| Sample search results for: a5 gene expression |
| 1 | Genome-wide analysis of developmental and sex-regulated gene expression profiles in | ||
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Summary: complex genes. The two E2F genes (F49E12.6 and Y102A5C.18) show different expression profiles than... Genome-wide analysis of developmental and sex-regulated gene expression profiles in Caenorhabditis... be used as a tool to define a nearly ... |
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Source: Kim, Stuart - Department of Developmental Biology, Stanford University |
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Collection: Biology and Medicine |
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| 2 | How To Filter Genes September 26, 2008 | ||
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Summary: the filtering function to the expression matrix. > f1 <- kOverA(5, 200) > ffun <- filterfun(f1) > which... genes that are expressed in more than 5 samples then that is an example of a nonspecific filter. First... let's see how to perform a nonspecific filter. Suppose ... |
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Source: Bain, Mike - School of Computer Science and Engineering, University of New South Wales |
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Collection: Computer Technologies and Information Sciences |
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| 3 | How To Filter Genes October 16, 2005 | ||
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Summary: to the expression matrix. > f1 <- kOverA(5, 200) > ffun <- filterfun(f1) > which <- genefilter(exprs(eset), ffun... to some particular variable. For example if we want to select genes that are differentially expressed... to perform a nonspecific filter. Suppose we ... |
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Source: Bain, Mike - School of Computer Science and Engineering, University of New South Wales |
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Collection: Computer Technologies and Information Sciences |
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| 4 | Identification of a nematode chemosensory gene family | ||
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Summary: genes (C36C5.6, T20D4.1, T20D4.2, T20D4.18, and T11A5.4) and two C. briggsae genes (CBG21860 and CBG... the microarray-based gene expression clusters described by Kim et al. (20) to examine whether the sra-like genes... were temporally ... |
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Source: Baillie, David - Department of Molecular Biology and Biochemistry, Simon Fraser University |
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Collection: Biology and Medicine |
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| 5 | Evolution of Sarcomeric Myosin Heavy Chain Genes: Evidence from Fish Katrina McGuigan,* Patrick C. Phillips, and John H. Postlethwait* | ||
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Summary: . Instead, we focused on one D. rerio clone (AL954717) with five MYH genes (Dre A1 to Dre A5: table 2). We... (table 2; fig. 2b). Fish cardiac genes are missing Introns 18 and 36 and Dre A5 is also missing Intron 20... (no mismatches allowed) for 19 fragments, which ... |
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Source: Phillips, Patrick - enter for Ecology and Evolutionary Biology & Department of Biology, University of Oregon |
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Collection: Environmental Sciences and Ecology ; Biology and Medicine |
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| 6 | BioMed Central Page 1 of 15 | ||
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Summary: Proceedings Analysis of multiplex gene expression maps obtained by voxelation Li An*1, Hongbo Xie2, Mark H Chin3... Megalooikonomou - vasilis@temple.edu * Corresponding author Abstract Background: Gene expression signatures... of expression patterns in the mouse brain. On the other hand, ... |
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Source: Obradovic, Zoran - Center for Information Science and Technology & Department of Computer and Information Sciences, Temple University |
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Collection: Computer Technologies and Information Sciences |
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| 7 | Introduction Composed of six cellular layers, the neocortex is a modular | ||
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Summary: genes such ephrin B2 and ephrin A5. Section in situ hybridisation for the rostrally expressed gene Klf3... areas, as assessed by gene expression, occurs normally in the absence of thalamocortical innervation... analyses of spatial and temporal ... |
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Source: McConnell, Susan - Department of Biology, Stanford University |
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Collection: Biology and Medicine |
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| 8 | Highthroughput soybean gene expression analysis The changes in the atmosphere are altering gene expression and affecting the interaction | ||
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Summary: Highthroughput soybean gene expression analysis The changes in the atmosphere are altering gene... soybean oligoarrays to analyze changes in the gene expression profile. Affymetrix GeneChip® Soybean Genome... expression and affecting the ... |
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Source: DeLucia, Evan H. - Department of Plant Biology, University of Illinois at Urbana-Champaign |
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Collection: Environmental Sciences and Ecology |
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| 9 | 10.1101/gr.6824707Access the most recent version at doi: published online Aug 21, 2007;Genome Res. | ||
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Summary: downstream genes with internal promoters, except T19A5.5, have cDNA coverage (Supplemental Table 1). Figure 2... promoters differ in tissue specificity from expression of operon promoters, and serial analysis of gene... expression data reveals that there is a lack of ... |
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Source: Baillie, David - Department of Molecular Biology and Biochemistry, Simon Fraser University |
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Collection: Biology and Medicine |
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| 10 | BioMed Central Page 1 of 16 | ||
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Summary: Research article A microarray analysis of sex- and gonad-biased gene expression in the zebrafish: Evidence... of gene expression between the sexes, and microarray studies have documented widespread sexually dimorphic... gene expression. Although the evolutionary ... |
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Source: Jones, Adam - Department of Biology, Texas A&M University |
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Collection: Biology and Medicine |
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| 11 | Systematic functional analysis of the Caenorhabditis elegans | ||
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Summary: (for example, neuronally expressed genes) are relatively resistant to RNAi7,9 and because Vpep... expression of X-linked genes does not explain the entire difference, however, because X-linked and autosomal... genes with similar germline expression profiles have very ... |
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Source: Ahringe, Julie - Wellcome Trust/Cancer Research UK Gurdon Institute, University of Cambridge; Hahn, Mark E. - Biology Department, Woods Hole Oceanographic Institution |
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Collection: Biology and Medicine ; Environmental Sciences and Ecology |
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| 12 | IN F LU EN C E OF N ETWOR K TOP OLOGY A N D D A TA C OLLEC TION ON N ETWOR K IN F ER EN C E | ||
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Summary: of genes have recently become available due to advances in gene expression array analysis. Functional... , electrophysiological activity in distinct brain regions, and gene expression in these brain regions for six subject... in the same range. Three factors influence ... |
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Source: Smith, V Anne - School of Biology, University of St Andrews |
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Collection: Environmental Sciences and Ecology ; Computer Technologies and Information Sciences |
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| 13 | IN F LU EN C E OF N ETWOR K TOP OLOGY A N D D A TA C OLLEC TION ON N ETWOR K IN F ER EN C E | ||
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Summary: of genes have recently become available due to advances in gene expression array analysis. Functional... . Activity in the fifth region wanders randomly in the same range. Three factors influence gene expression... function moves each gene towards its constitutive ... |
