA binding sites for their cognate amino acids... a simpler form. 2. The exact time of code optimization remains unclear, but measures of amino acids... in codon and amino acid usage can largely be ... |
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Source: Knight, Rob - Department of Chemistry and Biochemistry, University of Colorado at Boulder |
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Collection: Environmental Sciences and Ecology ; Biotechnology ; Biology and Medicine |
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| 46 | Fat and Protein Metabolism Break down of large | ||
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Summary: be modified to run through Kreb's! Proteins can be broken down to amino acids Which can be deaminated and run... Fatty acids New triglycerides Acetyl CoA 5-34 #12;9/16/2011 4 Amino Acid Metabolism Nitrogen (N... ) is ingested primarily as protein (i.e., amino groups ... |
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Source: Morrell, Thomas E. - Department of Biology, Ball State University |
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Collection: Environmental Sciences and Ecology |
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| 47 | BIOLOGICAL FRAMEWORKS FOR ENGINEERS Session #8 [nm: Genes, Decoding, and Mutations] | ||
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Summary: the amino acid sequence starting coding strand. DNA (5') G G A T A G C A T G A A A C C C G C A T A A (3... ') amino acid How would the amino acid sequence above change with the following changes (mutations... ') change amino ... |
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Source: Sniadecki, Nathan J. - Department of Mechanical Engineering, University of Washington at Seattle |
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Collection: Biology and Medicine ; Engineering |
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| 48 | BioMed Central Page 1 of 24 | ||
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Summary: of relationship between amino acids have mainly limited the application of formal language theory... quantitative properties of amino acids to deal with the size of the protein alphabet. Moreover, we imposed some... , where a correct gram- matical structure does not imply that a sentence is meaningful, not ... |
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Source: Nebel, Jean-Christophe - School of Computing and Information Systems, Kingston University |
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Collection: Computer Technologies and Information Sciences |
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| 49 | Systems Biology and Emerging Technologies TP53 Cancerous Mutations Exhibit Selection for | ||
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Summary: codon and mutation, mutations that result in the same amino acid substitution (e.g., from aspartic acid... is such that, for most amino acid substitutions, there is not more than one possible point mutation leading... between mutations result- ing in similar (but not necessarily ... |
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Source: Ruppin, Eytan - Departments of Computer Science & Physiology, Schools of Mathematics and Medicine, Tel Aviv University |
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Collection: Computer Technologies and Information Sciences |
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| 50 | Systems Biology and Emerging Technologies TP53 Cancerous Mutations Exhibit Selection for | ||
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Summary: compare, for each codon and mutation, mutations that result in the same amino acid substitution (e... , the nature of the genetic code is such that, for most amino acid substitutions, there is not more than one... ) amino acids. Two amino ... |
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Source: Sharan, Roded - School of Computer Science, Tel Aviv University; Tuller, Tamir - School of Computer Science, Tel Aviv University |
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Collection: Computer Technologies and Information Sciences |
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| 51 | Expanding the genetic code Only 20 amino acids are used in the biosynthesis of proteins | ||
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Summary: Expanding the genetic code Only 20 amino acids are used in the biosynthesis of proteins... no fundamental reason other amino acids cannot be used in proteins Chemical synthesis (with or without chemical... in the presence of selenomethionine would incorporate selMet in place of Met "Non-natural" ... |
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Source: Park, Sheldon - Department of Chemical and Biological Engineering, State University of New York at Buffalo |
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Collection: Biology and Medicine ; Biotechnology |
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| 52 | Prediction of Cell Penetrating Peptides by Support Vector Machines | ||
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Summary: 24 amino acids able to cross the lipid bi-layer membrane that serves as the cell's outer barrier and gain... approaches 14. The primary amino acid composition features, the number of a given amino acid and the percent... a given amino ... |
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Source: Mississippi State University, Center for Advanced Vehicular Systems (CAVS) |
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Collection: Engineering |
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| 53 | Evolutionarily Conserved Optimization of Amino Acid Biosynthesis | ||
