| Sample search results for: a-i mimetic peptides |
| 1 | Miniaturized proteins: the backbone cyclic proteinomimetic approach. The field of proteinomimetics utilizes peptide-based molecules to mimic | ||
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Summary: of proteinomimetics utilizes peptide-based molecules to mimic native protein functions. We describe a novel general... method for mimicking proteins by small cyclic peptides for the purpose of drug design, and demonstrate... its applicability on bovine pancreatic trypsin inhibitor (BPTI). These unique cyclic peptides, which |
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Source: Kasher, Roni - Zuckerberg Institute for Water Research, Zuckerberg Institute for Water Research, Jacob Blaustein Institutes for Desert Research |
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Collection: Environmental Sciences and Ecology ; Environmental Management and Restoration Technologies |
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| 2 | A Mimetic Iterative Scheme for Solving Biharmonic Equations | ||
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Summary: ]. An application of Green-Gauss-Stokes theorem (13) shows that the mimetic Helmholtz operator, (-D·G+aI+B ·G... 's condition, u/n + u = 0 with > 0, as the following expression (-D · G + aI + B · G + )uh = fh. (17) 6 #12;In... A Mimetic Iterative Scheme for Solving Biharmonic Equations A. ... |
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Source: Raydan, Marcos - Escuela de Computación, Universidad Central de Venezuela |
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Collection: Mathematics |
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| 3 | Biol. Lett. (2007) 3, 463466 doi:10.1098/rsbl.2007.0234 | ||
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Summary: 0 6 4 2 0 6 4 2 0 6 4 2 0 1.0 0.5 1.0 0.5 1.0 time (s) frequency(kHz) (a) (i) (ii) (iii) (iv) (v) (b... behaviour Female preferences drive the evolution of mimetic accuracy in male sexual displays Seth William... of interspecific vocal mimicry is unclear. Here we use spectrographic cross-correlation to compare ... |
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Source: Borgia, Gerald - Department of Biology, University of Maryland at College Park; Patricelli, Gail - Section of Evolution and Ecology, University of California, Davis |
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Collection: Biology and Medicine ; Environmental Sciences and Ecology |
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| 4 | Synthesis of tripeptides as potent Yersinia protein tyrosine phosphatase inhibitors | ||
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Summary: displayed in an EGFR-derived peptide platform ÔAc-Asp-Ala-Asp-Glu- Xxx-Leu-NH2Õ (where Xxx = pTyr mimetic... , TEA, DMAP, AcCN; (b) LiOH, THF:H2O = 1:1. Scheme 2. Reagents: (a) i--NaN3, DMF; ii--H2, 10% Pd/C, 35... Tyr mimetics 2224 were examined. Peptides with ... |
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Source: Wlodawer, Alexander - Macromolecular Crystallography Laboratory, National Cancer Institute |
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Collection: Chemistry ; Biology and Medicine |
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| 5 | a g Hybrid Peptides that Contain the Conformationally Constrained Gabapentin Residue: Characterization of Mimetics of Chain Reversals | ||
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Summary: structures. Keywords: amino acids ¥ beta-turn mimetics ¥ hydrogen bonds ¥ peptides ¥ structure elucidation... . J. 2003, 9, 4789 ± 47954794 mimetics in an a ± g peptide sequence. The possibility of extending... . DeGrado, Chem. Rev. 2001, 101, 3219 ± 3232; g) D. L. Steer, R. A. Lew, P. Perlmutter, ... |
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Source: Balaram , P. - Molecular Biophysics Unit, Indian Institute of Science, Bangalore |
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Collection: Biology and Medicine |
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| 6 | Current Protein and Peptide Science, 2005, 6, 000-000 1 1389-2037/05 $50.00+.00 2005 Bentham Science Publishers Ltd. | ||
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Summary: properties of this particular peptide [66]. 3. COLORIMETRIC BIO-MIMETIC MEMBRANE ASSEMBLIES A recent... Current Protein and Peptide Science, 2005, 6, 000-000 1 1389-2037/05 $50.00+.00 © 2005 Bentham... Science Publishers Ltd. Membrane Interactions of Host-defense Peptides Studied in Model Systems Raz |
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Source: Jelinek, Raz - Department of Chemistry, Ben-Gurion University |
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Collection: Chemistry ; Biology and Medicine |
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| 7 | Protein Science (1998), 7:123-131. Cambridge University Press. Printed in the USA. Copyright 0 1998 The Protein Society | ||
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Summary: -H-H-H-H-H-H-H-H-H L-Q-M-N-K-K-D-M-V-A-I-K-H-L-L-S-E H-H-H-H-H-H-H-H-B-B-B-B-B-B-B-H-H H-H-H-H-H-H-H-H... ,Gierasch LM. 1993. Conformational behavior of Escherichia coli omp A signal peptides in membrane mimetic... The Protein Society Folded conformations of antigenic peptides from riboflavin carrier protein ... |
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Source: Balaram , P. - Molecular Biophysics Unit, Indian Institute of Science, Bangalore |
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Collection: Biology and Medicine |
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| 8 | Molecules 2011, 16, 774-789; doi:10.3390/molecules16010774 ISSN 1420-3049 | ||
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Summary: biotin and sugar mimetics. However, the full "mimicry" of these peptides has not yet been fully... mimetic. If the natural ligand is a small-molecule then the phage-selected peptides are mimics... - molecules and their mimetic peptides are often very different ... |
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Source: Orner, Brendan Patrick - Division of Chemistry and Biological Chemistry, Nanyang Technological University |
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Collection: Biology and Medicine ; Chemistry |
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| 9 | Reversible SheetTurn Conformational Change of a Cell-Penetrating Peptide in Lipid Bilayers Studied by | ||
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Summary: correlation spectra of labeled penetratin in DMPC/DMPG membranes (8:7) at P/L=1:15. (a) (I5, Q8, K13)-labeled... conformational change. The turn/sheet intensity ratios, Keq, are plotted as a function of temperature. (a) I3. (b... , 5363. 43. Yao, X. L. & Hong, M. (2004). Structural distribution in an ... |
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Source: Hong, Mei - Department of Chemistry, Iowa State University |
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Collection: Chemistry |
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| 10 | A Novel Substrate Mimetic Inhibitor of PKB/Akt Inhibits Prostate Cancer Tumor Growth in Mice by Blocking the PKB Pathway | ||
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Summary: peptide substrate mimetic inhibitor of protein kinase B (PKB/ Akt). The compound selectively kills... of a substrate mimetic PKB inhibitor. Previous attempts to convert substrate peptides into inhibitors using... , we have overcome these limitations by chemically modifying the peptide ... |
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Source: Levitzki, Alexander - Department of Biological Chemistry, Hebrew University of Jerusalem |
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Collection: Biology and Medicine |
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| 11 | MaterialsScienceandEngineeringDepartmentSpecialSeminar 12:00 p.m. Thursday, February 10, 2011 | ||
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Summary: systems involving de novo designed peptide and peptido- mimetics, block copolymers and nanoparticles... of Illinois at Urbana-Champaign www.matse.illinois.edu Hybrid Biomaterials Based on Peptide-Polymer Conjugates... that will be critical to mimic materials found in nature. Bio-inspired building blocks, such as ... |
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Source: Shim, Moonsub - Department of Materials Science and Engineering, University of Illinois at Urbana-Champaign |
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Collection: Materials Science |
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| 12 | Letters in Peptide Science 5: 101103, 1998. KLUWER/ESCOM | ||
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Summary: Letters in Peptide Science 5: 101103, 1998. KLUWER/ESCOM © 1998 Kluwer Academic Publishers... . Printed in the Netherlands. 101 LIPS 257 Synthesis of a bicyclic BPTI mimetic containing 4-thioproline... 1997 Key words: backbone cyclic peptides, bovine pancreatic trypsin inhibitor, BPTI, peptidomimetic |
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Source: Kasher, Roni - Zuckerberg Institute for Water Research, Zuckerberg Institute for Water Research, Jacob Blaustein Institutes for Desert Research |
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Collection: Environmental Sciences and Ecology ; Environmental Management and Restoration Technologies |