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Source: Hartemink, Alexander - Center for Bioinformatics and Computational Biology & Department of Computer Science, Duke University |
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Collection: Biotechnology ; Computer Technologies and Information Sciences |
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| 14 | IN F LU EN C E OF N ETWOR K TOP OLOGY A N D D A TA C OLLEC TION ON N ETWOR K IN F ER EN C E | ||
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Summary: of genes have recently become available due to advances in gene expression array analysis. Functional... behavior, electrophysiological activity in distinct brain regions, and gene expression in these brain... . Activity in the fifth region wanders randomly in the same range. Three ... |
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Source: Jarvis, Erich D. - Department of Neurobiology, Duke University |
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Collection: Biology and Medicine |
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| 15 | Deconstructing cell determination: proneural genes | ||
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Summary: ), and photoreceptors. Since the progeny of the precursor behaves according to which proneural gene was expressed, yet... the proneural genes themselves stop being expressed before the precursor divides, other genes must carry over... the difference between scute-dependent and ... |
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Source: Montpellier II, Université - Ecole Pratique des Hautes Etudes, Laboratoire de Biologie Cellulaire Quantitative |
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Collection: Biology and Medicine |
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| 16 | Expression Pattern Shifts Following Duplication Indicative of Subfunctionalization and Neofunctionalization in | ||
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Summary: of expression or coding sequence. In order to test the hypothesis that duplicated regulatory genes... /or neofunctionalization, we examined expression pattern shifts in duplicated regulatory genes in Arabidopsis. A two... of nonsynonymous to synonymous substitutions. Ancestral gene ... |
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Source: dePamphilis, Claude - Department of Biology, Pennsylvania State University |
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Collection: Environmental Sciences and Ecology |
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| 17 | Nucleic Acids Research, 1993, Vol. 21, No. 8 1687-1688 A rational nomenclature for vertebrate homeobox (HOX | ||
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Summary: . POSTE H lab Al pb A2 A3 Dfd A4 Scr A5 Antp A6 Ubx A7 abd-A Abd-B A9 A10 Al1 lox A H M IF 1.6 1K 1.11 1E... homeobox (HOX genes Matthew P.Scott Departments of Developmental Biology and Genetics, Stanford University... homeotic genes which in vertebrates are called Hox genes. The ... |
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Source: Scott, Matthew - Departments of Developmental Biology, Genetics, & Bioengineering, Stanford University |
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Collection: Biotechnology ; Biology and Medicine |
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| 18 | Cooperative Competition Clustering for Gene Selection Shun Pei1,2 | ||
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Summary: in the synthetic data set and then added noises to the data set by replacing 25% of the gene values of {A4,A5... A... results on a synthetic and gene expression data are demonstrated. The results show that CCCA can choose... . KEY WORDS: Cooperative competition clustering; ACA; ... |
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Source: Hefei Institute of Intelligent Machines - Intelligent Computing Lab |
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Collection: Computer Technologies and Information Sciences |
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| 19 | Current Biology, Vol. 12, 15661573, September 17, 2002, 2002 Elsevier Science Ltd. All rights reserved. PII S0960-9822(02)01146-6 Transcriptional Profile of Aging in C. elegans | ||
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Summary: as chronological age increases [9]. Similarly, few genes were found to be differentially expressed over... While age-related changes in gene expression have been found in studies of small numbers of genes [10... ray expression studies in flies, mice, and monkeys have ... |
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Source: Kim, Stuart - Department of Developmental Biology, Stanford University |
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Collection: Biology and Medicine |
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| 20 | Vol. 22 no. 14 2006, pages e417e423 doi:10.1093/bioinformatics/btl256BIOINFORMATICS | ||
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Summary: , and the reporter gene that contains R11A5.4 promoter is expressed in C muscle cells. The experimental results... verification of predictions We predict K01A2.5 and R11A5.4, two uncharacterized genes, as enriched in C lineage... , respectively. We ... |
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Source: Jaakkola, Tommi S. - Computer Science and Artificial Intelligence Laboratory & Department of Electrical Engineering and Computer Science, Massachusetts Institute of Technology (MIT) |
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Collection: Computer Technologies and Information Sciences |
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| 21 | Vol. 22 no. 14 2006, pages e417e423 doi:10.1093/bioinformatics/btl256BIOINFORMATICS | ||
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Summary: in C epidermis cells, and the reporter gene that contains R11A5.4 promoter is expressed in C muscle... 11A5.4 as muscle enriched. We examine their expression patterns by reporter assay. The expression... , respectively. We ... |
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Source: Gifford, David K. - Computer Science and Artificial Intelligence Laboratory & Department of Electrical Engineering and Computer Science, Massachusetts Institute of Technology (MIT) |
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Collection: Computer Technologies and Information Sciences ; Biotechnology |
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| 22 | Genome Holography: Deciphering Function-Form Motifs from Gene Expression Data | ||
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Summary: -argC 2-comGA 3-ybcO 4-xtmA 5-dltA 6-purE 7-sboA Genes argC comGA ybcO xtmA dltA purE sboA argJ com... Genome Holography: Deciphering Function-Form Motifs from Gene Expression Data Asaf Madi1... information from the vast amount of raw gene-expression data obtained from ... |
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Source: Jacob, Eshel Ben - School of Physics and Astronomy, Tel Aviv University |
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Collection: Physics |
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| 23 | NATURE BIOTECHNOLOGY VOLUME 24 NUMBER 5 MAY 2006 537 Gene prioritization through genomic | ||
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Summary: ,10, the published literature5,7, gene expression data5,7,10 and sequence information810, most of the available... ); B, functional annotation (Gene Ontology); C, microarray expression (Atlas gene expression); D, EST... disease SLC22A4, ... |
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Source: Leuven, Katholieke Universiteit, Department of Electrical Engineering, SCD Division |
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Collection: Engineering |
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| 24 | Biol. Cybern. 74, 557-567 (1996) Biological Cybernetics9 Springer-Verla$1996 | ||
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Summary: 's expression and there- by form stable gene expression patterns. It is then studied how genetic redundancy... on the evolution of HOM/Hox genes. 1 Introduction Probably the most important way of controlling gene expression... in a network-like fashion of cross- and ... |
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Source: Wagner, Andreas - Department of Biochemistry, Universität Zürich |
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Collection: Biology and Medicine |
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| 25 | Open Access Full open access to this and | ||
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Summary: Differential Gene expression in cross-species Hybridization experiments at Gene and probe Level Ying chen1... , Materials and Life sciences Directorate, Lawrence Livermore national Laboratory, Livermore, cA. 5 Y.c. and A... developed for one species are used to study ... |
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Source: Rocke, David M. - Division of Biostatistics & Department of Applied Science, University of California, Davis |
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Collection: Computer Technologies and Information Sciences ; Biotechnology |