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Summary: Evolutionarily Conserved Optimization of Amino Acid Biosynthesis Ethan O. Perlstein Æ Benjamin L... in evolutionary history the biosynthetic enzymes for amino acid x gradually lost residues of x, thereby reducing... the threshold for deleterious effects of x scarcity. The resulting reduction in cognate ... |
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Source: de Bivort, Benjamin - Rowland Institute at Harvard, Harvard University |
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Collection: Biology and Medicine |
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| 54 | Summary and concluding remarks Amino acid transport in Penicillium chrysogenum. Fungi are capable of | ||
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Summary: 103 Chapter 6 Summary and concluding remarks Summary Amino acid transport in Penicillium... chrysogenum. Fungi are capable of accumulating amino acids from their environment and use them as nitrogen and... /or carbon source or as building blocks for protein or peptide synthesis. Amino ... |
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Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution, |
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Collection: Biology and Medicine ; Environmental Sciences and Ecology |
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| 55 | A Feature-Based Approach to Discrimination and Prediction of Protein Folding Groups | ||
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Summary: in the sequence. Of four hundred features of amino acids available in the data base AAindex see Kawashima et al... feature spaces except for those directly related to amino acid sequence similarity data, and, second... of the classes labelled by their names, some by their numbers at the ... |
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Source: Mirkin, Boris - School of Computer Science and Information Systems, Birkbeck College, University of London |
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Collection: Computer Technologies and Information Sciences |
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| 56 | Icarus 145, 272281 (2000) doi:10.1006/icar.1999.6328, available online at http://www.idealibrary.com on | ||
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Summary: ://www.idealibrary.com on Racemization of Meteoritic Amino Acids Barbara A. Cohen Department of Planetary Sciences, University of Arizona... contributed amino acids to the prebiotic Earth, affecting the global ratio of right-handed to left-handed (D... /L) molecules. We calculate D/L ratios for seven ... |
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Source: Cohen, Barbara Anne - Institute of Meteoritics & Department of Earth and Planetary Sciences, University of New Mexico |
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Collection: Geosciences |
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| 57 | Purdue extension Animal Sciences | ||
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Summary: Lafayette, IN 47907 Protein and Amino Acid Requirements for Poultry by Todd J. Applegate - Purdue University... (CP) requirements are somewhat of a misnomer as the requirement is based on the amino acids content... of the protein. Once digested and absorbed, amino ... |
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Source: Purdue University, Department of Forestry and Natural Resources, Human-Environment Modeling and Analysis Laboratory |
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Collection: Environmental Sciences and Ecology |
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| 58 | Vol. 23 no. 24 2007, pages 32653275 BIOINFORMATICS REVIEW doi:10.1093/bioinformatics/btm471 | ||
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Summary: epitope loca- tions, 484 amino acid propensities from the AAindex database (http... of residues that are not adjacent in the primary structure (amino acid sequence), but are brought... may contain linear stretches of amino acids, and continuous ... |
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Source: Utrecht, Universiteit - Departement Biologie, Theoretical Biology/Bioinformatics Group |
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Collection: Biology and Medicine |
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| 59 | anti-1-Amino-2-[18F]fluorocyclobutane-1-carboxylic acid [anti-2-[18F]FACBC] | ||
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Summary: anti-1-Amino-2-[18F]fluorocyclobutane-1-carboxylic acid [anti-2-[18F]FACBC] Kam Leung, PhD National... : anti-1-Amino-2-[18 F]fluorocyclobutane-1- carboxylic acid Abbreviated name: anti-2-[18 F]FACBC Synonym... : Agent category: Compound Target: L-type amino acid ... |
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Source: Levin, Judith G. - Laboratory of Molecular Genetics, National Institutes of Health |
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Collection: Biology and Medicine |
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| 60 | Nucleic Acids Research, 2008, 113 doi:10.1093/nar/gkn619 | ||
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Summary: charac- teristics of a protein, such as amino acid content, hydrophobicity, side-chain mass and domain... , amino acid content, codon bias, hydrophobicity, side-chain mass and so on. During the training phase... -standard proteins whose localiza- tions are well known. To date, amino ... |
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Source: Ideker, Trey G.- Department of Bioengineering, University of California at San Diego |
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Collection: Biotechnology ; Biology and Medicine |
