| Sample search results for: abc transproter gene |
| 1 | Proper Use of /locus_tag in Genome Submissions At the International Nucleotide Sequence Database Collaborators meeting, it was agreed | ||
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Summary: submission #12;ABC_0022 ABC_0022 ABC_4568 (new gene) ABC_0023 ABC_0023 OR Gaps in original locus... _tags Original Revised submission submission ABC_0020 ABC_0020 ABC_0021 (new gene) ... |
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Source: Lippincott-Schwartz, Jennifer - Cell Biology and Metabolism Branch, National Institute of Child Health and Human Development |
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Collection: Biology and Medicine |
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| 2 | A Basic Mathematical Model for Iron Uptake in Bacteria | ||
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Summary: dependent on intra cellular iron, G free -- an operon of genes encoding an ABCtransporter, ready... to be transcribed and translated, G inh -- an operon of genes encoding an ABCtransporter, blocked by an iron... the properties of hybrid systems, which are piecewise linear as far as ... |
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Source: Bielefeld, Universität - Fakultät für Mathematik, Arbeitsgemeinschaft Numerische Analysis Dynamischer Systeme |
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Collection: Mathematics |
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| 3 | A Basic Mathematical Model for Iron Uptake in Bacteria | ||
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Summary: encoding an ABC-transporter, ready to be transcribed and translated, Ginh an operon of genes encoding... the properties of hybrid systems, which are piecewise linear as far as gene expression is concerned and classical... system which in gram 2 #12;negative bacteria usually consists of receptors in the outer membrane and ... |
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Source: Bielefeld, Universität - Fakultät für Mathematik, Arbeitsgemeinschaft Numerische Analysis Dynamischer Systeme |
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Collection: Mathematics |
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| 4 | Introduction ABC-MCMC for Networks Simulations Data Analysis Discussion Reverse Engineering Gene Networks Using Approximate | ||
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Summary: Introduction ABC-MCMC for Networks Simulations Data Analysis Discussion Reverse Engineering Gene... ;Introduction ABC-MCMC for Networks Simulations Data Analysis Discussion Gene Expression · Genes: Functional... ;Introduction ABC-MCMC for Networks Simulations Data ... |
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Source: Debarre, Olivier - Institut de Recherche Mathématique Avancée, Université Louis Pasteur |
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Collection: Mathematics |
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| 5 | Expression Analysis of ABC Transporters Reveals Differential Functions of Tandemly Duplicated Genes in | ||
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Summary: Expression Analysis of ABC Transporters Reveals Differential Functions of Tandemly Duplicated Genes... , BC Canada V5Z 1L6 We have previously identified 60 predicted ABC transporter genes... these putative ABC genes work in worms, we generated promoterfluorescent ... |
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Source: Baillie, David - Department of Molecular Biology and Biochemistry, Simon Fraser University |
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Collection: Biology and Medicine |
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| 6 | ATP-binding cassette protein E is involved in gene transcription and translation in Caenorhabditis elegans | ||
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Summary: Received 5 August 2004 Available online 27 August 2004 Abstract ATP-binding cassette protein E (ABCE) gene... developmental stages. Three genes, rpl-4, nhr-91, and C07B5.3, were previously found to interact with ABCE. Our... elegans; Protein translation; Gene transcription ATP-binding ... |
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Source: Baillie, David - Department of Molecular Biology and Biochemistry, Simon Fraser University |
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Collection: Biology and Medicine |
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| 7 | Copyright 2007 by the Genetics Society of America DOI: 10.1534/genetics.106.066720 | ||
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Summary: Accepted for publication December 24, 2006 ABSTRACT ABC transporters constitute one of the largest gene... previously demonstrated that the Caenorhabditis elegans ABC family shows poor one-to-one gene orthology... of ABC genes in the three species were found in ... |
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Source: Baillie, David - Department of Molecular Biology and Biochemistry, Simon Fraser University |
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Collection: Biology and Medicine |
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| 8 | Gene 221 (1998) 117125 Isolation of an Arabidopsis thaliana cDNA by complementation of a yeast | ||
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Summary: Gene 221 (1998) 117125 Isolation of an Arabidopsis thaliana cDNA by complementation of a yeast abc... to a single copy gene and encodes a protein sharing 45% similarity with the yeast Abc1p protein. Cytochrome... (Bousquet et al., 1991). Inactivation of the ABC1 ... |
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Source: Hamel, Patrice - Department of Plant Cellular and Molecular Biology, Ohio State University; Meier, Iris - Department of Plant Cellular and Molecular Biology, Ohio State University |
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Collection: Biology and Medicine |
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| 9 | Introductory Biology Genetics Problems Complete Dominance through Multi-hybrid Crosses | ||
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Summary: is recessive G= green and g = white -- it is common to name genes for dominant alleles and to use upper case... of 1 green to 1 white (1G to 1 g) genotypic ratio of 1 Gg to 1 gg 2. Suppose that genes A, B, C and D... for each gene and (ii) one allele at each locus shows complete dominance Suppose that: Parent #1 |
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Source: Prestwich, Ken - Biology Department, College of the Holy Cross |
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Collection: Environmental Sciences and Ecology ; Biology and Medicine |
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| 10 | Genome Biology 2004, 5:R15 commentreviewsreportsdepositedresearchrefereedresearchinteractionsinformation | ||
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Summary: commentreviewsreportsdepositedresearchrefereedresearchinteractionsinformation Open Access2004Shepset al.Volume 5, Issue 3, Article R15Research The ABC transporter gene family... purpose, provided this notice is preserved along with the article's original URL. The ABC transporter gene... of encoding MDR ... |
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Source: Baillie, David - Department of Molecular Biology and Biochemistry, Simon Fraser University |
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Collection: Biology and Medicine |
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| 11 | Introductory Biology Genetics Problems Complete Dominance through Multi-hybrid Crosses | ||
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Summary: are the expected (i) phenotypic and (ii) genotypic ratios of the F2? 2. Suppose that genes A, B, C and D assort... independently of each other. Moreover, assume that: (i) there are only two types of alleles for each gene... with the phenotype ABcD who had true breeding parents with phenotypes ABcD and abcd ... |
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Source: Prestwich, Ken - Biology Department, College of the Holy Cross |
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Collection: Environmental Sciences and Ecology ; Biology and Medicine |
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| 12 | 2009-taebc ABC-Clio ebooks collection 1203titles ISBN URL | ||
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Summary: 2009-taebc ABC-Clio ebooks collection 1203titles ISBN URL 1 Arts & Humanities Acquisitions... Bastian, Jeannette Allis Libraries Unlimited Ebooks 2003 http://ebooks.abc- clio.com/?isbn=9780313052378 2... Libraries Unlimited Ebooks 2007 http://ebooks.abc- clio.com/?isbn=9780313094521 3 Arts & Humanities |
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Source: Wu, Yih-Min - Department of Geosciences, National Taiwan University |
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Collection: Geosciences |
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| 13 | 2000 Macmillan Magazines Ltd NATURE CELL BIOLOGY | VOL 2 | JULY 2000 | www.nature.com/ncb 399 | ||
