| Sample search results for: a-madman annotation-based microarray |
| 1 | A sequence-oriented comparison of gene expression measurements across different hybridization-based | ||
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Summary: compared to annotation-based matches. Generally, consistency was good for highly expressed genes... - tary Table 1c online. Mapping of genes across platforms. Gene mapping was conducted using annotation-based... and sequence-based approaches. For the annotation-based approach, MatchMiner47 was used to map UniGene (UG |
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Source: Church, George M. - Wyss Institute for Biologically Inspired Engineering & Department of Genetics, Harvard University |
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Collection: Biotechnology |
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| 2 | BioMed Central Page 1 of 9 | ||
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Summary: annotations based on NCI-T also ena- bles formulation of queries (by browsing) to pose requests such as: 1... Software Annotation and query of tissue microarray data using the NCI Thesaurus Nigam H Shah*1, Daniel L Rubin1, Inigo... - musen@stanford.edu * Corresponding author Abstract Background: The Stanford Tissue ... |
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Source: Rubin, Daniel L. - Department of Radiology, Stanford University |
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Collection: Biology and Medicine |
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| 3 | Animal Science 890 Section 3 Design and analysis of microarray gene expression experiments | ||
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Summary: Animal Science 890 Section 3 Design and analysis of microarray gene expression experiments Fall... relevant to gene expression data with an emphasis on cDNA microarray experiments. COURSE CONTENT... : Introduction to microarray technology · Basic introduction · Sources of variability o Affymetrix microarrays ... |
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Source: Rosa, Guilherme J. M. - Departments of Dairy Science & Biostatistics and Medical Informatics, University of Wisconsin at Madison |
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Collection: Mathematics |
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| 4 | BioMed Central Page 1 of 6 | ||
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Summary: for Affymetrix human GeneChips, based on the information contained in the GeneAnnot database. GeneAnnot-based... : GeneAnnot-based custom CDFs solve the problem of a reliable reconstruction of expression levels... themselves if considered singularly. GeneAnnot based CDFs are provided with libraries compliant |
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Source: Lancet, Doron - Department of Molecular Genetics, Weizmann Institute of Science |
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Collection: Biology and Medicine |
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| 5 | Ontology-driven Indexing of Public Datasets for Translational Bioinformatics Nigam H. Shah, Clement Jonquet, Annie P. Chiang, Atul J. Butte, Rong Chen and Mark A. | ||
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Summary: _a retroperitoneal neoplasms. Creation of annotations based on transitive closure step is done offline because... repositories. We have previously developed methods to map text-annotations of tissue microarrays to concepts... and integration of tissue and gene expression microarray data. We enable ... |
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Source: Ecole Polytechnique, Centre de mathématiques |
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Collection: Mathematics |
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| 6 | EDGE: A Centralized Resource for the Comparison, Analysis, and Distribution of Toxicogenomic Information | ||
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Summary: microarray was annotated based on the sequence verifications of the PCR products. These sequence... Bank databases. These clones were then hand- annotated based on the homology of these clones to the databases... Transcriptional profiling via microarrays holds great ... |
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Source: Bradfield, Christopher A. - McArdle Laboratory for Cancer , University of Wisconsin at Madison; Craven, Mark - Departments of Biostatistics and Medical Informatics & Computer Sciences, University of Wisconsin at Madison |
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Collection: Biology and Medicine ; Computer Technologies and Information Sciences |
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| 7 | IEEE/ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS 1 High Confidence Rule Mining for | ||
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Summary: GO annotations. Based on this, we evaluated the rules we identify using GOstat [21], a web... for Microarray Analysis Tara McIntosh, Sanjay Chawla T. McIntosh and S. Chawla are with The School of Information... from microarray datasets. Microarray datasets typically contain an order of ... |
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Source: Chawla, Sanjay - School of Information Technologies, University of Sydney |
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Collection: Computer Technologies and Information Sciences |
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| 8 | Data Mining Techniques for Microarray Datasets Lei Liu Jiong Yang Anthony K. H. Tung | ||
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Summary: Data Mining Techniques for Microarray Datasets Lei Liu Jiong Yang Anthony K. H. Tung U. of Illinois... @eecs.cwru.edu atung@comp.nus.edu.sg Development in microarray technology has result in revolutionary changes... in biological research. Using microarrays, the expression level for thousands of genes can be monitored |
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Source: Yang, Jiong - Department of Electrical Engineering and Computer Sciences, Case Western Reserve University |
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Collection: Computer Technologies and Information Sciences |
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| 9 | Annals of Biomedical Engineering, Vol. 33, No. 6, June 2005 ( 2005) p. 866 DOI: 10.1007/s10439-005-4499-3 | ||
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Summary: -005-4499-3 Book Review Microarray Quality Control. By W. Zhang, I. Shmule- vich, and J. Astola, John Wiley... , Hoboken, New Jersey, 2004, 136 pages, Hardcover, ISBN: 0471453447 "Microarray Quality Control... in microarray experiments, starting from the preparation of biological samples and conclud- ing with the data |
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Source: Shmulevich, Ilya - Department of Bioengineering, University of Washington at Seattle |
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Collection: Biotechnology ; Biology and Medicine |
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| 10 | COMPUTATIONAL BIOMEDICINE: A MULTIDISCIPLINARY CROSSROADS | ||
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Summary: biologische en genetische processen experimenteel te monitoren (`DNA chips', microarrays,...); Ons... ......................................................................................................................33 III. Microarrays in oncology: from disease management to fundamental research ........34 III.1... . ... |
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Source: Leuven, Katholieke Universiteit, Department of Electrical Engineering, SCD Division |
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Collection: Engineering |
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| 11 | Lecture 2: Microarrays Central dogma of molecular biology: The state of a cell at any given time is governed | ||
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Summary: Lecture 2: Microarrays Central dogma of molecular biology: The state of a cell at any given time... to study with current technology. - DNA microarrays: technology for studying mRNA levels. - Monitoring... corresponds to a single gene. #12;Typical DNA microarray experiment: 1. Take a small glass slide (chip). 2 |
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Source: Cabrera, Javier - Department of Statistics, Rutgers University |
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Collection: Biology and Medicine ; Mathematics |
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| 12 | DNA microarray (spot) . | ||
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Summary: 1. DNA microarray DNA (spot) . DNA probe , probe (hybridization... ) . DNA microarray cDNA oligonucleotide oligonucleotide cDNA probe . oligonucleotide... microarray , DNA , probe . oligonucleotide microarray ... |
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Source: Zhang, Byoung-Tak - School of Computer Science and Engineering, Seoul National University |
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Collection: Computer Technologies and Information Sciences ; Biology and Medicine |
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| 13 | 1. What is a microarray? 2. Describe one use of a microarray. | ||