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| 61 | Probabilistic Context-Free Grammar for pattern detection | ||
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Summary: of the protein alphabet, we use quantitative properties of amino acids to reduce the number of rules... .........................................................................................10 1.4 Complexity of amino acid interactions ................................................12 1... ... |
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Source: Nebel, Jean-Christophe - School of Computing and Information Systems, Kingston University |
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Collection: Computer Technologies and Information Sciences |
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| 62 | New Methods towards the Synthesis of -Amino Acids | ||
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Summary: New Methods towards the Synthesis of -Amino Acids Barbara Weiner #12;The work described... ;RIJKSUNIVERSITEIT GRONINGEN New Methods towards the Synthesis of -Amino Acids Proefschrift ter verkrijging van het... Recent advances in the catalytic asymmetric synthesis of -amino ... |
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Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution, |
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Collection: Biology and Medicine ; Environmental Sciences and Ecology |
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| 63 | Protein & Peptide Letters, 2010, 17, 137-145 137 0929-8665/10 $55.00+.00 2010 Bentham Science Publishers Ltd. | ||
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Summary: ] Kawashima, S.; Pokarowski, P.; Pokarowska, M.; Kolinski, A.; Katayama, T.; Kanehisa, M. AAindex: amino acid... of the protein pairs. An alternative approach is to use amino acid sequence information alone to guide... and Cai [22a] proposed a method to predict PPIs in a hybridization ... |
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Source: Hefei Institute of Intelligent Machines - Intelligent Computing Lab |
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Collection: Computer Technologies and Information Sciences |
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| 64 | Renewable and nonrenewable resources: Amino acid turnover and allocation to reproduction | ||
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Summary: Renewable and nonrenewable resources: Amino acid turnover and allocation to reproduction... of carbon (GC combus- tion isotope ratio MS) to investigate the dietary sources of egg amino acids... predict that nonessential and essential amino acids correspond to these ... |
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Source: Boggs, Carol L. - Center for Conservation Biology, Stanford University; Wagner, Diane - Institute of Arctic Biology, Department of Biology and Wildlife, University of Alaska Fairbanks |
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Collection: Environmental Sciences and Ecology |
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| 65 | A Computational Pipeline for High-Throughput T-Cell Epitope Prediction | ||
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Summary: between amino acid binding contributions, while the linear programming technique explores the linearity... ofthe peptide's individual amino acids. Thus, one can consider each amino acid a in each position i... ) of a peptide with nine amino 9 ... |
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Source: Istrail, Sorin - Center for Computational Molecular Biology & Department of Computer Science, Brown University |
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Collection: Computer Technologies and Information Sciences ; Biology and Medicine |
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| 66 | Meteoritics & Planetary Science 39, Nr 11, 18491858 (2004) Abstract available online at http://meteoritics.org | ||
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Summary: ://meteoritics.org 1849 © Meteoritical Society, 2004. Printed in USA. Concentration and variability of the AIB amino acid... in polar micrometeorites: Implications for the exogenous delivery of amino acids to the primitive Earth G... and that they contain organic carbon. Since non-protein ... |
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|
Source: Matrajt, Graciela - Department of Astronomy, University of Washington at Seattle |
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Collection: Physics |
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| 67 | CHEM 4630 Biochemistry of Proteins March 23, 2010 Term Test-2 | ||
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Summary: are required for full marks. Be sure to show the structure of an activated amino acid and peptide bond... . D-amino acid oxidases found in the livers and kidneys of animals seem to function as detoxifying... agents for the removal of harmful D-amino acids. They ... |
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Source: O'Neil, Joe - Department of Chemistry, University of Manitoba |
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Collection: Biology and Medicine ; Chemistry |
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| 68 | Annales Geophysicae (2004) 22: 35833588 SRef-ID: 1432-0576/ag/2004-22-3583 | ||
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Summary: in 9 observato- ries around the world since the beginning of the 20th century, as well as the aa-index... series (Mayaud, 1972). Figure 1 gives an illustration of the semiannual variation of the aa-index. We... observatories. The amplitude of the 6-month line for the aa-index was found to follow a very similar trend up |
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|
