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Sample search results for: a549 cells proteomic

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1 Objective: To give a presentation of about 40-90 minutes at the end of the week covering the key aspects of proteomics.
 

Summary:  Genomics?" Cell 130,.395-8 Haoudi et al. (2007) Bioinformatics and data mining in proteomics Exp. Rev... Proteomics 10.5.09 Objective: To give a presentation of about 40-90 minutes at the end of the week... covering the key aspects of proteomics. The questions and contents below are meant as motivators and ...

  

Source: Goldschmidt, Christina - Department of Statistics, University of Warwick

 

Collection: Mathematics

 
2 Introduction With the completion of the Human Genome Project, attention
 

Summary:  to the characterisation of the proteome. Analysis of the proteome is commonly performed by separating the proteins using... identification hardware. In response to this a number of core proteomic service facilities have arisen... . The Functional Genomics and Proteomics Laboratories, housed in the School of ...

  

Source: Birmingham, University of - School of Psychology, Sensory Motor Neuroscience Centre

 

Collection: Biology and Medicine

 
3 2 PhD fellowships in the field of "protease proteomics" are being offered by the laboratory of Dr. Oliver Schilling,
 

Summary:  by proteolysis. The laboratory of Oliver Schilling combines cutting- edge proteomic technologies with cell... 2 PhD fellowships in the field of "protease proteomics" are being offered by the laboratory of Dr... . Oliver Schilling, Institute for Molecular Medicine & Cell Research, University of Freiburg, ...

  

Source: 

 

Collection: Physics ; Mathematics ; Biotechnology

 
4 Royal Institute of Technology AlbaNova University Center
 

Summary:  Cell Proteomics. 7(3):499-508 (3) Mathivanan et al (2008) Human Proteinpedia enables sharing of human... antibodies Mol Cell Proteomics 6(8):1455- 6. (5) Strömberg et al (2007) A high-throughput strategy... for protein profiling in cell microarrays using automated image analysis. ...

  

Source: Kjellström, Hedvig - School of Computer Science and Communication, Royal Institute of Technology (KTH)

 

Collection: Computer Technologies and Information Sciences

 
5 PhD POSITION IN DISEASE PROTEOMICS RESEARCH PROJECT
 

Summary:  purposes. Use of proteomics to analyze the surface proteomes of cells involved in human disease (breast... eucaryotic and/or bacterial cell cultures, in protein purification or in proteomics is a plus. - Good... PhD POSITION IN DISEASE PROTEOMICS RESEARCH PROJECT: A ...

  

Source: Foundation of Research and Technology, Hellas, Institute of Applied and Computational Mathematics, Regional Analysis Division

 

Collection: Engineering ; Computer Technologies and Information Sciences

 
6 RESEARCH ARTICLE Functional analysis of the nuclear proteome of human
 

Summary:  defined nuclear proteome data set in mammalian cells. 2 Materials and methods 2.1 Cell culture Human A549... RESEARCH ARTICLE Functional analysis of the nuclear proteome of human A549 alveolar epithelial... -like alveolar ...

  

Source: Wood, James B. - Bermuda Biological Station for Research

 

Collection: Environmental Sciences and Ecology

 
7 PUBLISHED in Proteomics,
 

Summary:  PUBLISHED in Mol. Cell. Proteomics, 2009 Elena Wiederhold, Liesbeth M. Veenhoff, Bert Poolman... and cell cycle stages are pre- sent. Thus organelle proteomics studies re- port `averaged' proteomes... in suffi- cient amounts (Table 2 and discussed be- low). For the ...

  

Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution,

 

Collection: Biology and Medicine ; Environmental Sciences and Ecology

 
8 Conclusions and future perspectives This thesis describes the development of novel methods for activity-based proteomics on
 

Summary:  ;Chapter 6 160 Figure 1: Western blot of cartridge-extraction of an A549 lysate (2.5x106 cells... chosen for proof of principle was the lung carcinoma cell line A549, and inhibitor FF was selected since... extraction of A549 ...

  

Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution,

 

Collection: Biology and Medicine ; Environmental Sciences and Ecology

 
9 Published in: Proteomics: Methods, Applications and Limitations (ed. G.C. Rancourt), (2010).
 

Summary:  , post-translational modifications, and quantitative changes in the cell are important. Proteomics can... of proteins. Since the cell is structured in organelles with different but interconnected functions, proteomic... the interpretation of proteomic results more difficult since those ...

  

Source: Ecole Polytechnique, Centre de mathématiques

 

Collection: Mathematics

 
10 Chemical proteomics on zinc-dependent metalloproteases
 

Summary:  at 200 nM. Preparation and labelling of lung carcinoma cellular proteomes Lung carcinoma cell line A549... experiments were performed in detergent-based total cell lysates of a human lung carcinoma cell line (A549... ...

  

Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution,

 

Collection: Biology and Medicine ; Environmental Sciences and Ecology

 
11 Novel cellular targets in human intrahepatic cholangiocarcinoma Identification of cellular targets in human intrahepatic
 

Summary:  -7Sep2010 Author manuscript, published in "Mol Cell Proteomics 2010;9(9):1991-2004" DOI : 10.1074/mcp... by CCA cells, as well as on the proteomic analysis of serum and bile (9, 10). Follow-up studies... cholangiocytes (present study) displayed striking similarities with those reported in ...

  

Source: Ecole Polytechnique, Centre de mathématiques

 

Collection: Mathematics

 
12 Introduction An adapted version of Chapter 1.2 has been published: Freije, J.R.; Bischoff, R. Drug Discov.
 

Summary:  proteomes. Interestingly, three non-MMP metallo-proteases were identified in invasive human melanoma cell... La, Prostate, Cyclin-dependent Cytosolic aldehyde Suggested ALDH-1 and GP- [61] A549 and kinases (CDKs... involved in pyrrolopyrimidine) stem cell neurogenesis Table 1.1: Examples ...

  

Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution,

 

Collection: Biology and Medicine ; Environmental Sciences and Ecology

 
13 The development and application of methods for activity-based protein profiling
 

Summary:  -rhodamine-labeled secreted proteome derived from invasive and non-invasive human melanoma cancer cells. Native... in the secreted and membrane pro- teomes of cancer cells, their soluble proteomes appeared quite similar, with few... of these biomolecules directly in cell, tissue, and ...

  

Source: Cravatt, Benjamin - Department of Cell Biology, Scripps Research Institute

 

Collection: Biology and Medicine

 
14 Protein Depletion for Plasma and Serum Proteomic Analysis
 

Summary:  separate sources. Mol. Cell. Proteomics 2004, 3:311-316. 16. Schaub S, Rush D, Wilkins J, Gibson IW, Weiler... - ment. Mol. Cell. Proteomics 2004, 3:327-344. 23. Nilsson S, Ramström M, Palmblad M, Axelsson O... , Fountoulakis M: The amniotic fluid cell proteome. ...

