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Sample search results for: a-binding protein affects

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1 MOLECULAR AND CELLULAR BIOLOGY, Aug. 1986, p. 2932-2943 0270-7306/86/082932-12$02.00/0
 

Summary:  poly(A)-binding activity. Therefore, XYPA72.1 encodes the 72K poly(A)-binding protein... RNA translated in vitro produced the 72K poly(A)-binding protein, and mRNA blot analysis detected a single 2... .1-kilobase mRNA. DNA blot analysis suggested a single gene for the ...

  

Source: Dreyfuss, Gideon - Department of Biochemistry and Biophysics, University of Pennsylvania

 

Collection: Biology and Medicine

 
2 Proc. Natl. Acad. Sci. USA Vol. 95, pp. 85268531, July 1998
 

Summary:  transposon contain 9 and 15 TnpA binding sites, respectively, the initial binding of the protein to DNA does... , intermolecular DNA­protein complexes form with DNA fragments containing three or more TnpA binding sites... fragment containing a tail-to-tail dimeric ...

  

Source: Schläppi, Michael - Biological Sciences Department,, Marquette University

 

Collection: Biology and Medicine

 
3 Biochemical Basis of the Constitutive Coprotease Activity of RecA P67W Protein Julie K. Mirshad. and Stephen C. Kowalczykowski*,|
 

Summary:  fluorescence of etheno M13 DNA upon RecA binding (20). In a buffer consisting of 25 mM Tris-HCl (pH 7.5), 0.1 m... Protein Can Catalyze DNA Strand Exchange. The order of RecA protein and SSB protein addition affects DNA... Biochemical Basis of the Constitutive ...

  

Source: Kowalczykowski, Stephen C. - Section of Microbiology, University of California, Davis

 

Collection: Biology and Medicine

 
4 Vol. 11, No. 7MOLECULAR AND CELLULAR BIOLOGY, JUlY 1991, p. 3419-3424 0270-7306/91/073419-06$02.00/0
 

Summary:  The poly(A)-binding protein (PABP) is the major mRNA-binding protein in eukaryotes, and it is essential... ). The predominant protein of this complex is the poly(A)-binding protein (PABP), and it is associated preferentially... and to characterize and localize the ...

  

Source: Dreyfuss, Gideon - Department of Biochemistry and Biophysics, University of Pennsylvania

 

Collection: Biology and Medicine

 
5 RecA Protein Piero R Bianco,University of California, Davis, California, USA
 

Summary:  . In exponentially growing E. coli, these proteins are expressed at a low, basal level (due to LexA binding... the second site) dsDNA binding excludes LexA or Umu (D')2C binding LexA binding prevents dsDNA or Umu (D')2C... binding Umu (D')2C binding excludes dsDNS or ...

  

Source: Kowalczykowski, Stephen C. - Section of Microbiology, University of California, Davis

 

Collection: Biology and Medicine

 
6 MOLECULAR AND CELLULAR BIOLOGY, May 1988, p. 2237-2241 Vol. 8, No. 5 0270-7306/88/052237-05$02.00/0
 

Summary:  (U)-binding proteins and compare their specificity to that of the previously described cytoplasmic poly(A)-binding... on poly(U) cellulose. This technique has also been extensively used to isolate poly(A)-binding proteins... was confirmed by immunoblotting with the specific anti-C protein ...

  

Source: Dreyfuss, Gideon - Department of Biochemistry and Biophysics, University of Pennsylvania

 

Collection: Biology and Medicine

 
7 The C Terminus of the Escherichia coli RecA Protein Modulates the DNA Binding Competition with Single-stranded DNA-binding
 

Summary:  that are at the heart of recombination pro- cesses in all cells. Strand exchange is initiated when RecA binds to single... , this technique has been used extensively to measure RecA binding to DNA (3, 5, 53, 56). Importantly, this assay... of ATP hydrolysis indicate a high level of RecA ...

  

Source: Cox, Michael M. - Department of Biochemistry, University of Wisconsin at Madison

 

Collection: Biology and Medicine

 
8 Interaction of Escherichia coli RecA Protein with LexA Repressor II. INHIBITION OF DNA STRAND EXCHANGE BY THE UNCLEAVABLE LexA S119A REPRESSOR ARGUES
 

Summary:  -stranded DNA binding (SSB) protein, arguing that LexA repressor affects the competition between RecA protein... LexA S119A repressor affected the activities of RecA protein in a manner similar to that observed... DNA either by affecting the induction of RecA ...

  

Source: Kowalczykowski, Stephen C. - Section of Microbiology, University of California, Davis

 

Collection: Biology and Medicine

 
9 Primer Review for Biology of the Cell Tethering of proteins to RNAs by bacteriophage proteins.
 

Summary:  ). In contrast, the polyA binding protein will bind to any polyadenylated RNA, that is, virtually all cellular m... ) and (Graveley and Maniatis 1998). Coller et al. (1998) fused the poly(A) binding protein 1 to MS2 coat protein... and showed that, ...

  

Source: Ecole Polytechnique, Centre de mathématiques

 

Collection: Mathematics

 
10 Single-Stranded DNA Binding Proteins
 

Summary:  to nucleic acid lattices. (a) Binding in the oligonucleotide binding mode; note the presence of the block... Single-Stranded DNA Binding Proteins STEPHEN C. KOWALCZYKOWSKI DAVID G. BEAR PETER H. VON HIPPEL I... . Protein Isolation and Purification: Procedures and Strategies . . . . A. Production of Cellular ...

  

Source: Kowalczykowski, Stephen C. - Section of Microbiology, University of California, Davis

 

Collection: Biology and Medicine

 
11 MOLECULAR AND CELLULAR BIOLOGY, Aug. 2011, p. 31133125 Vol. 31, No. 15 0270-7306/11/$12.00 doi:10.1128/MCB.05402-11
 

Summary:  -Mediated Nuclear Import of Cytoplasmic Poly(A) Binding Protein Occurs as a Direct Consequence... ). Cytoplasmic poly(A) binding protein (PABPC) has recently been shown to exert differential effects on gene... . 1998. The human poly(A)- ...

  

Source: Bedwell, David M. - Department of Microbiology, University of Alabama at Birmingham

 

Collection: Biology and Medicine

 
12 Chemistry & Biology, Vol. 11, 865874, June, 2004, 2004 Elsevier Ltd. All rights reserved. DOI 10.1016/j.chembiol.2004.04.006 Evolutionary Optimization of a Nonbiological
 

Summary:  protein fold (Lo Surdo, P., Walsh, M.A.,binds ATP. Nature 364, 550­553. and Sollazzo, M. (2004). A novel... .1016/j.chembiol.2004.04.006 Evolutionary Optimization of a Nonbiological ATP Binding Protein for Improved... Folding Stability has itself evolved independently several times [6]. If con- temporary ...