Source: Ecole Polytechnique, Centre de mathématiques |
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Collection: Mathematics |
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| 69 | Comparison of sequence masking algorithms and the detection of biased protein sequence | ||
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Summary: sequences, and that the signal from randomized sequences with conserved local correlations and amino acid... : Influence of av- erage amino acid composition on hit distributions 0 10 20 30 40 50 region length... . pernix amino acid frequences random sequences with ... |
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Source: Kreil, David - Inference Group, Cavendish Laboratory, University of Cambridge |
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Collection: Physics |
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| 70 | Introduction to Bioinformatics A Systems Biology Approach | ||
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Summary: different properties of amino acids (e.g. volume and hydrophobicity) AAIndex: www.genome.ad.jp/dbget/aaindex... and functional characteristics from nucleotide and amino acid sequences Data-Driven approach rather than first... scheme) Such as the ... |
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|
Source: Rocha, Luis - School of Informatics, Indiana University |
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Collection: Computer Technologies and Information Sciences |
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| 71 | BIOLOGICAL FRAMEWORKS FOR ENGINEERS Session #5a [nm: Protein Form] | ||
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Summary: -molecular-weight, organic compound that consists of amino acids joined by peptide bonds and is essential to the structure... if there are many... Ionic bonds Hydrogen bonds Hydrophobic bonds van der Waals #12;ME498/599 IV. Amino Acids form... sequence in a gene and amino ... |
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Source: Sniadecki, Nathan J. - Department of Mechanical Engineering, University of Washington at Seattle |
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Collection: Biology and Medicine ; Engineering |
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| 72 | Predicting DNA-Binding Specificities of Eukaryotic Transcription Factors | ||
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Summary: amino acid sequences of more and more transcription factors (TFs) are readily available. Quantitative... amino acid sequences [19,20]. Applied to TFs these functional annotations may indicate what structural... and physicochemical properties. Most of those pairwise similarity features are derived from the ... |
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Source: Zell, Andreas - Wilhelm-Schickard-Institut für Informatik, Universität Tübingen |
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Collection: Computer Technologies and Information Sciences |
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| 73 | Journal of Biomolecular Structure & Dynamics, ISSN 0739-1102 | ||
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Summary: band of stoichiometric occurrences of amino-acids in primary sequences, regardless of the size... and the fold of a protein. We observe that "prefe- rential interactions" between amino-acids do not drive... amino-acid interactions, the backbones of folded proteins would be organized within the constraints |
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Source: Mittal, Aditya - School of Biological Sciences, Indian Institute of Technology, Delhi |
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Collection: Biotechnology ; Biology and Medicine |
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| 74 | Journal of Biomolecular Structure & Dynamics, ISSN 0739-1102 | ||
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Summary: is contained in its amino acid sequence (1). Currently with the extraordinary upsurge in computational hard... conserved motifs is to measure the amino acid sequence conservation from multiple sequence alignments... aligned protein structures by examining the conservation of amino ... |
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Source: |
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Collection: Computer Technologies and Information Sciences |
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| 75 | ! " # $ % " & ' " ( ) 0 # 1 % " & 2 # ! 3 4 5 6 # % " ) 7 ! 3 8 " & # 9 ! # @ 0 # 6 A B C D E F G B H F I P Q RI SI T RU D S V W B G RX F E Y D H ` a E T D H RU V W B G RX F E Y 3 b B Rc G D H H | ||
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Summary: Rc G D H H hD U hRS3 G D F R hP E R` i RH p q B Rc G D H H hD U hRS r s t u v uw u x v Amino acids... describes the physicochemical properties of amino acids and tries to shed light on their role... as the constituents of living cells, the proteins. -Amino acids are ... |
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Source: Kasher, Roni - Zuckerberg Institute for Water Research, Zuckerberg Institute for Water Research, Jacob Blaustein Institutes for Desert Research |
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Collection: Environmental Sciences and Ecology ; Environmental Management and Restoration Technologies |
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| 76 | Automatic Discovery of Protein Motifs Ninth International ACS Biotechnology Symposium | ||
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Summary: matrices, profiles, etc.) emphasize conservation of amino acids at specific sites in the sequence. Our... method looks for correlations between amino acid variations at distinct sites. Correlations between... the amino acids conserved during evolution. These ... |