  

Source: Lebendiker, Mario - Wolfson Centre for Applied Structural Biology, Hebrew University of Jerusalem

 

Collection: Biotechnology ; Biology and Medicine

 
15 JOURNAL OF VIROLOGY, Sept. 2010, p. 95339545 Vol. 84, No. 18 0022-538X/10/$12.00 doi:10.1128/JVI.01005-10
 

Summary:  - clear proteome of A549 cells by quantitative 2-DE, identifying 24 differentially expressed proteins... the con- current depletion of cytoplasmic antioxidases. MATERIALS AND METHODS Cell culture. Human A549... in Hep2 cells ...

  

Source: Wood, James B. - Bermuda Biological Station for Research

 

Collection: Environmental Sciences and Ecology

 
16 OAK RIDGE NATIONAL LABORATORY U. S. DEPARTMENT OF ENERGY
 

Summary:  OAK RIDGE NATIONAL LABORATORY U. S. DEPARTMENT OF ENERGY Proteome of Rhodopseudomonas palustris... and nitrogen metabolism. · We characterized and compared the baseline proteome of a R. palustris wild... appeared only after anaerobic growth with no evidence in extracts of aerobically-grown cells. Proteins

  

Source: Oak Ridge National Laboratory Fossil Energy Program

 

Collection: Fossil Fuels

 
17 Journal List for Fall 2010 BMC Bioinformatics
 

Summary:  and Cellular Proteomics (MCP) PLoS Computational Biology Fuxiao: Nature Review Genetics Bioinformatics... and Bioinformatics Chao: Analytical Chemistry Proteomics Xin: Nature Data Mining and Knowledge Discovery... Jose: Cell Proteins: Structure, Function and Bioinformatics Genome Research Structure Sujun

  

Source: Radivojac, Predrag - School of Informatics, Indiana University

 

Collection: Computer Technologies and Information Sciences

 
18 Proteom -1-Das Proteom
 

Summary:  Curr Opin Cell Biol 2003 15, S. 199 Proteom -8- Umfassende Ansichten: "...omics" Genomics: Das Genom... Proteom -1- Das Proteom Vorlesung: Gene und Genome Wintersemester 2005 / 2006 Kristian Müller... Proteom -2- Ziele der Vorlesung · Interesse am Proteom wecken · ...

  

Source: Müller, Kristian - Institut für Biologie III, Albert-Ludwigs-Universität Freiburg

 

Collection: Biotechnology ; Biology and Medicine

 
19 Protein Biomarkers Service Submission Form Proteomics Core Laboratory
 

Summary:  Protein Biomarkers Service Submission Form Proteomics Core Laboratory The Biotechnology Program... ____ If no, frozen cell pellet frozen tissue frozen cell organelle prep; pellet size ___µl. In suspension... ______________________ Others ___________________________________________________________________________________ ...

  

Source: Cline, Kenneth C. - Horticultural Sciences Department, University of Florida

 

Collection: Biology and Medicine

 
20 Das Proteom Vorlesung: Gene und Genome
 

Summary:  of Biochemistry, 2nd edition © 2005 Thieme #12;Vom Gen zum Proteinkomplex Proteom -7-Curr Opin Cell Biol 2003 15... Modifikationen (PTM) Proteom -17- Nature Reviews Molecular Cell Biology, 2006, 7, 391- 403 · Nitrosylation... Das Proteom Vorlesung: Gene und Genome ...

  

Source: Müller, Kristian - Institut für Biologie III, Albert-Ludwigs-Universität Freiburg

 

Collection: Biotechnology ; Biology and Medicine


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21 Published in: Plant Proteomics: Technologies, Strategies, and Applications. (G.K. Agrawal & R Rakwal, eds.) John Wiley & Sons,
 

Summary:  will provide (i) an overview of plant cell wall proteomic studies, (ii) several strategies to analyze cell wall... bibliographic review: Despite the difficulties specific to CWP extraction and analysis, cell wall proteomics has... agents (20, 21). Cell wall ...

  

Source: Ecole Polytechnique, Centre de mathématiques

 

Collection: Mathematics

 
22 Targeted proteomics Pierre Lescuyer, Mireille Chevallet, Sylvie Luche, Thierry Rabilloud
 

Summary:  in proteomics is to restrict the analysis to selected subcellular components rather than to complete cells... by organelle proteomics, takes advantage of the existing compartimentalization of the eukaryotic cells... , M., Sanchez, J.C. and Hochstrasser, D.F. 2000. Proteomics meets ...

  

Source: Ecole Polytechnique, Centre de mathématiques

 

Collection: Mathematics

 
23 Annu. Rev. Genomics Hum. Genet. 2004. 5:26793 doi: 10.1146/annurev.genom.4.070802.110305
 

Summary:  of a proteome should specify that it is the protein complement of a given cell at a specified time, including... of receptor tyrosine kinase pathways in tumor cells (72); another used a human protein chip #12;PROTEOMICS 277... expressed in specific cell types and tissues would be useful ...

  

Source: Noriega, Fernando Gabriel - Department of Biological Sciences, Florida International University

 

Collection: Biology and Medicine

 
24 Guidelines for the next 10 years of proteomics Marc R. Wilkins1
 

Summary:  , J. N., Williamson, B. et al., Mol. Cell. Proteomics 2004, 3, 1154­1169. [12] Unlu, M., Morgan, M. E... . [22] Carr, S., Aebersold, R., Baldwin, M., Burlingame, A., Clauser, K. et al., Mol. Cell. Proteomics... Guidelines for the next 10 years of proteomics Marc R. Wilkins1 , Ron D. Appel2 ...

  

Source: Ecole Polytechnique, Centre de mathématiques

 

Collection: Mathematics

 
25 INTRODUCTION Galileo almost friendly: And why must it be
 

Summary:  - ple processes within the cell rather then a few specific "players". In (quantitative) proteomics each... ", such as metabol-ome (metabolites), lipid-ome (lipids), gen-ome (DNA), tran- script-ome (RNA) and prote-ome... (proteins). The study of proteomes extents beyond the question of expression (presence, ...

  

Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution,

 

Collection: Biology and Medicine ; Environmental Sciences and Ecology

 
26 Smart nanoblobs for targeted digestion of the cell Tanja Ninkovic Peter Lanigan Mark Neil Oscar Ces and David Klug
 

Summary:  and David Klug Single Cell Proteomics Group Tanja Ninkovic, Peter Lanigan, Mark Neil, Oscar Ces and David... Klug, email: peter.lanigan@imperial.ac.uk and t.ninkovic@imperial.ac.uk Single Cell Proteomics Group... Smart nanoblobs for targeted digestion of the cell Tanja Ninkovic Peter ...