  

Source: Szostak, Jack W. - Department of Genetics, Harvard University

 

Collection: Environmental Sciences and Ecology ; Biology and Medicine

 
13 Protein Footprinting in a Complex Milieu: Identifying the Interaction Surfaces of the Chemotaxis Adaptor
 

Summary:  enrichment of the ICAT label would allow us to distinguish the CheW residues affected by CheA binding despite... residue at the CheW­ CheA binding interface. As a prelude to conducting ICAT footprinting on a complex... variants in a single reaction, thereby streamlining data collection. ...

  

Source: Kiessling, Laura - Departments of Chemistry & Biochemistry, University of Wisconsin at Madison

 

Collection: Chemistry ; Biology and Medicine

 
14 C H A P T E R F O U R T E E N Tethered Function Assays: An
 

Summary:  experience, tethering the MS2 coat protein to the N-terminus of the poly(A)-binding protein (PAB) resulted... ). mRNA stabilization by poly(A) binding protein is independent of poly(A) and requires translation... portions of poly(A)-binding ...

  

Source: Baker, Kristian E. - Center for RNA Molecular Biology, Case Western Reserve University; Wickens, Marv - Department of Biochemistry, University of Wisconsin at Madison

 

Collection: Biology and Medicine

 
15 The Rockefeller University Press, 0021-9525/98/07/435/8 $2.00 The Journal of Cell Biology, Volume 142, Number 2, July 27, 1998 435442
 

Summary:  RNA Requires the Nuclear-encoded Poly(A)-binding Protein, RB47 Christopher B. Yohn,* Amybeth Cohen, Cristen... of the poly(A)-binding protein family, and binds with high af- finity and specificity to the 5 untranslated... , oxygen evolution complex; PABP, poly(A)-binding ...

  

Source: Lehigh University, Department of Biological Sciences; Mullen, Sean P. - Department of Biological Sciences, Lehigh University

 

Collection: Biology and Medicine ; Environmental Sciences and Ecology

 
16 Proc. Natl. Acad. Sci. USA Vol. 95, pp. 1229512299, October 1998
 

Summary:  length) showed RecA binding kinetics (followed by measuring DNA extension) to be affected strongly... Proc. Natl. Acad. Sci. USA Vol. 95, pp. 12295­12299, October 1998 Biophysics RecA binding... . To address this general question, we have studied a model system, namely, ...

  

Source: Croquette, Vincent - Laboratoire de Physique Statistique, Département de Physique, École Normale Supérieure

 

Collection: Physics

 
17 CLASS 3.7: 04/05/07 RNA SPLICING AND PROCESSING
 

Summary:  . Proteins iii. Splicing factors needed for: - proteins - proteins - proteins 4. Stages of splicing a... 1 CLASS 3.7: 04/05/07 RNA SPLICING AND PROCESSING A. Splicing Nuclear Protein-Coding Pre... - snurp named for ii. common structural core of 8 ...

  

Source: Andres, Andrew - School of Life Sciences, University of Nevada at Las Vegas

 

Collection: Biology and Medicine

 
18 High-throughput two-hybrid analysis The promise and the peril
 

Summary:  is a conse- quence of the protein network topology, with random loss of proteins mostly affecting the many... -Ub PLV PLV N-Ub gene Y C-Ub LexA- VP16 gene X N-Ub LexA binding site HIS3 reporter gene ubiquitin... . The major prototype Keywords computational methods; Plasmodium falciparum; ...

  

Source: Fields, Stan - Department of Genome Sciences, University of Washington at Seattle

 

Collection: Biology and Medicine

 
19 Functional proteomics Maria Monti, Stefania Orru`, Daniela Pagnozzi, Piero Pucci*
 

Summary:  introduced new debated questions. The presence of the tag can affect protein conformation, thus alter- ing... natural level. ProtA binds tightly to an IgG matrix, providing the first affinity purification step... projects, there is a concomitant exponential growth in the number of ...

  

Source: Noriega, Fernando Gabriel - Department of Biological Sciences, Florida International University

 

Collection: Biology and Medicine

 
20 Encyclopaedia of Life Science--Editor Stylesheet Copyright Macmillan Reference Ltd 20 November 1998 Page 1
 

Summary:  . In exponentially growing E. coli, these proteins are expressed at a low, basal level (due to LexA binding... 1998 Page 1 ENCYCLOPEDIA OF LIFE SCIENCES 1998 Macmillan Reference Ltd RecA protein Piero R. Bianco... A protein of Escherichia coli is a multifunctional ...

  

Source: Kowalczykowski, Stephen C. - Section of Microbiology, University of California, Davis

 

Collection: Biology and Medicine


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21 Ann.Rev.Cell Biol. 1986.2: 45~98 Copyright1986by AnnualReviewsInc. All rights reserved
 

Summary:  identified a 50-55 kDapoly(A) binding protein in nuclei of yeast. The physiological role of the hnRNApoly(A... affected the hnRNPspresent via the effects of proteolysis, RNAases,centrifugal drag force, or protein... ) binding ...

  

Source: Dreyfuss, Gideon - Department of Biochemistry and Biophysics, University of Pennsylvania

 

Collection: Biology and Medicine

 
22 2004 EUROPEAN MOLECULAR BIOLOGY ORGANIZATION EMBO reports VOL 5 | NO 11 | 2004 On the mechanism of protein palmitoylation
 

Summary:  in the cytoplasm; the conserved acyl-CoA binding protein (ACBP) binds free Pal-CoA and maintains the intracellular... by the acyl-CoA binding protein (ACBP). (3) Pal transfer protein (PAT)-mediated protein palmitoylation... ...

  

Source: Dietrich, Lars - Department of Biological Sciences, Columbia University

 

Collection: Biology and Medicine

 
23 TPR proteins: the versatile helix Luca D. D'Andrea1
 

Summary:  ) binds to Hsp70, whereas the middle three-TPR domain (TPR2A) binds to Hsp90. Binding studies showed... TPR proteins: the versatile helix Luca D. D'Andrea1 and Lynne Regan2 1 Institute of Biostructure... Tetratrico peptide repeat (TPR) proteins have several interesting properties, including their folding

  

Source: Mochrie, Simon - Department of Applied Physics, Yale University; Regan, Lynne - Department of Molecular Biophysics and Biochemistry, Yale University

 

Collection: Biology and Medicine ; Biotechnology ; Materials Science ; Physics

 
24 MICROBIOLOGICAL REVIEWS, Mar. 1995, p. 94123 Vol. 59, No. 1 0146-0749/95/$04.00 0
 

Summary:  , American Society for Microbiology Protein-Protein Interactions: Methods for Detection and Analysis ERIC M... .........................................................................................................................................................95 PHYSICAL METHODS TO SELECT AND DETECT PROTEINS THAT BIND ANOTHER ...

  

Source: Economou, Tassos - Institute of Molecular Biology and Biotechnology, Foundation of Research and Technology, Hellas

 

Collection: Biology and Medicine

 
25 Biochemical Characterization of a Mutant RecA Protein Altered in DNA-Binding Julie K. Mirshad, and Stephen C. Kowalczykowski*,|
 

Summary:  protein with poly(rU) (data not shown). Since L1 was proposed to be both the LexA binding site... to this site affects ATPase activity. This result indicates that this RecA N99 protein preparation either... of secondary structure by SSB protein (38, 47, 48). However, ...