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| 26 | Scaling of stochasticity in gene cascades Abhyudai Singh and Jo~ao Pedro Hespanha | ||
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Summary: -- Stochastic fluctuations in protein levels are in- evitable due to the probabilistic nature of gene expression... protein. I. INTRODUCTION Gene expression is inherently a noisy process. The cause for this stochasticity... ) which make up gene expression and ... |
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Source: Hespanha, João Pedro - Department of Electrical and Computer Engineering, University of California at Santa Barbara |
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Collection: Engineering |
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| 27 | JOURNAL OF BACTERIOLOGY, Sept. 1995, p. 53685369 Vol. 177, No. 18 0021-9193/95/$04.00 0 | ||
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Summary: to the expression level of the downstream gene. It is suggested that this could be a strategy to avoid interference... distances and gene expression levels. To compile a data set of intergenic distances between genes... the relationship between intergenic distances and ... |
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Source: Eyre-Walker, Adam - Department of Biology and Environmental Science, University of Sussex |
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Collection: Biology and Medicine |
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| 28 | BIOINFORMATICS ORIGINAL PAPER Vol. 25 no. 7 2009, pages 875881 | ||
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Summary: (ANXA3) and A5 (ANXA5). We found only 17 genes consistently underexpressed with age at a cutoff of P <0... 3A1, COL1A1 and COL4A5). The top gene was the transferrin receptor TFRC. Interestingly, nine genes... Gene ... |
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Source: Church, George M. - Wyss Institute for Biologically Inspired Engineering & Department of Genetics, Harvard University; de Magalhães, João Pedro - School of Biological Sciences, University of Liverpool |
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Collection: Biology and Medicine ; Biotechnology |
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| 29 | Genes directly controlled by CtrA, a master regulator of the Caulobacter cell cycle | ||
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Summary: of the seven genes previously identified as directly controlled by CtrA (58). The gene not detected, fliX, has... these data with previous global analysis of cell cycle transcription patterns and gene expression profiles... 3). Similar global analysis of cell ... |
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Source: McAdams, Harley - Department of Developmental Biology, Stanford University |
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Collection: Biology and Medicine |
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| 30 | Relationships between gene expression and brain wiring in the adult rodent brain Leon French and Paul Pavlidis | ||
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Summary: Relationships between gene expression and brain wiring in the adult rodent brain Leon French... and guidance signals. To examine the global relationships between gene expression and neuroanatomical... connectivity we examine large scale gene expression signatures in ... |
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Source: Sahinalp, S. Cenk - School of Computing Science, Simon Fraser University |
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Collection: Biology and Medicine ; Computer Technologies and Information Sciences |
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| 31 | Optimal Gene Trees from Sequences and Species Trees Using a Soft Interpretation of Parsimony | ||
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Summary: is then used in equations (A3)(A5) to calculate the minimum number of losses associated with the gene tree... gene tree vertex as shown in expression (1). Since the numbers of duplications associated with each... in (IV). Now the minimum number of losses for the ... |
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Source: Liberles, David - Department of Molecular Biology, University of Wyoming |
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Collection: Biology and Medicine |
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| 32 | The Status of Dosage Compensation in the Multiple X Chromosomes of the Platypus | ||
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Summary: SHB + 752F12 X5 SEMA6A + 271G4 X5 SLC1A1 + 236A5 X5 ZNF474 + LOX + Expression detected in fibroblasts... not to be strictly required to equalize the expression of most Z-borne genes between ZZ male and ZW female birds... . An autosomal control gene was ... |
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Source: McQueen, Heather - School of Biological Sciences, University of Edinburgh |
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Collection: Biology and Medicine |
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| 33 | Genome-wide Analysis of Polymorphic Differences That Affect Gene Expression | ||
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Summary: Genome-wide Analysis of Polymorphic Differences That Affect Gene Expression Leonid Kruglyak Ecology... to understand the genetics of variation in gene expression, we carried out genetic linkage analysis of genome... genes were differentially expressed between the ... |
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Source: Singh, Jaswinder Pal - Department of Computer Science, Princeton University |
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Collection: Computer Technologies and Information Sciences |
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| 34 | Genomes & Developmental Control Identification of C. elegans sensory ray genes using whole-genome | ||
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Summary: . Here, we use full-genome DNA microarrays to compare gene expression profiles in adult males of two... , including the Zn-finger factor egl-46 and the bHLH gene hlh-10. The expression of many of these genes... by their morphologies and patterns of gene ... |
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Source: Emmons, Scott - Department of Molecular Genetics, Albert Einstein College of Medicine, Yeshiva University; Portman, Douglas - Department of Biology, University of Rochester |
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Collection: Biology and Medicine |
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| 35 | Reverse Engineering Algorithm transcription | ||
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Summary: molecular biology techniques provide gene expression (mRNA) levels of selected genes of an organism... to infer (gene expression levels).A. Target Network Biological case Measurements In silico case Simulations... ) = 1 / (1 + e-y ) xi : expression level of ... |
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Source: Lausanne, Ecole Polytechnique Fédérale de - Processor Architecture Laboratory |
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Collection: Engineering ; Computer Technologies and Information Sciences |
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| 36 | Targeting gene expression to tumor cells with loss of wild-type p53 function | ||
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Summary: Targeting gene expression to tumor cells with loss of wild-type p53 function Jingde Zhu,1,2 Baomei... positively regulate the expression of critical target genes involved in negative control of cell growth... transcription to develop a novel gene therapy strategy that maximizes ... |
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Source: Tian, Weidong - Institute of Biochemistry and Cell Biology, Shanghai Institute of Biological Sciences |
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Collection: Biology and Medicine |
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| 37 | Evolution of the Major Histocompatibility Complex: Independent Origin of Nonclassical Class I Genes | ||
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Summary: expression of classical class I genes, but they have accumulated numerous nucleotide substitutions... for the class I MHC gene family. On the basis of degree of gene expression, class I genes can be divided... into three groups: ( 1) the classical class I ... |
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Source: Nei, Masatoshi - Department of Biology, Pennsylvania State University |
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Collection: Environmental Sciences and Ecology ; Biology and Medicine |
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| 38 | Sea Urchin Hox Genes: Insights into the Ancestral Hox Cluster Ellen Popodi, * Jessica C. Kissinger, 1_ Mary E. Andrews," and Rudolf A. RafJ" | ||
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Summary: . Is the genomic structure of these genes conserved in this group? If so, are the genes expressed in an overlapping... HemmX9 1 Arrphihox-4 1 m a-4 1 mb-4 m c-4 m d-4 1 d Dfd &r&ihax-5 1 m a-5 mb-5 m c-5 1 dScr 1 10 20 30... . 1989. Progressively restricted ... |