  

Source: Rosso, Lula - Department of Chemistry, Imperial College, London

 

Collection: Chemistry ; Biology and Medicine

 
27 insight overview NATURE | VOL 422 | 13 MARCH 2003 | www.nature.com/nature 193
 

Summary:  proteomics, now evokes not only all the proteins in any given cell, but also the set of all protein isoforms... for an in-depth proteomics assault on specific cell types, formation of a consortium to generate antibodies... . Mol. Cell 10, 151­162 (2002). 23.Yoon, H. J. et al. ...

  

Source: Wilkinson, Gerald S. - Department of Biology, University of Maryland at College Park

 

Collection: Environmental Sciences and Ecology ; Biology and Medicine

 
28 PRIDE: The Proteomics Identifications database
 

Summary:  PRIDE: The Proteomics Identifications database www.ebi.ac.uk/pride High-throughput proteomics has... enabled the identification ­ and publication ­ of an ever-increasing number of proteins. The Proteomics... Identifications Database (PRIDE) has become one of the main repositories of proteomics data dervied ...

  

Source: Schnaufer, Achim - Institute of Immunology and Infection Research, University of Edinburgh

 

Collection: Biology and Medicine

 
29 Harvard School of Public Health Department of Genetics and Complex Diseases
 

Summary:  entitled "Comparative proteomic and transcriptomic profiling of the fission yeast Schizosaccharomyces pombe... in the fission yeast system (see for example: Zhou et al., Mol. Cell. 11:927-936, 2003; Geyer et al., Mol. Cell... 12:783-790, 2003; Zhou et al, BMC Biology 3:14, 2005; Wee et al., Nat. Cell Biol. ...

  

Source: Wolf, Dieter A.- Burnham Institute for Medical Research

 

Collection: Biology and Medicine

 
30 Please cite this article in press as: M.F. Khan, et al., Proteomics by mass spectrometry--Go big or go home? J. Pharm. Biomed. Anal. (2011), doi:10.1016/j.jpba.2011.02.012
 

Summary:  and organelle protein expression in mouse: combined proteomic and transcriptomic profiling, Cell 125 (2006) 173... prospects, Mol. Cell. Proteomics 1 (2002) 845­867. [23] N.L. Anderson, M. Polanski, R. Pieper, T. Gatlin, R... - teome: a nonredundant list developed by combination of four separate sources, ...

  

Source: Economou, Tassos - Institute of Molecular Biology and Biotechnology, Foundation of Research and Technology, Hellas

 

Collection: Biology and Medicine

 
31 Towards a new conceptual approach to `parasitoproteomics'
 

Summary:  that the proteome is the genome-operating system by which the cells of an organism react to environmental signals... biomaterials (e.g. body fluids and cell extracts) can be spotted. This proteomic tool, also known by its trade... proteome (cells or tissues) should ...

  

Source: Laboratoire de Génétique et Evolution des Maladies Infectieuses (GEMI), UMR CNRS-IRD 2724 UR 165

 

Collection: Biology and Medicine

 
32 Highly specific protein-protein interactions, evolution and negative design
 

Summary:  of the cell is called the proteome. So the mixture of N patches is only a partial proteome, but, the sake... in proteomes of simple model proteins. We are inspired by the work of Zarrinpar et al. [2003 Nature 426 676... the proteome of different organism is rather high, around one half. ...

  

Source: Isaac Newton Institute for Mathematical Sciences

 

Collection: Mathematics

 
33 Population proteomics: An emerging discipline to study metapopulation
 

Summary:  Population proteomics: An emerging discipline to study metapopulation ecology David G. Biron1... , Montpellier, France Proteomics research has developed until recently in a relative isolation from other fast... -moving disciplines such as ecology and evolution. This is unfortunate since applying proteomics to these disciplines

  

Source: Laboratoire de Génétique et Evolution des Maladies Infectieuses (GEMI), UMR CNRS-IRD 2724 UR 165

 

Collection: Biology and Medicine

 
34 Cellular Microbiology (2005) 7(8), 10611076 doi:10.1111/j.1462-5822.2005.00554.x 2005 Blackwell Publishing Ltd
 

Summary:  as the analysis of a complete set of proteins (proteome) of a given cell or organism. This field has primarily... comprehensive analyses of the cell membrane proteome of Pseudomonas aeruginosa to date, 786 cell membrane... -directed probes. Profiling of complex ...

  

Source: Bogyo, Matthew - Department of Microbiology and Immunology, Stanford University

 

Collection: Biology and Medicine

 
35 Chemistry & Biology, Vol. 10, 881892, September, 2003, 2003 Elsevier Science Ltd. All rights reserved. DOI 10.1016/j.chembiol.2003.08.009 Biological Mechanism Profiling Using an Annotated
 

Summary:  collection, 85 caused a 50% or more reduction in staining of A549 cells with the analysis [28]. We used our... ;Mechanism Profiling with Annotated Compounds 885 Figure 2. 85 ACL Compounds Inhibit A549 Cell Viability... and separates active compounds from all negative ...

  

Source: Stockwell, Brent R. - Department of Biological Sciences, Columbia University

 

Collection: Biology and Medicine

 
36 As the human genome project nears completion, biological research is entering a new era in which experimental focus will
 

Summary:  [5,6], the analysis of a cell's complete protein repertoire (proteome). Genomics has evolved rapidly... The Skaggs Institute for Chemical Biology and the Departments of Cell Biology* and Chemistry, The Scripps... that have never been charac- terised. Thus, a daunting task awaits contemporary biochemists and ...

  

Source: Cravatt, Benjamin - Department of Cell Biology, Scripps Research Institute

 

Collection: Biology and Medicine

 
37 Two-dimensional gel electrophoresis in proteomics: past, present and future Thierry Rabilloud1,2
 

Summary:  ), the first applications of what was to become proteomics took off, with applications to cell biology [4, 5... forms in a single cell [23]. In addition, important dimensions of our current proteomic knowledge root... , as exemplified on cell biology-oriented ...

  

Source: Ecole Polytechnique, Centre de mathématiques

 

Collection: Mathematics

 
38 Published in: Trends in Plant Science 11 : 33-39, January 2006. Cell wall proteins: a new insight through proteomics
 

Summary:  at the cell surface. The application of proteomic approaches to the cell wall compartment raises important... questions: Are there technical problems specific to cell wall proteomics? What kinds of proteins can... in this area [24-26], and the application of ...

  

Source: Ecole Polytechnique, Centre de mathématiques

 

Collection: Mathematics

 
39 Consejo Superior de Investigaciones CientConsejo Superior de Investigaciones Cientficasficas New Analytical Tools from Proteomics andNew Analytical Tools from Proteomics and LipidomicsLipidomics
 

Summary:  Analytical Tools from Proteomics andNew Analytical Tools from Proteomics and LipidomicsLipidomics Isabel... Concarneauvous de Concarneau 3030--3131 AugustAugust 20112011 #12;Proteomic,Proteomic, Lipidomic... a significant advance in the application of Proteomic todriven a significant advance in the ...