  

Source: Kowalczykowski, Stephen C. - Section of Microbiology, University of California, Davis

 

Collection: Biology and Medicine

 
26 Structure, function and evolution of multidomain proteins Christine Vogel
 

Summary:  ]): for the a chain, the WHD is orange and the oligomerisation/CoA-binding domain (fatty acid responsive transcription... Structure, function and evolution of multidomain proteins Christine Vogelà , Matthew Bashton... , Nicola D Kerrison, Cyrus Chothia and Sarah A Teichmann Proteins are composed of evolutionary units called

  

Source: Teichmann, Sarah - Laboratory of Molecular Biology, MRC; Vogel, Christine - Institute for Cellular and Molecular Biology, University of Texas at Austin

 

Collection: Biology and Medicine ; Biotechnology

 
27 TRENDS in Genetics Vol.18 No.3 March 2002 http://tig.trends.com 0168-9525/02/$ see front matter 2002 Elsevier Science Ltd. All rights reserved. PII: S0168-9525(01)02616-6
 

Summary:  , or be linked through intermediates. Removal of poly(A) effectively removes poly(A)-binding protein (PAB... ) The poly(A)-binding protein and an mRNA stability protein jointly regulate an endoribonuclease activity... of this model is that PUF proteins inhibit the ...

  

Source: Kimble, Judith - Department of Biochemistry, University of Wisconsin at Madison

 

Collection: Biology and Medicine

 
28 RecA Protein Piero R Bianco, University of California, Davis, California, USA
 

Summary:  binding prevents dsDNA or Umu(D')2C binding Umu(D')2C binding excludes dsDNA or LexA binding Figure 1... RecA Protein Piero R Bianco, University of California, Davis, California, USA Stephen C... Kowalczykowski, University of California, Davis, California, USA The RecA protein of ...

  

Source: Kowalczykowski, Stephen C. - Section of Microbiology, University of California, Davis

 

Collection: Biology and Medicine

 
29 RNA-binding proteins, which are involved in the synthesis, processing, transport, translation, and degradation of RNA,
 

Summary:  signal osk oskar PABP poly(A)-binding protein PP2C protein phosphatase 2C RB RNA-binding RBD RNA... to associate with the mRNA­protein complex [42­44]. RB47 is a member of the eukaryotic poly(A)- binding protein... ...

  

Source: Fedoroff, Nina V.- Huck Institutes of the Life Sciences & Department of Biology, Pennsylvania State University

 

Collection: Biology and Medicine

 
30 MOLECULAR AND CELLULAR BIOLOGY, May 1987, p. 1731-1739 Vol. 7, No. 5 0270-7306/87/051731-09$02.00/0
 

Summary:  found in the yeast poly(A)-binding protein (PABP), the heterogeneous nuclear RNA-binding proteins Al... 2, and C23 and rich in proline in the poly(A)-binding protein. These findings suggest that the amino... consensus sequence which we have recently described in the yeast mRNA ...

  

Source: Dreyfuss, Gideon - Department of Biochemistry and Biophysics, University of Pennsylvania

 

Collection: Biology and Medicine

 
31 HUMAN MUTATION 17:263270 (2001) 2001 WILEY-LISS, INC.
 

Summary:  with an effect on one or more roles of the residue concerned. Roles that may be affected are: protein stability... a compensating mechanism in other cell types. d: Hindrance of ligand binding. Retinol (vitamin A) binds... stability. Protein stability is affected by ...

  

Source: Pilpel, Yitzhak - Department of Molecular Genetics, Weizmann Institute of Science

 

Collection: Biology and Medicine

 
32 PLEASE SCROLL DOWN FOR ARTICLE This article was downloaded by: [Shaw, Peter J.]
 

Summary:  tags (two Protein-A-binding domains, six His and nine Myc epitope repeats) and a 3C HRV protease site... By:[Shaw,PeterJ.]At:15:5511October2010 #12;Mass spectrometry in plant proteomic analysis 711 could affect the protein... of protein mixtures and software that is capable of searching vast numbers of mass ...

  

Source: Shaw, Peter - Cell and Developmental Biology Department, John Innes Centre

 

Collection: Biology and Medicine

 
33 Flower-preferential poly(A) binding (PAB) protein gene from rice Jong-Jin Han, Gynheung An *
 

Summary:  Flower-preferential poly(A) binding (PAB) protein gene from rice Jong-Jin Han, Gynheung... March 2003; accepted 21 March 2003 Abstract The Poly(A) binding (PAB) protein functions... Science Ireland Ltd. All rights reserved. Keywords: Flower; GUS; ...

  

Source: An, Gynheung - Department of Life Science, Pohang University of Science and Technology

 

Collection: Biotechnology ; Biology and Medicine

 
34 Introduction Parts of this chapter were published in
 

Summary:  ). First, SecA binds to the SecYEG translocase in the cytoplasmic membrane. Next, pre-proteins... G. Remarkably, the biogenesis of a variety of integral membrane proteins in B. subtilis is only mildly affected... postulated for SpoIIIJ and YqjG, as depletion of both of these ...

  

Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution,

 

Collection: Biology and Medicine ; Environmental Sciences and Ecology

 
35 GENOMICS OF HEARTWOOD FORMATION Forest Products Biotechnology, Department of Forestry
 

Summary:  Diphosphate Kinase GTP-binding Nuclear Protein Acyl-CoA-binding Protein Aminoacylase Citrate synthase UDP... and produce a woody body. This TREE- SPECIFIC GROWTH is affected by the secondary vascular system... ways. It also adversely affects forest management decisions by making it ...

  

Source: Han, Kyung-Hwan - Deparment of Forestry, Michigan State University

 

Collection: Biotechnology

 
36 An Interaction between the Escherichia coli RecF and RecR Proteins Dependent on ATP and Double-stranded DNA*
 

Summary:  .wisc.edu/. Conditions for RecA Binding to dsDNA--RecA (2 M) was incubated with X174 RF II DNA (6 M) and 3 mM ATP in 25 m... An Interaction between the Escherichia coli RecF and RecR Proteins Dependent on ATP and Double... R protein. Stoichiometric amounts of RecF protein bind to ...

  

Source: Cox, Michael M. - Department of Biochemistry, University of Wisconsin at Madison

 

Collection: Biology and Medicine

 
37 THE JOURNALOF BIOLOGICALCHEMISTRY 0 1991by The American Society for Biochemistry and MolecularBiology, Inc.
 

Summary:  filament. 0000 n=3.5 I -3: -3 -3: Therefore, the apparent K, willbe affected by the affinity ofrecA protein... that thepolynucleotides to which recA binds more weakly (i.e. poly(dA) and ssM13 DNA)give inhibition curves that do... Biology, Inc. Asymmetry in the recA Protein-DNA Filament* ...