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| 13 | Available online at www.sciencedirect.com Peptides and peptidomimetics as prototypes | ||
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Summary: ] and b-sheet [2] by smart modeling, the use of peptides and their mimetics has been a highly fruitful... opinions from established scientists who have helped to shape research on peptides and their mimetics over... Available online at www.sciencedirect.com Peptides and peptidomimetics as ... |
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Source: Raines, Ronald T. - Departments of Biochemistry & Chemistry, University of Wisconsin at Madison |
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Collection: Chemistry ; Biology and Medicine |
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| 14 | Influence of Lysine N -Trimethylation and Lipid Composition on the Membrane Activity of | ||
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Summary: of the Cecropin A-Melittin Hybrid Peptide CA(1-7)M(2-9) Vitor Teixeira,,§ Maria J. Feio,§ Luis Rivas,| Beatriz G... studies have pointed out the promising role of antimicrobial peptides (AMPs) as therapeutical agents... , their translation into clinical research is being slow due to the limitations intrinsic to their peptide ... |
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Source: Pompeu Fabra, Universitat - Departament de Ciències Experimentals i de la Salut, Proteomics and Protein Chemistry Unit |
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Collection: Biotechnology |
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| 15 | New syntheses of tetrazolylmethylphenylalanine and O-malonyltyrosine as pTyr mimetics for the design of STAT3 | ||
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Summary: New syntheses of tetrazolylmethylphenylalanine and O- malonyltyrosine as pTyr mimetics... the pTyr-binding pocket of the STAT3 SH2 domain led us to develop a novel synthesis of two pTyr mimetics... dimerization identified L-OMT as the first nonphosphorus pTyr mimetic so far reported against STAT3 SH2 domain |
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Source: Ecole Polytechnique, Centre de mathématiques |
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Collection: Mathematics |
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| 16 | Peptide-and Aptamer-Functionalized Nanovectors for Targeted | ||
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Summary: -angiogenic cancer-targeted deliveryo Collagen-mimetic peptide Cancer-targeted deliveryp P0 immunoglobin derived... with doxorubicin inhibited growth by 66% 83 . Collagen-mimetic peptides have been developed to target the CD44... with the collagen IV-mimetic peptide ... |
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Source: Kokkoli, Efie - Department of Chemical Engineering and Materials Science, University of Minnesota |
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Collection: Materials Science |
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| 17 | General introduction: Peptides as a promising source of therapeutic agents | ||
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Summary: an adequate chemical modification. Since the number of peptides and peptide mimet- ics to choose from... #12;General introduction: Peptides as a promising source of therapeutic agents Marcelo F. Masman C1... knowledge of synthetic amino acids, peptides and peptidomi- metic compounds. The ... |
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Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution, |
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Collection: Biology and Medicine ; Environmental Sciences and Ecology |
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| 18 | Self-assembly and applications of biomimetic and bioactive peptide-amphiphiles | ||
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Summary: to unique fibronectin-mimetic peptide sequences. Ashish Garg Jennifer A. Craig 1016 | Soft Matter, 2006, 2... on the self-assembly of model collagen mimetic peptide-amphiphiles.43 They con- nected a (Gly-Pro-Hyp)4-[IV-H1... -helical collagen- mimetic (Gly-Pro-Hyp)4-[IV-H1] ... |
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Source: Kokkoli, Efie - Department of Chemical Engineering and Materials Science, University of Minnesota |
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Collection: Materials Science |
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| 19 | The inability of lactic acid bacteria to synthesize a large number of amino acids necessitates the presence of a proteolytic system in those environments where protein is the | ||
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Summary: in the presence of various peptides or peptide mimetics (Chapter 4). The results showed that the DtpT protein... in three compartments: an extracellularly located proteinase, three membrane-bound peptide transporters... and utilization of peptides in L.lactis. The sequence of events in ... |
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Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution, |
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Collection: Biology and Medicine ; Environmental Sciences and Ecology |
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| 20 | A synthetic peptide with estrogen-like activity derived from a phage-display peptide library | ||
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Summary: activity in rat tissues in vivo. This approach can be employed to design peptide mimetic for other hormones... as well. © 2002 Elsevier Science Inc. All rights reserved. Keywords: Steroid-mimetic peptides; Monoclonal... in the past decade to identify short peptide ... |
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Source: Kasher, Roni - Zuckerberg Institute for Water Research, Zuckerberg Institute for Water Research, Jacob Blaustein Institutes for Desert Research |
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Collection: Environmental Sciences and Ecology ; Environmental Management and Restoration Technologies |
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| 21 | Protein Farnesyltransferase from Trypanosoma brucei A HETERODIMER OF 61-AND 65-kDa SUBUNITS AS A NEW TARGET FOR ANTIPARASITE THERAPEUTICS* | ||
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Summary: those against mammalian PFT and PGGT-I (Table II). The non-peptide CaaX mimetic SCH-44342 is 2 orders... ., Gibbs, J. B., Graham, S. L., Hartman, G. D., Oliff, A. I., and Smith, R. L. (1996) J. Med. Chem. 39... to T. brucei PFT with sub-micromolar affinity, and affin- ity chromatography using this ... |
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Source: Gelb, Michael - Departments of Chemistry & Biochemistry, University of Washington at Seattle |
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Collection: Chemistry ; Biology and Medicine |
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| 22 | Non-natural, sequence-specific peptidomimetic oligomers are being designed to mimic bioactive peptides, with potential | ||
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Summary: peptides, with potential therapeutic application. Cationic, facially amphipathic helical -peptide oligomers... have been developed as magainin mimetics. Non-natural mimics of HIV-Tat protein, lung surfactant... proteins, collagen, and somatostatin are also being developed. Pseudo-tertiary structure in ... |
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Source: Barron, Annelise E. - Department of Bioengineering, Stanford University |
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Collection: Materials Science ; Biotechnology |
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| 23 | Development of a Potent Bcl-xL Antagonist Based on r-Helix Mimicry Olaf Kutzki, Hyung Soon Park, Justin T. Ernst, Brendan P. Orner, Hang Yin, and | ||
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Summary: .edu. Figure 1. (A) i, i + 3, and i + 7 substituents of an R-helix. (B) Compounds tested in the fluorescence... . 2001, 3, 173-182. (b) Lugovskoy, A. A.; Degterev, A. I.; Fahmy, A. F.; Zhou, P.; Gross, J. D.; Yuan, J... -helix. We have synthesized several designed proteo- mimetics based on ... |
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Source: Orner, Brendan Patrick - Division of Chemistry and Biological Chemistry, Nanyang Technological University |
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Collection: Biology and Medicine ; Chemistry |
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| 24 | Current Protein and Peptide Science, 2010, 11, 000-000 1 1389-2037/10 $55.00+.00 2010 Bentham Science Publishers Ltd. | ||
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Summary: Current Protein and Peptide Science, 2010, 11, 000-000 1 1389-2037/10 $55.00+.00 © 2010 Bentham... Abstract: The growing interest in membrane interactions of amyloidogenic peptides and proteins emanates... binding of amyloidogenic peptides and amyloid peptide association with cellular membranes is critical |
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Source: Jelinek, Raz - Department of Chemistry, Ben-Gurion University |
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Collection: Chemistry ; Biology and Medicine |
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| 25 | Design, Synthesis, and Evaluation of Peptides with | ||