  

Source: López-Villavicencio, Manuela - Département Systématique et Évolution, Muséum National d'Histoire Naturelle

 

Collection: Biology and Medicine

 
40 Pioneers in Proteomics Mark Boguski, M.D., Ph.D.
 

Summary:  1 Pioneers in Proteomics Mark Boguski, M.D., Ph.D. Vice President and Global Head, Genome... and Proteome Sciences Novartis Institutes for BioMedical Research In part two of our Pioneers of Proteomics... series, Dr. Mark Boguski discusses the challenges of proteomics research, the changes needed to foster

  

Source: Boguski, Mark S. - Center for Biomedical Informatics, Harvard University

 

Collection: Mathematics ; Biology and Medicine


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41 Modern mass spec based (Because nucleic acids are overrated)
 

Summary:  Modern mass spec based proteomics (Because nucleic acids are overrated) #12;Presentation outline... What is "proteomics" ? Historical overview over development of the technology Applications... of proteomics Data processing and analysis Future perspectives #12;What is proteomics? Dictionary definition

  

Source: Goldschmidt, Christina - Department of Statistics, University of Warwick

 

Collection: Mathematics

 
42 Global analysis of predicted proteomes: Functional adaptation of physical properties
 

Summary:  between a cell and its environment. Each proteome was parti- tioned into membrane and nonmembrane... Global analysis of predicted proteomes: Functional adaptation of physical properties Christopher G... the complete predicted proteomes of >100 organisms spanning the three domains of life to investigate

  

Source: Kassen, Rees - Department of Biology, University of Ottawa

 

Collection: Biology and Medicine ; Environmental Sciences and Ecology

 
43 Selectively Enrich for Mitochondrial and Cytosolic Proteomes
 

Summary:  Kit (Cat. No. QIA88) is designed for extraction of cellular proteomes from mammalian cells. The simple... Selectively Enrich for Mitochondrial and Cytosolic Proteomes The Cytosol/Mitochondria Fractionation... associated relocalization of cytochrome C from mitochondria to the cytoplasm. 107 Jurkat cells were ...

  

Source: Lebendiker, Mario - Wolfson Centre for Applied Structural Biology, Hebrew University of Jerusalem

 

Collection: Biotechnology ; Biology and Medicine

 
44 Published in: Advances in Genetics Research (2010)
 

Summary:  . Hauppauge, NY, USA Plant cell wall functional genomics: Novelties from proteomics Rafael Pont... ) chapter 10" #12;2 ABSTRACT Proteomics has become an important contributor to the knowledge of plant cell... . This chapter will give an overview on recent development in the cell wall ...

  

Source: Ecole Polytechnique, Centre de mathématiques

 

Collection: Mathematics

 
45 Meets in GBSF 6202 from 1:00-3:00pm on Thursdays INTENSIVE SUMMER INSTITUTE HOT TOPICS 2007
 

Summary:  and Stem Cell Therapy Jan Nolta Stem cells Kathy Ferrara A Biomedical Engineering Approach to Organ... Targeting Jeff Southard Clinical Application and Impact of Gene and Stem Cell Therapy 8/23 Genetics, SNPs... of SNPs and HAPs in Disease Uma Srivatsa Genetics of Heart Failure 8/30 Proteomics and Protein

  

Source: Wainwright, Peter C. - Section of Evolution and Ecology, University of California, Davis

 

Collection: Environmental Sciences and Ecology

 
46 Journal of Biological Systems, Vol. 10, No. 4 (2002) 381407 c World Scientific Publishing Company
 

Summary:  ANALYSIS OF THE EVOLVING PROTEOMES: PREDICTIONS OF THE NUMBER OF PROTEIN DOMAINS IN NATURE AND THE NUMBER... and protein domains in a proteome, and the number of protein domains in nature is a daunting challenge... of the number of occurrences of protein domains in sample proteomes of the 70 fully sequenced genome organisms

  

Source: Pickalov, Valery - Computerized Tomography Group, Institute of Theoretical and Applied Mechanics

 

Collection: Biology and Medicine ; Engineering

 
47 CURRICULUM VITAE REBEKAH L. GUNDRY FEBRUARY 2011
 

Summary:  , Raginski K, Boheler KR, Van Eyk JE, "Expanding the mouse embryonic stem cell proteome: combining three... , Wollscheid B, "A Novel Role for Proteomics in the Discovery of Cell Surface Markers on Stem Cells: Scratching... § , Burrdige PW, Boheler, KR, "Heterogeneity in Pluripotent Stem ...

  

Source: Medical College of Wisconsin, Biotechnology and Bioengineering Center, Computational Bioengineering Group

 

Collection: Biology and Medicine

 
48 Chemical Strategies for Functional Proteomics* Gregory C. Adam, Erik J. Sorensen, and Benjamin F. Cravatt
 

Summary:  of proteins in cell and tissue proteomes. Additionally, we discuss the emerging field of activity... order cellular properties. In this study, cancer cell proteomes were split into three fractions prior... applied to tissue and cell line proteomes in a screen for ...

  

Source: Cravatt, Benjamin - Department of Cell Biology, Scripps Research Institute

 

Collection: Biology and Medicine

 
49 Characterization of the Mouse Brain Proteome Using Global Proteomic Analysis Complemented with Cysteinyl-Peptide
 

Summary:  , Wisniewski JR. Proteomic mapping of brain plasma membrane proteins. Mol Cell Proteomics 2005;4:402­408. [Pub... " of Neuromelanin Granules Isolated from the Human Brain. Mol Cell Proteomics 2005;4:945­957. [PubMed: 15851778... , Issaq HJ, Veenstra TD. Global analysis of the cortical ...

  

Source: Smith, Desmond J. - Department of Molecular and Medical Pharmacology, University of California at Los Angeles

 

Collection: Biology and Medicine

 
50 Does the proteome encode organellar pH? Christopher L. Bretta,b,1
 

Summary:  Hypothesis Does the proteome encode organellar pH? Christopher L. Bretta,b,1 , Mark Donowitza... to the proteome itself, may be information that enables proteins to buffer pH at a level that promotes their own... by Elsevier B.V. All rights reserved. Keywords: pI; pH; Proteome; Yeast; Subcellular compartment; Evolution 1

  

Source: Rao, Rajini - Department of Physiology, Johns Hopkins University

 

Collection: Biology and Medicine

 
51 Analysis of genomic and proteomic DEA BIOINFO
 

Summary:  Analysis of genomic and proteomic data DEA BIOINFO Gianluca Bontempi Département d... 'Informatique Boulevard de Triomphe - CP 212 http://www.ulb.ac.be/di Analysis of genomic and proteomic data ­ p.1/40 #12... microarray. · Notions of R programming. Analysis of genomic and proteomic data ­ p.2/40 #12;Course outline

  

Source: Bontempi, Gianluca - Département d'Informatique, Université Libre de Bruxelles

 

Collection: Computer Technologies and Information Sciences

 
52 The Asia Oceania Human Proteome Organisation Membrane Proteomics Initiative. Preparation and characterization of the carbonate-washed
 

Summary:  large scale proteomic investigation strategy for mammals. Mol. Cell. Proteomics 2003, 2, 96-106. [4... ., Human liver proteome project: plan, progress, and perspectives. Mol. Cell. Proteomics 2005, 4, 1841... proteomics. Mol. ...