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Source: Brutlag, Doug - Department of Biochemistry, Stanford University |
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Collection: Biology and Medicine |
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| 77 | A Test of Amino Acid Reversibility Nick G.C. Smith, Adam Eyre-Walker | ||
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Summary: A Test of Amino Acid Reversibility Nick G.C. Smith, Adam Eyre-Walker Centre for the Study... no evidence to reject the assumption of reversibility in protein evolution. Key words: Amino acid evolution... the evolution of proteins, it is generally assumed that the number of substitutions from ... |
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Source: Eyre-Walker, Adam - Department of Biology and Environmental Science, University of Sussex |
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Collection: Biology and Medicine |
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| 78 | BIOINFORMATICS Vol. 00 no. 00 2005 | ||
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Summary: . Aaindex: Amino acid index database. NAR, 27(1):368369, 1999. R. S. Kondor and J. Lafferty. Diffusion... - lar sequence, structure, surface clefts, chemical properties, amino acid motifs, interaction partners... contain certain motifs of amino ... |
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Source: Vishwanathan, S V N - Departments of Computer Sciences & Statistics, Purdue University |
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Collection: Computer Technologies and Information Sciences |
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| 79 | syn-1-Amino-3-[18F]fluorocyclobutane-1-carboxylic acid [syn-3-[18F]FACBC] | ||
|
Summary: syn-1-Amino-3-[18F]fluorocyclobutane-1-carboxylic acid [syn-3-[18F]FACBC] Kam Leung, PhD National... : syn-1-Amino-3-[18 F]fluorocyclobutane-1- carboxylic acid Abbreviated name: syn-3-[18 F]FACBC, syn-[18... F]FACBC Synonym: Agent category: Compound Target: L-type amino ... |
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Source: Levin, Judith G. - Laboratory of Molecular Genetics, National Institutes of Health |
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Collection: Biology and Medicine |
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| 80 | Nutrient Metabolism Whole-Body Nitrogen and Splanchnic Amino Acid Metabolism Differ in Rats | ||
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Summary: Nutrient Metabolism Whole-Body Nitrogen and Splanchnic Amino Acid Metabolism Differ in Rats Fed... Mixed Diets Containing Casein or Its Corresponding Amino Acid Mixture1 Maren Daenzer, Klaus Ju¨ rgen... , Scotland, UK ABSTRACT Whole-body and splanchnic metabolism of dietary amino ... |
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Source: Bequette, Brian J. - Department of Animal and Avian Sciences, University of Maryland at College Park |
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Collection: Biology and Medicine |
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| 81 | Amino acids equivalences within protein structures The original publication is available at www.springerlink.com | ||
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Summary: Amino acids equivalences within protein structures 1 The original publication is available at www... .springerlink.com A reduced amino acid alphabet for understanding and designing protein adaptation to mutation. C. Etchebest 1... , 75251 Paris, France Short title: Amino ... |
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Source: Ecole Polytechnique, Centre de mathématiques |
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Collection: Mathematics |
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| 82 | An empirical model of amino acid transformations in an alpine soil D.A. Lipson*, T.K. Raab, S.K. Schmidt, R.K. Monson | ||
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Summary: An empirical model of amino acid transformations in an alpine soil D.A. Lipson*, T.K. Raab, S... ; accepted 22 June 2000 Abstract Amino acids are potentially important nitrogen (N) sources for plants... ecosystems. This study estimates seasonal amino acid ¯uxes in an ... |
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Source: Colorado at Boulder, University of - Alpine Microbial Observatory |
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|
Collection: Environmental Sciences and Ecology |
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| 83 | e-publishing Received 17 April 2003 | ||
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Summary: feeding in the butterfly Heliconius charitonia: isotopic evidence for essential amino acid transfer from... in egg amino acids. The 13 C of individual amino acids from pollen, larval host plant and the eggs from... /C/IRMS), to evaluate amino ... |
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Source: Wagner, Diane - Institute of Arctic Biology, Department of Biology and Wildlife, University of Alaska Fairbanks |
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Collection: Environmental Sciences and Ecology |
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| 84 | Received 17 April 2003 Accepted 4 August 2003 | ||
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Summary: in the butterfly Heliconius charitonia: isotopic evidence for essential amino acid transfer from pollen to eggs... amino acids. The d 13 C of individual amino acids from pollen, larval host plant and the eggs from... /C/IRMS), to evaluate amino ... |
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|
Source: Boggs, Carol L. - Center for Conservation Biology, Stanford University |