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Summary: , Targeting scheme for disruption of the ABC1 gene. Upper panel, genomic organization of part of the ABC1... -of-function experiments. Analysis of mice harbouring a null mutation in the ABC1 gene and of HeLa cells transfected... mutant mice. The genomic region containing the ... |
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Source: Institut de Biologie Physico-Chimique CNRS, Physico-Chimie Moléculaire des Membranes Biologiques |
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Collection: Chemistry ; Biology and Medicine |
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| 14 | Ribosome recycling depends on a mechanistic link between the FeS cluster domain and a | ||
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Summary: and a conformational switch of the twin-ATPase ABCE1 Dominik Barthelmea , Stephanie Dinkelakera , Sonja-Verena Albersb... identified twin-ATPase ABCE1 in ribosome recycling. We demonstrate that the unique iron-sulfur cluster domain... and an ATP-dependent conformational switch of ABCE1 are essential both for ribosome binding and ... |
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Source: Bedwell, David M. - Department of Microbiology, University of Alabama at Birmingham |
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Collection: Biology and Medicine |
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| 15 | Computational Motor Control Workshop May 25, 2005, the Senate Auditorium of Ben-Gurion University, Israel. | ||
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Summary: Poster Award 4. Registration 5. Transprotation 6. Sponsors 7. Organizing committee Thank you for your... the ICNC is organizing transprotation, email Ms. Ruth Suchi ruthsu@savion.huji.ac.il for furhter details |
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Source: Karniel, Amir - Department of Biomedical Engineering, Ben-Gurion University |
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Collection: Engineering ; Biology and Medicine |
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| 16 | Readings and Problems ***Note: Quiz #2: Thurs. Oct. 28 | ||
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Summary: - Independent Assortment - Linkage - Gene mapping - 3 point test cross - Tetrad Analysis (mapping in fungi... ) - Extensions to Mendelian Genetics - Gene mutation - Chromosome mutation - Quantitative and population genetics... Two Characters Monohybrid Cross parents differ for a single character (single gene ); seed shape |
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Source: Innes, David J. - Department of Biology, Memorial University of Newfoundland |
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Collection: Environmental Sciences and Ecology |
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| 17 | Cell, Vol. 78, 203-209, July 29, 1994, Copyright 0 1994 by Cell Press The ABCs of Floral Homeotic Genes Review | ||
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Summary: ., Hartley, N., and Coen, E. #12;Review: The ABCs of Floral Homeotic Genes 209 (1993). Complementary floral... Cell, Vol. 78, 203-209, July 29, 1994, Copyright 0 1994 by Cell Press The ABCs of Floral Homeotic... Genes Review Detlef Weigel* and Elliot M. Meyerowltzt *Salk Institute for Biological Studies Plant |
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Source: Weigel, Detlef - Abteilung 6 Molekularbiologie, Max-Planck-Institut für Entwicklungsbiologie |
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Collection: Biology and Medicine |
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| 18 | SUPPLEMETARY NOTES Network inference from gene expression profiles: what "physical" | ||
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Summary: component of an ABC transporter involved in osmoprotection. Cluster n. 44 (of 8 genes) The TU malPQ, mal... (of 7 genes) uidB and uidC belong to the same TU uidABC. Cluster n. 46 (of 7 genes) sgaB and sga... SUPPLEMETARY NOTES for Network inference from gene ... |
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Source: Altafini, Claudio - Functional Analysis Sector, Scuola Internazionale Superiore di Studi Avanzati (SISSA) |
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Collection: Engineering ; Mathematics |
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| 19 | Tissue-specific transcriptional regulation has diverged | ||
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Summary: in the other species. ABC1 Abc1 Abc1 ABC1 5 kb / +5 kb 5 kb / +5 kb ~8,000 bijective genes in each species ~4... ) to 4,000 orthologous gene pairs in hepatocytes purified from human and mouse livers. Despite... . When the same protein binds the promoters of ... |
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Source: Gifford, David K. - Computer Science and Artificial Intelligence Laboratory & Department of Electrical Engineering and Computer Science, Massachusetts Institute of Technology (MIT) |
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Collection: Computer Technologies and Information Sciences ; Biotechnology |
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| 20 | NEWS AND COMMENTARY Evolutionary genetics............................................................... | ||
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Summary: ............................................................... When duplicated genes don't stick to the rules Y Van de Peer... assumption among bio- logists, and one that we teach our students, is that orthologous genes (ie homologous... genes in two different species) have identical or highly similar functions, while paralogs ... |
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Source: Gent, Universiteit - Department of Plant Systems Biology, Bioinformatics and Evolutionary Genomics Division |
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Collection: Biology and Medicine |
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| 21 | The P5abc Peripheral Element Facilitates Preorganization of the Tetrahymena Group I Ribozyme for Catalysis | ||
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Summary: The P5abc Peripheral Element Facilitates Preorganization of the Tetrahymena Group I Ribozyme... of these elements, P5abc, using the well-characterized ribozyme derived from the Tetrahymena group I intron... . Structural comparisons using solution-based free radical cleavage revealed that a ribozyme lacking P5abc (EP5 |
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Source: Doudna, Jennifer A. - Department of Molecular and Cell Biology, University of California at Berkeley; Herschlag, Dan - Department of Biochemistry, Stanford University |
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Collection: Biology and Medicine |
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| 22 | ABC transporters: 1, 2 or 4 substrate-binding Tiemen van der Heide and Bert Poolman | ||
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Summary: Chapter 6 65 ABC transporters: 1, 2 or 4 substrate-binding domains? Tiemen van der Heide and Bert... Poolman Summary Two families of ATP-binding Cassette (ABC) transporters have been detected, in which one... . Consequently, not one but two, or even four, substrate binding-sites are present in the functional ABC |
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Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution, |
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Collection: Biology and Medicine ; Environmental Sciences and Ecology |
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| 23 | The floral genome: an evolutionary history of gene duplication and shifting | ||
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Summary: .sciencedirect.com #12;The ABC model and MADS-box genes sequence conservation and shifting expression Developmental... identity (Figure 1b). The ABC model also specifies that A-function genes repress the expression of C... -function genes. Whereas the ABC model has ... |
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Source: dePamphilis, Claude - Department of Biology, Pennsylvania State University |
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Collection: Environmental Sciences and Ecology |
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| 24 | From Genes to Flower Patterns and Evolution: Dynamic Models of Gene | ||
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Summary: of ABC and non- ABC genes. Our analyses have shown that the floral organ specification GRN reaches six... eudicotyledoneous plants. Other aspects of evolu- tion of flower organ arrangement and ABC gene expression patterns... ; Boolean networks; Self-organization; ABC ... |
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Source: Aldana, Maximino - Centro de Ciencias Físicas, Universidad Nacional Autónoma de México |
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Collection: Physics |
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| 25 | List of publications Jacobs, M. H., T. v.d. Heide, A. J. Driessen, and W. N. Konings. 1996. Glutamate transport in | ||