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Source: Kissinger, Jessica - Department of Genetics, University of Georgia |
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Collection: Environmental Sciences and Ecology ; Biology and Medicine |
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| 39 | TheJournalofExperimentalMedicine JEM The Rockefeller University Press $30.00 | ||
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Summary: 3 and V 4 genes, located downstream in the TCR C 1 gene cluster, are expressed by the earliest waves... genes are expressed in later waves in the adult and constitute most TCR + T cells in secondary lymphoid... of the fetal thymus for the production of T cells ... |
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Source: Raulet, David - Department of Molecular and Cell Biology, University of California at Berkeley |
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Collection: Biology and Medicine |
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| 40 | A Systems Approach Uncovers Restrictions for Signal Interactions Regulating Genome-wide Responses to | ||
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Summary: , such that the expression Yi of a genei is given by: Yi = a0+a1C+a2L+a3N+a4O+a5CL+a6CN+a7 CO+a8LN+a9NO+a10LO+a11CNL+a12LNO... the organs as a factor, such that the expression Yi of a genei is given by: Yi = a0+a1C+a2L+a3N+a4O+a5CL+a6CN... . For example, L is the major ... |
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Source: Ecole Polytechnique, Centre de mathématiques |
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Collection: Mathematics |
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| 41 | A Framework of Automated Reconstruction of Microbial Metabolic Pathways Arvind K. Bansal | ||
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Summary: a part of a metabolic pathway or by regulating the gene-expression, the production of a specific... R) Pentose and glucuronate Interconversions: (araD:5.1.3.4, araA:5.3.1.4, araB:2.7.1.16), (lyxk:2... .2.1.19, hisH:2.4.2.-, hisA:5.3.1.16, hisF:2.4.2.-, hisI:3.5.4.19) Fatty acid ... |
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Source: Bansal, Arvind K. - Department of Computer Science, Kent State University |
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Collection: Computer Technologies and Information Sciences |
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| 42 | A Single-stranded DNA-binding Protein of Bacteriophage T7 Defective in DNA Annealing* | ||
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Summary: annealing activ- ity. Expression of gene 2.5 harboring this mutation does not complement the growth of a T7... )) (Novagen) was used to express gene 2.5. T7 2.5 phage used in the in vivo DNA synthesis experiments... .5 protein (31). A 1-liter culture of E. coli BL21(DE3) (Novagen) ... |
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Source: Richardson, Charles C. - Department of Biological Chemistry and Molecular Pharmacology, Harvard University |
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Collection: Biology and Medicine |
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| 43 | High throughput imaging of brain gene expression | ||
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Summary: High throughput imaging of brain gene expression Vanessa M. Brown1,2 , Alex Ossadtchi3 , Arshad H... is a new method for acquisition of 3D gene expression patterns in the brain. It employs high throughput... analysis of spatially registered voxels (cubes) to produce multiple volumetric maps of ... |
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Source: Smith, Desmond J. - Department of Molecular and Medical Pharmacology, University of California at Los Angeles |
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Collection: Biology and Medicine |
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| 44 | Construction of Metagenes by Conditional Factor Analysis Andreas Mayr, Djork-Arne Clevert, Andreas Mitterecker, An De Bondt, Willem Talloen, Hinrich Ghlmann, | ||
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Summary: is a hidden factor of the expression values which varies around the expression value of this gene. Increasing... the variation around the expression of the chosen gene allows estimating the factor by including more genes... Mitterecker, An De Bondt, Willem Talloen, ... |
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Source: Hochreiter, Sepp - Institute of Bioinformatics, Johannes Kepler Universität Linz |
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Collection: Biology and Medicine ; Computer Technologies and Information Sciences |
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| 45 | JARO 03: 140148 (2001) DOI: 10.1007/s101620020029 | ||
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Summary: JARO 03: 140148 (2001) DOI: 10.1007/s101620020029 An Inner Ear Gene Expression Database ZHENG... of the genes expressed, the timing of their dented opportunity to study gene expression profiles expression... the pattern of ... |
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Source: Corey, David P. - Department of Neurobiology, Harvard University |
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Collection: Biology and Medicine |
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| 46 | BIOINFORMATICS Vol. 19 Suppl. 1 2003, pages i222i224 DOI: 10.1093/bioinformatics/btg1030 | ||
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Summary: Note project (Shmueli et al., 2003), it will soon be possible to include gene expression information in Gene... option. Included are genes present in one source but excluded by the other. expression profiles... ,R., Benjamin-Rodrig,H., Safran,M., Domany,E. and Lancet,D. (2003) ... |
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Source: Lancet, Doron - Department of Molecular Genetics, Weizmann Institute of Science; Pilpel, Yitzhak - Department of Molecular Genetics, Weizmann Institute of Science |
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Collection: Biology and Medicine |
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| 47 | October 9, 2006 22:35 Proceedings Trim Size: 9.75in x 6.5in apbc223a TWO PLUS TWO DOES NOT EQUAL THREE | ||
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Summary: Trim Size: 9.75in x 6.5in apbc223a 5 number of ways of choosing genes to fill two windows of size r1... obtain expressions for the probability--under the null hy- pothesis of random gene order--that the number... of shared genes is at least as large as the number ... |
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Source: Durand, Dannie - Departments of Computer Science & Biological Sciences, Carnegie Mellon University |
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Collection: Computer Technologies and Information Sciences ; Biology and Medicine |
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| 48 | A postgenomic method for predicting essential genes at subsaturation levels of mutagenesis | ||
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Summary: expression of gene fragments has also been used to identify essential genes on a global scale (2... the expression a distal of gene whose product is essential. Bioinformatics. Sequences of the transposon junction... was performed with primers HimarSP2 (5 -CCGAGATAGGGTGAGTGTTGTTCCAG) and ... |
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Source: Broman, Karl W. - Department of Biostatistics and Medical Informatics, University of Wisconsin at Madison |
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Collection: Biology and Medicine |
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| 49 | [CANCER RESEARCH 61, 59795984, August 15, 2001] Advances in Brief | ||
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Summary: by SAGE tags. Of these, only four genes (CCND1, STC2, SLC7A5, and KRT18) were regulated by E2 in MCF-7... in Breast Cancer Is Associated with Remarkably Distinct Gene Expression Patterns1 Sofia Gruvberger, Markus... in breast carcinoma, gene ... |
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Source: Peterson, Carsten - Department of Theoretical Physics, Lunds Universitet; Ringnér, Markus - Department of Theoretical Physics, Lunds Universitet |
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Collection: Biotechnology ; Physics |
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| 50 | December 1, 2004 17:46 WSPC/INSTRUCTION FILE jbcbrevised Journal of Bioinformatics and Computational Biology | ||
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Summary: EXPRESSED GENES SACH MUKHERJEE & STEPHEN J. ROBERTS Department of Engineering Science University of Oxford... task of selecting differen- tially expressed genes from microarray data (`gene selection'). Numerous... selection, in which the probability of successfully selecting ... |
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Source: Roberts, Stephen - Department of Engineering Science, University of Oxford |