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Summary: , VSWFFE (EMP-1) and VSWFFED (EMP-2) (EMP: estrogen-mimetic peptide), bind mAb-E2 with high affinity (IC50... . Biopolymers (Pept Sci) 76: 404420, 2004 Keywords: estrogen-mimetic peptides; estrogen receptor alpha... peptide VSWFFE (EMP-1) and a 7-residue peptide ... |
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Source: Kasher, Roni - Zuckerberg Institute for Water Research, Zuckerberg Institute for Water Research, Jacob Blaustein Institutes for Desert Research |
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Collection: Environmental Sciences and Ecology ; Environmental Management and Restoration Technologies |
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| 26 | Mater. Res. Soc. Symp. Proc. Vol. 1346 2011 Materials Research Society DOI: 10.1557/opl.2011.1002 | ||
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Summary: of a patient during therapy is unmet. A bead-based assay with peptide antigen mimetics has been developed... . Alemtuzumab (anti-CD52) and rituximab (anti-CD20) antigen mimetic peptides, as discovered by phage display... this detection limit was the implementation of a compensation scheme where two antigen ... |
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Source: Kummel, Andrew C. - Department of Chemistry and Biochemistry, University of California at San Diego |
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Collection: Chemistry |
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| 27 | Molecular dynamics simulations of peptides on a hydrophilic- | ||
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Summary: Chapter 4 Molecular dynamics simulations of peptides on a hydrophilic- hydrophobic interface #12... . As a start here we focus on the interaction of peptides with bilayers. A wide range of surface active... peptides have been described in the literature. For example, certain peptides are known to undergo |
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Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution, |
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Collection: Biology and Medicine ; Environmental Sciences and Ecology |
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| 28 | Miniaturized Proteins: The Backbone Cyclic Proteinomimetic Approach | ||
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Summary: (Laskowski, Jr & Kato, Figure 2. Structure of the BPTI mimetic backbone bi- cyclic peptide library. The disul... than that of the best BC BPTI mimetic (peptide 16, Ki 4.0 mM). This discrepancy may be due... mimetic containing 4- thioproline replacing Cys38 . Letters ... |
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Source: Kasher, Roni - Zuckerberg Institute for Water Research, Zuckerberg Institute for Water Research, Jacob Blaustein Institutes for Desert Research |
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Collection: Environmental Sciences and Ecology ; Environmental Management and Restoration Technologies |
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| 29 | Effect of Linker and Spacer on the Design of a Fibronectin-Mimetic Peptide Evaluated via Cell Studies and AFM Adhesion Forces | ||
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Summary: Effect of Linker and Spacer on the Design of a Fibronectin-Mimetic Peptide Evaluated via Cell... , 2007. ReVised Manuscript ReceiVed March 11, 2008 The design of a fibronectin-mimetic peptide... for the rational design of any protein-mimetic peptide with two binding ... |
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Source: Kokkoli, Efie - Department of Chemical Engineering and Materials Science, University of Minnesota |
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Collection: Materials Science |
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| 30 | Post-translational modification of the therapeutic peptides by NisB, the dehydratase of the lantibiotic nisin | ||
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Summary: for the regulation of the production of red blood cells. We selected an EPO peptide mimetic (EMP1) of 13 amino acids... Post-translational modification of the therapeutic peptides by NisB, the dehydratase... in the activity and receptor specificity of biologically active peptides. In addition, a dehydroamino ... |
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Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution, |
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Collection: Biology and Medicine ; Environmental Sciences and Ecology |
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| 31 | Tripeptide Inhibitors of Yersinia Protein-Tyrosine Phosphatase Kyeong Lee,a | ||
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Summary: -Bn esters. As shown in Table 1, peptides 12, 13, and 15 that con- tain dicarboxy-based pTyr mimetics as well... , respectively. Surprisingly, dicarboxy pTyr mimetic-containing tri- peptides 14, 16, and 17 that previously... . Although discrepancies in PTP1B inhibitory potencies for pTyr ... |
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Source: Wlodawer, Alexander - Macromolecular Crystallography Laboratory, National Cancer Institute |
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Collection: Chemistry ; Biology and Medicine |
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| 32 | DOI: 10.1021/la902571q 1953Langmuir 2010, 26(3), 19531959 Published on Web 10/30/2009 pubs.acs.org/Langmuir | ||
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Summary: .acs.org/Langmuir © 2009 American Chemical Society Self-Assembly of Fibronectin Mimetic Peptide-Amphiphile Nanofibers... -binding motifs are promising as tissue engineering scaffolds. A fibronectin-mimetic peptide sequence... frequentlychoosetodesign a mimetic peptide ... |
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Source: Kokkoli, Efie - Department of Chemical Engineering and Materials Science, University of Minnesota |
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Collection: Materials Science |
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| 33 | Self association of the EPO mimetic Proteins are known to fold on a time scale ranging from ms to seconds or even | ||
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Summary: 13 Chapter 2 Self association of the EPO mimetic peptide 1 Proteins are known to fold on a time... their lowest free energy conformation. In this chapter, the self association of the EPO mimetic peptide 1... association of the EPO mimetic peptide 1 #12;2.1. ... |
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Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution, |
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Collection: Biology and Medicine ; Environmental Sciences and Ecology |
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| 34 | Choosing membrane mimetics for NMR structural studies of transmembrane proteins Dror E. Warschawski a,b, | ||
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Summary: Review Choosing membrane mimetics for NMR structural studies of transmembrane proteins Dror E... March 2011 Available online 6 April 2011 Keywords: Membrane protein NMR Membrane mimetics Detergents... studies, an incredibly large number of membrane mimetics options are available. This review provides |
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Source: Institut de Biologie Physico-Chimique CNRS, Physico-Chimie Moléculaire des Membranes Biologiques |
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Collection: Chemistry ; Biology and Medicine |
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| 35 | Inhibition of HIV-1 virus replication using small soluble Tat peptides Emmanuel Agbottah a | ||
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Summary: Inhibition of HIV-1 virus replication using small soluble Tat peptides Emmanuel Agbottah... /44 peptide from the core domain can inhibit HIV-1 gene expression and replication. The peptides are not toxic... the Cdk2 X-ray crystallography structure, we found that the low-energy wild-type peptides could bind |
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Source: Zeng, Chen - Department of Physics, George Washington University |
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Collection: Physics |
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| 36 | Roles of Arginine and Lysine Residues in the Translocation of a Cell-Penetrating Peptide F Solid-State NMR | ||
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Summary: 19 F-19 F distances of 6.0, 9.7, and 10 A° , I5R-Q8 and I5R-K13R distances of <6.0 A° , RN... in an Elastin-Mimetic Peptide (VPGVG)3 Investigated by Solid-State NMR. J. Am. Chem. Soc. 126, 41994210. 46... Roles of Arginine and Lysine Residues in the Translocation of a Cell-Penetrating ... |
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Source: Hong, Mei - Department of Chemistry, Iowa State University |
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Collection: Chemistry |
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| 37 | High Affinity Ligand Binding by Integrins Does Not Involve Head Separation* | ||
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Summary: dissociated wild type IIb 3 on the cell surface, a ligand-mimetic Arg-Gly-Asp peptide did not, as judged... subunit. A crystal structure with a bound ligand-mimetic peptide revealed that ligand binds... Head Separa- tion--We used the AP2 and 10E5 mAbs to determine whether RGD-mimetic ... |