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Summary: 1. What is a microarray? 2. Describe one use of a microarray. 3. Dr. Flora is studying the effects... a soybean gene microarray: Circle the dots for gene sequences that do not show a difference in gene... WHY you chose these gene sequences. Put the following microarray technology steps in order. Write |
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Source: Campbell, A. Malcolm - Biology Department, Davidson College |
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Collection: Multidisciplinary Databases and Resources ; Biology and Medicine |
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| 14 | Evanescent-imaging-ellipsometry-based microarray Srivatsa Venkatasubbarao | ||
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Summary: Evanescent-imaging-ellipsometry-based microarray reader Srivatsa Venkatasubbarao Intelligent... -less ellipsometric imaging microarray reader. The ability of the ellipsometric microarray reader to measure binding... of sample to microarray surface is verified using oligonucleotide complementary DNA cDNA ... |
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Source: Chipman, Russell - College of Optical Science, University of Arizona |
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Collection: Engineering |
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| 15 | 16:960:690:02 -#35086 Special Topics: Exploration and Analysis of DNA Microarray and Protein Array Data | ||
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Summary: 16:960:690:02 - #35086 Special Topics: Exploration and Analysis of DNA Microarray and Protein Array... . Amaratunga J. Cabrera. Exploration and Analysis of DNA. Microarray and Protein Array Data. Wiley 2003. (The... . The role of genomics in biomedical research. Proteins. 3. Microarray Exeriments. Types of ... |
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Source: Cabrera, Javier - Department of Statistics, Rutgers University |
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Collection: Biology and Medicine ; Mathematics |
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| 16 | NHGRIfactsheet DNA Microarray Technology | ||
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Summary: NHGRIfactsheet DNA Microarray Technology What is DNA microarray technology? Although all... genes at once. With the development of DNA microarray technology, however, scientists can now examine... between individual genes. How does microarray work? Microarray is based on a database of ... |
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Source: Nguyen, Danh - Department of Public Health Sciences, University of California, Davis |
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Collection: Biology and Medicine ; Mathematics |
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| 17 | Systematic Planning of Genome-Scale Experiments in Poorly Studied Species | ||
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Summary: in a poorly studied species for functional annotation based on existing knowledge in a well characterized... for functional annotation based on related model organisms or other well- studied species. To further validate... microarray data compendium. In silico evaluations estimate that ... |
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Source: Dunham, Maitreya - Department of Genome Sciences, University of Washington at Seattle |
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Collection: Biology and Medicine ; Biotechnology |
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| 18 | Microarray Datenanalyse Kapitel 1: Einfhrung, Normalisierung, | ||
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Summary: Vorlesung Microarray Datenanalyse Kapitel 1: Einführung, Normalisierung, Differentielle Gene... , Multiples Testen Kapitel 2: Clustering und Klassifikation #12; Vorlesung: Microarray Datenanalyse... : Microarray Datenanalyse Kapitel 2 ............ ... ... ... ... i k i=1,...,n Proben k=1,...p Gene |
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Source: Spang, Rainer - Computational Molecular Biology Group, Max-Planck-Institut für molekulare Genetik |
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Collection: Computer Technologies and Information Sciences ; Biotechnology ; Biology and Medicine |
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| 19 | Classification by Nearest Shrunken Centroids | ||
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Summary: microarray analysis 2005 1 #12;Two roads to classification 1. model class probabilities QDA, LDA, ... 2... by SVM and PAM, Practical Microarray Analysis 2004 2 #12;What's the problem? In classification you have... , Practical Microarray Analysis 2004 3 #12;Discriminant analysis and gene selection Florian Markowetz |
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Source: Spang, Rainer - Computational Molecular Biology Group, Max-Planck-Institut für molekulare Genetik |
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Collection: Computer Technologies and Information Sciences ; Biotechnology ; Biology and Medicine |
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| 20 | BIOINFORMATICS APPLICATIONS NOTE Vol. 21 no. 11 2005, pages 27892790 | ||
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Summary: Summary: MADE4, microarray ade4, is a software package that facilitates multivariate analysis... of microarray gene-expression data. MADE4 accepts a wide variety of gene-expression data formats. MADE4 takes... these for application to microarray data. In addition, MADE4 provides new graphical and visualization tools that aid |
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Source: Thioulouse, Jean - University Lyon 1 |
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Collection: Environmental Sciences and Ecology |
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| 21 | Hughes,T. R.,Marton,M. J.,Jones, A.R.,Roberts,C. J.,Stoughton,R.,Armour,C. D.,Bennett, H. A., Coffey, E., Dai, H., He, Y. D., Kidd, M. J., King, A. M., Meyer, M. R., Slade, D., Lum, | ||
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Summary: , 807814. [15] Extrapolating Traditional DNA Microarray Statistics to Tiling and Protein Microarray... ZHU, MICHAEL SNYDER, and MARK B. GERSTEIN Abstract A credit to microarray technology is its broad... application. Two experi- ments--the tiling microarray experiment and the protein ... |
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Source: Yu, Haiyuan - Department of Biological Statistics and Computational Biology, Cornell University |
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Collection: Biology and Medicine ; Biotechnology |
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| 22 | 06s2: BINF1001 Bioinformatics 1 Clustering Microarray Data | ||
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Summary: 06s2: BINF1001 Bioinformatics 1 Clustering Microarray Data September 6, 2006 #12;Aims This lecture... will introduce you to microarray data and clustering methods that can be applied to discover patterns of gene... , Chapter 10, pp 519 ff] BINF1001: September 6, 2006 Clustering Microarray Data: Slide 1 #12;Introduction |
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Source: Bain, Mike - School of Computer Science and Engineering, University of New South Wales |
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Collection: Computer Technologies and Information Sciences |
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| 23 | Classification by Nearest Shrunken Centroids | ||
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Summary: Diagnostics Group Berlin Practical DNA microarray analysis 2004 1 #12;Two roads to classification 1. model... , SVM Florian Markowetz, Classification by SVM and PAM, Practical Microarray Analysis 2004 2 #12;What... , Classification by SVM and PAM, Practical Microarray Analysis 2004 3 #12;Discriminant analysis and gene selection |
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Source: Spang, Rainer - Computational Molecular Biology Group, Max-Planck-Institut für molekulare Genetik |
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Collection: Computer Technologies and Information Sciences ; Biotechnology ; Biology and Medicine |
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| 24 | This Provisional PDF corresponds to the article as it appeared upon acceptance. Fully formatted PDF and full text (HTML) versions will be made available soon. | ||
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Summary: to prioritize the Prosecutor results. For some organisms, functional annotations based on curated knowledge... with functional annotations based on curated regulatory network information from RegulonDB [30]. The results 6 #12... function for prokaryotes using DNA microarray data, genomic ... |
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Source: Breitling, Rainer - Groningen Bioinformatics Centre, Rijksuniversiteit Groningen |
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Collection: Biology and Medicine ; Biotechnology |
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| 25 | Microarrays onMicroarrays onMicroarrays onMicroarrays onMicroarrays onMicroarrays onMicroarrays onMicroarrays on plantsplantsplantsplantsplantsplantsplantsplants | ||
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Summary: Microarrays onMicroarrays onMicroarrays onMicroarrays onMicroarrays onMicroarrays onMicroarrays onMicroarrays... are hybridized to gene probes on microarray slides, and the slides are scanned. Images of the ... |