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Summary: . Driessen, and W. N. Konings. 1995. Expression of the gltP gene of Escherichia coli in a glutamate transport... . Knol, and L. M. Veenhoff. 2000. Amplified gene expression in Gram-Positive bacteria, and purification... .Bacteriol. 182:203-206. Heide, T. v. d. and B. Poolman. 2000. Osmoregulated ABC transport system of Lactococcus |
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Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution, |
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Collection: Biology and Medicine ; Environmental Sciences and Ecology |
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| 26 | Download Lab. Handouts Download Lab. #3 and Print out 3 files | ||
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Summary: Test Cross C ABC B c ABc A C AbC b c Abc a Trihybrid Gametes Three Point Test Cross AaBbCc 3genes... ) - Inheritance and probability - Mendelian genetics in humans - Independent Assortment - Linkage - Gene mapping... - 3 point test cross - Tetrad Analysis (mapping in ... |
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Source: Innes, David J. - Department of Biology, Memorial University of Newfoundland |
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Collection: Environmental Sciences and Ecology |
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| 27 | Biology 2250 Principles of Genetics | ||
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Summary: A C AbC b c Abc a Trihybrid Gametes Three Point Test Cross AaBbCc 3 genes: Possibilities: 1. All... - Independent Assortment - Mendelian genetics in humans - Linkage - Gene mapping - Tetrad Analysis (mapping... in fungi) - Extensions to Mendelian Genetics - Gene mutation - Chromosome ... |
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Source: Innes, David J. - Department of Biology, Memorial University of Newfoundland |
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Collection: Environmental Sciences and Ecology |
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| 28 | Developmental Cell, Vol. 2, 135142, February, 2002, Copyright 2002 by Cell Press ReviewBuilding Beauty | ||
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Summary: to four (w14). (C) Diagram of ABC model, indicating do- mains of ABC gene activities. PISTILLATA (PI... transcription factor. Subsequently, it was discoveredAlthough the ABC model proposed that the homeotic genes... . Cloning of the ABC genes ... |
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Source: Weigel, Detlef - Abteilung 6 Molekularbiologie, Max-Planck-Institut für Entwicklungsbiologie |
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Collection: Biology and Medicine |
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| 29 | INSTITUTE OF PHYSICS PUBLISHING PHYSICAL BIOLOGY Phys. Biol. 3 (2006) 183189 doi:10.1088/1478-3975/3/3/003 | ||
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Summary: arrangement that skips a step, assuming the gene functional order is ABC. This arrangement is predicted... not concern the order of genes within an operon (that is, operons ABC and ACB are considered equivalent... .1088/1478-3975/3/3/003 Optimal gene partition into operons correlates with ... |
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Source: Alon, Uri - Departments of Molecular Cell Biology & Physics of Complex Systems, Weizmann Institute of Science |
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Collection: Biology and Medicine |
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| 30 | JOURNAL OF BACTERIOLOGY, Apr. 2009, p. 24232430 Vol. 191, No. 8 0021-9193/09/$08.00 0 doi:10.1128/JB.01464-08 | ||
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Summary: in close proximity to the gene for lactate permease. A comparison of genes in the vicinity of the lutABC... . subtilis separated the lutABC operon from the lutR, lutP, sigL, yvfG, and epsA-to-O gene cluster... -lactate utilization. Because all three genes in the ... |
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Source: Losick, Richard M. - Department of Molecular and Cellular Biology, Harvard University |
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Collection: Biotechnology ; Biology and Medicine |
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| 31 | JOURNAL OF BACTERIOLOGY, Apr. 2009, p. 24232430 Vol. 191, No. 8 0021-9193/09/$08.00 0 doi:10.1128/JB.01464-08 | ||
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Summary: in close proximity to the gene for lactate permease. A comparison of genes in the vicinity of the lutABC... . subtilis separated the lutABC operon from the lutR, lutP, sigL, yvfG, and epsA-to-O gene cluster... -lactate utilization. Because all three genes in the ... |
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Source: Losick, Richard M. - Department of Molecular and Cellular Biology, Harvard University |
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Collection: Biotechnology ; Biology and Medicine |
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| 32 | Gene Expression Dynamics Inspector v2.1 Input Data Format | ||
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Summary: -1 -1 -1 -1 -1 -1 }VEGF 0 -1 -1 -1 2 4 6 8 -1 -1 -1 -1 }EGF 0 -1 -1 -1 -1 -1 -1 -1 3 4 8 10 Gene ABC1... -0.9 -1 -1 -2.4 -5.5 0.1 0 -0.4 -0.9 -1.3 0 -0.5 Gene ABC2 -0.8 -0.4 -0.9 -1 -0.4 -0.4 0.2 -0.6 -0... .7 -0.5 0.6 2.2 Gene ABC3 0.6 0.9 0.6 0.3 0.7 1.1 0.9 1 0.4 ... |
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Source: Ingber, Donald E. - Vascular Biology Program, Harvard University |
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Collection: Biology and Medicine |
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| 33 | Summary and concluding remarks Joanna M. Lubelska, Sonja-V. Albers and Arnold J.M. Driessen | ||
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Summary: of the maltose ABC transporter of E. coli, Thermococcus litoralis and Figure.1. Operon composition of the genes... of the arabinose ABC transporter genes, and thus potential binding partners for the regulatory domain of AraV, we... dependent ABC transporter. In order to identify ... |
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Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution, |
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Collection: Biology and Medicine ; Environmental Sciences and Ecology |
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| 34 | JOURNAL OF BACTERIOLOGY, Jan. 2006, p. 464468 Vol. 188, No. 2 0021-9193/06/$08.00 0 doi:10.1128/JB.188.2.464468.2006 | ||
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Summary: -nitrogenase activity when added to V-starved cells was about 3 10 9 M. The genes for an ABC-type vanadate transport... system, vupABC, were found in A. variabilis about 5 kb from the major cluster of genes encoding the V... -nitrogenase, and like those genes, the ... |
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Source: Thiel, Teresa - Department of Biology, University of Missouri-St. Louis |
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Collection: Biotechnology ; Biology and Medicine |
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| 35 | Nature Macmillan Publishers Ltd 1998 NATURE |VOL 395 |8 OCTOBER 1998 |www.nature.com 561 | ||
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Summary: a). Subsequent molecular analysis showed that region-specific activity of the ABC genes is largely... regulated at the transcriptional level3 . Little is known about how the initial pattern of ABC gene... point in their specific domains. Candidates for upstream regulators of flower-specific ... |
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Source: Lee, Ilha - School of Biological Sciences, Seoul National University; Weigel, Detlef - Abteilung 6 Molekularbiologie, Max-Planck-Institut für Entwicklungsbiologie |
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Collection: Biology and Medicine |
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| 36 | Seminars in Cell & Developmental Biology 21 (2010) 100107 Contents lists available at ScienceDirect | ||
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Summary: genes Flower development Inflorescence development ABC-model Evo-devo a b s t r a c t Angiosperms... and regulation of TM6 genes was not included in the original ABC-model. An early indication that B-function gene... years after the ABC-model was originally proposed, ... |
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Source: |
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Collection: Biology and Medicine |
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| 37 | Copyright 0 1996 by the Genetics Society of America Evolution of Antennapedia-Class Homeobox Genes | ||
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Summary: Copyright 0 1996 by the Genetics Society of America Evolution of Antennapedia-Class Homeobox Genes... for publication September 21, 1995 ABSTRACT Antennapedia (Antp)-classhomeobox genes are involved... that the 13cognate group genes of this gene family can be divided into two major groups, i.e., groups I and ... |
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Source: Zhang, Jianzhi - Department of Ecology and Evolutionary Biology, University of Michigan |