  

Source: Chait, Brian T. - Laboratory of Mass Spectrometry and Gaseous Ion Chemistry, Rockefeller University

 

Collection: Biology and Medicine

 
53 MED263: Bioinformatic Applications to Human Disease W. Andy Tao, University of Purdue
 

Summary:  PROTEOMICS MED263: Bioinformatic Applications to Human Disease W. Andy Tao, University of Purdue... #12;What you will learn. 3 Arms of Proteomics Resources for visualizing protein structure Methods... Coccidioides resistance protein network. #12;Suggested Reading 1. Pevsner, J, Protein Analysis and Proteomics

  

Source: Gleeson, Joseph G. - Department of Neurosciences, University of California at San Diego

 

Collection: Biology and Medicine

 
54 Enzyme activity profiles of the secreted and membrane proteome that depict cancer
 

Summary:  Enzyme activity profiles of the secreted and membrane proteome that depict cancer cell invasiveness... . Materials and Methods Preparation of Human Cancer Cell Line Proteomes. All cell lines, with the exception... for the relative quantity of soluble secreted membrane protein isolated for ...

  

Source: Cravatt, Benjamin - Department of Cell Biology, Scripps Research Institute

 

Collection: Biology and Medicine

 
55 Microarray Platform for Profiling Enzyme Activities in Complex Proteomes Stephan A. Sieber, Tony S. Mondala, Steven R. Head, and Benjamin F. Cravatt*
 

Summary:  proteomes from the human breast cancer cell lines MDA-MB-231 and 231mfp were analyzed.15 The 231mfp line... .; Medzihradsky, K. F.; Bogyo M. Mol. Cell. Proteomics 2002, 1, 60-68. (12) Winssinger, N.; Ficarro, S.; Schultz... Microarray Platform for Profiling Enzyme Activities in Complex ...

  

Source: Cravatt, Benjamin - Department of Cell Biology, Scripps Research Institute

 

Collection: Biology and Medicine

 
56 PROTEOME COMPLEXITY MEASURES BASED ON COUNTING OF DOMAIN-TO-PROTEIN
 

Summary:  PROTEOME COMPLEXITY MEASURES BASED ON COUNTING OF DOMAIN-TO-PROTEIN LINKS FOR REPLICATIVE AND NON... , CB10 1SD, UK * Corresponding author Abstract: The entire protein domain set of the proteome... of their occurrences (links to proteins) found in the proteome to be the domain-to-protein linkage profile (DPLP). We

  

Source: Pickalov, Valery - Computerized Tomography Group, Institute of Theoretical and Applied Mechanics

 

Collection: Biology and Medicine ; Engineering

 
57 The Rockefeller University Press $30.00 J. Cell Biol. Vol. 190 No. 4 491500
 

Summary:  it into a staple meth- odology for cell biologists. Mass spectrometry­based proteomics in cell biology Tobias C... August 23, 2010 #12;493Proteomics in cell biology · Walther and Mann needs to detect proteins in complex... control proteome and the two can be ...

  

Source: Noriega, Fernando Gabriel - Department of Biological Sciences, Florida International University

 

Collection: Biology and Medicine

 
58 VIII. CHAPTER The philosopher: Your Highness, ladies
 

Summary:  /tissues. For subcellular proteomics, cells are broken and the desired subcellular pro- teome (e.g. an organelle... anything. #12;#12;VIII. CHAPTER: Discussion Mass spectrometry-based proteomics is a widely used technology... in Chapters III and VI two different applica- tions of quantitative proteomics. In ...

  

Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution,

 

Collection: Biology and Medicine ; Environmental Sciences and Ecology

 
59 2D gel electrophoresis is the technology that everyone loves to hate --it requires manual dexterity and precision to reproduce
 

Summary:  , proteome analysis should characterise and quantitate all the proteins in a cell or biopsy at a par- ticular... and external). Thus, the proteome brings us much closer to the living processes of the cell -- but this makes... proteome. Thus, rat hepatic stellate cells ...

  

Source: Skop, Ahna - Department of Medical Genetics, University of Wisconsin at Madison

 

Collection: Biology and Medicine

 
60 With the mapping of the human genome complete, the focus in the world of bioinformatics has turned to proteomics, a discipline that
 

Summary:  to proteomics, a discipline that involves unravelling the structure and function of proteins. In 2001... -class proteomics centre dedicated to mapping the human proteome with the ultimate goal of understanding human... . Don Rix Protein Identification Facility has established Western as a leading proteomics ...

  

Source: Ma, Bin - Departments of Computer Science & Biochemistry, University of Western Ontario

 

Collection: Biotechnology ; Computer Technologies and Information Sciences


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61 2011;71:473-483. Published OnlineFirst January 11, 2011.Cancer Res Jia-Yang Chen, Yen-An Tang, Sin-Ming Huang, et al.
 

Summary:  -2,3-sialylation on cell surface. AL10 suppresses lung metastasis of A549 in tail... lung cancer cell lines, H1299 and A549, were obtained from the American Type Culture Collection... the ST3Gal I protein level by 20% to 25% in H1299, CL1-5, and ...

  

Source: Gleeson, Joseph G. - Department of Neurosciences, University of California at San Diego

 

Collection: Biology and Medicine

 
62 How shall we use the proteomics toolbox for biomarker discovery? Pierre Lescuyer 1,2
 

Summary:  to the protohistory of proteomics 25 . The comparison between differently diseased versions of the same tissue or cell... that the technical progresses in proteomics will give us access to disease-typing proteins in cells well before... with a strictly mass spectrometry-based approach for data analysis. Mol ...

  

Source: Ecole Polytechnique, Centre de mathématiques

 

Collection: Mathematics

 
63 Supplementary Information A novel sialyltransferase inhibitor suppresses FAK/paxillin and
 

Summary:  3x104 of the CL1-0, CL1-5, A549, and H1299 lung cancer cells were seeded on 12-well culture dishes... knockdown or ectopic expression of ST3Gal I or ST6Gal I for 48 hr. A549 cells (2x105 ) were then seeded onto... treatment with Lith-O-Asp, the survival of CL1-0, ...