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Source: Bones, Atle M. - Institutt for biologi, Norwegian University of Science and Technology |
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Collection: Biology and Medicine |
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| 26 | Int J Software Informatics, Vol.2, No.2, December 2008, pp. 215231 E-mail: ijsi@iscas.ac.cn International Journal of Software and Informatics, ISSN 1673-7288 http://www.ijsi.org | ||
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Summary: two conditions are similar and the expression levels of two genes are correlated. Annotation-based... knowledge 221 depend mainly on the availability and completeness of the annotation bases. 3.3 Pattern... of thousands of genes in par- allel. These include hybridization-based technologies, such as DNA ... |
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Source: Ecole Polytechnique, Centre de mathématiques |
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Collection: Mathematics |
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| 27 | Approaches and Milestones: Objective 1: Identify innovative technologies. | ||
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Summary: a literature review of qPCR, microarray, microfluidics and lab-on-a-chip technologies to understand the state... PCR, microarray, microfluidics and lab-on-a-chip technologies for waterborne pathogen detection and/or monitoring... qPCR, microarray, microfluidics and lab-on-a-chip, which could be used for waterborne pathogen |
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Source: Environmental Protection Agency, Technology Innovation Program (TIP) |
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Collection: Multidisciplinary Databases and Resources ; Environmental Management and Restoration Technologies |
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| 28 | Appendix A: Microarray Methodology Overview DNA microarrays allow an investigator to measure simultaneously the relative activity | ||
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Summary: Appendix A: Microarray Methodology Overview DNA microarrays allow an investigator to measure... simultaneously the relative activity of every gene in a genome. A microarray consists of a glass slide with DNA... . The single-stranded DNA printed on the microarray is the target bound by fluorescently labeled ... |
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Source: Campbell, A. Malcolm - Biology Department, Davidson College |
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Collection: Multidisciplinary Databases and Resources ; Biology and Medicine |
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| 29 | Archana Rao Graduate Student | ||
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Summary: Preliminary Examination "Assessment of microarray immobilization and capture using TOF-SIMS (time... -of-flight secondary ion mass spectrometry)" Microarray technology facilitates high-throughput, parallel and semi... -quantitative assessment of analyte abundance relevant to many useful applications. DNA microarrays have been ... |
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Source: Simons, Jack - Department of Chemistry, University of Utah |
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Collection: Chemistry |
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| 30 | FRS Win 2008 D. Nguyen Assignment # 3: Please provide answers to the following questions for the reading assignment: "Viral | ||
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Summary: for the reading assignment: "Viral discovery and sequence recovery using DNA microarrays" Reading: Read abstract... that a previous version of a microarray that they developed contained 1,6000 oligo's from 140 viruses. (a) Why... are they spotting/placing these sequences from so many different viruses (140 of them)? (b) On the new ... |
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Source: Nguyen, Danh - Department of Public Health Sciences, University of California, Davis |
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Collection: Biology and Medicine ; Mathematics |
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| 31 | Genome Analysis Genome-Wide ORFeome Cloning and Analysis | ||
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Summary: clones matched to the existing cDNA sequences or gene annotation based on single read sequencing from... distinct Arabidopsis organ types and the cultured cells was profiled using a 70-mer oligo microarray... ; Riechmann, 2002). In these regards, microarray profiling has become an important approach to ... |
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Source: Deng, Xing-Wang - Department of Molecular Biophysics and Biochemistry, Yale University |
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Collection: Biology and Medicine ; Biotechnology |
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| 32 | Classification by Support Vector Machines Florian Markowetz | ||
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Summary: Genetics Computational Molecular Biology Berlin Practical DNA Microarray Analysis 2004 1 #12;Overview I... , Classification by SVM, Practical DNA Microarray Analysis 2004 2 #12;Supervised Learning Calvin, I'm still... by SVM, Practical DNA Microarray Analysis 2004 3 #12;Unsupervised Learning Calvin, I'm still confused |
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Source: Spang, Rainer - Computational Molecular Biology Group, Max-Planck-Institut für molekulare Genetik |
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Collection: Computer Technologies and Information Sciences ; Biotechnology ; Biology and Medicine |
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| 33 | Classification by Support Vector Machines Florian Markowetz | ||
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Summary: Genetics Computational Molecular Biology Berlin Practical DNA Microarray Analysis 2003 1 #12;Overview I... , Classification by SVM, Practical DNA Microarray Analysis 2003 2 #12;Supervised Learning Calvin, I'm still... by SVM, Practical DNA Microarray Analysis 2003 3 #12;Unsupervised Learning Calvin, I'm still confused |
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Source: Spang, Rainer - Computational Molecular Biology Group, Max-Planck-Institut für molekulare Genetik |
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Collection: Computer Technologies and Information Sciences ; Biotechnology ; Biology and Medicine |
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| 34 | Interactive Semisupervised Learning for Microarray Analysis | ||
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Summary: Interactive Semisupervised Learning for Microarray Analysis Yijuan Lu, Qi Tian, Feng Liu, Maribel... Sanchez, and Yufeng Wang Abstract--Microarray technology has generated vast amounts of gene expression... patterns in microarray data. However, the discrepancy between the rich expression profiles and the limited |
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Source: Texas at San Antonio, University of - Division of Computer Science |
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Collection: Computer Technologies and Information Sciences |
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| 35 | Jean Yee Hwa Yang School of Mathematics and Statistics, | ||
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Summary: DNA microarrays. Student Researcher, Fall 1999, 2000 and 2001. Genetics and Bioinformatics Group, Walter and Eliza... DNA microarray experiment. Committee: Terence P. Speed, Chair; David A. Freedman; John Ngai. M.A. in Statistics... Normalization of Two-Channel Spotted Microarrays. Statistical Applications in Genetics and ... |
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Source: Yang, Yee Hwa - School of Mathematics and Statistics, University of Sydney |
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Collection: Mathematics ; Biotechnology |
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| 36 | Extrapolating Traditional DNA Microarray Statistics to the Tiling and Protein Microarray | ||
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Summary: Extrapolating Traditional DNA Microarray Statistics to the Tiling and Protein Microarray... Haven, CT 06520, USA Abstract A credit to the microarray technology is its broad application. Two... experiments - the tiling microarray experiment, and the protein microarray experiment are exem- ... |
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Source: Gerstein, Mark - Department of Molecular Biophysics and Biochemistry, Yale University |
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Collection: Biology and Medicine ; Biotechnology |
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| 37 | Navigation through Structured Microarray Analysis towards | ||
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Summary: Navigation through Structured Microarray Analysis towards Clarified Diagnosis JulieJulie Floch... /26Navigation through Structured Microarray Analysis towards Clarified Diagnosis OVERVIEWOVERVIEW zz I... ;26/05/03 4/26Navigation through Structured Microarray Analysis towards Clarified Diagnosis zz Observation |