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Collection: Biology and Medicine |
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| 38 | So consider the cross ABC x abc where all three genes are linked. We'll be able to determine when crossovers occur between each pair of genes. Let's draw up each of these | ||
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Summary: So consider the cross ABC x abc where all three genes are linked. We'll be able to determine when... crossovers occur between each pair of genes. Let's draw up each of these possibilities assuming there are two... paired at pachytene of meiosis. One homolog has two chromatids with the dominant alleles of ... |
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Source: Shore, Joel S. - Department of Biology, York University (Toronto) |
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Collection: Biology and Medicine |
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| 39 | R E V I E W A R T I C L E The fate of new bacterial genes | ||
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Summary: R E V I E W A R T I C L E The fate of new bacterial genes Chih-Horng Kuo1 & Howard Ochman1,2 1... . DOI:10.1111/j.1574-6976.2008.00140.x Editor: Michael Galperin Keywords genome evolution; lateral gene... transfer; interaction networks; gene inventories. Abstract Bacteria experience a continual influx of novel |
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Source: Ochman, Howard - Department of Ecology and Evolutionary Biology, Yale University |
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Collection: Environmental Sciences and Ecology ; Biology and Medicine |
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| 40 | Arabidopsis: Flower Development and | ||
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Summary: ). The basic tenets of the ABC model are as follows: (1) each of the A, B and C classes of homeotic gene... of a developing flower consistent with where these genes have activity in the ABCE model (Figure 2b, c and d... to be shared among all angiosperms. Early acting genes establish ... |
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Source: Krizek, Beth - Department of Biological Sciences, University of South Carolina |
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Collection: Biology and Medicine |
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| 41 | Bindosome assembly system Identification of a system required for the functional assembly of | ||
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Summary: the corresponding genes were re-introduced in these cells. Concomitantly, basABC and basEF cells were severely... , two knockout strains were constructed: a triple knockout deleting the three putative pilin genes, basABC... the deletion of the basABC and basEF genes ... |
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Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution, |
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Collection: Biology and Medicine ; Environmental Sciences and Ecology |
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| 42 | And then there were many: MADS goes genomicq | ||
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Summary: . and Meyerowitz, E.M. (1994) The ABCs of floral homeotic genes. Cell 78, 203209 18 Theißen, G. (2001) Development... -Schiller-University, Department of Genetics, Philosophenweg 12, D-07743 Jena, Germany During the past decade, MADS-box genes have... of this complex gene family on a much larger scale. ... |
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Source: Gent, Universiteit - Department of Plant Systems Biology, Bioinformatics and Evolutionary Genomics Division |
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Collection: Biology and Medicine |
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| 43 | Plant Biology Seminar Series -Fall 2000 Fridays, 11:30 am, 138 Foran Hall, Cook Campus | ||
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Summary: Chen, Waksman Institute, Rutgers University Chaim Frenkel Beyond the ABC Model: New Genes for Floral... Approaches to Identifying Genes in ABA Signal Transduction in Arabidopsis Oct 13 Jerry Cohen, University... Functional Genomics Nov 10 Simon Geir Moller, Rockefeller University Eric Lam An ABC-like Protein ... |
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Source: Rutgers University, Department of Entomology, Center for Vector Biology |
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Collection: Biology and Medicine |
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| 44 | Summary and concluding remarks The archaeon Pyrococcus furiosus | ||
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Summary: family, two distinct families within the ABC binding proteins. The gene encoding the binding protein, cbt... these genes due to a defect in the inducing systems. In the genome of P. furiosus several ABC... were studied during this thesis work. Three inducible ATP-binding cassette (ABC-) ... |
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Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution, |
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Collection: Biology and Medicine ; Environmental Sciences and Ecology |
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| 45 | parsimony should be performed on two levels as follows: (1) Separate gene trees are | ||
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Summary: {(AB)C}, whereas the histories of the other two genes are congruent with the species phylogeny... ., 1997). For exam- ple, if a true gene tree is (AB)C and the true species tree is (AC)B, then any... parsimony should be performed on two levels as follows: (1) Separate gene trees are ... |
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Source: Page, Roderic - Division of Environmental and Evolutionary Biology, Institute of Biomedical and Life Sciences, University of Glasgow |
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Collection: Environmental Sciences and Ecology |
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| 46 | Supplementary Methods, Results, Tables and Figures Systems metabolic engineering of Escherichia coli for L- | ||
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Summary: number plasmid pBRThrABC. To make pBRThrABCR, rhtC gene was amplified with primers FrhtCEcBa and Rrht... , the TH07C (pBRThrABC) strain produced 0.71 g/l of Thr. Genes that were10 found to be significantly... that of the ppc gene decreased to 0.43-fold. As expected, the ... |
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Source: Korea Advanced Institute of Science and Technology, Department of Chemical and Biomolecular Engineering, Metabolic & Biomolecular Engineering National Research Laboratory |
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Collection: Engineering ; Biotechnology |
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| 47 | A Note on the Fixed Parameter Tractability of the Gene-Duplication Problem | ||
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Summary: , all the input gene trees are rooted triplets. In particular, let {ab|c, bc|d, cd|e, de|a} be the set... 1 A Note on the Fixed Parameter Tractability of the Gene-Duplication Problem Mukul S. Bansal... and Ron Shamir Abstract-- The NP-hard gene-duplication problem takes as input a collection of ... |
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Source: Shamir, Ron - School of Computer Science, Tel Aviv University |
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Collection: Computer Technologies and Information Sciences |
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| 48 | Applying Automatically Derived Gene-Groups to Automatically Predict and | ||
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Summary: -ala- D-ala ligase), and yab genes code for oxidoreductases and ABC transportor proteins. Thus... #12;Applying Automatically Derived Gene-Groups to Automatically Predict and Refine Metabolic... the information of automatically derived, functionally similar gene-groups and orthologs (functionally equivalent |
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Source: Bansal, Arvind K. - Department of Computer Science, Kent State University |
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Collection: Computer Technologies and Information Sciences |
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| 49 | Concerted and Birth-and-Death Evolution | ||
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Summary: of new genetic systems, gene conversion, MHC genes, ribosomal RNA Abstract Until around 1990, most... multigene families were thought to be sub- ject to concerted evolution, in which all member genes... of a family evolve as a unit in concert. However, phylogenetic analysis of MHC and other immune system ... |
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Source: Nei, Masatoshi - Department of Biology, Pennsylvania State University |
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Collection: Environmental Sciences and Ecology ; Biology and Medicine |
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| 50 | Likelihood-Free Parallel Tempering. Meli Baragatti1,2,, Agns Grimaud2, Denys Pommeret2 | ||