  

Source: Gleeson, Joseph G. - Department of Neurosciences, University of California at San Diego

 

Collection: Biology and Medicine

 
64 Urine in clinical proteomics Stphane Decramer1, 2, 3
 

Summary:  ,version1-12Feb2009 Author manuscript, published in "Mol Cell Proteomics 7, 10 (2008) 1850-62" DOI : 10... : Cancer. 3.2.1. Renal cell carcinoma One of the first applications of urinary proteome analysis... 1 Urine in clinical proteomics Stéphane Decramer1, 2, 3 , Anne Gonzalez de Peredo4 ...

  

Source: Ecole Polytechnique, Centre de mathématiques

 

Collection: Mathematics

 
65 Proteome-Wide Peptide Libraries to Determine Protease Selectivity (CLIP-PICS)
 

Summary:  sites for the proteases in question. · The natural proteome could consist of, but is not limited to cell... conditioned medium, cells lysates, tissue extracts and body fluids etc. · The natural proteome is fragmented... Proteome-Wide Peptide Libraries to Determine Protease Selectivity ...

  

Source: Michelson, David G. - Department of Electrical and Computer Engineering, University of British Columbia

 

Collection: Engineering

 
66 Program Director/Principal Investigator (Last, First, Middle): Olivier, Michael, Ph.D. and Smith, Lloyd M., Ph.D. PHS 398/2590 (Rev. 11/07) Page Continuation Format Page77
 

Summary:  proteomic profiling of the secretome of rat vascular endothelial cells. J. Proteom. Res. 5(10): 2861. 12. S... quantitative comparison of the cellular proteomes of endothelial cells from consomic rat strains under normoxia... ) Quantitative proteomic profiling of ...

  

Source: Medical College of Wisconsin, Biotechnology and Bioengineering Center, Computational Bioengineering Group

 

Collection: Biology and Medicine

 
67 Vol. 38, No. 2 (2005) BioTechniques 1 Introduction
 

Summary:  genome. The field of proteomics is now challenged with the task of elucidating the cellular func- tions... of these proteins in both normal and pathological pro- cesses (1­3). Several proteomic techniques, such as 2... of regulation of enzyme activity. This new area has been given the name chemical proteomics, or activity

  

Source: Bogyo, Matthew - Department of Microbiology and Immunology, Stanford University

 

Collection: Biology and Medicine

 
68 Membrane proteins and proteomics: love is possible, but so difficult. Thierry Rabilloud 1,2
 

Summary:  of membrane and cell wall associated proteins from Staphylococcus aureus. J Proteome Res. 2005, 4, 250... -257. [39] Gatlin, C.L., Pieper, R., Huang, S.T., Mongodin, E. et al., Proteomic profiling of cell envelope... mutant. Mol Cell Proteomics. 2008 7, 473-485 [43] ...

  

Source: Ecole Polytechnique, Centre de mathématiques

 

Collection: Mathematics

 
69 Integrating Cytomics and Proteomics* Tytus Bernas, Ge rald Gre gori, Eli K. Asem, and J. Paul Robinson
 

Summary:  cell analysis and separation tools are integrated into the proteomic programs within a core laboratory... is the study of the role of the cell within the context of genomic and proteomic discoveries. It is defined... force for integrating cytomics into proteomics is the need to generate ...

  

Source: Robinson, J. Paul - Weldon School of Biomedical Engineering, Purdue University

 

Collection: Biology and Medicine ; Engineering

 
70 Proteomics of Burkholderia species using mass spectrometry
 

Summary:  were the most abundant proteins identified in the whole cell proteome. Then proteins were extracted... Proteomics of Burkholderia species using mass spectrometry This project is being done... beneficial organism for the environment and for the plants. Very few proteomics studies have been carried out

  

Source: Wysocki, Vicki H. - Department of Chemistry and Biochemistry, University of Arizona

 

Collection: Chemistry

 
71 0076G/CBE (Cell Biology Education) 03-06-0028 03-06-0028.xml November 6, 2003 16:33 Cell Biology Education
 

Summary:  0076G/CBE (Cell Biology Education) 03-06-0028 03-06-0028.xml November 6, 2003 16:33 Cell Biology... Genomics, Proteomics, and Bioinformatics, by A. Malcolm Campbell and Laurie Heyer; 2003; 352 pp., Benjamin... to think outside of the box to freely traverse between the single molecule and the ge- ...

  

Source: Samudrala, Ram - Department of Microbiology, University of Washington at Seattle

 

Collection: Biotechnology ; Biology and Medicine

 
72 BioMed Central Page 1 of 8
 

Summary:  Cell Proteomics 2004, 3(6):531-533. Snapshot of the peptide query searchFigure 6 Snapshot... of four separate sources. Mol Cell Proteomics 2004, 3(4):311-326. 11. Kersey PJ, Duarte J, Williams A... Cell Proteomics 2004, 3(6):608-614. 14. Statistical Analysis of ...

  

Source: Radivojac, Predrag - School of Informatics, Indiana University

 

Collection: Computer Technologies and Information Sciences

 
73 Mee-Jung Han1 Sang Yup Lee1, 2
 

Summary:  and Technology, Daejeon, Korea Proteome profiling and its use in metabolic and cellular engineering Proteome... spectrometry allow the creation of global scale proteome con- tents which can be used to elucidate valuable... the physiolog- ical changes. In this paper, we review the approaches of exploiting the ...

  

Source: Korea Advanced Institute of Science and Technology, Department of Chemical and Biomolecular Engineering, Metabolic & Biomolecular Engineering National Research Laboratory

 

Collection: Engineering ; Biotechnology

 
74 May 29 (Thursday)-31 (Saturday), 2008 Ramada Plaza Jeju Hotel, Jeju, Korea
 

Summary:  Syndrome and Cardiovascular Disease, Stem Cells Proteomics, Proteomics in Infectious Disease, Proteome... University, Korea Parallel Session B (HALL-B) Symposium 6 Stem Cells Proteomics Chair & Organizer: Dong... -Wook Kim, Yonsei University, Korea 11:20-11:40 ...

  

Source: Kim, Hak-Sung - Department of Biological Sciences, Korea Advanced Institute of Science and Technology

 

Collection: Biology and Medicine

 
75 COCHBI-409; NO OF PAGES 9 Tagging and detection strategies for activity-based proteomics
 

Summary:  limitations to the use of biotin as a tag for activity-based proteomics. First, biotin has low cell... to expression proteomics. Mol Cell Proteomics 2002, 1:376-386. 17. Kirkpatrick DS, Gerber SA, Gygi SP... . Mol Cell Proteomics 2005, ...