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Source: Springer, Timothy A. - Immune Disease Institute & Department of Pathology, Harvard University |
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Collection: Biology and Medicine |
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| 38 | BioMed Central Page 1 of 14 | ||
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Summary: , a BLV LHR-mimetic peptide antagonized BLV envelope-mediated membrane fusion but failed to inhibit HTLV-1... are inhibitory to envelope-mediated mem- brane fusion. Prototypic -helical TM-mimetic inhibitory peptides have... interaction of the HTLV-1 LHR-mimetic ... |
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Source: van Aalten, Daan - Division of Biological Chemistry and Molecular Microbiology, University of Dundee |
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Collection: Biology and Medicine |
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| 39 | Kinetics and Substrate Specificity of Membrane-reconstituted Peptide Transporter DtpT of Lactococcus lactis | ||
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Summary: peptides or peptide mimetics. The DtpT protein appears to be specific for di- and tripeptides... of the peptide backbone, as well as for peptide mimetics. MATERIALS AND METHODS Material. All peptides were... of the peptide ... |
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Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution, |
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Collection: Biology and Medicine ; Environmental Sciences and Ecology |
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| 40 | Therapeutic Index of Gramicidin S is Strongly Modulated by D-Phenylalanine Analogues at the Concepcion Solanas, | ||
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Summary: Ved July 17, 2008 Analogues of the cationic antimicrobial peptide gramicidin S (GS), cyclo... the development of new antimicrobial chemotherapy approaches. A number of peptides with antimicrobial activity... multidrug resistant bacteria. An attractive feature of these peptides is that, by acting mostly through |
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Source: Pompeu Fabra, Universitat - Departament de Ciències Experimentals i de la Salut, Proteomics and Protein Chemistry Unit |
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Collection: Biotechnology |
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| 41 | WCBSURC 2007 Poster Sessions Poster Session I Odd-numbered posters, 11:35am 12:35pm | ||
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Summary: TO APOLIPOPROTEIN A-I MIMETIC PEPTIDES. Garrett Perrin* (Mohamad Navab, Greg Hough), University of California, Los... ., Long Beach, CA 90840. P29. APOA-1 MIMETIC PEPTIDE D-4F INCREASES PARAOXONASE ACTIVITY. Dien Tran* (Greg... Rockville Pike, Bethesda, MD 20892. #12;18 P36. APOA-1 ... |
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Source: Dahlquist, Kam D. - Biology Department, Loyola Marymount University |
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Collection: Biology and Medicine |
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| 42 | Production and Utilization of Peptides in Lactococcus lactis | ||
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Summary: for the binding protein DppA: (i) a high affinity for di- and tripeptides; (ii) a requirement for a free N... Production and Utilization of Peptides in Lactococcus lactis #12;II To my mother, Jianjun LI (1933... -1983). Cover: Production and utilization of peptides in Lactococcus lactis Cover design: Gang FANG ... |
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Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution, |
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Collection: Biology and Medicine ; Environmental Sciences and Ecology |
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| 43 | Structure and Function of Integral Membrane Protein | ||
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Summary: Structure and Function of Integral Membrane Protein Domains Resolved by Peptide... September 2002; accepted 19 December 2002 Abstract: We have used synthetic lipidated peptides ("peptide... -fluorenylmethyl- oxycarbonyl (Fmoc) solid-phase peptide synthesis to prepare full-length phospholamban (PLB1 |
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Source: Thomas, David D. - Departments of Biochemistry, Molecular Biology, & Biophysics, University of Minnesota |
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Collection: Biology and Medicine |
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| 44 | Interaction of a two-transmembrane-helix peptide with lipid bilayers and dodecyl sulfate micelles | ||
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Summary: simulations of phospholipids, J Phys Chem B, 104 (2000) 7510-7515. [32] K.V. Pervushin, V. Orekhov, A.I. Popov... 1 Interaction of a two-transmembrane-helix peptide with lipid bilayers and dodecyl sulfate micelles... the peptide was transferred to SDS. MD simulation showed no evidence for significant disruption of helix |
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Source: Chen, Liao Y. - Department of Physics and Astronomy, University of Texas at San Antonio |
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Collection: Physics |
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| 45 | Project Title: Metathesis in biological systems. | ||
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Summary: of nature's amino acids, peptides, and bioconjugate in solution and on surfaces (see below). The ability... extended to cross metathesis dimerization to provide access to disufide bond mimetics, the makeup |
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Source: Australian National University, Centre for Antimatter-Matter Studies |
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Collection: Physics |
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| 46 | Supporting Information Immobilization of the Influenza A M2 Transmembrane Peptide in Virus- | ||
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Summary: 1 Supporting Information Immobilization of the Influenza A M2 Transmembrane Peptide in Virus... - Envelope Mimetic Lipid Membranes: A Solid-State NMR Investigation Wenbin Luo, Sarah D. Cady, and Mei Hong |
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Source: Hong, Mei - Department of Chemistry, Iowa State University |
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Collection: Chemistry |
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| 47 | Biomaterials 26 (2005) 46954706 Viscoelastic and mechanical behavior of recombinant | ||
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Summary: were liberated from the respective plasmids via restriction digestion with BspM I and SexA I... , respectively, of the diblock poly- mer P2 (Scheme 1). Restriction cleavage of each plasmid with SexA I and Xma... pP2 was propagated in E. coli strain SCS110 and cleaved with restriction endonuclease ... |
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Source: Srinivasarao, Mohan - School of Polymer, Textile and Fiber Engineering, Georgia Institute of Technology |
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Collection: Materials Science |
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| 48 | Determinants of Activity in the Erythropoietin Receptor Studied with | ||
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Summary: identified by Seubert et al. are shown in Figure 6.2B. 1.4 EPO mimetic peptides (EMPs) With regards to its... from reference [38](EPO) and from reference [18](EPO mimetic peptides). b) ED50 is the concentration... reference [38](EPO) and from reference [18](EPO mimetic ... |
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Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution, |
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Collection: Biology and Medicine ; Environmental Sciences and Ecology |
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| 49 | ADVANCEMENT IN PROTEIN INFERENCE FROM SHOTGUN PROTEOMICS USING PEPTIDE DETECTABILITY | ||
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Summary: . Nesvizhskii, A. I., Keller, A., Kolker, E. & Aebersold, R. (2003). A statistical model for identifying... proteins by tandem mass spectrometry. Anal Chem 75, 4646-4658. . 7. Nesvizhskii, A. I. & Aebersold, R... ADVANCEMENT IN PROTEIN INFERENCE FROM SHOTGUN PROTEOMICS USING ... |
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Source: Radivojac, Predrag - School of Informatics, Indiana University |
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Collection: Computer Technologies and Information Sciences |
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| 50 | BioMed Central Page 1 of 10 | ||
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Summary: - yunwlam@cityu.edu.hk; Angus I Lamond - a.i.lamond@lifesci.dundee.ac.uk * Corresponding author Abstract... provide sufficient interaction specificity which may allow the development of drugs or peptide mimetics... referred to as the RVXF/W motif. Results: We demonstrate that a peptide based on the RVXF/W ... |
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Source: Trinkle-Mulcahy, Laura - Department of Cellular and Molecular Medicine, University of Ottawa |