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Collection: Engineering |
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| 51 | Agrobacterium tumefaciens is a plant-patho-genic bacterium notorious for its ability to | ||
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Summary: -DNA through the plant cell membrane: dig it yourself! Gene expression is controlled by a variety of mechanisms... and thereby reduces the expression of a specific gene. PTGS has many names: cosuppression in plants, quelling... in fungi and RNA interference in animals, but in all cases, degraded mRNA ... |
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Source: Ulm, Roman - Department of Botany and Plant Biology, University of Geneva |
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Collection: Biology and Medicine |
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| 52 | 10.1101/gad.2.3.350Access the most recent version at doi: 1988 2: 350-360Genes Dev. | ||
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Summary: reduced, Antennapedia, ofhomeotic gene expression in Drosophila embryos: distributions Temporal... and spatial relationships between segmentation and homeotic gene expression in Drosophila embryos... of the different genes are described with single-cell resolution. Boundaries of ... |
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Source: Scott, Matthew - Departments of Developmental Biology, Genetics, & Bioengineering, Stanford University |
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Collection: Biotechnology ; Biology and Medicine |
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| 53 | Visualization of Gene Combinations Christian Tominski & Heidrun Schumann | ||
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Summary: · Microarrays are fundamental technology · Huge volumes of microarray data collected: Gene Expression Omnibus... : S Gene expression: expG : G x S -> R · Many tools exists to visualize expG 2D Scatter Plot 3D Scatter... focus on expression of single genes · ... |
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Source: Tominski, Christian - Institut für Informatik, Universität Rostock |
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Collection: Computer Technologies and Information Sciences |
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| 54 | Evolutionary Origins of Genomic Repertoires in Bacteria | ||
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Summary: evolution of sequence changes conferring differences in expression or function, whereas genes arriving... ], Xylella fastidiosa 9a5c [46], P. aeruginosa PA01 [47], and W. glossinidia brevipalpis [48]. Protein... pv. citri 306 (NC 003919), Xanthomonas campestris (NC 003902), Xylella fastidiosa ... |
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Source: Ochman, Howard - Department of Ecology and Evolutionary Biology, Yale University |
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Collection: Environmental Sciences and Ecology ; Biology and Medicine |
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| 55 | Testing Groups of Genes Manuela Hummel, LMU Munchen | ||
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Summary: of published results · . . . #12;Assess Relevance of Gene Groups · Outstanding gene expression in a specific... group compared to other genes Example: Do the cyclin D1 target genes show an extraordi- nary expression... pattern in human tumours? · Differential ... |
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Source: Spang, Rainer - Computational Molecular Biology Group, Max Planck Institute for Molecular Genetics |
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Collection: Computer Technologies and Information Sciences ; Biotechnology ; Biology and Medicine |
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| 56 | Uneven size distribution of mammalian genes in the number of tissues expressed and in the number | ||
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Summary: Uneven size distribution of mammalian genes in the number of tissues expressed and in the number... of co-expressed genes Song Liu, Chi Zhang and Yaoqi Zhou* Department of Physiology and Biophysics... and their relation to the number of tissues expressed and to the number of ... |
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Source: Zhou, Yaoqi - School of Informatics, Indiana University |
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Collection: Biology and Medicine |
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| 57 | Network biology for gene prioritization Computational biology for human genetics | ||
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Summary: process with experimental data on differential gene expression between affected and healthy individuals... on the assumption that strong candidate genes tend to be surrounded by many differentially expressed neighboring... expression omnibus GP Gene prioritization ... |
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Source: Leuven, Katholieke Universiteit, Department of Electrical Engineering, SCD Division |
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Collection: Engineering |
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| 58 | D3 receptor knockout mice have altered circadian gene expression patterns in spinal sympathetic preganglionic neurons | ||
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Summary: D3 receptor knockout mice have altered circadian gene expression patterns in spinal sympathetic... biological regulators, and we have previously shown the circadian variation of gene expression... expression changed throughout the day. Compared to the expression ... |
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Source: Hochman, Shawn - Department of Physiology, Emory University |
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Collection: Biology and Medicine |
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| 59 | JARO 03: 045053 (2001) DOI: 10.1007/s101620020005 | ||
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Summary: 1), COL4A5 (Alport syndrome), ESTs, that represent a unique gene. Currently 358COL11A1 (Stickler... the prior study revealed 338 additional To identify genes involved in hearing, 8494 expressed known human... represent genes uniquely or preferentially new cochlear ... |
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Source: Weng, Zhiping - Center for Advanced Genomic Technology, Boston University |
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Collection: Biotechnology |
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| 60 | INTRODUCTION Early Drosophila embryogenesis is optimized for rapid | ||
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Summary: is a segmental blueprint in the form of segment polarity gene expression patterns. Shortly thereafter, the first... , these studies suggest that the main function of Odd may be to repress expression of the ftz, en and wg genes... expression to test the response of these and other ... |
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Source: Krause, Henry M. - Department of Molecular and Medical Genetics, University of Toronto |
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Collection: Biology and Medicine |
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| 61 | Genome expression analysis of Anopheles gambiae: Responses to injury, bacterial challenge, and | ||
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Summary: -1671 Contributed by Fotis C. Kafatos, May 8, 2002 The complex gene expression responses of Anopheles gambiae... . (C). Reproducibility of un-averaged expression data (i) of a gene of complex splicing pattern... of these to functional classes. Differential gene ... |
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Source: Wilkinson, Gerald S. - Department of Biology, University of Maryland at College Park |
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Collection: Environmental Sciences and Ecology ; Biology and Medicine |
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| 62 | Annu. Rev. Phytopathol. 2004. 42:16384 doi: 10.1146/annurev.phyto.42.040803.140310 | ||
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Summary: between XF-9a5a and XAC. Based on this analysis, genes and operons were identified that might be rel... . By contrast, XF-9a5c possesses more genes involved with type IV pili biosynthesis than does XAC, contains... ,679,305 bp) and the gene content ... |
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Source: Setubal, João Carlos - Department of Computer Science, Virginia Tech |
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Collection: Computer Technologies and Information Sciences |
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| 63 | An update on the nomenclature for the cellulose synthase genes in Populus | ||
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Summary: ) or more ancient (the AtCesA2/AtCesA9 paralogues and the AtCesA5/AtCesA6 paralogues) gene duplication... and complexes involved in secondary cell wall formation. Thus, expression of at least three different gene... products, CesA1, CesA3 and one of the CesA6-related CesAs (CesA2, ... |