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Summary: Abstract Approximate Bayesian Computational (ABC) methods (or likelihood-free methods) have appeared... or computationally intractable. Several ABC methods have been proposed: Monte Carlo Markov Chains (MCMC) methods have... al. [2011]. Until now, while ABC-MCMC methods remain the reference, sequential ABC ... |
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Source: Ecole Polytechnique, Centre de mathématiques |
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Collection: Mathematics |
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| 51 | nature biotechnology VOLUME 19 MARCH 2001 http://biotech.nature.com Alternative splicing increases protein diver- | ||
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Summary: a puta- tive gene X that has three exons (A, B, and C) and two splice variants, ABC and AC. To design... , proteins to be encoded by the same gene. It can be specific to tissues, stress conditions... of different splice vari- ants of the same gene usually results in a typ- ical gapped pattern of alignment |
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Source: Sorek, Rotem - Department of Molecular Genetics, Weizmann Institute of Science |
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Collection: Biology and Medicine |
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| 52 | ABC transporters ABC transporter architecture and regulatory roles of | ||
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Summary: regulatory domains. Regulation of many ABC transporters takes place at the level of gene expression. Most ABC... ABC transporters 9 Chapter 2 ABC transporter architecture and regulatory roles of accessory domains... of the architecture of ABC transporters and dissect ... |
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Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution, |
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Collection: Biology and Medicine ; Environmental Sciences and Ecology |
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| 53 | A Hybrid Micro-macroevolutionary Approach to Gene Tree Reconstruction | ||
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Summary: A Hybrid Micro-macroevolutionary Approach to Gene Tree Reconstruction Dannie Durand1 , Bjarni V... Department of Biological Sciences, Carnegie Mellon University bvernot@cs.cmu.edu Abstract. Gene family... processes (e.g., gene duplication and loss), yet macroevolutionary considerations are rarely incorporated |
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Source: Durand, Dannie - Departments of Computer Science & Biological Sciences, Carnegie Mellon University |
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Collection: Computer Technologies and Information Sciences ; Biology and Medicine |
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| 54 | A Hybrid Micro-Macroevolutionary Approach to Gene Tree Reconstruction | ||
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Summary: A Hybrid Micro-Macroevolutionary Approach to Gene Tree Reconstruction Dannie Durand1 , Bjarni V... Department of Biological Sciences, Carnegie Mellon University bvernot@cs.cmu.edu Abstract. Gene family... processes (e.g., gene duplication and loss), yet macroevolutionary considerations are rarely incorporated |
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Source: Batzoglou, Serafim - Department of Computer Science, Stanford University |
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Collection: Biotechnology ; Computer Technologies and Information Sciences |
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| 55 | VERTEBRATE PHYLOGENOMICS: RECONCILED TREES AND GENE DUPLICATIONS | ||
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Summary: VERTEBRATE PHYLOGENOMICS: RECONCILED TREES AND GENE DUPLICATIONS R.D.M. PAGE, J.A. COTTON Division... -mail: r.page@bio.gla.ac.uk Ancient gene duplication events have left many traces in vertebrate genomes... . Rec- onciled trees represent the difierences between gene family trees and the species phylogeny those |
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Source: Cotton, James - School of Biological and Chemical Sciences, Queen Mary, University of London |
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Collection: Environmental Sciences and Ecology ; Biology and Medicine |
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| 56 | VERTEBRATE PHYLOGENOMICS: RECONCILED TREES AND GENE DUPLICATIONS | ||
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Summary: VERTEBRATE PHYLOGENOMICS: RECONCILED TREES AND GENE DUPLICATIONS R.D.M. PAGE, J.A. COTTON Division... -mail: r.page@bio.gla.ac.uk Ancient gene duplication events have left many traces in vertebrate genomes... . Rec- onciled trees represent the differences between gene family trees and the species phylogeny those |
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Source: Page, Roderic - Division of Environmental and Evolutionary Biology, Institute of Biomedical and Life Sciences, University of Glasgow |
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Collection: Environmental Sciences and Ecology |
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| 57 | Horticulturae ISHS Contact | ||
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Summary: genetics, homeotic genes, lily, MADS-box genes, transcription factors Abstract: Because lily (Lilium... longiflorum Thunb.) is an important cut-flower crop, molecular characterisation of genes that are involved... ABC model for flower development emerged more than 10 years ago from studies with Arabidopsis ... |
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Source: Benedito, Vagner - Division of Plant and Soil Sciences, West Virginia University |
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Collection: Biology and Medicine |
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| 58 | Gene Trees, Species Trees, and Species Luay Nakhleh Derek Ruths | ||
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Summary: a single parental gene (haploid). the gene tree is represented by A(BC) while the species tree is (AB)C... (Figure 1.8), there are three possible types of gene tree, (AB)C, (AC)B and A(BC). Let Prob[(AB)C], Prob... of the three types of ... |
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Source: Nakhleh, Luay K. - Department of Computer Science, Rice University |
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Collection: Biology and Medicine ; Computer Technologies and Information Sciences |
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| 59 | Knowl Inf Syst (2006) DOI 10.1007/s10115-006-0031-9 | ||
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Summary: Daxin Jiang · Jian Pei · Murali Ramanathan · Chuan Lin · Chun Tang · Aidong Zhang Mining gene... sampletime microarray data: a coherent gene cluster discovery approach Received: 17 September 2004 / Revised: 14 March... applications. In this paper, we explore a novel type of genesampletime microarray data sets that ... |
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Source: Pei, Jian - School of Computing Science, Simon Fraser University, CA |
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Collection: Computer Technologies and Information Sciences |
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| 60 | CCoonnttrriibbuuttiioonn ooff GGllnnRR RReegguulloonn ttoo VViirruulleennccee Site-Specific Contributions of Glutamine-Dependent | ||
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Summary: P, and glnQ, these included genes encoding transcriptional regulators (e.g., SPD0096, SPD1524), ABC... -Specific Contributions of Glutamine-Dependent Regulator GlnR and GlnR-Regulated Genes to Virulence of Streptococcus... A gene. To assess the contribution of the GlnR- regulon to virulence, D39 wild-type and ... |
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|
Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution, |
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Collection: Biology and Medicine ; Environmental Sciences and Ecology |
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| 61 | A genomic survey of the distribution of ABC-transporters in the hyperthermophilic archaeal Pyrococcus species | ||
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Summary: number of putative ABC-transporters (Table 2). The genes encoding the different components... of the putative ABC-transporter are usually organized within gene clusters. In these studies, a set of genes... is called a putative ABC-transporter when the ... |
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|
Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution, |
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Collection: Biology and Medicine ; Environmental Sciences and Ecology |
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| 62 | VERTEBRATE PHYLOGENOMICS: RECONCILED TREES AND GENE DUPLICATIONS | ||
|
Summary: VERTEBRATE PHYLOGENOMICS: RECONCILED TREES AND GENE DUPLICATIONS R.D.M. PAGE, J.A. COTTON Division... -mail: r.page@bio.gla.ac.uk Ancient gene duplication events have left many traces in vertebrate genomes... . Rec- onciled trees represent the di#11;erences between gene family trees and the species phylogeny |