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Collection: Biology and Medicine |
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| 51 | PRINCIPLES OF MIMETIC DISCRETIZATIONS OF DIFFERENTIAL OPERATORS | ||
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Summary: . The isomorphism J : Ck Ck is given by Ja = i a, i k i k . (3.6) We identify i k with its dual so that i k, j k... = (Wi 12)T and a1 b2 = m3 i=1 (aT Wi 12b)i 3 and b2 a1 = m3 i=1 (bT (Wi 12)T a)i 3 . (5.2) Matrix... of the left hand side in (4.23) is a D a = a D a, m3 i=1 i 3 = m3 i=1 aT Wi 12( D a) ... |
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Source: Bochev, Pavel - Applied Mathematics and Scientific Computing Department, Sandia National Laboratories |
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Collection: Mathematics |
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| 52 | Molecules 2011, 16, 1426-1451; doi:10.3390/molecules16021426 ISSN 1420-3049 | ||
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Summary: .mdpi.com/journal/molecules Review Material Binding Peptides for Nanotechnology Urartu Ozgur Safak Seker 1,2, * and Hilmi Volkan... peptides and their utilization in nanotechnology, which has brought new challenges and opportunities... and peptides. This combinatorial approach has also been adapted over the past decade to select ... |
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Source: Gürel, Levent - Department of Electrical and Electronics Engineering, Bilkent University |
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Collection: Engineering |
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| 53 | Polar residues in transmembrane helices can decrease electrophoretic mobility in polyacrylamide gels without causing helix dimerization | ||
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Summary: and assembly of membrane proteins using peptides and SDS-PAGE experiments as a membrane mimetic system... and rapidly on the oligomeric state of a peptide in a "membrane mimetic" environment, SDS-PAGE is still often... interactions between peptides in SDS solution. Here we offer a ... |
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Source: Wimley, William C. - Department of Biochemistry, Tulane University |
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Collection: Biology and Medicine |
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| 54 | PRINCIPLES OF MIMETIC DISCRETIZATIONS OF DIFFERENTIAL OPERATORS PAVEL B. BOCHEV1 AND JAMES M. HYMAN2 | ||
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Summary: . The isomorphism J : Ck Ck is given by Ja = i a, i k i k .(3.6) We identify i k with its dual so that i k, j k... = (Wi 12)T and a1 b2 = m3 i=1 (aT Wi 12b)i 3 and b2 a1 = m3 i=1 (bT (Wi 12)T a)i 3 .(5.2) Matrix... of the left hand side in (4.23) is a D a = a D a, m3 i=1 i 3 = m3 i=1 aT Wi 12( D a) ... |
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Source: Hyman, James "Mac" - Theoretical Division, Los Alamos National Laboratory |
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Collection: Mathematics |
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| 55 | Expanding the polypeptide backbone: hydrogen-bonded conformations in hybrid | ||
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Summary: . An extraordinary wealth of conformational information is now available on peptides and proteins, which are formed... of peptides constructed from higher homologues (u) of a-amino acids. This review examines the nature... of intramolecularly hydrogen-bonded conformations of hybrid peptides formed by amino acid residues, with a ... |
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Source: Balaram , P. - Molecular Biophysics Unit, Indian Institute of Science, Bangalore |
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Collection: Biology and Medicine |
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| 56 | The International Journal of Biochemistry & Cell Biology 39 (2007) 23142323 Peptides derived from type I thrombospondin repeat-containing | ||
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Summary: novel peptides with anti-angiogenic activity, and designing mimetic peptides with tailored properties... can help us design novel synthetic peptides or peptide mimetics derived from these thrombospondin... ., Schneider, A. J., Davidson, D. J., Majest, S. M., et al. ... |
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Source: Popel, Aleksander S. - Department of Biomedical Engineering, Johns Hopkins University |
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Collection: Engineering ; Biology and Medicine |
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| 57 | Empirical Evaluation of a Dynamic Experiment Design Method for Prediction of MHC Class I-Binding Peptides1 | ||
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Summary: -Binding Peptides1 Keiko Udaka,2 * Hiroshi Mamitsuka,3 Yukinobu Nakaseko,* and Naoki Abe The ability to predict MHC... -binding peptides remains limited despite ever expanding demands for specific immunotherapy against cancers... sequence patterns have been hampered by the insufficiency of the number/quality of the peptide binding ... |
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Source: Rosset, Saharon - IBM T.J. Watson Research Center |
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Collection: Mathematics |
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| 58 | Research Article A Bayesian Approach to Protein Inference Problem | ||
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Summary: graph (Fig. 1a), i.e., a bipartite graph in which two disjoint sets of vertices represent the proteins... of images. IEEE Trans. Pattern Analysis Mach. Intell. 6, 721741. Keller, A., Nesvizhskii, A.I., Kolker, E... 309. Nesvizhskii, A.I. 2007. Protein identification by tandem mass spectrometry and ... |
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Source: Radivojac, Predrag - School of Informatics, Indiana University |
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Collection: Computer Technologies and Information Sciences |
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| 59 | Crystal Structures of a High-affinity Macrocyclic Peptide Mimetic in Complex with the Grb2 SH2 Domain | ||
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Summary: Crystal Structures of a High-affinity Macrocyclic Peptide Mimetic in Complex with the Grb2 SH2... -phosphorus- containing macrocyclic peptide mimetic that exhibits significant anti- proliferative effects against erbB-2... to the protein. Here, we describe the structural basis for the binding of a macrocyclic ... |
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|
Source: Waugh, David S.- Macromolecular Crystallography Laboratory, National Cancer Institute; Wlodawer, Alexander - Macromolecular Crystallography Laboratory, National Cancer Institute |
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Collection: Biology and Medicine ; Chemistry |
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| 60 | Phage Display Technologies Nicole Stricker, Johns Hopkins University, Baltimore, Maryland, USA | ||
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Summary: virus (phage) as a vehicle to express diverse protein or peptide sequences as part of the phage coat... viral infection, the expressed peptides are displayed on the surface of the viral particle. Depending... on the DNA fragments cloned, phage display allows for expression of either short peptides or large proteins |
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Source: Li, Min - Department of Neuroscience, Johns Hopkins University |
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Collection: Biology and Medicine |
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| 61 | Membrane-Bound Dimer Structure of a -Hairpin Antimicrobial Peptide from Rotational-Echo Double-Resonance Solid-State NMR | ||
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Summary: curves for out-of-register NCCN hydrogen-bonding motifs. (a) (i, j - 2) parallel packing. (b) (i, j + 4... Membrane-Bound Dimer Structure of a -Hairpin Antimicrobial Peptide from Rotational-Echo Double... Vised Manuscript ReceiVed May 12, 2006 ABSTRACT: The intermolecular packing of a -hairpin antimicrobial ... |
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Source: Hong, Mei - Department of Chemistry, Iowa State University |
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Collection: Chemistry |
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| 62 | Development of Novel Small-Size Peptides as Putative Therapeutic Drugs | ||
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Summary: an adequate chemical modification. Since the number of peptides and peptide mimet- ics to choose from... #12;Development of Novel Small-Size Peptides as Putative Therapeutic Drugs m. f. Masman 2010 #12... groningen Development of novel small-size peptides as putative therapeutic drugs ... |
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|
Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution, |
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Collection: Biology and Medicine ; Environmental Sciences and Ecology |
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| 63 | Chemical shift assignment and structural plasticity of a HIV fusion peptide derivative in dodecylphosphocholine micelles | ||