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Source: Han, Kyung-Hwan - Deparment of Forestry, Michigan State University |
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Collection: Biotechnology |
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| 64 | BIO VIEWBIO VIEWT A K A R A B I O E U R O P E E D I T I O N | ||
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Summary: to use and low cost. For some genes, however, expression is difficult and expressed proteins... expression vector based on the low-temperature expression gene (cold-shock gene) of E. coli. This product has... ' untranslated region ... |
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Source: Lebendiker, Mario - Wolfson Centre for Applied Structural Biology, Hebrew University of Jerusalem |
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Collection: Biotechnology ; Biology and Medicine |
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| 65 | Plasticity of the Chemoreceptor Repertoire in Drosophila melanogaster | ||
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Summary: genes and the antenna-specific a5 and a10 genes (Figure 7C). With the exception of Obp19c, all... , 59 Gr genes, four genes encoding antennal specific proteins (a5, a10, smi21F, Os9), plus two... asked whether ... |
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Source: Mackay, Trudy F.C. - Department of Genetics, North Carolina State University |
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Collection: Biology and Medicine |
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| 66 | NATURE |VOL 408 |16 NOVEMBER 2000 |www.nature.com 325 Functional genomic analysis of | ||
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Summary: with bacteria that express double-stranded RNA. We have assigned function to 13.9% of the genes analysed... . Ingestion of dsRNA- expressing bacteria results in RNAi of the targeted gene7 , and we previously... on chromosome I by RNAi We constructed a library of bacteria expressing dsRNA ... |
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Source: Ahringe, Julie - Wellcome Trust/Cancer Research UK Gurdon Institute, University of Cambridge |
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Collection: Biology and Medicine |
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| 67 | The Transcriptional Response of Drosophila melanogaster to Infection with the Sigma Virus | ||
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Summary: an antiviral immune response. Using microarrays, we examined the changes in gene expression in Drosophila... overrepresented among the differentially expressed genes. We also found that the sigma virus alters the expression... immune pathways. If the latter is true, the ... |
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Source: Halligan, Daniel - Institute of Evolutionary Biology, University of Edinburgh; Jiggins, Francis - Department of Genetics, University of Cambridge |
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Collection: Environmental Sciences and Ecology |
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| 68 | High-Throughput In Vivo Analysis of Gene Expression in Caenorhabditis elegans | ||
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Summary: D1081.2. (F) Vulval muscle (long arrow) and ventral nerve cord (short arrow)--gene Y32H12A.5. (G... ::GFP Constructs (A) Vulval muscles (lateral view: long arrow, ventral view: short arrow)--gene F54A5.3a (inset F33... High-Throughput In Vivo Analysis of ... |
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Source: Baillie, David - Department of Molecular Biology and Biochemistry, Simon Fraser University; Moerman, Donald G. - Department of Zoology, University of British Columbia |
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Collection: Biology and Medicine |
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| 69 | Genome Biology 2005, 6:R22 commentreviewsreportsdepositedresearchrefereedresearchinteractionsinformation | ||
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Summary: of gene expression in normal human tissues Radha Shyamsundar*,Young H Kim*,John P Higgins... the original work is properly cited. Gene expression profiles in normal human tissues A systematic survey... of gene expression in 115 human tissue samples using cDNA ... |
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Source: Botstein, David - Lewis-Sigler Institute for Integrative Genomics & Department of Molecular Biology, Princeton University |
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Collection: Biology and Medicine |
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| 70 | Chapter 19: Entrez Gene: A Directory of Genes Donna Maglott | ||
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Summary: information about genes, serving as a major node in the nexus of genomic map, sequence, expression, protein... Expression Nervous System Atlas (GENSAT), the Gene Expression Omnibus (GEO) , HomoloGene, Online Mendelian... for incompletely characterized ... |
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Source: Levin, Judith G. - Laboratory of Molecular Genetics, National Institutes of Health |
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Collection: Biology and Medicine |
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| 71 | LINEAR MODELING OF mRNA EXPRESSION LEVELS DURING CNS DEVELOPMENT AND INJURY | ||
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Summary: of the important tools in functional genomics is the largescale gene expression assay. Using advanced molecular... biology techniques, it has become possible to measure the gene expression levels (mRNA levels) of most... published a Gene Expression Matrix of 112 ... |
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Source: D'haeseleer, Patrik - Biology and Biotechnology Research Program, Lawrence Livermore National Laboratory |
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Collection: Biotechnology ; Biology and Medicine |
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| 72 | Proc. Natl. Acad. Sci. USA Vol. 96, pp. 92129217, August 1999 | ||
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Summary: Proc. Natl. Acad. Sci. USA Vol. 96, pp. 92129217, August 1999 Genetics Distinctive gene expression... ABSTRACT cDNA microarrays and a clustering algo- rithm were used to identify patterns of gene expression... of genes with coherent expression patterns in cultured ... |
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Source: Botstein, David - Lewis-Sigler Institute for Integrative Genomics & Department of Molecular Biology, Princeton University |
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Collection: Biology and Medicine |
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| 73 | Evolution of a Core Gene Network for Skeletogenesis in Jochen Hecht1,2 | ||
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Summary: three dogfish Runt genes are expressed in the developing placoid scales (Figure 5A5C). Interestingly... hybridization to characterize the distribution of Runt expression in the skin (Figure 5A5C). All three Runt... early vertebrate evolution. ... |
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Source: Max-Planck-Institut für molekulare Genetik - Evolution and Development Group |
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Collection: Biology and Medicine |
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| 74 | Functional Divergence of Duplicated Genes Formed by Polyploidy during Arabidopsis Evolution W | ||
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Summary: , the expression of each gene is strongly correlated with the other nonhomologous genes in its network but poorly... , and repeat invasion) and epi- genetic changes (resulting in gene silencing, novel expression, and mobile... be expressed at different times or in ... |
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Source: Wolfe, Kenneth H. - Genetics Department, Trinity College, University of Dublin |
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Collection: Biotechnology ; Environmental Sciences and Ecology |
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| 75 | The genetic code of gene regulatory elements Ivan Ovcharenko | ||
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Summary: elements (REs) orchestrate temporal and spatial expression of genes · Genetic deletion of E1 element... decreased the expression of IL4, IL13, and IL5 3-fold · REs were identified for a handful of genes... a specific pattern of gene expression · Correlating ... |
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Source: Singh, Jaswinder Pal - Department of Computer Science, Princeton University |
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Collection: Computer Technologies and Information Sciences |
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| 76 | Exploration and Analysis of DNA Microarray and Protein Array Data | ||