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Source: Cotton, James - School of Biological and Chemical Sciences, Queen Mary, University of London |
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Collection: Environmental Sciences and Ecology ; Biology and Medicine |
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| 63 | Operon prediction by comparative genomics: an application to the Synechococcus sp. WH8102 genome | ||
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Summary: operons such as the well-known carboxysome operon consisting of 8 genes (data not shown) and 19 ABC... transporter operons. ABC transporters are composed of multiple subunits often found on genes in operons (25... . A group of consecutive genes is considered as a candidate operon if both ... |
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Source: DOE Genomes to Life Program |
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Collection: Biology and Medicine |
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| 64 | The Trichoplax PaxB Gene: A Putative Proto-PaxA/B/C Gene Predating the Origin of Nerve and Sensory Cells | ||
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Summary: ; Miller et al. 2000) to the Trichoplax PaxABC gene, requires only a single step, the incorporation... of the octapeptide. From this ``fully loaded'' ancestral PaxABC gene other Pax genes may be derived by subsequent... that the ancestral PaxABC ... |
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Source: DeSalle, Rob - Department of Entomology, American Museum of Natural History |
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Collection: Biology and Medicine |
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| 65 | Model criticism based on likelihood-free inference, with an application to protein network evolution | ||
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Summary: (ABC). We aug- ment the likelihood of the data with unknown error terms that correspond to freely... of incorporating model diagnostics within an ABC framework, and demonstrate how this method diagnoses model... with evolution dominated by link turnover or lateral gene transfer alone. Bayesian inference | intractable |
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Source: Wiuf, Carsten - Bioinformatics Research Center, University of Aarhus |
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Collection: Biotechnology |
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| 66 | Copyright 2005 by the Genetics Society of America DOI: 10.1534/genetics.104.027607 | ||
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Summary: of Subfunctions and Modular Gene Regulation Allan Force,*,1 William A. Cresko,, F. Bryan Pickett,§ Steven R... novel pathways to morphological evolution. Many aspects of gene complexity in multicellular eukaryotes... , with the adaptive exploitation of such complexity occurring secondarily. EUKARYOTIC gene regulation is a ... |
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Source: Lynch, Michael - Department of Biology, Indiana University |
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Collection: Biology and Medicine |
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| 67 | Cell, Vol. 93, 951960, June 12, 1998, Copyright 1998 by Cell Press The C. elegans Cell Corpse | ||
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Summary: Engulfment Gene ced-7 Encodes a Protein Similar to ABC Transporters In the nematode Caenorhabditis elegans... ., 1994), the mouse ABC2 (Luciani et al., 1994), the human ABC-Cthe ced-7 gene. The alleles n1996 and n... ). The 220-kDa rim gene lin-39. Cell 74, 4355. ... |
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Source: Horvitz, H. Robert - Department of Biology, Massachusetts Institute of Technology (MIT) |
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Collection: Biology and Medicine |
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| 68 | Graduate School ETD Form 9 (Revised 12/07) | ||
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Summary: system for the EBDBN(-) and ABC-Net methods. Blue and red solid edges in the network represent gene-to-gene... in the S.O.S DNA repair system for the ABC-Net method. Dotted gray lines represent gene-to-gene in... (s): ____________________________________ ____________________________________ Approved by: Head ... |
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Source: Ecole Polytechnique, Centre de mathématiques |
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Collection: Mathematics |
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| 69 | RESEARCH ARTICLE Open Access Systematic discovery of unannotated genes in | ||
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Summary: the same genes in non-WGD species. ABC1 and YBR230W-A have an unusual history because they no longer retain... of the original gene. Consequently, ABC1 and YBR230W-A cannot be aligned to one another, but they both align... - siae ABC1 (501 codons) is a large single-exon ... |
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Source: Wolfe, Kenneth H. - Genetics Department, Trinity College, University of Dublin |
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Collection: Biotechnology ; Environmental Sciences and Ecology |
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| 70 | Conservation and canalization of gene expression during angiosperm diversification accompany the | ||
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Summary: Conservation and canalization of gene expression during angiosperm diversification accompany... perianth from the male genetic program of seed plants. ABCE model | fading borders | floral evolution... developmental regulators (79). These insights are encapsulated in the ABCE model for the genetic control |
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Source: dePamphilis, Claude - Department of Biology, Pennsylvania State University |
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Collection: Environmental Sciences and Ecology |
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| 71 | News in Science -Ancient bacteria take a breath -07/02/2000 http://www.abc.net.au/cgi-bin/common/printfriendly.pl?/science/news/st... 1 of 2 3/5/2008 12:55 PM | ||
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Summary: News in Science - Ancient bacteria take a breath - 07/02/2000 http://www.abc.net... in Science - Ancient bacteria take a breath - 07/02/2000 [This is the print version of story http://www.abc... sensing as well as transport and storage. The research team cloned the genes expressing these proteins |
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Source: Alam, Maqsudul - Department of Microbiology, University of Hawai'i at Manoa |
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Collection: Environmental Sciences and Ecology ; Biology and Medicine |
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| 72 | PROTEIN INTERACTIONS AND DISEASE PHENOTYPES IN THE ABC TRANSPORTER SUPERFAMILY | ||
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Summary: in gene organization, human ABC transporters are likely to have a quarternary structure similar to those... PROTEIN INTERACTIONS AND DISEASE PHENOTYPES IN THE ABC TRANSPORTER SUPERFAMILY LIBUSHA KELLY1... Francisco, CA 94158, USA. ABC transporter proteins couple the energy of ATP binding and hydrolysis |
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Source: Sali, Andrej - Department of Biochemistry and Biophysics, University of California at San Francisco |
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Collection: Biology and Medicine ; Biotechnology |
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| 73 | Functional and comparative genomic analyses of an operon involved in fructooligosaccharide utilization | ||
|
Summary: inactivation of the genes encoding the ABC transporter substrate-binding protein and the fructosidase reduced... for ABC transporters, PTS transporters, transcription regulators, fructosidases, and fructokinases. Gene... . 15 8961 MICROBIOLOGY #12;variable genes, with ... |
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Source: Klaenhammer, Todd R. - Department of Food Science, North Carolina State University |
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Collection: Biology and Medicine ; Biotechnology |
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| 74 | Operon prediction by comparative genomics: an application to the Synechococcus sp. WH8102 | ||
|
Summary: genomics approach. A group of consecutive genes is considered as a candidate operon if both their gene... programs, and used in our prediction method. These include the prediction of conserved gene functions... is that it does not require many experimental data (such as gene expression data and pathway data) ... |
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|
Source: Chen, Xin - Division of Mathematical Sciences, Nanyang Technological University |
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Collection: Mathematics |