  

Source: Kowalczykowski, Stephen C. - Section of Microbiology, University of California, Davis

 

Collection: Biology and Medicine

 
38 doi:10.1101/gad.1355605 2005 19: 2619-2630Genes & Dev.
 

Summary:  for nucleo- somes in comparison to protein-coding regions (Ng et al. Figure 6. LexA binding in vitro... that LexA binding to these unconventional sites can affect transcription of ad- jacent genes, but only... analysis of LexA ...

  

Source: Church, George M. - Wyss Institute for Biologically Inspired Engineering & Department of Genetics, Harvard University

 

Collection: Biotechnology

 
39 Binding of small molecules to cavity forming mutants of a de novo designed
 

Summary:  . The resulting spectra show ligands that bind to the protein. As summarized in Table I, F64A binds several... ) of compounds interacting with proteins S-824 and F64A. In this group of organic compounds, F64A binds benzene... determined by PFGSE-NMR showed that ...

  

Source: Hecht, Michael H. - Departments of Chemistry & Molecular Biology, Princeton University

 

Collection: Chemistry ; Biotechnology

 
40 Introduction All organisms consist of one or more
 

Summary:  for the biogenesis of some mitochondrial inner membrane proteins [32-34]. Depletion of YidC affects both Sec... backgrounds, deletion of SecG confers a cold-sensitive phenotype [67,68] while affecting protein export [6... , SecA binds with low affinity to negatively ...

  

Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution,

 

Collection: Biology and Medicine ; Environmental Sciences and Ecology


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41 Riboproteomics of the Hepatitis C Virus Internal Ribosomal Entry Henry Lu, Weiqun Li, William Stafford Noble, Donald Payan, and D. C. Anderson*,
 

Summary:  to the reversed sequence. Eighteen additional RNA binding proteins bound both sequences, including 4 polyA binding... binding protein II human 3 5 0.050 L23a 2 5 0.088 poly-A binding protein cyto 4 inducible 3 7 0.049 L26 1... ...

  

Source: Noble, William Stafford - Department of Genome Sciences, University of Washington at Seattle

 

Collection: Biology and Medicine ; Biotechnology

 
42 STEM CELLS AND DEVELOPMENT 17:119131 (2008) Mary Ann Liebert, Inc.
 

Summary:  31786 Acyl-CoA-binding Unique protein (ACBP) (Diazepam binding inhibitor) (DBI) (Endozepine) Q9D051... processing complex 4. Transport Acyl-CoA-binding protein 1. Transport 1. Acyl-CoA binding 1. Mitochondrion... -dimensional gel electrophoresis ...

  

Source: Honavar, Vasant - Department of Computer Science, Iowa State University

 

Collection: Biology and Medicine ; Computer Technologies and Information Sciences

 
43 Rmt1 catalyzes zinc-finger independent arginine methylation of ribosomal protein Rps2 in Saccharomyces cerevisiae
 

Summary:  . Wahle, Unusual sites of arginine methylation in poly(A)-binding protein II and in vitro methylation... methylation of Rps2 affects the protein­protein interactions that facilitate import and/or export of this RNA... .A. Silver, PRMT3 is a ribosomal protein methyltransferase that ...

  

Source: Clarke, Steven - Department of Chemistry and Biochemistry, University of California at Los Angeles

 

Collection: Biology and Medicine

 
44 760 Biochemistry 1985, 24, 760-767 Light Scattering Studies of the recA Protein of Escherichia coli: Relationship
 

Summary:  A protein, free ssDNA (concentration in recA binding equivalents), and the recAassDNA complex... inaccessible to recA binding in the absence of the nucleotides ATP or ATPyS (McEntee et al., 1981a). Therefore... A filament for- mation. This suggests that recA ...

  

Source: Cox, Michael M. - Department of Biochemistry, University of Wisconsin at Madison

 

Collection: Biology and Medicine

 
45 Tethered function assays using 30 untranslated regions
 

Summary:  in Fig. 2. In these experiments, tethered poly(A)-binding protein (Pab1p) was shown to stabilize... , in Saccharomyces cerevisiae, poly(A)- binding protein (Pab1p) is an essential gene involved in many different... of MS2/Pab1p fusions in yeast, the chimeric protein ...

  

Source: Baker, Kristian E. - Center for RNA Molecular Biology, Case Western Reserve University; Wickens, Marv - Department of Biochemistry, University of Wisconsin at Madison

 

Collection: Biology and Medicine

 
46 Cell. Vol. 49, 296-297. May 8. 1967, Copyright 0 1987 by Cell Press Promoters, Activator Proteins,
 

Summary:  . Similarly, LexA- GCN4, a hybrid protein in which the LexA binding domain is fused near the N-terminus of GCN... recognized either by the GCN4 or LexA bind- ing domains (Hope and Struhl, 1986, op cit.). This last result... - mentally regulated cofactors that affect ...

  

Source: 

 

Collection: Biology and Medicine

 
47 Small ribonucleoproteins Sandra L. Wolin and Peter Walter
 

Summary:  -binding proteins such as the poly- A-binding protein. This domain is also present in cer rain heterogeneous nuclear... be deleted without affecting the apparent binding specificity of the truncated protein for 7St RNA [38... between various components of small ribonucleo- ...

  

Source: Walter, Peter - Department of Biochemistry and Biophysics, University of California at San Francisco

 

Collection: Biology and Medicine

 
48 Introduction -On the mechanisms of bacterial membrane protein biogenesis
 

Summary:  ). The cytoplasmic domains 5 and 6 of SecY have been implicated in SecA binding to the translocase (175). Recent data... Chapter 1 11 Introduction - On the mechanisms of bacterial membrane protein biogenesis Martin van... of successful reports on 3D crystallization of - helical membrane proteins has increased ...

  

Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution,

 

Collection: Biology and Medicine ; Environmental Sciences and Ecology

 
49 ften in genetics research, explo-ration of an exceedingly rare con-
 

Summary:  , the brain le- sions associated with Parkinson's disease. Ozelius and colleagues found torsinA bind- ing... , a disorder caused by an abnor- mal protein that, when functional, may control how other proteins fold -- par... team from the University of Alabama in Tuscaloosa have discov- ered the role of an ...

  

Source: Caldwell, Guy - Department of Biological Sciences, University of Alabama in Tuscaloosa

 

Collection: Biology and Medicine

 
50 Sainfoin tannins and their impact on protein degradation during silage and
 

Summary:  in the a) Binding of tannins to a protein to form a soluble complex. c) Further aggregation. Complex... Sainfoin tannins and their impact on protein degradation during silage and rumen fermentation... and bumble bee (Photo: Martin M. Lorenz) #12;Sainfoin tannins and their impact on ...

  

Source: Sveriges Lantbruksuniversitet (Swedish University of Agricultural Sciences)

 

Collection: Multidisciplinary Databases and Resources

 
51 Roles of the two ClpC ATP binding sites in the regulation of competence and the stress response
 

Summary:  decreased ATPase activity in vitro, but did not interfere with MecA binding. In vivo, this mutation had... K. MecA binds to ComK and inhibits its DNA-binding activity (Kong and Dubnau, 1994), and ClpC enhances... this activity of MecA (Turgay et al., 1997). The N-terminal domain (NTD) of ...