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Collection: Environmental Sciences and Ecology |
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| 85 | 3/8/2011 CAP5510 / CGS5166 1 CAP 5510: Introduction to Bioinformatics! | ||
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Summary: 2 Protein Structures! Sequences of amino acid residues 20 different amino acids Primary Quaternary... Proteins! Primary structure is the sequence of amino acid residues of the protein, e.g., Flavodoxin... 5510 / CGS5166 9 Amino ... |
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Source: Narasimhan, Giri - School of Computer Science, Florida International University |
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Collection: Computer Technologies and Information Sciences |
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| 86 | Ecology, 90(12), 2009, pp. 35263535 2009 by the Ecological Society of America | ||
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Summary: fingerprinting: a novel method for identifying plant, fungal, or bacterial origins of amino acids THOMAS LARSEN... of Biology and Wildlife, University of Alaska, Fairbanks, Alaska 99775-7000 USA Abstract. Amino acids play... . Here we present a new approach to tracing the origins of amino ... |
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Source: Wagner, Diane - Institute of Arctic Biology, Department of Biology and Wildlife, University of Alaska Fairbanks |
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Collection: Environmental Sciences and Ecology |
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| 87 | Chemistry of Life Reading: Ch 4 | ||
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Summary: molecules are long made of long chains of amino acids 26 #12;Amino acids are a family of similar... molecules There are 20 different types of amino acids in proteins 27 #12;A protein is a chain of amino... "balled" up. 29 #12;Beads are to ... |
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Source: Kalinowski, Steven T - Department of Ecology, Montana State University |
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Collection: Environmental Sciences and Ecology |
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| 88 | The Astrophysical Journal, 550:L95L99, 2001 March 20 2001. The American Astronomical Society. All rights reserved. Printed in U.S.A. | ||
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Summary: . All rights reserved. Printed in U.S.A. THE PHOTOSTABILITY OF AMINO ACIDS IN SPACE P. Ehrenfreund,1 M... led to life's origin. Among these compounds, amino acids may have played a crucial role since... laboratory studies testing the stability of amino acids against ... |
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Source: NASA Ames Research Center, Astrochemistry Laboratory |
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Collection: Physics |
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| 89 | Mol. Biol. Evol. 19(1):5867. 2002 2002 by the Society for Molecular Biology and Evolution. ISSN: 0737-4038 | ||
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Summary: : 0737-4038 Protein Structure, Neighbor Effect, and a New Index of Amino Acid Dissimilarities Xuhua Xia... 's Republic of China Amino acids interact with each other, especially with neighboring amino acids... , to generate protein structures. We studied the pattern of ... |
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Source: Xia, Xuhua - Department of Biology, University of Ottawa |
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Collection: Biology and Medicine |
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| 90 | Re-examination of amino acids in Antarctic micrometeorites D.P. Glavin a,*, G. Matrajt b,c | ||
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Summary: Re-examination of amino acids in Antarctic micrometeorites D.P. Glavin a,*, G. Matrajt b,c , J... February 2003 Abstract The delivery of amino acids by micrometeorites to the early Earth during the period... atmospheric deceleration, causing the amino acids to ... |
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Source: Matrajt, Graciela - Department of Astronomy, University of Washington at Seattle |
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Collection: Physics |
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| 91 | Molecular Cell, Vol. 18, 141148, April 15, 2005, Copyright 2005 by Elsevier Inc. DOI 10.1016/j.molcel.2005.03.023 Thus, phosphorylation of eIF2 by GCN2 in starved | ||
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Summary: inhibits protein synthesis and limits consumption for Amino Acids of amino acids. In addition to reducing... activates amino acid biosynthesis. Two both binds to promoters and activates transcription of recent studies... lacking essential amino ... |
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|
Source: Lycan, Deborah E. - Department of Biology, Lewis and Clark College |
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Collection: Biology and Medicine |
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| 92 | 1998 Oxford University Press23062312 Nucleic Acids Research, 1998, Vol. 26, No. 10 Quantitative parameters for amino acidbase | ||
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Summary: parameters for amino acidbase interaction: implications for prediction of proteinDNA binding sites Yael... ; Accepted March 21, 1998 ABSTRACT Inspection of the amino acidbase interactions in proteinDNA complexes... for amino acidbase interaction based on ... |
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Source: Mandel-Gutfreund, Yael - Department of Biology, Technion, Israel Institute of Technology |