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Source: Spang, Rainer - Computational Molecular Biology Group, Max-Planck-Institut für molekulare Genetik |
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Collection: Computer Technologies and Information Sciences ; Biotechnology ; Biology and Medicine |
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| 38 | Copyright 2007 by the Genetics Society of America DOI: 10.1534/genetics.106.066472 | ||
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Summary: to provide a functional annotation based on nucleic acid sequence identity and/or amino acid sequence... annotation of maize genes and the analysis of their microarray expression patterns. We have created... students can make meaningful contributions to the functional annotation and analysis of microarray |
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Source: Schnable, Patrick S. - Center for Plant Genomics & Department of Genetics, Development and Cell Biology, Iowa State University |
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Collection: Biology and Medicine ; Biotechnology |
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| 39 | Progress of Princeton Project: Content-Based Similarity Search with MyLifeBits | ||
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Summary: be consulted with exceeding speed and flexibility" Attribute/annotation-based approach Useful, but have... limitations Our approach Content-based similarity search capability Work together with · Attribute/annotation-based... Image similarity search benchmark Data types Images, audio, video, 3D-shapes, genomic microarray #12 |
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Source: Narasayya, Vivek - Data Management, Exploration and Mining Group, Microsoft Research |
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Collection: Computer Technologies and Information Sciences |
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| 40 | Detection of biomolecular microarrays without fluorescent-labeling agents J. P. Landrya | ||
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Summary: Detection of biomolecular microarrays without fluorescent-labeling agents J. P. Landrya , X. D... -RD) scanning microscope for imaging microarrays of label-free protein and DNA. Such a microscope complements... ) detect binding reactions on microarrays without labeling, 2) quantitatively measure the optical |
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Source: Zhu, Xiangdong - Department of Physics, University of California, Davis |
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Collection: Materials Science ; Physics |
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| 41 | A T C T G A T C C T T C T G A A C G G A A C T A A T T T C A A G A A T C T G A T C C T T G A A C T A C C T T C C A A G G T G | ||
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Summary: S New Stringent Two-Color Gene Expression Workflow Enables More Accurate and Reproducible Microarray... in the development and optimization of robust microarray processing protocols. New product lines are being developed... to optimize processes associated with microarray analysis such as sample labeling, hybridization, wash |
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Source: Birmingham, University of - School of Psychology, Sensory Motor Neuroscience Centre |
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Collection: Biology and Medicine |
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| 42 | Proceedings of the ECCB'2003, page 1315 Modular Decision System and Information Integration for Improved | ||
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Summary: . This may not be surprising, since microarrays are restricted to measuring the RNA abundance within cells... . Many important posttranslational events may not be reflected in microarray measurements. To exploit... the full power of microarray techniques for medical applications, it will be necessary to integrate |
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Source: Futschik, Matthias E. - FachInstitut Theoretische Biologie, Humboldt-Universität zu Berlin |
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Collection: Biology and Medicine |
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| 43 | Proceedings of the ECCB'2003, page 13-15 Modular Decision System and Information Integration for Improved | ||
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Summary: . This may not be surprising, since microarrays are restricted to measuring the RNA abundance within cells... . Many important post-translational events may not be reflected in microarray measurements. To exploit... the full power of microarray techniques for medical applications, it will be necessary to integrate |
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Source: Futschik, Matthias E. - FachInstitut Theoretische Biologie, Humboldt-Universität zu Berlin |
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Collection: Biology and Medicine |
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| 44 | Vol. 23 ISMB/ECCB 2007, pages i222i229 BIOINFORMATICS doi:10.1093/bioinformatics/btm222 | ||
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Summary: that effectively captures characteristics of a gene's local functional environment. Function annotations based... of a gene's local functional environment. Functional annotations based on this statistic are then assessed... , Berkeley, CA, USA ABSTRACT Motivation: The rapid accumulation of ... |
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Source: Zhou, Xianghong Jasmine - Department of Biological Sciences, University of Southern California |
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Collection: Biotechnology ; Biology and Medicine |
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| 45 | Classification by Support Vector Machines Florian Markowetz | ||
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Summary: Genetics Computational Molecular Biology Berlin Practical DNA Microarray Analysis 2003 1 #12;Overview I... , Classification by SVM, Practical DNA Microarray Analysis 2003 2 #12;Supervised learning Calvin, I'm still... by SVM, Practical DNA Microarray Analysis 2003 3 #12;Supervised learning Calvin, I'm still confused about |
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Source: Spang, Rainer - Computational Molecular Biology Group, Max-Planck-Institut für molekulare Genetik |
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Collection: Computer Technologies and Information Sciences ; Biotechnology ; Biology and Medicine |
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| 46 | 80 Rice is life: scientific perspectives for the 21st century system, random overexpression of the Arabidopsis full-length | ||
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Summary: in Nipponbare, which would make annotations based on Nipponbare sequence data impossible. Gene-specific primers... integrative approaches cen- tered on whole-genome nucleotide tiling-path microarray and array-guided full... 81 Fig. 1. A proposed workflow for using tiling microarray to improve rice genome ... |
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Source: Deng, Xing-Wang - Department of Molecular Biophysics and Biochemistry, Yale University; National Institute of Biological Sciences, Beijing |
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Collection: Biology and Medicine ; Biotechnology |
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| 47 | Predicting Microarray Signals by Physical Modeling | ||
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Summary: Predicting Microarray Signals by Physical Modeling Josh Deutsch University of California Santa Cruz... Predicting Microarray Signals by Physical Modeling p.1/39 #12;Collaborators Shoudan Liang NASA Ames Onuttom... Narayan UCSC Predicting Microarray Signals by Physical Modeling p.2/39 #12;Outline Background Gene |
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Source: Deutsch, Josh - Physics Department, University of California at Santa Cruz |
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Collection: Physics |
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| 48 | Full Genome Microarrays Data Analysis | ||
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Summary: Goals Full Genome Microarrays Data Analysis Bioinformatics RNA-free Teaching Chips H e l p i n g... S t u d e n 1Biology & 2Math Depts., Davidson College, Davidson, NC Bar Code MicroarraysGCAT macampbell... @davidson.edu www.bio.davidson.edu/campbell 1 2 3 4 5 6 7 8 9 MicroArray Genome Imaging & Clustering Tool www |
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Source: Campbell, A. Malcolm - Biology Department, Davidson College |
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Collection: Multidisciplinary Databases and Resources ; Biology and Medicine |
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| 49 | Visualization of Gene Combinations Christian Tominski & Heidrun Schumann | ||
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Summary: · Microarrays are fundamental technology · Huge volumes of microarray data collected: Gene Expression Omnibus... of these data? #12;Background · Microarray data analysis involves many intricate steps Digitalization... Significance Analysis Self-Organizing Maps #12;Background · Microarray data Set of ... |