  

Source: Kramer, Fred - Public Health Research Center, International Center for Public Health, University of Medicine and Dentistry of New Jersey

 

Collection: Biology and Medicine

 
52 Cell, Vol. 57, 1045-1052, June 16, 1989, Copyright 0 1989 by Cell Press Gene Activation and DNA Binding
 

Summary:  activation to Ubx target activation by the two proteins was the same suggests that LexA- abdA* binds normally... A operators. The fusion pro- teins activated gene expression from targets that contain a LexA binding site 128... A206 were pSH15-21 (which contains a Bicoid site), JK101 (which ...

  

Source: Brent, Roger - Fred Hutchinson Cancer Research Center

 

Collection: Biology and Medicine

 
53 Experimental detection of knotted conformations in denatured proteins
 

Summary:  of a native-like secondary struc- ture (Fig. 2B). YibK and YbeA bind the MTase cofactor S-adenosylmethio- nine... Experimental detection of knotted conformations in denatured proteins Anna L. Mallam1 , Joseph M... by the path of the polypep- tide backbone represent some of the most complex topologies observed in ...

  

Source: Jackson, Sophie - Department of Chemistry, University of Cambridge

 

Collection: Chemistry ; Biology and Medicine

 
54 The DinI and RecX Proteins Are Competing Modulators of RecA Function*
 

Summary:  protein (Fig. 3B). This limited enhance- ment of RecA binding by DinI generally accounts for the slow... - lation. Both proteins appear to affect primarily the assembly and disassembly of RecA filaments... combined with the RecFOR proteins, there are now modulators ...

  

Source: Cox, Michael M. - Department of Biochemistry, University of Wisconsin at Madison

 

Collection: Biology and Medicine

 
55 The DinI and RecX Proteins Are Competing Modulators of RecA Function*
 

Summary:  with nucleation of RecA onto ssDNA pre-bound with SSB protein (Fig. 3B). This limited enhance- ment of RecA... complementary or synergistic roles in RecA regu- lation. Both proteins appear to affect primarily the assembly... with the RecFOR proteins, there are now modulators that ...

  

Source: Cox, Michael M. - Department of Biochemistry, University of Wisconsin at Madison; Seifert, Hank - Department of Microbiology-Immunology, Northwestern University

 

Collection: Biology and Medicine

 
56 INTRODUCTION Parts of this chapter were published in
 

Summary:  in the parental 168 Figure 1. Schematic representation of processes that affect the yield of heterologous proteins... the cytoplasmic face (N-terminal domain) of RseA binds to E and inhibits E -directed transcription in the absence... ). Proteomics of protein secretion by Bacillus ...

  

Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution,

 

Collection: Biology and Medicine ; Environmental Sciences and Ecology

 
57 Summary and General Discussion Summary and General Discussion
 

Summary:  A lacking it is not able to lyse the cell. AcmA binds specifically to its substrate, peptidoglycan, via... , possibly lipoteichoic acids (LTA), are present at the sites where AcmA does not bind. AcmA binds... with trichloroacetic acid. The cell wall carbohydrates, apparently, hinder AcmA ...

  

Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution,

 

Collection: Biology and Medicine ; Environmental Sciences and Ecology

 
58 The EMBO Journal Vol.18 No.2 pp.289296, 1999 EMBO WORKSHOP REPORT
 

Summary:  of these is located within the gag gene and binds to a poly(A)- binding protein (PAB-1) in a cell-specific manner. He... ,E., Stauber,R. and Pavlakis,G.N. (1998) The human poly(A)- binding protein 1 shuttles between the nucleus... in nuclear import and export. ...

  

Source: Panté, Nelly - Department of Zoology, University of British Columbia

 

Collection: Biology and Medicine

 
59 Vol. 59, No. 6INFECTION AND IMMUNITY, June 1991, p. 2023-2028 0019-9567/91/062023-06$02.00/0
 

Summary:  A (36). There are many hypotheses regarding the role of bacterial IgA-binding proteins in pathogenesis... apparatus (27). IgA binding studies. Human myeloma IgA was kindly provided by Andrew Plaut and Joanne... -9567/91/062023-06$02.00/0 Copyright C 1991, American Society for Microbiology Cloned Alpha and Beta ...

  

Source: Ausubel, Frederick M. - Department of Genetics, Harvard University

 

Collection: Biology and Medicine

 
60 The first structure of a major histo-compatibility complex (MHC) class
 

Summary:  for crystallization, suggesting that carbo- hydrate may contribute significantly to Ly49A binding - even though Ly49A... , stimulates, rather than inhibits, cytolysis. MIC-A binds neither peptides, peptide surrogates (such as lipids... of the Ly49A binding sites, so ...

  

Source: Strong, Roland K. - Basic Sciences Division, Fred Hutchinson Cancer Research Center

 

Collection: Biology and Medicine


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61 The DNA Binding Domain of the Gene 2.5 Single-stranded DNA-binding Protein of Bacteriophage T7*
 

Summary:  .5 binding curve is presented in Fig. 3A. Binding curves consistent with that of the native protein were... homodimers in solution, strongly suggesting that the overall structure of these proteins is not affected... The DNA Binding Domain of the Gene 2.5 Single-stranded DNA-binding ...

  

Source: Richardson, Charles C. - Department of Biological Chemistry and Molecular Pharmacology, Harvard University

 

Collection: Biology and Medicine

 
62 assays: protein Telephone: 800.874.3723 or 815.968.0747 Fax: 800.842.5007 or 815.968.7316
 

Summary:  assays: protein Telephone: 800.874.3723 or 815.968.0747 Fax: 800.842.5007 or 815.968.7316 Internet... Substance...a Protein Assay Fact of Life Ideally, an assay should be compatible with all substances commonly... present in protein samples. Each protein assay method, however, exhibits its own particular ...

  

Source: Lebendiker, Mario - Wolfson Centre for Applied Structural Biology, Hebrew University of Jerusalem

 

Collection: Biotechnology ; Biology and Medicine

 
63 MOLECULAR AND CELLULAR BIOLOGY, 0270-7306/97/$04.00 0
 

Summary:  to most RNases (55). Similarly, the 3 poly(A) tract along with the poly(A)-binding protein is thought... ), and such a modification could affect their RNA-binding and/or protein- protein interaction capacity and result... -specific accumulation of -globin mRNA. One of the ...

  

Source: Kiledjian, Mike - Department of Cell Biology and Neuroscience, Rutgers University

 

Collection: Biology and Medicine

 
64 Membrane Charge and Curvature Determine Interaction with Acyl-CoA Binding Protein (ACBP) and Fatty Acyl-CoA Targeting
 

Summary:  Membrane Charge and Curvature Determine Interaction with Acyl-CoA Binding Protein (ACBP) and Fatty... Vised Manuscript ReceiVed June 17, 2002 ABSTRACT: Although acyl-CoA binding protein (ACBP) stimulates utilization... LCFA-CoAs (1), only acyl-CoA ...