  

Source: Bogyo, Matthew - Department of Microbiology and Immunology, Stanford University

 

Collection: Biology and Medicine

 
76 07/07/2008, 17:07:49 The oxidative stress response: a proteomic view
 

Summary:  stress. However, most of the proteomics studies on the oxidative stress response of mammalian cells deal... assignment of the modification sites has not been carried out in these studies. 3. Cell biology proteomics... is much higher than in prokaryots. This means in turn that our ...

  

Source: Ecole Polytechnique, Centre de mathématiques

 

Collection: Mathematics

 
77 Project 3 Integrative Genomics (IG) Objective: To give a presentation of about 40-90 minutes duration at the end of the week covering the
 

Summary:  on Disease" Nature 452.423- 30. Proteomics: Cox and Mann, (2007) "Is Proteomics the New Genomics?" Cell 130... on epigenomics, transcriptomics, proteomics, metabonomics and phenomics? Population variation is excluded, since... ://www.stats.ox.ac.uk/research/genome/publications Epigenomics: Meissner et al. ...

  

Source: Goldschmidt, Christina - Department of Statistics, University of Warwick

 

Collection: Mathematics

 
78 Analysis and validation of proteomic data generated by tandem mass spectrometry
 

Summary:  . The need for guidelines in publication of peptide and protein identification data. Mol. Cell. Proteomics 3... Analysis and validation of proteomic data generated by tandem mass spectrometry Alexey I... spectrometry­based proteomics experiments represents a significant challenge and is currently a bottleneck

  

Source: Kihara, Daisuke - Department of Biological Sciences, Purdue University

 

Collection: Biology and Medicine ; Biotechnology

 
79 JERREME J. JACKSON, B.S 5000 Western Avenue, Apt. 1706
 

Summary:  /2005-7/2008 Laboratory Technician, Nutrition Technology Proteomic analysis of canine and feline samples from in vitro... ingredient screens, pathogenic studies and biological samples Generate proteomic data from dietary... spectrometry, High-Pressure Liquid Chromatography, ELISA Pharmacology In vitro cell culture drug metabolism

  

Source: Jurat-Fuentes, Juan Luis - Department of Entomology and Plant Pathology, University of Tennessee

 

Collection: Biology and Medicine

 
80 The Application of Proteomic Techniques to Fungal Protein
 

Summary:  the applicability of proteomics to vaccine development.39 In this study, an extract of yeast cell wall proteins... at the University of Arizona to analyze the spherule cell wall proteome, and to comprehensively an- alyze... by amino acids in cell culture, SILAC, as a simple and accurate ...

  

Source: Wysocki, Vicki H. - Department of Chemistry and Biochemistry, University of Arizona

 

Collection: Chemistry


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81 Analytical platforms for activity-based protein profiling exploiting the versatility of chemistry for functional proteomics
 

Summary:  proteins in cells and tissues. The most mature method for proteome analysis is two- dimensional... in cells and tissues might serve as effective functional proteomic tools.18,19,23 These activity- based... to be highly versatile proteomic tools, capable of profiling any fraction of ...

  

Source: Cravatt, Benjamin - Department of Cell Biology, Scripps Research Institute

 

Collection: Biology and Medicine

 
82 insight review articles 198 NATURE | VOL 422 | 13 MARCH 2003 | www.nature.com/nature
 

Summary:  technical disciplines, all of which contribute to proteomics. These include cell imaging by light... expressed in a cell, an explicit goal of proteomics, is now also rapidly advancing, due mainly... to systematically analyse the proteins expressed by a cell or tissue, that is, to ...

  

Source: Skop, Ahna - Department of Medical Genetics, University of Wisconsin at Madison; Wilkinson, Gerald S. - Department of Biology, University of Maryland at College Park

 

Collection: Biology and Medicine ; Environmental Sciences and Ecology

 
83 Proteomic profiling of metalloprotease activities with cocktails of active-site probes
 

Summary:  metalloprotease selectivity pro- files. These probes can be administered to cell and tissue proteomes... by gel-based ABPP as follows. Individual probes were added to cell and tissue proteomes and the reactions... of human cancer cell lines that differ in key pathogenic traits. ...

  

Source: Cravatt, Benjamin - Department of Cell Biology, Scripps Research Institute

 

Collection: Biology and Medicine

 
84 Sperm Chromatin FERTILE GROUNDS FOR PROTEOMIC DISCOVERY OF CLINICAL TOOLS*
 

Summary:  . Molecular & Cellular Proteomics 7:1876­1886, 2008. Sperm are intricate yet streamlined cells... are particularly well suited to proteomic approaches. Compared with most other cell types, they are easily isolated... cell. Estimates of sperm proteome size have ...

  

Source: Skop, Ahna - Department of Medical Genetics, University of Wisconsin at Madison

 

Collection: Biology and Medicine

 
85 An application of latent topic document analysis to large-scale proteomics databases
 

Summary:  inference problem. Mol Cell Proteomics, 4:1419­1440, 2005. 19. G. S. Omenn, D. J. States, M. Adamski, and T... An application of latent topic document analysis to large-scale proteomics databases Sebastian Klie... .martens,juan,rcote,pjones,apweiler,hhe}@ebi.ac.uk Abstract. Since the advent of public data repositories for ...

  

Source: Hinneburg, Alexander - Fachbereich Mathematik und Informatik, Martin-Luther-Universität Halle-Wittenberg

 

Collection: Computer Technologies and Information Sciences

 
86 Proteomes and Proteins A Course Jointly Organized by
 

Summary:  , July 9-22, 2006 The proteome is the specific protein complement of each cell. Proteomics, the analysis... Proteomes and Proteins A Course Jointly Organized by The International School of Advanced Bio... of proteomes' structure and functional organization including protein ...

  

Source: Pascucci, Valerio - School of Computing, University of Utah

 

Collection: Computer Technologies and Information Sciences

 
87 Fifth International of the Austrian
 

Summary:  Fifth International Symposium of the Austrian Proteomics Platform January 20 - 23, 2008 Seefeld... to proteomics, metabolomics and bioinformatics from young Austrian and international investigators. Due... / postdocs: 200 Euro free Other participants: 400 Euro free Further information and registration http://www.proteomics

  

Source: Hirt, Heribert - Department of Genetics, Universität Wien

 

Collection: Biology and Medicine

 
88 Modeling Experimental Design for Proteomics Jan Eriksson and David Feny
 

Summary:  , Mol Cell Proteomics, 1, 845­67. 3. R. Aebersold and M. Mann (2003) Mass spectrometry-based proteomics... -dimensional quantitative analysis system for proteome profiling of biological fluids, Mol Cell Proteomics, 4, 618­25. 5. Y... Cell ...