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Source: Tominski, Christian - Institut für Informatik, Universität Rostock |
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Collection: Computer Technologies and Information Sciences |
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| 50 | By: Julie Ramirez Andrea DeFelice | ||
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Summary: for type 2 diabetes. #12;Why use a microarray? · Useful tool for the better understanding of insulin... -regulated diabetes-related diseases. · Using a microarray will lead to a better understanding of the origin... intervention and treatment options. #12;Why a Reverse Microarray? · This will help scientists have a better |
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Source: Nguyen, Danh - Department of Public Health Sciences, University of California, Davis |
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Collection: Biology and Medicine ; Mathematics |
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| 51 | Microarray Platform for Profiling Enzyme Activities in Complex Proteomes Stephan A. Sieber, Tony S. Mondala, Steven R. Head, and Benjamin F. Cravatt* | ||
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Summary: Microarray Platform for Profiling Enzyme Activities in Complex Proteomes Stephan A. Sieber, Tony S... at the expense of throughput and sample conservation. Here, we report a microarray platform for ABPP... that overcomes many of the technical limitations of both gel- and LC-MS-based methods. A microarray version |
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Source: Cravatt, Benjamin - Department of Cell Biology, Scripps Research Institute |
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Collection: Biology and Medicine |
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| 52 | 1R01-GM072619-01: "Optimization of oligonucleotide array design" PI: Dr. Cynthia Gibas, UNCC | ||
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Summary: -PI: Dr. Jennifer W. Weller GMU High-quality, quantitative microarrays are an absolute requirement... validated solution hybridization parameters into the processes of microarray design and microarray data... with established microarray data analysis procedures. The predictive models that we develop can be ... |
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Source: Weller, Jennifer Walsh - Bioinformatics Program, University of North Carolina at Charlotte |
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Collection: Computer Technologies and Information Sciences ; Biotechnology |
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| 53 | FRS D. Nguyen SARS article | ||
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Summary: sequence. In the article the authors stated that a previous version of a microarray that they developed... different viruses (140 of them)? (b) On the new microarray that they are reporting in this paper... does this mean? (c) Describe the new microarray in terms of how many oligo's there are per virus |
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Source: Nguyen, Danh - Department of Public Health Sciences, University of California, Davis |
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Collection: Biology and Medicine ; Mathematics |
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| 54 | Microarray experiments: New statistical tools facilitate biological interpretation | ||
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Summary: annotation (based on keywords, GeneOntologies, genomic location,...) Open analysis, no pre-defined cutoff... Microarray experiments: New statistical tools facilitate biological interpretation Rainer Breitling... .herzyk}@bio.gla.ac.uk BRC Abstract After data collection, biologists analysing a microarray ... |
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Source: Breitling, Rainer - Groningen Bioinformatics Centre, Rijksuniversiteit Groningen |
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Collection: Biology and Medicine ; Biotechnology |
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| 55 | Robotic spotting of cDNA and oligonucleotide microarrays | ||
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Summary: Robotic spotting of cDNA and oligonucleotide microarrays Richard P. Auburn1 , David P. Kreil1... Laboratory, Dept of Physics, University of Cambridge, Madingley Road, Cambridge CB3 0HE, UK DNA microarrays... to their flexibility and value, mechanically spotted microarrays remain the most popular platform. Here, we review |
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Source: Kreil, David - Inference Group, Cavendish Laboratory, University of Cambridge |
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Collection: Physics |
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| 56 | Classification by Support Vector Machines Florian Markowetz | ||
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Summary: Genetics Computational Molecular Biology Berlin Practical DNA Microarray Analysis 2003 1 #12;Overview I... by SVM, Practical DNA Microarray Analysis 2003 2 #12;Learning from examples Gene expression is a complex... } Diagnosis = fX (new patient) Florian Markowetz, Classification by SVM, Practical DNA Microarray Analysis |
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Source: Spang, Rainer - Computational Molecular Biology Group, Max-Planck-Institut für molekulare Genetik |
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Collection: Computer Technologies and Information Sciences ; Biotechnology ; Biology and Medicine |
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| 57 | An open letter on microarray data from the MGED Society | ||
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Summary: An open letter on microarray data from the MGED Society A fundamental principle guiding... ) and National Center for Biotechnology Information (NCBI). Similarly, we, members of the Microarray Gene... now require the submission of microarray data to public repositories as part of the process |
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Source: Sherlock, Gavin - Department of Genetics, Stanford University |
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Collection: Biology and Medicine |
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| 58 | An open letter on microarray data from the MGED Society A fundamental principle guiding the | ||
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Summary: An open letter on microarray data from the MGED Society A fundamental principle guiding... ) and National Center for Biotechnology Information (NCBI). Similarly, we, members of the Microarray Gene... now require the submission of microarray data to public repositories as part of the process |
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Source: Sherlock, Gavin - Department of Genetics, Stanford University |
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Collection: Biology and Medicine |
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| 59 | BioMed Central Page 1 of 12 | ||
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Summary: Research article Autocorrelation analysis reveals widespread spatial biases in microarray experiments Amnon Koren1... .tirosh@weizmann.ac.il; Naama Barkai* - naama.barkai@weizmann.ac.il * Corresponding author Abstract Background: DNA microarrays... research. However, the microarray technology suffers from various forms of biases ... |
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Source: Barkai, Naama - Departments of Molecular Genetics & Physics of Complex Systems, Weizmann Institute of Science |
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Collection: Biotechnology |
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| 60 | Population genomics of drug resistance in Candida albicans | ||
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Summary: values, S. cerevisiae homologues, Blast-E values, and annotation based on C. albicans (http: alces... microarrays. In contrast to other microarray-based studies of gene expression in yeasts that have focused... in the microarray experiments (ADH4, MDR1, YPL88, YPX98, YPR127W, GRE99, ... |
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Source: Anderson, James B. - Department of Ecology and Evolutionary Biology, University of Toronto; Kohn, Linda M. - Department of Ecology and Evolutionary Biology, University of Toronto |
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Collection: Biology and Medicine ; Environmental Sciences and Ecology |
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| 61 | A CMOS Image Sensor for DNA Microarrays Samir Parikh, Glenn Gulak, Paul Chow | ||
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Summary: A CMOS Image Sensor for DNA Microarrays Samir Parikh, Glenn Gulak, Paul Chow University of Toronto... microarray scanner. The detection limit of 4590 fluorophores/µm2 is compared with 4.49 fluorophores/µm2... of a commercial photomultiplier-tube-based microarray scanner. The performance gap can be reduced by improving |
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Source: Chow, Paul - Department of Electrical and Computer Engineering, University of Toronto |
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Collection: Computer Technologies and Information Sciences ; Engineering |