  

Source: Meagher, Mary - Department of Psychology, Texas A&M University

 

Collection: Biology and Medicine

 
65 Current Biology 16, 21502155, November 7, 2006 2006 Elsevier Ltd All rights reserved DOI 10.1016/j.cub.2006.09.013 An Entropic Mechanism to Generate
 

Summary:  phosphorylation locally orders the protein. Such local order affects protein conformational en- tropy nonlinearly... about A's binding site for B; the binding site could always be available or could be induced... from Protein Phosphorylations Peter Lenz1 and Peter S. ...

  

Source: Swain, Peter - Centre for Systems Biology at Edinburgh, University of Edinburgh

 

Collection: Physics ; Biology and Medicine

 
66 Proteinprotein docking: is the glass half-full or half-empty?
 

Summary:  the liberal threshold of 10 A° binding- site RMSD to define hits. The goal of the rigid-body search... Protein­protein docking: is the glass half-full or half-empty? Sandor Vajda and Carlos J. Camacho... capable of building com- plexes from putative component protein structures? Results of recent

  

Source: Vajda, Sandor - Department of Biomedical Engineering, Boston University

 

Collection: Biotechnology ; Biology and Medicine

 
67 The Overlap of Small Molecule and Protein Binding Sites within Families of Protein Structures
 

Summary:  , and protein-ligand complexes. Other aspects of bias can not be corrected and therefore affect our observations... ) that is homologous to the 14-3-3-f (orange, 1A38:A) binding site for phosphopeptides (purple, 1A38:P). (C) Bepridil... The Overlap of Small Molecule and Protein Binding ...

  

Source: Eddy, Sean - Janelia Farm Research Campus, Howard Hughes Medical Institute; Sali, Andrej - Department of Biochemistry and Biophysics, University of California at San Francisco

 

Collection: Biology and Medicine ; Biotechnology

 
68 MOLECULAR AND CELLULAR BIOLOGY, 0270-7306/99/$04.00 0
 

Summary:  Functions with Poly(A)-Binding Protein To Stabilize mRNA In Vitro ZUOREN WANG, NANCY DAY, PANAYIOTA... of poly(A)-binding protein (PABP) monomers. Disruption of the -complex by sequestration of CP1 and CP2... - oribonucleases (40, 57), while the poly(A) tract and the poly(A)-binding ...

  

Source: Kiledjian, Mike - Department of Cell Biology and Neuroscience, Rutgers University

 

Collection: Biology and Medicine

 
69 COMMUNICATION First Principles Prediction of Protein Folding Rates
 

Summary:  . (1995). Folding of a 4-helix bundle - studies of acyl-coenzyme-A binding-pro- tein. Biochemistry, 34... COMMUNICATION First Principles Prediction of Protein Folding Rates Derek A. Debe and William A... studies have demonstrated that many small, single-domain proteins fold via simple two-state kinetics. We

  

Source: Goddard III, William A. - Materials and Process Simulation Center & Department of Chemistry, California Institute of Technology

 

Collection: Materials Science

 
70 J. Mol. Biol. (1996) 257, 756774 RecA Protein Dynamics in the Interior of RecA
 

Summary:  RecA binding to dsDNA where a RecA mixture containing 4.8 mM labeled wtRecA and 1.2 mM unlabeled Rec... in the DNA to provide more contiguous RecA binding sites is not so prominent. The results with ATP were again... hydrolysis, a pre-formed and completely saturating filament of wtRecA ...

  

Source: Cox, Michael M. - Department of Biochemistry, University of Wisconsin at Madison

 

Collection: Biology and Medicine

 
71 RecA Protein Filaments: End-dependent Dissociation from ssDNA and Stabilization by RecO and RecR
 

Summary:  % of the 5 mM labeled RecA protein. The upper panel in Figure 3A shows RecA binding to linear ssDNA. In the 2... R proteins thereby stabilize RecA ®laments even at the 5H ends of ssDNA, a fact which should affect... with ®laments formed on circular ssDNA (Shan & Cox, 1996). A number ...

  

Source: Cox, Michael M. - Department of Biochemistry, University of Wisconsin at Madison

 

Collection: Biology and Medicine

 
72 This article appeared in a journal published by Elsevier. The attached copy is furnished to the author for internal non-commercial research
 

Summary:  beta-actin, ribosomal protein L12, and a Poly(a) binding protein. The applications of these HKGs... CCC AAT GA 191 bp Rev: TTT TGG ATG GTC AGT TGG AC Poly(a) binding protein (Pabp) 3 For: AAT GGC GTC... protein L12 and L10, a ...

  

Source: Weis, Virginia M. - Department of Zoology, Oregon State University

 

Collection: Biology and Medicine ; Environmental Sciences and Ecology

 
73 United States Patent 6,548,021 Church , et al. April 15, 2003
 

Summary:  -stranded DNA protein arrays Abstract The invention provides a synthetic array of surface-bound, bimolecular... for a protein, wherein a recognition site within a nucleic acid sequence for a protein of a first member... is different from a recognition site within a nucleic acid sequence for a protein of a ...

  

Source: Bulyk, Martha L. - Division of Genetics, Brigham and Women's Hospital, Harvard University

 

Collection: Biology and Medicine

 
74 [Frontiers in Bioscience 3, d570-603, June 17, 1998] DNA STRAND EXCHANGE PROTEINS: A BIOCHEMICAL AND PHYSICAL COMPARISON
 

Summary:  RecG DNA helicase, branch migration of Holliday junctions RuvA Binds to Holliday-, cruciform... [Frontiers in Bioscience 3, d570-603, June 17, 1998] 570 DNA STRAND EXCHANGE PROTEINS... ;DNA strand exchange proteins 571 Table 1A. Proteins Involved in Genetic Recombination ORGANISM General

  

Source: Kowalczykowski, Stephen C. - Section of Microbiology, University of California, Davis

 

Collection: Biology and Medicine

 
75 Molecular Cell, Vol. 17, 773782, March 18, 2005, Copyright 2005 by Elsevier Inc. DOI 10.1016/j.molcel.2005.02.023 Defining a Centromere-like Element in Bacillus
 

Summary:  chromosomes are remodeled into a single elon-we mapped RacA binding sites by performing chro- gated... suggest that RacA binds origin-proximal portion of the chromosome, within the portion that is trapped... , we show that RacA binding sites spread out over, and ...

  

Source: Liu, Xiaole Shirley - Dana-Farber Cancer Institute & Department of Biostatistics, Harvard University; Losick, Richard M. - Department of Molecular and Cellular Biology, Harvard University; Rudner, David - Department of Microbiology and Molecular Genetics, Harvard University

 

Collection: Biology and Medicine ; Biotechnology ; Computer Technologies and Information Sciences

 
76 The DinI Protein Stabilizes RecA Protein Filaments* Received for publication, March 19, 2004, and in revised form, May 10, 2004
 

Summary:  it in several ways. Whenever the indirect ATPase assay is utilized to monitor RecA binding to DNA, it is always... the capacity of RecA to displace SSB. The inhibition of RecA binding by pre- bound SSB results in low rates... indicating that the intrinsic rate of ATP hydrolysis is not ...