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Summary: - sphocholine (DPC) micelles. The micelles serve as a membrane mimetic with which membrane-associated peptides... , The helixhingehelix structural motif in human apolipoprotein A-I determined by NMR spectroscopy... Chemical shift assignment and structural plasticity of a HIV fusion peptide derivative |
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Source: Weliky, David - Department of Chemistry, Michigan State University |
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Collection: Chemistry |
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| 64 | The Application of Molecular Dynamics Simulation Techniques and Free Energy | ||
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Summary: mimetic peptide 1 13 2.1 Introduction . . . . . . . . . . . . . . . . . . . . . . . . 15 2.2 Methods... mimetic peptide 1 . . 21 2.3.2 Dimerization of the EPO mimetic peptide 1 . . 22 2.3.3 Conformational space... -dependant kinase CKS cyclin-dependant kinase subunit ... |
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|
Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution, |
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Collection: Biology and Medicine ; Environmental Sciences and Ecology |
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| 65 | Structural and functional analyses of minimal phosphopeptides targeting the polo-box domain | ||
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Summary: by phosphothreonine mimetic peptides was sufficient to induce mitotic arrest and apoptotic cell death. The mode... ). To examine the effect of the Pmab-containing mimetic peptide in vivo, and to overcome poor membrane... -Pmab peptide, another type of 2-amino-4,4-difluoro-3-methyl- ... |
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|
Source: Wlodawer, Alexander - Macromolecular Crystallography Laboratory, National Cancer Institute |
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Collection: Chemistry ; Biology and Medicine |
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| 66 | ISSN 1744-683X 1744-683X(2010)6:20;1-Q | ||
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Summary: | Pages 49515226 PAPER E. Kokkoli et al. Fibronectin-mimetic peptide- amphiphile nanofiber gels support... : a mechanically robust tissue engineering scaffold Tissue Engineering #12;Fibronectin-mimetic peptide... -amphiphile nanofibers as a potential scaffold for tissue engineering. A ... |
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|
Source: Kokkoli, Efie - Department of Chemical Engineering and Materials Science, University of Minnesota |
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Collection: Materials Science |
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| 67 | J. Phys. II Yance 5 (1995) 1427-1431 OCTOBER 1995, PAGE 1427 Classification | ||
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Summary: 2 + d2)x(BK~/8a)~/~I(ro/I) with I(z) = z[kei(z)ker'(z)-ker(z)kei'(z)]. The constants of integration... Peptides Huey W. Huang Physics Department, Rice University, Houston, Texas 77251-1892, U-S-A- (Received15... peptides exhibit an insertion transition when they interact with lipid bilayers. At low concentrations |
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Source: Ecole Polytechnique, Centre de mathématiques |
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Collection: Mathematics |
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| 68 | A Hydrogen Bond Surrogate Approach for Stabilization of Short Peptide Sequences in r- | ||
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Summary: efforts include -peptide helices, terphenyl helix mimetics, miniproteins, peptoid helices, and side... .; Hamilton, A. D. Synthetic non-peptide mimetics of alpha- helices. Chem. Soc. Rev. 2007, 36, 326334. 10... Garner, J.; Harding, M. M. Design and synthesis of R-helical peptides and ... |
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Source: Lawson, Catherine L. - Department of Chemistry and Chemical Biology, Rutgers University |
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Collection: Biology and Medicine ; Chemistry |
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| 69 | Design of a Novel Fibronectin-Mimetic Peptide-Amphiphile for Functionalized Biomaterials | ||
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Summary: Design of a Novel Fibronectin-Mimetic Peptide-Amphiphile for Functionalized Biomaterials Anastasia... fibronectin- mimetic peptides to target the integrin. However, to date, the therapeutic use of these peptides... performed on different days). NoVel ... |
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Source: Kokkoli, Efie - Department of Chemical Engineering and Materials Science, University of Minnesota |
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Collection: Materials Science |
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| 70 | The Importance of Peptide Detectability for Protein Identification, Quantification, and Experiment Design in MS/MS Proteomics | ||
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Summary: The Importance of Peptide Detectability for Protein Identification, Quantification, and Experiment... States Received June 5, 2010 Peptide detectability is defined as the probability that a peptide... and label-free quantification. Previously, predictors for peptide detectability trained on standard |
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Source: Radivojac, Predrag - School of Informatics, Indiana University |
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Collection: Computer Technologies and Information Sciences |
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| 71 | Identification and Rational Redesign of Peptide Ligands to CRIP1, A Novel Biomarker for Cancers | ||
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Summary: ) Small peptides as potent mimetics of the protein hormone erythropoietin. Science 273: 458464. 13. Desai... Identification and Rational Redesign of Peptide Ligands to CRIP1, A Novel Biomarker for Cancers... . With peptide structure information and the NMR structure of CRIP1, the higher-affinity A1 ... |
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Source: Dokholyan, Nikolay V. - Department of Biochemistry and Biophysics, University of North Carolina at Chapel Hill |
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Collection: Physics ; Biology and Medicine |
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| 72 | Peptoids that mimic the structure, function, and mechanism of helical antimicrobial peptides | ||
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Summary: .T.D., A.I., and D.G. analyzed data; and N.P.C., J.A.P., A.M.C., M.T.D., and A.E.B. wrote the paper... Peptoids that mimic the structure, function, and mechanism of helical antimicrobial peptides... August 31, 2007) Antimicrobial peptides (AMPs) and their mimics are emerging as promising antibiotic |
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|
Source: Barron, Annelise E. - Department of Bioengineering, Stanford University |
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Collection: Materials Science ; Biotechnology |
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| 73 | Isolation of peptides of the brevinin-1 family with potent | ||
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Summary: Rana boylii 210 J. Peptide Res. 62, 2003 / 207213 #12;membrane-mimetic environment (26). As shown... Isolation of peptides of the brevinin-1 family with potent candidacidal activity from the skin... types of antifungal agents. Six peptides with antimicrobial activity were isolated from norepinephrine |
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Source: Davidson, Carlos - Environmental Studies Program, San Francisco State University |
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Collection: Environmental Sciences and Ecology |
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| 74 | PAPER www.rsc.org/obc | Organic & Biomolecular Chemistry Structural studies of model peptides containing b-, c-and d-amino acids | ||
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Summary: PAPER www.rsc.org/obc | Organic & Biomolecular Chemistry Structural studies of model peptides... structures of five model peptides Piv-Pro-Gly-NHMe (1), Piv-Pro-bGly-NHMe (2), Piv-Pro-bGly-OMe (3), Piv... of the structures of peptides 1 and 2 illustrates the dramatic consequences upon backbone homologation in short |
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Source: Balaram , P. - Molecular Biophysics Unit, Indian Institute of Science, Bangalore |
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Collection: Biology and Medicine |
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| 75 | Mechanism of Penetration of Antp(43-58) into Membrane Bilayers Wenyi Zhang and Steven O. Smith* | ||
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Summary: : Antp(43-58) is one of many peptides with basic and aromatic residues capable of crossing cell membranes... efficiently in a receptor-independent manner. The basic-aromatic motif is responsible for peptide binding... . We use high-resolution 1H solution NMR methods to establish the location of the Antp(43-58) peptide |
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Source: Smith, Steven O.- Department of Biochemistry and Cell Biology, SUNY at Stony Brook |