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| 62 | Fabricating RNA Microarrays with RNA-DNA Surface Ligation Chemistry | ||
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Summary: Fabricating RNA Microarrays with RNA-DNA Surface Ligation Chemistry Hye Jin Lee, Alastair W. Wark... to create renewable RNA microarrays from single-stranded DNA (ssDNA) microar- rays on gold surfaces... of the ssRNA microarray in terms of (i) the hybridization adsorption of complementary DNA onto the RNA array |
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Source: Corn, Robert M.- Department of Chemistry, University of California, Irvine |
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Collection: Chemistry |
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| 63 | While conventional DNA and protein microarray technologies have been a boon to industrial and academic research,investigators interest- | ||
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Summary: #12;While conventional DNA and protein microarray technologies have been a boon to industrial... and microarray technology are beginning to address this need for novel biophysical methods in glycomics [Figure 1... and glycoconjugates [2]. It remains to be seen if a single platform will emerge as the standard for glycan microarray |
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Source: Ratner, Daniel M. - Department of Bioengineering, University of Washington at Seattle |
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Collection: Biology and Medicine ; Biotechnology |
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| 64 | Statistical Applications in Genetics and Molecular Biology | ||
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Summary: Concerns About Unreliable Data from Spotted cDNA Microarrays Due to Cross-Hybridization and Sequence Errors... ://www.bepress.com/sagmb #12;Concerns About Unreliable Data from Spotted cDNA Microarrays Due to Cross... concerns regarding the reliability of data generated by spotted cDNA microarrays. Two types of error we |
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Source: Murphy, Robert F. - Department of Biological Sciences & School of Computer Science, Carnegie Mellon University |
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Collection: Biology and Medicine ; Computer Technologies and Information Sciences |
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| 65 | 1359-6446/02/$ see front matter 2002 Elsevier Science Ltd. All rights reserved. PII: DDT Vol. 7, No. 18 (Suppl.), 2002 | ||
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Summary: such as transcriptional profiling [5], high-throughput mass spectrometry [6] and pro- tein microarrays [7] allow... to these methods, Ziauddin and colleagues have re- cently described a microarray-driven technique for the high... of cells over- expressing defined gene products. Such trans- fected cell microarrays (cell ... |
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Source: Sabatini, David M. - Whitehead Institute for Biomedical Research & Department of Biology, Massachusetts Institute of Technology (MIT) |
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Collection: Biology and Medicine |
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| 66 | DNA Microarrays revolutionized the field of genomics, enabling biologists to study thousands of genes simultaneously. In this monograph we | ||
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Summary: DNA Microarrays revolutionized the field of genomics, enabling biologists to study thousands... to restore the missing data on the DNA Microarrays, which was corrupted due to various factors. Second, how... -3-639-17994-1 Amir Niknejad Shmuel Friedland APPLICATIONS OF LINEAR ALGEBRA TO DNA MICROARRAYS IMPUTATION ALGORITHMS |
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Source: Friedland, Shmuel - Department of Mathematics, Statistics, and Computer Science, University of Illinois at Chicago |
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Collection: Mathematics |
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| 67 | The 7th International Meeting of the Microarray Gene Expression Data Society Modeling and Finding Gene Regulatory Network | ||
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Summary: The 7th International Meeting of the Microarray Gene Expression Data Society Modeling and Finding... network for im- proved gene regulatory network representation based on microarray gene expression data... by finding logical func- tions that best fit the graph of pathways. We are testing our ideas using microarray |
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Source: Song, Joe - Department of Computer Science, New Mexico State University |
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Collection: Computer Technologies and Information Sciences |
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| 68 | Suggested Reading 1. Pevsner, J, Bioinformatic Approaches to Ribonucleic Acid (RNA), in Bioinformatics and | ||
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Summary: . Pevsner, J, Gene Expression: Microarray Data Analysis, in Bioinformatics and Functional Genomics. 2009... with Microarrays Part II: Data Analysis. Hypothesis, 2007. 5(1): p. 15-22. 5. Kicic, A, et al., Decreased... Crit Care Med, 2010. 181(9): p. 889-98. 6. Smyth, GK, Limma: Linear Models for Microarray Data |
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Source: Gleeson, Joseph G. - Department of Neurosciences, University of California at San Diego |
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Collection: Biology and Medicine |
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| 69 | Seminar Series Mark E. Berres, Ph.D. | ||
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Summary: , Genetics/Biotechnology Center, 425 Henry Mall Luminescent Quantum Dot Bioconjugates and Microarray Assays... some of my work on using quantum dots as ultra-sensitive reporters for microarray experiments. Results... is readily achievable. Preliminary experiments with microarray feature detection with streptavidin |
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Source: Payseur, Bret - Department of Medical Genetics, University of Wisconsin at Madison |
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Collection: Biology and Medicine |
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| 70 | UNDERSTANDING THE GLOBAL PROPERTIES OF FUNCTIONALLY-RELATED GENE NETWORKS USING THE | ||
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Summary: -related genes using the annotations based on the Gene Ontology. We define two genes to be connected when... and cellular component. Our functionally-related gene networks are constructed from annotations based... are paired when they are found to be coexpressed in the microarray ... |
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Source: Dasgupta, Partha - Department of Computer Science and Engineering, Arizona State University |
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Collection: Computer Technologies and Information Sciences |
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| 71 | A Supervised Learning Approach to the Ensemble Clustering of Genes Andrew K. Rider1,3,4 | ||
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Summary: according to both annotation-based and interaction-based validation methods in UPGMA and Walktrap clusters... . E. coli GO annotation based validation Friedman's test results for the BHI were similar to the F... an ensemble similarity measure. The annotation-based validation in Figures 4 and 5 was similarly ... |
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Source: Chawla, Nitesh V. - Department of Computer Science and Engineering, University of Notre Dame |
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Collection: Computer Technologies and Information Sciences |
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| 72 | n June, Nick Fisher issued a dire-sounding warning. He is president of the Statistical | ||
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Summary: more thanglancingatanelectrophoreticgel. Over the past few years, microarrays, also known as DNA chips... . But there are no simple answers: interpreting microarray experiments is taxing the skills of even the most adept number... -crunchers. "It's a technical and esoteric topic,"says Paul Meltzer, a cancer geneticist and ... |
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Source: Rocke, David M. - Division of Biostatistics & Department of Applied Science, University of California, Davis |
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Collection: Computer Technologies and Information Sciences ; Biotechnology |
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| 73 | Microarrays and the shadows in Plato's cave | ||
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Summary: 11 Microarrays and the shadows in Plato's cave Matthias E. Futschik Institute for Theoretical... ? Microarray data analysis: The way out of the cave and the challenges that we are meeting. Introduction... to microarray techniques: Experimental background Types of microarrays Microarray ... |
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Source: Futschik, Matthias E. - FachInstitut Theoretische Biologie, Humboldt-Universität zu Berlin |
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Collection: Biology and Medicine |