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| 75 | Syst. Biol. 58(1):3554, 2009 Copyright c Society of Systematic Biologists | ||
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Summary: [((AB)C)] are used to indicate the probabilities of the rooted triple (AB)C and the gene tree ((AB)C), respectively... . The expression P[{ABC}] is used to denote the probability that {ABC} is a clade on the gene tree. ASYMPTOTIC... for a large enough number of ... |
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|
Source: Bryant, David - Department of Biology, University of Otago |
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Collection: Mathematics |
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| 76 | Syst. Biol. 58(1):3554, 2009 Copyright c Society of Systematic Biologists | ||
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Summary: . For example, if a node on a gene tree is the root of the subtree ((AB)C), then this node corresponds... .) to refer both to a taxon and to the gene lineage sampled from that taxon. We use the notation (AB)C... triple (AB)C and the gene tree ... |
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|
Source: Rosenberg, Noah - Departments of Human Genetics & Biostatistics, University of Michigan |
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Collection: Biotechnology |
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| 77 | Supplementary Materials for SOS Chenlei Leng | ||
|
Summary: '' are presented here. 1 Brown Data Set Table 1: The chosen top 30 genes for the Brown Data set UID Name GENE313X... ESTs, Weakly similar to open reading frame [M.musculus] GENE3227X HSA272195 centaurinalpha 2 protein... GENE6192X SPINT2 serine protease inhibitor, Kunitz type, 2 ... |
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Source: Leng, Chenlei - Department of Statistics and Applied Probability, National University of Singapore |
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Collection: Mathematics |
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| 78 | Boolean games revisited: compact preference representation in games Elise Bonzon, bonzon@irit.fr | ||
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Summary: is acyclic then G has one and only one SPNE. Let G = (A,V,,) with A = {1,2}, V = {a,b,c}, 1 = {a,c}, 2 = {b... }, 1 = a;(¬b,c) , 2 = (¬b,¬c);¬a . P1 Disc abc abc abc abc abc abc abc ... |
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|
Source: Bonzon, Elise - UFR de Mathématiques et Informatique, Université René Descartes |
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Collection: Computer Technologies and Information Sciences |
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| 79 | Linkage and Tetrad Analysis | ||
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Summary: can be used in estimating map distance between genes without need for a mapping function... ... Let's see which tetrad types are made under various circumstances: Goal > x How can we see if 2 genes... one crossover between a gene and its centromere ... Let's see which tetrad types are made under |
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Source: Doebley, John - Department of Medical Genetics, University of Wisconsin at Madison |
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Collection: Renewable Energy ; Biology and Medicine |
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| 80 | Introduction ThehallmarkofHodgkinlymphoma(HL)isthepresence | ||
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Summary: next examined which set of genes distinguishes the LCLs, HL and ABC-type DLCL cell lines from the group... 111 | Number 4 Figure 1 The gene expression profile of HL lines is related to that of LCL and ABC... HL lines, LCL, and ABC-type DLCL lines versus BL and GC-type DLCL. The ... |
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Source: Dalla-Favera, Riccardo - Institute for Cancer Genetics & Department of Genetics and Development, Columbia University |
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Collection: Biology and Medicine |
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| 81 | A Human-Curated Annotation of the Candida albicans Genome | ||
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Summary: for the identification of putative genes. We have reviewed the entire assembly, both by hand and with additional... bioinformatic resources, to accurately map and describe 6,354 genes and to identify 246 genes whose original... . Comparison with other fungal genomes permitted the identification of numerous fungus-specific ... |
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Source: Sherlock, Gavin - Department of Genetics, Stanford University |
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Collection: Biology and Medicine |
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| 82 | counteracted by HIV-1 Vif [21,22]. It is possible that Vif might be fully functional and active in interactions that | ||
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Summary: .e. 29% of the proteome under study). The largest group of paralogs (.50 genes) encodes ABC... and corresponds to the ABC-type transport superfamily, which is known to be the largest group of paralogous genes... . (1987) The sor gene of HIV-1 is required for efficient virus transmission in ... |
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Source: Gent, Universiteit - Department of Plant Systems Biology, Bioinformatics and Evolutionary Genomics Division |
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Collection: Biology and Medicine |
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| 83 | Transformation of follicular lymphoma to diffuse large-cell lymphoma: Alternative patterns with | ||
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Summary: with increased or decreased expression of c-myc and its regulated genes Izidore S. Lossos* , Ash A. Alizadeh... lymphoma (DLBCL). We compared the gene-expression profiles between transformed DLBCL and their antecedent... FL. No genes were observed to increase or decrease their expression in all of the cases |
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|
Source: Botstein, David - Lewis-Sigler Institute for Integrative Genomics & Department of Molecular Biology, Princeton University |
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Collection: Biology and Medicine |
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| 84 | Antiquity and Evolution of the MADS-Box Gene Family Controlling Flower Development in Plants | ||
|
Summary: flower formation and are often referred to as floral MADS- box genes. In particular, the ``ABC'' model... ). More recently, this ABC model was amended to include an interaction with an additional class of genes... Antiquity and Evolution of the MADS-Box Gene Family Controlling Flower ... |
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|
Source: Nei, Masatoshi - Department of Biology, Pennsylvania State University |
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Collection: Environmental Sciences and Ecology ; Biology and Medicine |
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| 85 | Individual gene cluster statistics in noisy maps Narayanan Raghupathy1 | ||
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Summary: that bracket the MHCII region on human chromosome 6, a region also containing COL, ABC, RING and PSMB genes... Individual gene cluster statistics in noisy maps Narayanan Raghupathy1 , Dannie Durand2 1... , statistical tests to determine whether observed similarities in gene content are due to his- tory or ... |
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Source: Durand, Dannie - Departments of Computer Science & Biological Sciences, Carnegie Mellon University |
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Collection: Computer Technologies and Information Sciences ; Biology and Medicine |
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| 86 | Learning Representations for Evolutionary Computation | ||
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Summary: evolved genes. The transformation from phenotype to genotype is not always unique, e.g. the genotypes 'ABc... successful combinations of genes in the population and combines them into higher level evolved genes... . The extraction is repeated iteratively, allowing genes to evolve that ... |
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|
Source: Yao, Xin - School of Computer Science, University of Birmingham |
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Collection: Computer Technologies and Information Sciences |
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| 87 | A day in the life of Microcystis aeruginosa strain PCC 7806 as revealed by a transcriptomic analysis | ||
|
Summary: -dark cycle, peaking at 07:30 (Fig. 7B and Table S2). Three ABC-type phosphate transporter genes (pst... are the simplest organisms known to exhibit circadian rhythms. The kaiABC genes have been identified as essential... 7806 was constructed and used to study the dynamics of gene ... |
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|
Source: Ecole Polytechnique, Centre de mathématiques |
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|