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Collection: Biology and Medicine |
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| 76 | Receptor Interacting Protein Kinase-3 Determines Cellular Necrotic Response | ||
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Summary: .1016/j.cell.2009.05.021 SUMMARY Smac mimetics induce apoptosis synergistically with TNF-a by triggering... ., 2004). Our study revealed that the Smac mimetic together with TNF-a, promote the formation of a caspase... ., 2008). During these studies, we noticed that the Smac mimetic-induced cell death in human colon cancer |
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Source: National Institute of Biological Sciences, Beijing |
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Collection: Biology and Medicine |
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| 77 | Multiple Role of Di-tripeptide Transport Protein DtpT in Proteolytic System of Lactococcus lactis | ||
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Summary: , is reported to be an inhibitor of the peptide transporter PepT1; some peptides or peptide mimetics... number of oligopeptides ranging from 4 to 30 amino acid residues. Part of the released peptides are taken... up by the cells via the oligopeptide transport system, and these ... |
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|
Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution, |
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Collection: Biology and Medicine ; Environmental Sciences and Ecology |
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| 78 | Conformational properties of hybrid peptides containing | ||
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Summary: Conformational properties of hybrid peptides containing a- and x-amino acids* R.S. Roy P. Balaram... : 91 80 23600683/91 80 23600535 E-mail: pb@mbu.iisc.ernet.in Key words: ax sequences; b-peptides; c-peptides... ; hybrid peptides; peptide conformations Abstract: This review briefly surveys ... |
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Source: Balaram , P. - Molecular Biophysics Unit, Indian Institute of Science, Bangalore |
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Collection: Biology and Medicine |
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| 79 | Combinatorial Libraries of Synthetic Peptides as a Model for Shotgun Proteomics | ||
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Summary: A, respectively. NTMILEICTR from complement com- ponent C3 and ATEHLSTLSEK from apolipoprotein A-I... Combinatorial Libraries of Synthetic Peptides as a Model for Shotgun Proteomics Brian C. Bohrer... the analytical complexity of biological proteolytic digests has been developed. Combinatorial peptide libraries |
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Source: Radivojac, Predrag - School of Informatics, Indiana University |
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Collection: Computer Technologies and Information Sciences |
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| 80 | Leading Edge Cell 131, November 16, 2007 2007 Elsevier Inc. 655 | ||
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Summary: -molecule mimetics interact with the BIR domain of IAPs. Because XIAP is a bona de caspase inhibitor, it was presumed... that Smac mimetics primarily target XIAP thus allowing activation of caspase-9, result- ing... , to participate in TNF-induced NF-B activation (Rothe et al., 1995). The goal has been to use Smac mimetics |
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Source: Wu, Hao - Department of Biochemistry, Cornell University |
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Collection: Biology and Medicine |
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| 81 | Published: December 22, 2010 r 2010 American Chemical Society 790 dx.doi.org/10.1021/ac102272r |Anal. Chem. 2011, 83, 790796 | ||
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Summary: ), 113122. (9) Searle, B. C.; Turner, M.; Nesvizhskii, A. I. J. Proteome Res. 2008, 7 (1), 245253. (10... .; Biemann, K Anal. Chem. 1971, 43 (6), 681691. (18) Ausloos, P.; Clifton, C. L.; Lias, S. G.; Mikaya, A. I... . M. Proteins 2010, 78 (2), 365380. (45) Keller, A.; Nesvizhskii, ... |
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Source: Radivojac, Predrag - School of Informatics, Indiana University |
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Collection: Computer Technologies and Information Sciences |
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| 82 | Structure and mechanism of b-hairpin antimicrobial peptides in lipid bilayers from solid-state NMR spectroscopy | ||
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Summary: of this representative b-hairpin antimicrobial peptide. We found that PG-1 structure is membrane dependent: in bacteria-mimetic... Structure and mechanism of b-hairpin antimicrobial peptides in lipid bilayers from solid-state NMR... , and dynamics of the arginine-rich b-hairpin antimicrobial peptide PG-1 as ... |
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Source: Hong, Mei - Department of Chemistry, Iowa State University |
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Collection: Chemistry |
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| 83 | Host-defense peptides isolated from the skin secretions of the Northern red-legged frog Rana aurora aurora | ||
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Summary: Host-defense peptides isolated from the skin secretions of the Northern red-legged frog Rana aurora... , Novo Nordisk A/S, 2880 Bagsvaerd, Denmark e European Institute for Peptide Research (IFRMP 23... ; accepted 4 May 2004 Available online 15 June 2004 Abstract Antimicrobial peptides in the skin secretions |
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Source: Davidson, Carlos - Environmental Studies Program, San Francisco State University |
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Collection: Environmental Sciences and Ecology |
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| 84 | Amino Acid Residues in the IIb Subunit That Are Critical for Ligand Binding to Integrin IIb 3 Are Clustered in the | ||
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Summary: -Ligand Interactions44278 #12;K164A, R165A, Y166A, V200A, I203A, F204A, Y207A, S222A, D224A, S226A, F231A... binding to these mAbs (e.g. D74A, L84A, F87A, W110A, H112A, W113A, R147A, I203A, and Y207A) (Table III... and ligand-mimetic antibodies (e.g. LJ- CP3), suggesting that these ... |
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Source: Springer, Timothy A. - Immune Disease Institute & Department of Pathology, Harvard University |
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Collection: Biology and Medicine |
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| 85 | Real-Time Surface Plasmon Resonance Imaging Measurements for the Multiplexed Determination | ||
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Summary: .; Hallberg, A.; Samuelsson, B.; Danielson, U. H. J. Med. Chem. 2002, 45, 5430-5439. (9) Archakov, A. I... of Protein Adsorption/Desorption Kinetics and Surface Enzymatic Reactions on Peptide Microarrays Greta J... of five different peptides: N terminal and C terminal im- mobilized wild-type S ... |
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Source: Corn, Robert M.- Department of Chemistry, University of California, Irvine |
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Collection: Chemistry |
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| 86 | Submitted to the Annals of Applied Statistics A NESTED MIXTURE MODEL FOR PROTEIN | ||
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Summary: samples. In a typical experiment, proteins in a sample are first broken into their constituent peptides... . The resulting mixture of peptides is then subjected to mass spectrometry, which generates thousands of spectra... , each characteristic of its generat- ing peptide. Here we consider the problem of inferring, from |
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Source: Das, Soma - Department of Human Genetics, University of Chicago |
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Collection: Biology and Medicine |
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| 87 | Membrane Thickening by the Antimicrobial Peptide PGLa Georg Pabst,* Stephan L. Grage,y | ||
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Summary: . Liposome-based biomem- brane mimetic systems: implications for lipid-peptide interactions. In Advances... -substitution analog with membrane-mimetic systems. In Peptides: The Wave of the Future. R. A. Houghten and M. Lebl... -ray diffraction studies of the specificity of the interaction of antimicrobial ... |
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Source: Watts, Anthony - Biomembrane Structure Unit, Department of Biochemistry, University of Oxford |
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Collection: Biology and Medicine |
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| 88 | Two Apolipoprotein E Mimetic Peptides, ApoE(130-149) and ApoE(141-155)2 Bind to LRP1 | ||