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| 74 | ORNL 2010-G00616/jcn UT-B ID 200101009 | ||
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Summary: ORNL 2010-G00616/jcn UT-B ID 200101009 Automated Sampling for Microarray Readout Using Electrospray... Mass Spectrometry Technology Summary The growth of the microarray market has been limited by detection... are then transferred for analysis by mass spectroscopy. When this approach is applied to sampling protein microarrays |
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Source: Controlled Fusion Atomic Data Center (CFADC) |
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Collection: Plasma Physics and Fusion |
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| 75 | OAK RIDGE NATIONAL LABORATORY U. S. DEPARTMENT OF ENERGY | ||
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Summary: ) Multiple Design Criteria Improve Environmental Microarray Probe Selection and Specificity Contact: Chris... #12;OAK RIDGE NATIONAL LABORATORY U. S. DEPARTMENT OF ENERGY Microarrays are useful for environmental... . The gene probes on such microarrays have to be able to distinguish between thousands of closely related |
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Source: Oak Ridge National Laboratory Fossil Energy Program |
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Collection: Fossil Fuels |
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| 76 | CLIP-CHIPTM, a Dedicated Microarray of All Proteases and Inhibitors | ||
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Summary: CLIP-CHIPTM, a Dedicated Microarray of All Proteases and Inhibitors The CLIP-CHIP is a customized... 70mer oligonucleotide based microarray containing all human proteases (558) and inhibitors (157... , such as genes implicated in specific cancers, may be included in CLIP-CHIPTM microarrays. ·The CLIP |
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Source: Michelson, David G. - Department of Electrical and Computer Engineering, University of British Columbia |
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Collection: Engineering |
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| 77 | A 666 VOLUME 112 | NUMBER 12 | August 2004 Environmental Health Perspectives Microarray Data Standards | ||
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Summary: A 666 VOLUME 112 | NUMBER 12 | August 2004 · Environmental Health Perspectives Microarray Data... ), and the National Center for Biotechnology Information (NCBI). Similarly, we, the members of the Microarray Gene... should now require the submission of microarray data to public repositories as part of the process |
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|
Source: Sherlock, Gavin - Department of Genetics, Stanford University |
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Collection: Biology and Medicine |
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| 78 | Abstract--The up-to-date segmentation techniques and software programs for microarray image segmentation require | ||
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Summary: Abstract--The up-to-date segmentation techniques and software programs for microarray image... reached during microarray experiments. In this paper, an automatic approach for segmenting microarray... spots of various shapes and intensities. Index Terms -- Microarrays, Image Analysis, Segmentation I |
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Source: Athens, University of - Department of Informatics and Telecommunications, Real-Time Systems and Image Analysis Lab |
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Collection: Computer Technologies and Information Sciences |
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| 79 | TRENDS in Cell Biology Vol.12 No.10 October 2002 http://tcb.trends.com 0962-8924/02/$ see front matter 2002 Elsevier Science Ltd. All rights reserved. PII: S0962-8924(02)02354-1 | ||
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Summary: -throughput mass spectrometry [2] and protein microarrays [3] allow the rapid systemic quantitation of m... and Sabatini have recently described a novel cell-based microarray system for identifying the cellular... functions of gene products [4]. Such `cell microarrays'have features (`spots') that are clusters |
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Source: Sabatini, David M. - Whitehead Institute for Biomedical Research & Department of Biology, Massachusetts Institute of Technology (MIT) |
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Collection: Biology and Medicine |
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| 80 | Research article Dosage compensation is less effective in birds than in mammals | ||
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Summary: November 2006 Affymetrix annotations based on release 2.1 of the chicken genome [45]. Genes assigned... in the number of Z chromosomes. Results: Using microarray analysis, we compared the male:female ratio... first constructed a small cDNA microarray for the zebra finch with probes for A and Z genes |
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Source: McQueen, Heather - School of Biological Sciences, University of Edinburgh |
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Collection: Biology and Medicine |
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| 81 | INTRODUCTION ICROARRAY technology is the most powerful tool to | ||
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Summary: gene activities. Analysis of microarray genetic data has already allowed a better understanding... microarray data clustering can be summarised in the following steps: 1) Pre-processing. Since gene expression... coefficients for the microarray model. Then vector quantisation allows the clustering of the resultant |
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Source: Nebel, Jean-Christophe - School of Computing and Information Systems, Kingston University |
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Collection: Computer Technologies and Information Sciences |
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| 82 | A Precise and Automatic Gridding Approach to Noise-Affected and Distorted Microarray Images | ||
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Summary: A Precise and Automatic Gridding Approach to Noise-Affected and Distorted Microarray Images Eleni... -automatic approach to the determination of the grid alignment (Gridding) on microarray images is presented... as to images containing spots with various intensities. 1. Introduction Over the last decades, cDNA microarrays |
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Source: Athens, University of - Department of Informatics and Telecommunications, Real-Time Systems and Image Analysis Lab |
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Collection: Computer Technologies and Information Sciences |
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| 83 | It is only the beginning: Putting microarrays into context | ||
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Summary: 1 It is only the beginning: Putting microarrays into context Matthias E. Futschik Institute... Medical expert knowledgeknowledge MicroarraysMicroarraysDNADNA Chromosomal LocationChromosomal Location #12... et al, Science, 2001 · Study of yeast galactose-utilisation pathway · Use of microarrays, quantative |
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Source: Futschik, Matthias E. - FachInstitut Theoretische Biologie, Humboldt-Universität zu Berlin |
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Collection: Biology and Medicine |
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| 84 | Letter to the Editor Make Microarray Data with Known Ratios | ||
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Summary: Letter to the Editor Make Microarray Data with Known Ratios A. Malcolm Campbell,* William T... .bio.davidson.edu/projects/GCAT/Spot_synthe- sizer/Spot_synthesizer.html) that permits faculty to gener- ate simulated DNA microarray data for use... Risi et al. (1997), DNA microarrays have become an increasingly powerful and popular ... |
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|
Source: Campbell, A. Malcolm - Biology Department, Davidson College |
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Collection: Multidisciplinary Databases and Resources ; Biology and Medicine |
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| 85 | Introduction to DNA Microarray Technologies | ||
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Summary: Introduction to DNA Microarray Technologies Sandrine Dudoit, Robert Gentleman, Rafael Irizarry... · Basic principles · Spotted DNA microarrays · Affymetrix oligonucleotide chips #12;DNA microarrays #12... ;DNA microarrays DNA microarrays rely on the hybridization properties of nucleic ... |
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Source: Dai, Yang - Department of Bioengineering, University of Illinois at Chicago |
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Collection: Engineering ; Biotechnology |
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| 86 | An oligonucleotide microarray for microRNA expression analysis based on labeling RNA | ||