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Summary: A2 A3 A4 A5 Test 2 Group: B1 B2 B3 B4 B5 #12;20 Single-channel spot intensity data Gene C1 C2 C3 A1... and procedures (DA) 2. Preprocessing microarray data (DA) 3. Finding differentially expressed genes (DA&JC) 4... and Protein Array Data Dhammika Amaratunga & Javier Cabrera ... |
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Source: Cabrera, Javier - Department of Statistics, Rutgers University |
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Collection: Biology and Medicine ; Mathematics |
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| 77 | BIOINFORMATICS APPLICATIONS NOTE Vol. 20 no. 9 2004, pages 14571458 | ||
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Summary: ://genecards.weizmann.ac.il/geneannot/DOC/ index.html INTRODUCTION Affymetrix GeneChip® expression array sets are designed to represent nearly... ') derived from cDNAs, predicted genes and expressed sequence tags (ESTs; `representative sequences... of annotation from GeneCards' nearly 40 ... |
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Source: Lancet, Doron - Department of Molecular Genetics, Weizmann Institute of Science |
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Collection: Biology and Medicine |
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| 78 | Genome-wide association (GWA) studies of common com-plex or multifactorial diseases have been spectacularly | ||
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Summary: to be correlated with decreased SLC22A5 (solute carrier family 22, member 5) mRNA expression levels. Another CD... significant results3 , and vari- ation in gene expression is probably a more important mechanism underlying... . The combina- tion of whole-genome genetic association studies ... |
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Source: Abecasis, Goncalo - Department of Biostatistics, University of Michigan; Liang, Liming - Departments of Biostatistics & Epidemiology, Harvard University |
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Collection: Biology and Medicine ; Mathematics |
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| 79 | The role of mobile genetic elements in bacterial adaptation to xenobiotic organic compounds | ||
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Summary: [53]. Other elements Tn4371 Ralstonia oxalatica A5 Biphenyl/ 4-chlorobiphenyl 55 This element... range of several catabolic MGEs and the expression range of their catabolic genes. Furthermore, we also... seems to occur by an assembly process that involves horizontal gene transfer: ... |
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Source: Top, Eva - Department of Biological Sciences, University of Idaho |
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Collection: Environmental Sciences and Ecology ; Biology and Medicine |
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| 80 | Current Biology, Vol. 14, 22452251, December 29, 2004, 2004 Elsevier Ltd. All rights reserved. DOI 10.1016/j.cub.2004.12.030 Identification of Thermosensory | ||
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Summary: . The expression enrichment. For each experiment, mRNA was isolatedpatterns of subsets of these genes were further... in Table S1). As a first step in data validation,In principle, genes expressed in an individual sensory... the expression of genes that were ... |
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Source: Samuel, Aravi - Department of Physics, Harvard University |
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Collection: Physics ; Biology and Medicine |
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| 81 | METHODOLOGY ARTICLE Open Access Missing genes in the annotation of prokaryotic | ||
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Summary: expressed genes, is known to average in the .80- .90 range for several species of Burkholderiales. However... sequence from Xylella fastidiosa 9a5c did not have hits when searched against nr-aa and the nucleotide... METHODOLOGY ARTICLE Open Access Missing genes in the annotation of ... |
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Source: Feng, Wu-chun - Departments of Computer Science & Electrical and Computer Engineering, Virginia Tech |
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Collection: Computer Technologies and Information Sciences |
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| 82 | A formal theory of the selfish gene A. GARDNER* & J. J. WELCH | ||
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Summary: the population genetic change that is driven by the differential fitness of genes. We express the change... such effects, giving an expression for the systematic selection of genes, hereafter `genic selection' (cf... selection, mediated by fitness differences between genes, is analogous ... |
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Source: Reece, Sarah - Institute of Immunology and Infection Research & School of Biological Sciences, University of Edinburgh |
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Collection: Environmental Sciences and Ecology ; Biology and Medicine |
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| 83 | A formal theory of the selfish gene A. GARDNER* & J. J. WELCH | ||
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Summary: an expression for the systematic selection of genes, hereafter `genic selection' (cf. Grafen, 2000 and Gardner... differences between genes, is analogous to expressions for natural selection, mediated by fitness differences... the phenotypes expressed by a given `social set' of ... |
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Source: Gardner, Andy - Department of Zoology, University of Oxford |
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Collection: Environmental Management and Restoration Technologies ; Biology and Medicine |
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| 84 | CLASS 1.4: 01/30/07 GENOME ORGANIZATION II | ||
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Summary: = - Systematically analyzed 6. Expressed genes - Not all genes - What is expressed in one tissue not expressed... in another; - Some genes are expressed at a. Abundance = i. Abundant RNAs = ii. Scarce or complex RNA... = - Transcriptome = - ... |
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Source: Andres, Andrew - School of Life Sciences, University of Nevada at Las Vegas |
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Collection: Biology and Medicine |
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| 85 | ORIGINAL ARTICLE Retroviral vector insertions in T-lymphocytes used for suicide gene therapy | ||
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Summary: cells such as primary TLCs, where alterations of gene expression have been reported previously.10 Here... .nature.com/bmt #12;comparison of integration site data. Targeted and adjacent genes were classified using the Express... N/A*N/A*Integrations 4321Donor 3 4 N/A* 5 ... |
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Source: Granada, Universidad de - Departamento de Ciencias de la Computación e Inteligencia Artificial, Soft Computing and Intelligent Information Systems |
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Collection: Computer Technologies and Information Sciences |
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| 86 | Appendix D: Knowledge Questions 1. You are investigating the changes in gene expression in cancer cells compared to normal cells | ||
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Summary: Appendix D: Knowledge Questions 1. You are investigating the changes in gene expression in cancer... cannot make a reasonable guess. 5. The figure shows the ratio of gene expression at the indicated time... to gene expression at time zero for several ... |
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Source: Campbell, A. Malcolm - Biology Department, Davidson College |
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Collection: Multidisciplinary Databases and Resources ; Biology and Medicine |
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| 87 | Evaluation of gene expression measurements from commercial microarray platforms | ||
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Summary: Evaluation of gene expression measurements from commercial microarray platforms Paul K. Tan, Thomas... ; Accepted August 11, 2003 ABSTRACT Multiple commercial microarrays for measuring genome-wide gene expression... . This study reports on the results of gene expression ... |
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Source: Dimitrov, Dimiter S. - Laboratory of Experimental and Computational Biology, National Cancer Institute |
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Collection: Biotechnology ; Biology and Medicine |
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| 88 | D J Gray, S A Dhekney, Z T Li, D L HopkinsD J Gray, S A Dhekney, Z T Li, D L Hopkins MidMid--Florida Research & Education CenterFlorida Research & Education Center | ||
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Summary: #12;Typical Gene Expression Cassette Modified EnhancerModified Enhancer Endogenous GeneEndogenous Gene... .eduwww.mrec.ifas.ufl.edu/grapes/genetics/grapes/genetics #12;Expression of Two Exogenous Genes via a Bidirectional Dual Promoter Complex US Patent # 7... ... |