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Summary: Two Apolipoprotein E Mimetic Peptides, ApoE(130-149) and ApoE(141-155)2 , Bind to LRP1 Johnny E... for the two different apoE mimetic peptides (Table 2). The binding affinity (KD) was approximately 150 n... , S. V., and Laskowitz, D. T. (2001) Apolipoprotein E and Mimetic ... |
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Source: Komives, Elizabeth A. - Department of Chemistry and Biochemistry, University of California at San Diego |
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Collection: Biology and Medicine |
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| 89 | High-Throughput Method for Ranking the Affinity of Peptide Ligands Selected from Phage Display Libraries | ||
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Summary: , W. J. (1996) Small peptides as potent mimetics of the protein hormone erythropoietin. Science 273... ARTICLES High-Throughput Method for Ranking the Affinity of Peptide Ligands Selected from Phage... July 23, 2007; Revised Manuscript Received February 18, 2008 The use of phage display peptide libraries |
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Source: Hammock, Bruce D. - Department of Entomology, University of California, Davis |
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Collection: Biotechnology |
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| 90 | J.S. Murray S.D.S. Jois | ||
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Summary: recognize the A11-mer peptide, that has a truncated N-terminus (thus starts with A, Fig. 3A). I-As -derived... peptide on two class II major histocompatibility complex (MHC II) molecules predicts polarized T... -cell receptor (TCR) contact positions. J. Peptide Res., 2002, 59, 115±122. ... |
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Source: Schountz, Tony - Department of Biological Sciences, University of Northern Colorado |
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Collection: Environmental Sciences and Ecology ; Biology and Medicine |
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| 91 | Bundles Consisting of Extended Transmembrane Segments of Vpu from HIV-1: Computer Simulations and Conductance Measurements | ||
|
Summary: the bundle with its N-terminal end during a 1 ns simulation (Figure 2A, I, left segment in the bundle... .4)° [corresponding ) (-52.0 ( 12.2)°] and causes the strong bend (see Figure 2A, I). The and values for the EYR... of the peptide, the cytoplasmic and transmembrane (TM) domains, ... |
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|
Source: Fischer, Wolfgang - Institute of Biophotonics, School of Biomedical Science and Engineering, National Yang-Ming University; Watts, Anthony - Biomembrane Structure Unit, Department of Biochemistry, University of Oxford |
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Collection: Biology and Medicine |
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| 92 | Structure and dynamics of cationic membrane peptides and proteins: Insights | ||
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Summary: REVIEW Structure and dynamics of cationic membrane peptides and proteins: Insights from solid... February 2011 proteinscience.org Abstract: Many membrane peptides and protein domains contain functionally... the membrane-bound topology of these peptides. A versatile array of solid-state NMR experiments now readily |
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|
Source: Hong, Mei - Department of Chemistry, Iowa State University |
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Collection: Chemistry |
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| 93 | Mass Spectrometric Protein Identification Using the Global Proteome Machine | ||
|
Summary: data in a relational database, Proteomics, 2, 3647. 22. A. Keller, A.I. Nesvizhskii, E. Kolker, and R... sequence collection searching with masses of peptides or their fragments, spectral library searching... spectra that correspond to peptides and their fragments. It is important to find all the relevant peaks |
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|
Source: Chait, Brian T. - Laboratory of Mass Spectrometry and Gaseous Ion Chemistry, Rockefeller University |
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Collection: Biology and Medicine |
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| 94 | The ascaphins: a family of antimicrobial peptides from the skin secretions of the most primitive extant frog, Ascaphus truei | ||
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Summary: The ascaphins: a family of antimicrobial peptides from the skin secretions of the most primitive... and is regarded as the sister taxon to the clade of all other living frogs. Eight structurally related peptides... families of antimicrobial peptides from frog skin but display limited sequence identity with the cationic |
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|
Source: Davidson, Carlos - Environmental Studies Program, San Francisco State University |
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Collection: Environmental Sciences and Ecology |
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| 95 | Molecules 2011, 16, 3499-3518; doi:10.3390/molecules16053499 ISSN 1420-3049 | ||
|
Summary: .mdpi.com/journal/molecules Review Phage Display of Combinatorial Peptide Libraries: Application to Antiviral Research Guillaume... . In this context, antiviral peptides constitute a promising area for disease prevention and treatment... . The identification and development of these inhibitory peptides require the high-throughput ... |
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|
Source: Ecole Polytechnique, Centre de mathématiques |
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Collection: Mathematics |
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| 96 | Effects of arginine density on the membrane-bound structure of a cationic antimicrobial peptide from solid-state NMR | ||
|
Summary: Effects of arginine density on the membrane-bound structure of a cationic antimicrobial peptide... November 2008 Keywords: Antimicrobial peptide Depth of insertion Oligomeric structure Arginine Solid... structure of a cationic -hairpin antimicrobial peptide in which the number of Arg residues has been halved |
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|
Source: Hong, Mei - Department of Chemistry, Iowa State University |
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Collection: Chemistry |
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| 97 | Phage display screening against a set of targets to establish peptide-based sugar mimetics and molecular docking to predict binding site | ||
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Summary: Phage display screening against a set of targets to establish peptide-based sugar mimetics... . Docking studies were conducted to establish whether the mimetic peptides bind to the lectin Con... the question as to whether some of these peptides are indeed true sugar ... |
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Source: Orner, Brendan Patrick - Division of Chemistry and Biological Chemistry, Nanyang Technological University |
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Collection: Biology and Medicine ; Chemistry |
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| 98 | Available online at www.sciencedirect.com De novo designed synthetic mimics of antimicrobial peptides | ||
|
Summary: and products [53,54]. Design of arylamide and heteroarylamide antimicrobial peptide mimetics The goal of our... peptides Richard W Scott1 , William F DeGrado2 and Gregory N Tew3 Antimicrobial peptides are small cationic... to accomplish this goal with peptide-based structures. Although ... |
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Source: Tew, Gregory N. - Department of Polymer Science and Engineering, University of Massachusetts at Amherst |
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Collection: Materials Science ; Chemistry |
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| 99 | Peptide 15-mers of defined sequence that substitute for random amino acid copolymers in amelioration | ||
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Summary: of the copolymers might be enhanced by the peptide mimetics. In this paper we report generation of three peptide... Peptide 15-mers of defined sequence that substitute for random amino acid copolymers... with MBP 8599 for binding. Moreover, two high-affinity synthetic peptide 15-mers ... |
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Source: Strominger, Jack L. - Department of Molecular and Cellular Biology, Harvard University |
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Collection: Biology and Medicine |
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| 100 | A Bayesian Approach to Protein Inference Problem in Shotgun Proteomics | ||
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Summary: - uration graph (Fig. 1(a)), i.e. a bipartite graph in which two disjoint sets of vertices represent... algorithms identify proteins?. Nat. Biotechnol. 25(7), 755757 (2007) 6. Nesvizhskii, A.I.: Protein... 1467 (2004) 10. Nesvizhskii, A.I., Aebersold, R.: Interpretation of shotgun proteomic data: the ... |
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Source: Radivojac, Predrag - School of Informatics, Indiana University |
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Collection: Computer Technologies and Information Sciences |
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