  

Source: Cox, Michael M. - Department of Biochemistry, University of Wisconsin at Madison

 

Collection: Biology and Medicine

 
77 The DinI Protein Stabilizes RecA Protein Filaments* Received for publication, March 19, 2004, and in revised form, May 10, 2004
 

Summary:  it in several ways. Whenever the indirect ATPase assay is utilized to monitor RecA binding to DNA, it is always... . The inhibition of RecA binding by pre- bound SSB results in low rates of RecA-mediated ATP hydrol- ysis even... that the intrinsic rate of ATP hydrolysis is not affected by ...

  

Source: Cox, Michael M. - Department of Biochemistry, University of Wisconsin at Madison

 

Collection: Biology and Medicine

 
78 JOURNAL OF VIROLOGY, 0022-538X/01/$04.00 0 DOI: 10.1128/JVI.75.10.47214733.2001
 

Summary:  .e., it does not require the W121 site for stable binding to CyP A). Binding to CyP A protected Cys residue... Protein LARS DIETRICH, LORNA S. EHRLICH, TRACY J. LAGRASSA, DANA EBBETS-REED, AND CAROL CARTER* Department... 11794-5222 Received 27 July 2000/Accepted 18 February 2001 While several cellular ...

  

Source: Dietrich, Lars - Department of Biological Sciences, Columbia University

 

Collection: Biology and Medicine

 
79 Molecular Cell, Vol. 17, 110, March 18, 2005, Copyright 2005 by Elsevier Inc. DOI 10.1016/j.molcel.2005.02.023 Defining a Centromere-like Element in Bacillus
 

Summary:  , with the replication origin re- we mapped RacA binding sites by performing chro- gion of each chromosome anchored... suggest that RacA binds origin-proximal portion of the chromosome, within the portion that is trapped... , we show that RacA binding sites spread out ...

  

Source: Liu, Jun - Department of Statistics, Harvard University

 

Collection: Biotechnology ; Mathematics

 
80 Experimental and Computational Analyses of the Energetic Basis for Dual Recognition of Immunity
 

Summary:  exceptions are the accel- eration of the kon values for several mutants (N72A, N75A and F86A) binding Im2... Protein Specificity #12;Gkin obs fall into three categories: those that affect binding by (1) b1 kcal... the specific recognition of Im proteins. First, none of the 12 mutations ...

  

Source: Baker, David - Center for Nanotechnology and NanoTechnology & Department of Biochemistry, University of Washington at Seattle

 

Collection: Chemistry ; Biotechnology


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81 THEJOURNALOF BIOLOGICALCHEMISTRY 0 1994 by The American Society for Biochemistry and Molecular Biology, Inc.
 

Summary:  to determine if the RuvA and/or RuvB proteins affected the by- pass of DNA structural barriers during... reaction affected the results. When the RuvA and B proteins were added before or concurrently with Rec... BProteins Facilitate the Bypassof Heterologous DNA Insertions duringRecA ...

  

Source: Cox, Michael M. - Department of Biochemistry, University of Wisconsin at Madison

 

Collection: Biology and Medicine

 
82 RESEARCH Open Access Prevalence of SOS-mediated control of integron
 

Summary:  LexA proteins that are able to recognize the b/g- Proteobacteria. The LexA binding motif of the b... A proteins recognizes the b/g-Proteobacteria LexA binding motif [54], and for the Spirochetes... of a large fraction of integron integrases by binding to Escherichia ...

  

Source: Ecole Polytechnique, Centre de mathématiques

 

Collection: Mathematics

 
83 Molecular Cell A De Novo Protein Binding Pair
 

Summary:  code 1MJ0) paired with PH1109, a Pyrococcus horikoshii coenzyme A (CoA)-binding protein (PDB codes 2D59... (Lys135Glu)-CoA-Pdar to 2.3 A° and 2.0 A° , respectively (Table S3; Prb is based on a CoA-binding... Molecular Cell Article A De Novo Protein Binding Pair By Computational Design and Directed

  

Source: Baker, David - Center for Nanotechnology and NanoTechnology & Department of Biochemistry, University of Washington at Seattle

 

Collection: Chemistry ; Biotechnology

 
84 BIOLOGICAL FRAMEWORKS FOR ENGINEERS Session #16 [Integrating Cells into Tissues]
 

Summary:  affecting the concentrations of other proteins in that cell? Could the cell . . . alter the sequence... matrix, and protein synthesis. Central Framework: Cells join together physically, electrically... in class on protein synthesis. Session Outline: A. Tissues Defined B. Examples of tissues & their ...

  

Source: Sniadecki, Nathan J. - Department of Mechanical Engineering, University of Washington at Seattle

 

Collection: Biology and Medicine ; Engineering

 
85 REVIEW ARTICLE CURRENT SCIENCE, VOL. 99, NO. 4, 25 AUGUST 2010 457
 

Summary:  that a collapsed intermediate is formed early during the folding reaction of acyl-CoA binding protein173... of acyl- CoA binding protein could be described by a `two-state' mechanism16 . FRET measurements have been... , and that such modulations ...

  

Source: Bhalla, Upinder S. - National Centre for Biological Sciences, Tata Institute of Fundamental Research; Udgaonkar, Jayant B. - National Centre for Biological Sciences, Tata Institute of Fundamental Research

 

Collection: Biology and Medicine ; Computer Technologies and Information Sciences

 
86 Chemistry & Biology, Vol. 10, 12451253, December, 2003, 2003 Elsevier Science Ltd. All rights reserved. DOI 10.1016/j.chembiol.2003.11.007 Control of Gene Expression with Small
 

Summary:  here for affecting intracellular SA protein was also coexpressed in this system fused to the DNA... -anti-mouse-alkaline phosphate conjugate (Zymed Lab- taining the lacZ gene under the control of four dimeric LexA binding... -Mediated Acylation of Targeted Lysine Residues in Recombinant Yeast ...

  

Source: Peterson, Blake R. - Department of Medicinal Chemistry, University of Kansas

 

Collection: Chemistry

 
87 Dissecting the expression dynamics of RNA-binding proteins in posttranscriptional regulatory networks
 

Summary:  is another poly(A) binding protein (28) that binds to diverse sets of transcripts involved in ribosome... domain of yeast poly(A)-binding protein is necessary and sufficient for RNA binding and cell viability... Dissecting the expression dynamics of RNA-binding ...

  

Source: Babu, M. Madan - Laboratory of Molecular Biology, MRC

 

Collection: Biotechnology

 
88 Author's personal copy Synthesis and analysis of stabilizing ligands
 

Summary:  typically be fused to other proteins without affecting the stability of the resulting fusion pro- tein, so... 104 0.8 0.6 0.2 0.4 0 fractionboundtracer [FKBP ligand] (nM) A B Figure 2. (A) Binding analysis... --We recently identified mutants of the human FKBP12 protein that are unstable ...