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Collection: Biology and Medicine |
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| 93 | Due Date: Monday, May 30, 2011, 11:55PM Spring 2010-2011 | ||
|
Summary: Assignment about Protein Structures Finding interacting amino acids between chains of a multi-chain protein... In this assignment, you are going to implement a program to find the amino acids at the interface of different chains... Data Bank) file and a distance threshold. The input protein structure will ... |
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|
Source: Can, Tolga - Department of Computer Engineering, Middle East Technical University |
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Collection: Computer Technologies and Information Sciences |
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| 94 | Biochemical Characterization -Amino Acid Ester Hydrolases | ||
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Summary: Biochemical Characterization of -Amino Acid Ester Hydrolases #12;The cover picture... is a photomicrograph of amoxicillin crystals, one of the antibiotics the -amino acid ester hydrolases can make... ;Rijksuniversiteit Groningen Biochemical Characterization of -Amino ... |
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|
Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution, |
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Collection: Biology and Medicine ; Environmental Sciences and Ecology |
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| 95 | New insights into coiled coil formation by means of support vector Ingrid G. Abfalter1* | ||
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Summary: on the basis of their amino acid sequences. The data set for this classification task was collected... then extract important features like specific amino acids at certain key positions or amino acid patterns... that are characteristic for each type of oligomer. ... |
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Source: Hochreiter, Sepp - Institute of Bioinformatics, Johannes Kepler Universität Linz |
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Collection: Biology and Medicine ; Computer Technologies and Information Sciences |
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| 96 | Bioinformatic approach to identify penultimate amino acids efficient for N-terminal methionine excision | ||
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Summary: Bioinformatic approach to identify penultimate amino acids efficient for N-terminal methionine... (NME). While it is known that the penultimate amino acid affects the efficiency of NME in several... bacterial and eukaryotic species, it is experimentally difficult and tedious to verify which ... |
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Source: Xia, Xuhua - Department of Biology, University of Ottawa |
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Collection: Biology and Medicine |
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| 97 | Plasma amino acid concentrations in healthy elderly men and women 1,2 | ||
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Summary: Plasma amino acid concentrations in healthy elderly men and women 1,2 Benjamin Caballero, Ray E... of plasma amino acid concentrations from female subjects re- vealed a significant and positive effect of age... or methionine. Tryptophan was the only amino acid to ... |
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Source: Wurtman, Richard - Department of Brain and Cognitive Science, Massachusetts Institute of Technology (MIT) |
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Collection: Biology and Medicine |
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| 98 | Monatshefte fur Chemie 131, 667672 (2000) Beauveria bassiana ATCC 7159 Contains | ||
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Summary: acids by the fungus Beauveria bassiana ATCC 7159 results in isolation of the corresponding D-amino acid... benzamides in high enantiomeric purity and yield. Keywords. Amino acid; Beauveria bassiana; Biocatalysis... of carboxylic acid ester [2] or ... |
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Source: Andreana, Peter R. - Department of Chemistry, Wayne State University |
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Collection: Chemistry |
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| 99 | PcMtr, an aromatic and neutral aliphatic amino acid permease of Penicillium chrysogenum | ||
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Summary: 79 Chapter 4 PcMtr, an aromatic and neutral aliphatic amino acid permease of Penicillium... Biophysica Acta Abstract The gene encoding an aromatic and neutral aliphatic amino acid permease... , and unrelated to the amino acid permease (AAP) family which includes most ... |
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|
Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution, |
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Collection: Biology and Medicine ; Environmental Sciences and Ecology |
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| 100 | BioMed Central Page 1 of 11 | ||
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Summary: Research article Evolution of proteomes: fundamental signatures and global trends in amino acid compositions Fredj... characterization of proteomes at the amino acids composition level. Results: In this work, amino acid compositions... and ... |
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|
Source: Ecole Polytechnique, Centre de mathématiques |
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|
Collection: Mathematics |
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