  

Source: Chait, Brian T. - Laboratory of Mass Spectrometry and Gaseous Ion Chemistry, Rockefeller University

 

Collection: Biology and Medicine

 
89 Chemistry & Biology, Vol. 11, 15231531, November, 2004, 2004 Elsevier Ltd. All rights reserved. DOI 10.1016/j.chembiol.2004.08.023 Discovering Disease-Associated Enzymes
 

Summary:  activities from complex proteomes. Mol. biochemistry of type 2 diabetes. Chem. Rev. 104, 1255­1282. Cell... the proteome. Mol. Cell. Proteomics 1, 60­68. 27. Shoolingin-Jordan, P.M., Spencer, P., Sarwar, M., Erskine, P... . DOI 10.1016/j.chembiol.2004.08.023 Discovering ...

  

Source: Cravatt, Benjamin - Department of Cell Biology, Scripps Research Institute

 

Collection: Biology and Medicine

 
90 Chemistry & Biology, Vol. 11, 535546, April, 2004, 2004 Elsevier Science Ltd. All rights reserved. DOI 10.1016/j.chembiol.2004.03.012 Profiling Enzyme Activities In Vivo
 

Summary:  further validated by the recent report by Ovaa et al. observed in either cell or tissue proteomes (Figure... ) or cell (human MDA-MB-435 cancer cell line) proteomes was incubated with probe (5 M) for 1 hr... and rhodamine functional groups) are utilized to affinityPreparation of ...

  

Source: Cravatt, Benjamin - Department of Cell Biology, Scripps Research Institute

 

Collection: Biology and Medicine

 
91 DOI: 10.1126/science.1142033 , 1402 (2007);318Science
 

Summary:  be expressed in living cells and allow live-cell imaging of endogenous proteins (6). Proteomics. An important... of proteomics has not yet reached the point where measurements can be performed at the single-cell level... cells. Nucleoli have also been used to develop ...

  

Source: Trinkle-Mulcahy, Laura - Department of Cellular and Molecular Medicine, University of Ottawa

 

Collection: Biology and Medicine

 
92 8/8/11 8:58 AMMicroproteomics: Quantitative Proteomic Profiling of Small Numbers of L... Roulhac et al. 2011 (2): pdb.prot5573 --Cold Spring Harbor Protocols Page 1 of 11http://cshprotocols.cshlp.org/cgi/content/full/2011/2/pdb.prot5573?print=true
 

Summary:  Protocol Microproteomics: Quantitative Proteomic Profiling of Small Numbers of Laser-Captured Cells Petra L... . Unlike the genome, which is similar throughout all cells in a given organism, the proteome varies... differences between different cell populations (see Fig. 5, Fig.6 ). Unlike ...

  

Source: Jarvis, Erich D. - Department of Neurobiology, Duke University

 

Collection: Biology and Medicine

 
93 Guidelines for reporting the use of gel electrophoresis in proteomics Frank Gibson1
 

Summary:  Guidelines for reporting the use of gel electrophoresis in proteomics Frank Gibson1 , Leigh... 28 & Andrew R Jones29 1. Institute for Cell and Molecular Biosciences, The Medical School, University... of Newcastle, Newcastle upon Tyne, UK. 2. Plasma Proteome Institute, PO Box 21466, Washington, DC 20009

  

Source: Ecole Polytechnique, Centre de mathématiques

 

Collection: Mathematics

 
94 Universal sample preparation method for
 

Summary:  . In comparison, comparable in-depth measurement of the embryonic stem cell proteome took more than three weeks... -based proteomic analysis. (a) Cell or tissue lysates can be prepared in the presence of high concentrations... Endosome ER Cytosol Cytoskeleton Cytoplasm Chromosome Cell ...

  

Source: Lebendiker, Mario - Wolfson Centre for Applied Structural Biology, Hebrew University of Jerusalem

 

Collection: Biotechnology ; Biology and Medicine

 
95 Chemical Labeling for the Analysis of Proteins, Peptides and Metabolites
 

Summary:  H ______________________ 68 2.4 Labeling of amino acids and glutathione in cultured A549 cells undergoing cigarette... __________________________ 76 3.4 Quantification of intracellular amino acids and glutathione in A549 cells undergoing cigarette... : Selectivity, ...

  

Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution,

 

Collection: Biology and Medicine ; Environmental Sciences and Ecology

 
96 Cellular Proteomes Have Broad Distributions of Protein Stability Kingshuk Ghosh
 

Summary:  a significant fraction of a cell's proteome. The smallest proteins are the least stable, on average. Perhaps... , protein aggregation, and metabolism--may affect how cell proteomes respond to temperature... an equation for computing the distribution of stabil- ities of the proteins in a ...

  

Source: Dill, Ken A. - Department of Pharmaceutical Chemistry, University of California at San Francisco

 

Collection: Biotechnology ; Biology and Medicine

 
97 Annu. Rev. Biomed. Eng. 2002. 4:34973 doi: 10.1146/annurev.bioeng.4.020702.153443
 

Summary:  the entire proteome. Approximately 5,000­10,000 genes are expressed in a cell at any given time, which could... . Such a comprehensive database of cellular proteins could serve as a tool for studying the proteomic re- sponse of cells... expression in cells and tissues under different ...

  

Source: Noriega, Fernando Gabriel - Department of Biological Sciences, Florida International University

 

Collection: Biology and Medicine

 
98 Fully denaturing two-dimensional electrophoresis of membrane proteins: a critical update. Thierry Rabilloud 1,2, Mireille Chevallet 1,2, Sylvie Luche 1,2, Ccile Lelong 1,2
 

Summary:  .P., Marten, M.R., Ross, J.M., Proteome analysis of membrane and cell wall associated proteins from... . et al., Proteomic profiling of cell envelope-associated proteins from Staphylococcus aureus... vesicles from the extraintestinal pathogenic Escherichia coli tolR IHE3034 mutant. Mol ...

  

Source: Ecole Polytechnique, Centre de mathématiques

 

Collection: Mathematics

 
99 List of Publications Abello, N.; Barroso, B., Kerstjens, H. A.; Postma, D. S.; Bischoff, R., Chemical
 

Summary:  acylation of primary amines in peptides and proteins. J Proteome Res 2007, 6, (12), 4770-6.2 Barroso, B... and biological consequences, denitration and proteomics methods for the identification of tyrosine... -nitrated proteins. Submitted. 1 Publication highlighted in the online section news of Journal of Proteome Research L

  

Source: Groningen, Rijksuniversiteit - Centre for Ecological and Evolutionary Studies, Department of Marine Benthic Ecology and Evolution,

 

Collection: Biology and Medicine ; Environmental Sciences and Ecology

 
100 Nucleic Acids Research doi:10.1093/nar/gki514
 

Summary:  and apoptosis in the human A549 tumour cell line. We show here that 12459 induces a delayed apoptosis... that activates the mitochondrial pathway. A549 cell lines selected for resistance to 12459 and previously... adenocarcinoma ...

  

Source: Ecole Polytechnique, Centre de mathématiques

 

Collection: Mathematics


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