  

Source: Wandless, Tom - Department of Molecular Pharmacology, Stanford University

 

Collection: Biology and Medicine

 
89 Indecisive M13 Procoat Protein Mutants Bind to SecA but Do Not Activate the Translocation ATPase*
 

Summary:  ). The energy-utilizing subunit SecA binds the precursor protein in the cytoplasm or at the membrane surface... the interaction of the mutant precursor proteins with SecA. Binding of Sec... -dependent pro98coat protein stimulated ...

  

Source: Economou, Tassos - Institute of Molecular Biology and Biotechnology, Foundation of Research and Technology, Hellas

 

Collection: Biology and Medicine

 
90 As easy as flipping a switch? Chapman M Wright, Richard A Heins and Marc Ostermeier
 

Summary:  in fluorescent biosensors for Zn2+ . Unexpectedly, the MBP Zn2+ sensor (MBP-A*) binds Zn2+ in the unintended open... As easy as flipping a switch? Chapman M Wright, Richard A Heins and Marc Ostermeier Proteins... . Aspiring to be nature's equal, researchers have successfully created protein switches of their ...

  

Source: Gray, Jeffrey J. - Department of Biomolecular and Chemical Engineering, Johns Hopkins University; Ostermeier, Marc - Department of Biomolecular and Chemical Engineering, Johns Hopkins University

 

Collection: Biology and Medicine ; Biotechnology ; Chemistry

 
91 Rapid Communication Proteomics of herpes simplex virus infected cell protein 27: association
 

Summary:  . Virol. 52, 108­118. Afonina, E., Stauber, R., Pavlakis, G.N., 1998. The human poly(A)-binding protein 1... to defects in translation of viral mRNAs, or in shutoff of host protein synthesis without affecting levels... Rapid Communication Proteomics of herpes simplex virus infected cell ...

  

Source: Knipe, David M. - Department of Microbiology and Molecular Genetics, Harvard University

 

Collection: Biology and Medicine

 
92 Characterization of binding sites of a new neurotensin receptor antagonist, [3
 

Summary:  of the 3 tritium atoms. Fig. 2. [3 H]SR 142948A binding as a function of increasing protein concentrations... M, respectively). The regional distribution of [3 H]SR 142948A binding in the rat brain closely matched... ]SR 142948A binding sites in ...

  

Source: Ecole Polytechnique, Centre de mathématiques

 

Collection: Mathematics

 
93 DNA is transcribed into RNA, and RNA is translated into protein. The RNA link in
 

Summary:  poly(A) tail2 (FIG. 1). Upon export to the cytoplasm, poly(A)-binding protein (PABP) binds to the tail... .Onceexportedtothecytoplasm,themRNApoly(A)tailenhancestranslationand stabilizes the mRNA. Poly(A)-bound poly(A)-binding protein (PABP) interacts with the 5-cap-bound translation... ...

  

Source: Wickens, Marv - Department of Biochemistry, University of Wisconsin at Madison

 

Collection: Biology and Medicine

 
94 Generation of Polyclonal Antiserum for the Detection of Methylarginine Proteins
 

Summary:  M, Herschman HR, Wahle E. Unusual sites of arginine methylation in Poly(A)-binding protein II... affects the protein methylation of specific proteins amongst many likely methylarginine proteins, anti... Generation of Polyclonal Antiserum for the Detection of ...

  

Source: Hing, Huey - Department of Biology, State University of New York at Brockport

 

Collection: Biology and Medicine

 
95 Enhanced monomermonomer interactions can suppress the recombination deciency of the
 

Summary:  Rev Biochem 61: 603±640. Zaitsev, E.N., and Kowalczykowski, S.C. (1998a) Binding of double... The RecA142 protein, in which valine is substituted for isoleucine-225, is defective for genetic recombina... exchange activity and the in vivo function of RecA142 protein, suggesting that recombination function ...

  

Source: Kowalczykowski, Stephen C. - Section of Microbiology, University of California, Davis

 

Collection: Biology and Medicine

 
96 Proc. Natl. Acad. Sci. USA Vol. 96, pp. 25962601, March 1999
 

Summary:  5a) (45). (c) An 80-residue fragment from acyl-CoA binding protein (1aca) (46). (d) An 80-residue... independent of protein length [such as topological com- plexity (21) and sequence mutation] drastically affect... funnel. Thus, mutations that affect the solvation ...

  

Source: Goddard III, William A. - Materials and Process Simulation Center & Department of Chemistry, California Institute of Technology

 

Collection: Materials Science

 
97 The International Journal of Biochemistry & Cell Biology 36 (2004) 21312136 Molecules in focus
 

Summary:  is composed of three subdomains with fold homology to ubiquitin, acyl-CoA-binding protein and the pleckstrin... Radixin: cytoskeletal adopter and signaling protein Klaus P. Hoeflicha,b, Mitsuhiko Ikuraa,b, a Division... regulation of radixin protein function occurs by association of the FERM and C-terminal ...

  

Source: Ikura, Mitsuhiko - Division of Molecular and Structural Biology, University of Toronto

 

Collection: Biotechnology ; Biology and Medicine

 
98 New insights into the formation of active nonsense-mediated decay complexes
 

Summary:  . The translation apparatus consists of the cap-binding complex (light green), the ribo- some (purple), poly(A)-binding... , an exon-junction protein complex (EJC) and hUpf proteins mediate rapid downregulation of aberrant m... . Ineukaryotes,anmRNAundergoesseveralprocessingsteps before it can be translated into the corresponding ...

  

Source: Lykke-Andersen, Jens - Department of Molecular, Cellular, and Developmental Biology, University of Colorado at Boulder

 

Collection: Biology and Medicine

 
99 Introduction Protein phosphorylation is a tightly regulated process that is
 

Summary:  al., 1998) and the motor protein dynein (Purohit et al., 1999; Fig. 2A). Binding to -tubulin... Introduction Protein phosphorylation is a tightly regulated process that is controlled... by the opposing actions of protein kinases and phosphatases. It is now accepted that targeting of these ...

  

Source: Scott, John D. - Department of Pharmacology, University of Washington at Seattle

 

Collection: Biology and Medicine

 
100 regulated U-rich RNA-binding protein involved in selective mRNA destabilization in trypanosomes. J. Biol. Chem. 276, 3480134809
 

Summary:  ­19520 12 Batista, J.A. et al. (1994) Characterization of a Trypanosoma cruzi poly(A)-binding protein... poly(A)-binding protein I cDNA cloning, expression, and binding to 50 -untranslated region sequence... elements. Mol. Biochem. Parasitol. 98, 117­129 14 Bates, E.J. et al. (2000) ...

  

Source: Read, Andrew - Center for Infectious Disease Dynamics & Department of Entomology, Pennsylvania State University; West, Stuart - School of Biological Sciences, University of Edinburgh

 

Collection: Biology and Medicine ; Environmental Sciences and Ecology


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