Collection: Mathematics |
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| 88 | JOURNAL OF BACTERIOLOGY, Oct. 2010, p. 54895498 Vol. 192, No. 20 0021-9193/10/$12.00 doi:10.1128/JB.00725-10 | ||
|
Summary: R, encoded by the gene upstream of ebpABC, is a tran- scription activator of the ebpABC genes. It has been... have a negative effect on EbpC expression. ebpA is the first gene of the ebpABC operon (35), and its... A insertion mutants had MFIs of 3 and 5% of that for ... |
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Source: van Hoof, Ambro - Department of Microbiology and Molecular Genetics, University of Texas Health Science Center Houston |
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Collection: Biology and Medicine |
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| 89 | Psychosis and autism as diametrical disorders of the social brain | ||
|
Summary: relative effects from imprinted genes with maternal expression, which engender a general pattern... effects of paternally expressed genes, which mediate overgrowth. This hypothesis provides a simple yet... and metabolic systems affected by genomic imprinting, notably via effects of genes that are imprinted |
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Source: Haig, David - Department of Organismic and Evolutionary Biology, Harvard University |
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Collection: Environmental Sciences and Ecology |
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| 90 | Structure and Dynamics of Large Biological Molecules: ATP-Binding Cassette (ABC) Transporters | ||
|
Summary: Structure and Dynamics of Large Biological Molecules: ATP-Binding Cassette (ABC) Transporters Jung... dynamics simulations (200,000 atoms for over 1 microsecond) have been performed on the JuGene supercomputer... Blue Gene series) is making an essen- tial contribution. Well known applications include drug design |
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|
Source: Jones, R. O.- Institut für Festkörperforschung, Forschungszentrum Jülich |
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Collection: Materials Science |
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| 91 | Gene tree discordance, phylogenetic inference and the multispecies | ||
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Summary: to the gene tree (A(BC)). (b) Gene duplication and loss: through extinction of lineages, gene duplication can... to B and C. The two gene trees depicted in (c) are ((AB)C) (black) and (A(BC)) (orange). Hybridization... tree is ... |
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|
Source: Rosenberg, Noah - Departments of Human Genetics & Biostatistics, University of Michigan |
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|
Collection: Biotechnology |
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| 92 | BIOINFORMATICS Vol. 00 no. 00 2008 | ||
|
Summary: of gene lineages from one population to another. In the current stage of DIY ABC, this has not yet been... BIOINFORMATICS Vol. 00 no. 00 2008 Pages 18 Inferring population history with DIY ABC: a user... involving a small number of samples. We propose here a computer program (DIY ABC) for inference based |
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|
Source: Robert, Christian P. - Centre De Recherche en Mathématiques de la Décision, Université Paris-Dauphine |
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|
Collection: Mathematics |
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| 93 | JOURNAL OF BACTERIOLOGY, Dec. 2002, p. 67146720 Vol. 184, No. 23 0021-9193/02/$04.00 0 DOI: 10.1128/JB.184.23.67146720.2002 | ||
|
Summary: B-dependent receptor, and a hemoglobin- binding protein, respectively. The genes encoding the peptide ABC transport... membrane protein and an ATP-binding protein with homology to ABC transport proteins. Other transport genes... sources. The iron transport genes ... |
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|
Source: Boley, Daniel - Department of Computer Science and Engineering, University of Minnesota |
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Collection: Computer Technologies and Information Sciences |
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| 94 | Plant Pathology (2009) 58, 547555 Doi: 10.1111/j.1365-3059.2008.02013.x 2009 The Authors | ||
|
Summary: compilation © 2009 BSPP 547 Blackwell Publishing Ltd Identification and location of Stb9, a gene... of a gene for resistance to septoria tritici blotch (STB) in two spring wheat cultivars, Courtot and Tonic... . The gene, named Stb9, confers resistance to Mycosphaerella graminicola isolate IPO89011. It was mapped |
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|
Source: Brown, James - Department of Disease and Stress Biology, John Innes Centre |
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Collection: Biology and Medicine |
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| 95 | Plant Pathology (2007) 56, 7378 Doi: 10.1111/j.1365-3059.2006.01499.x 2006 John Innes Centre | ||
|
Summary: ., 2004a,b,c; Chartrain, 2004; Chartrain et al., 2005a,b). A gene-for-gene relationship has been... Journal compilation © 2006 BSPP 73 Blackwell Publishing Ltd A gene in European wheat cultivars... , University of Zürich, Zollikerstrasse 107, CH-8008 Zürich, Switzerland Genes for specific resistance |
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|
Source: Brown, James - Department of Disease and Stress Biology, John Innes Centre |
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|
Collection: Biology and Medicine |
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| 96 | LmrCD is a major MDR transporter in Lactococcus lactis | ||
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Summary: 1363 and four drug resistant mutants. Expression ratiob Gene namea Daur Ethr Rhor Cholr ABC superfamily... . The ABC (20 genes) and MFS transporters (18 genes) are the most abundant types of drug transporters, while... transport system, a cytochrome d ABC transport ... |
|||
|
Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution, |
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|
Collection: Biology and Medicine ; Environmental Sciences and Ecology |
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| 97 | Sun Kim at CGB on Oct 20, 2005, Page 10 A Level-wise algorithm for Enumerating Hybrid Patterns | ||
|
Summary: oligopeptide ABC transporter gene team from the three genomes. #12;Sun Kim at CGB on Oct 20, 2005, Page 19 >6... Parameters 1. Tz: the gene set size constraint: How many genes should co-occur to be biologically meaningful... constraint How many genomes should the set of genes be ... |
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|
Source: Yang, Jiong - Department of Electrical Engineering and Computer Sciences, Case Western Reserve University |
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|
Collection: Computer Technologies and Information Sciences |
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| 98 | JOURNAL OF BACTERIOLOGY, Oct. 2007, p. 70987104 Vol. 189, No. 19 0021-9193/07/$08.00 0 doi:10.1128/JB.00643-07 | ||
|
Summary: of Flagellar Gene Operons and Secondary Flagellar Systems Renyi Liu1 and Howard Ochman1,2 * Department... and the structure and formation of flagellar gene operons over the course of bacterial evolution. Secondary (i... - and Gammaproteobacteria. The order and organization of flagellar genes have undergone extensive shuffling |
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|
Source: Ochman, Howard - Department of Ecology and Evolutionary Biology, Yale University |
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|
Collection: Environmental Sciences and Ecology ; Biology and Medicine |
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| 99 | THE JOURNAL OF GENE MEDICINE RESEARCH ARTICLE J Gene Med 2008; 10: 583592. | ||
|
Summary: -driven tTA and the SYN-driven GAL4p65 in a single backbone; (4) LV-1×GfaABC1D-tTA, in which the tTA gene... of the SYN and the GfaABC1D promoter in the TA-enhanced system were well retained. In vivo analysis of gene... THE JOURNAL OF GENE MEDICINE RESEARCH ARTICLE J ... |
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|
Source: Bristol, University of - Department of Physiology and Pharmacology, Viral Gene Transfer Lab. |
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Collection: Biology and Medicine |
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| 100 | Biochemical Society Transactions (2002) Volume 30, part 4 1 Welch, R. M. (1995) Crit. Rev. Plant Sci. 14, 4982 | ||
|
Summary: of the activity of the transporters and transcriptional regulation of gene expression. Structural analysis... suggests that calcium ions may regulate the func- tion of an Mn ATP-binding cassette (ABC)- permease... in Synechocystis 6803, a cyanobacterium, as well as in a number of other bacteria. The expression of genes encoding |
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|
Source: Pakrasi, Himadri - Department of Biology, Washington University in St. Louis |
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|
Collection: Biology and Medicine |
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