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Source: Florida, University of - College of Engineering. Software and Analysis of Advanced Materials Processing Center |
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Collection: Computer Technologies and Information Sciences ; Materials Science |
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| 89 | PCR Fusion-Based Approach to Create Re- | ||
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Summary: PCR Fusion-Based Approach to Create Re- porter Gene Constructs for Expression Analysis... expression patterns are most often determined by generating a fusion of the promoter of the gene un- der... , the spatial expression pattern of only a few hun- dred genes has been ... |
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Source: Hobert, Oliver - Department of Biochemistry and Molecular Biophysics, Columbia University |
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Collection: Biology and Medicine |
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| 90 | Genome Biology 2005, 6:R72 commentreviewsreportsdepositedresearchrefereedresearchinteractionsinformation | ||
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Summary: . Facilitating large-scale gene regulation studies and promoter array construction Expression microarray and Ch... of promoter prediction for CpG-island related and non-CpG-island related promoters in different gene sets. (a... ) 5,893 human genes with homologous ... |
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Source: Zhang, Michael Q.- Watson School of Biological Sciences, Cold Spring Harbor Laboratory |
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Collection: Biotechnology |
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| 91 | BIOINFORMATICS Vol. 26 ISMB 2010, pages i158i167 | ||
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Summary: ) by integrating gene expression and transcription factor binding (ChIP-chip) data. Our model extends... existing methods. By combining gene expression and transcription factor binding (ChIP-chip) data... on the use of clustering methodologies, grouping genes on the basis of ... |
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Source: Edinburgh, University of - Division of Informatics, Institute for Adaptive and Neural Computation |
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Collection: Computer Technologies and Information Sciences |
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| 92 | Genome Biology 2004, 5:R74 commentreviewsreportsdepositedresearchrefereedresearchinteractionsinformation | ||
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Summary: isoform. Two clusters of sequence motifs enriched in the core sequences of A5Es in genes expressed... SE frequency group above - had the lowest level of A5Es and A3Es (less than 5% of genes in each... rankings of tissues remain similar. The ... |
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Source: Kreiman, Gabriel - Department of Ophthalmology and Neuroscience, Children's Hospital Boston, Harvard University; Poggio, Tomaso - Center for Biological and Computational Learning, Massachusetts Institute of Technology (MIT) |
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Collection: Biology and Medicine ; Computer Technologies and Information Sciences |
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| 93 | RESEARCH ARTICLE Open Access ProDiGe: Prioritization Of Disease Genes with | ||
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Summary: - tions, patterns of expression in different conditions, or interactions with other genes, and follows... a variety of information about the genes in the scoring function, including sequence features, expression... [7] nine sources of information about the genes, including ... |
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Source: Paris-Sud XI, Université de - Institut d'Optique, Laboratoire Charles-Fabry, Groupe d'Optique Atomique |
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Collection: Physics |
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| 94 | RESOVING THE GENE TREE AND SPECIES TREE PROBLEM BY PHYLOGENETIC MINING | ||
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Summary: is widely used in gene expression data processing, vector quantization, visualization and commercial... . Kaski, J. Venna, E. Castren, G. Wong. Analysis and visualization of gene expression data using self... RESOVING THE GENE TREE AND SPECIES TREE PROBLEM BY PHYLOGENETIC MINING XIAOXU HAN ... |
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|
Source: Wong, Limsoon - Department of Computational Science, National University of Singapore |
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Collection: Computer Technologies and Information Sciences |
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| 95 | Genome Biology 2006, 7:R126 commentreviewsreportsdepositedresearchrefereedresearchinteractionsinformation | ||
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Summary: regulatory control. For many of these genes, restricted anatomical expression in ciliated cells was confirmed... expression (SAGE) on ciliated and non-ciliated cell types in C. elegans and searched for genes with a 1... approaches used to identify new ciliary genes include microarray ... |
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Source: Swoboda, Peter - Department of Biosciences, Karolinska Institute |
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Collection: Biology and Medicine |
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| 96 | Correlated Discretized Expression Score: A Method for Identifying Gene Interaction Networks from Time Course Microarray | ||
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Summary: Correlated Discretized Expression Score: A Method for Identifying Gene Interaction Networks from... -- One of the goals of genomic expression analysis is to construct gene interaction networks from... the expression of a regulator and its effect on the expression of ... |
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Source: Dai, Yang - Department of Bioengineering, University of Illinois at Chicago |
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Collection: Engineering ; Biotechnology |
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| 97 | Seminar Series Matthew L. Robison | ||
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Summary: to identify genes that are differentially expressed in the marine diatom, T. pseudonana, during conditions... of silica starvation in an attempt to identify genes involved in the cell wall synthesis process. Thirteen... genes were identified as repressed and forty-two genes were ... |
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Source: Payseur, Bret - Department of Medical Genetics, University of Wisconsin at Madison |
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Collection: Biology and Medicine |
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| 98 | PLoS Biology | www.plosbiology.org 0001 In humanpathogen encounters,the battle for advantage | ||
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Summary: out at the level of gene expression.Hosts will stand a better chance of surviving if their genes... parasite interactions shape the changes in gene expression that alter an organism's ability to induce or resist... infection.They find that gene ... |
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Source: Otto, Sarah - Department of Zoology, University of British Columbia |
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Collection: Environmental Sciences and Ecology |
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| 99 | ProDiGe: PRioritization Of Disease Genes with multitask machine learning from positive and unlabeled examples | ||
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Summary: information we have about the genes, e.g., their biological functions, patterns of expression in different... of information about the genes in the scoring function, including sequence features, expression levels... of information about the genes, including ... |
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|
Source: Ecole Polytechnique, Centre de mathématiques |
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Collection: Mathematics |
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| 100 | Gene/protein/family name recognition in biomedical literature Asako Koike 1,2 | ||
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Summary: alpha, 14 3 3alpha, 14 3 3 a, 14 3 3a". (5) Common words at the end of gene names, such as "protein... problem is caused by ambiguous expression of the gene name in the text. The problems of multi-sense words... -3-3 alpha, beta, delta, gamma" gene name ... |
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|
Source: Association for Computational Linguistics (ACL) Anthology |
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Collection: Computer Technologies and Information Sciences |
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