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Summary: An oligonucleotide microarray for microRNA expression analysis based on labeling RNA with quantum... RNAs. We report a novel miRNA profiling microarray, in which miRNAs were directly labeled at the 30... RNAs through streptavidinbiotin interac- tion. The detection limit of this microarray for miRNA was $0.4 fmol |
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Source: Tian, Weidong - Institute of Biochemistry and Cell Biology, Shanghai Institute of Biological Sciences |
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Collection: Biology and Medicine |
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| 87 | Proceedings of Student/Faculty Research Day, CSIS, Pace University, May 6th, 2005 Microarray Cancer Data Visualization: A Comparative Study | ||
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Summary: Proceedings of Student/Faculty Research Day, CSIS, Pace University, May 6th, 2005 Microarray Cancer... Expression cancer gene analysis using microarrays now offer unprecedented opportunities to obtain molecular... ]. DNA microarray technologies allow measurement of mRNA expression levels for tens of thousands of genes |
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Source: Tappert, Charles - Department of Computer Science, Pace University |
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Collection: Computer Technologies and Information Sciences |
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| 88 | Microarray truths and consequences , C H Woelk1 | ||
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Summary: REVIEW Microarray truths and consequences R Sásik1 , C H Woelk1 and J Corbeil1,2 1 School... : jcorbeil@ucsd.edu) Abstract For many, analysis of a microarray experiment starts with a spreadsheet... for most of the popular microarray platforms in use today. Journal of Molecular Endocrinology (2004) 33, 1 |
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Source: áik, Roman - Department of Pathology, University of California San Diego |
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Collection: Biology and Medicine |
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| 89 | Modeling and Estimation for Real-Time Microarrays HARIS VIKALOa | ||
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Summary: Modeling and Estimation for Real-Time Microarrays HARIS VIKALOa BABAK HASSIBIb ARJANG HASSIBIa... Microarrays are used for collecting information about a large number of different genomic particles si... - multaneously. Conventional fluorescent-based microarrays acquire data after the hybridization phase. Dur- ing |
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Source: Vikalo, Haris - Department of Electrical and Computer Engineering, University of Texas at Austin |
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Collection: Engineering |
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| 90 | Positional artifacts in microarrays: experimental verification and construction of COP, | ||
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Summary: Positional artifacts in microarrays: experimental verification and construction of COP... ABSTRACT Microarray technology is currently one of the most widely-used technologies in biology. Many... to show that there are two types of positional artifacts in microarray data introducing spurious |
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Source: Yu, Haiyuan - Department of Biological Statistics and Computational Biology, Cornell University |
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Collection: Biology and Medicine ; Biotechnology |
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| 91 | Positional artifacts in microarrays: experimental verification and construction of COP, | ||
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Summary: Positional artifacts in microarrays: experimental verification and construction of COP... ABSTRACT Microarray technology is currently one of the most widely-used technologies in biology. Many... to show that there are two types of positional artifacts in microarray data introducing spurious |
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|
Source: Gerstein, Mark - Department of Molecular Biophysics and Biochemistry, Yale University |
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Collection: Biology and Medicine ; Biotechnology |
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| 92 | Chemical science news from across RSC Publishing. Instant insight: Disease snapshots | ||
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Summary: of microarray technology for the fast detection and treatment of cancer and other diseases Detecting... of developing a more targeted approach to patient therapy, and monitoring response to treatment. Microarrays... ;"Microarray-based techniques have become the leading technique for the high-throughput monitoring |
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Source: Corn, Robert M.- Department of Chemistry, University of California, Irvine |
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Collection: Chemistry |
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| 93 | Recent advances of protein microarrays Claus Hultschig, Ju rgen Kreutzberger, Harald Seitz, Zolta n Konthur, | ||
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Summary: Recent advances of protein microarrays Claus Hultschig, Ju¨ rgen Kreutzberger, Harald Seitz, Zolta... greatly advanced the field of protein microarrays. Over the past two years, different types of protein... microarrays have been used for serum profiling, protein abundance determinations, and identification |
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Source: Konthur, Zoltán - Max-Planck-Institut für molekulare Genetik |
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Collection: Biology and Medicine |
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| 94 | The Stanford Microarray Database accommodates additional microarray platforms and data formats | ||
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Summary: The Stanford Microarray Database accommodates additional microarray platforms and data formats... Received September 3, 2004; Accepted September 13, 2004 ABSTRACT The Stanford Microarray Database (SMD... by providing unrest- ricted access to microarray data published by SMD users and by disseminating its ... |
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Source: Sherlock, Gavin - Department of Genetics, Stanford University |
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Collection: Biology and Medicine |
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| 95 | DNA Microarray Wet Lab Simulation Brings Genomics into the High School Curriculum | ||
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Summary: Article DNA Microarray Wet Lab Simulation Brings Genomics into the High School Curriculum A... developed a wet lab DNA microarray simulation as part of a complete DNA microarray module for high school... prelab introductory materials (e.g., a paper microarray activity), the student handouts, teachers notes |
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Source: Campbell, A. Malcolm - Biology Department, Davidson College |
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Collection: Multidisciplinary Databases and Resources ; Biology and Medicine |
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| 96 | A PROBABILISTIC MODEL FOR INHERENT NOISE AND SYSTEMATIC ERRORS OF MICROARRAYS | ||
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Summary: A PROBABILISTIC MODEL FOR INHERENT NOISE AND SYSTEMATIC ERRORS OF MICROARRAYS Arjang Hassibia... for the measurement noise in microarray systems is presented. This model includes the inherent Poisson noise... of the assay, as well as the systematic errors which are typically introduced during microarray fabrication |
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Source: Lee, Thomas H. - Department of Electrical Engineering, Stanford University |
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Collection: Engineering |
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| 97 | A Filtration-Based Protein Microarray Technique Yangqing Xu and Gang Bao* | ||
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Summary: A Filtration-Based Protein Microarray Technique Yangqing Xu and Gang Bao* Department of Biomedical... Engineering, Georgia Institute of Technology and Emory University, Atlanta, Georgia 30332 Protein microarrays... , with the current design approaches, the overall performance of protein microarrays can be com- promised |
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Source: Bao, Gang - Department of Biomedical Engineering, Georgia Institute of Technology and Emory University |
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Collection: Engineering |
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| 98 | Practical microarray analysis experimental design Heidelberg, October 2003 1 | ||
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Summary: Practical microarray analysis experimental design Heidelberg, October 2003 1 Design of microarray... experiments Ulrich Mansmann mansmann@imbi.uni-heidelberg.de Practical microarray analysis October 2003... Heidelberg #12;Practical microarray analysis experimental design Heidelberg, October 2003 2 ... |
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|
Source: Spang, Rainer - Computational Molecular Biology Group, Max-Planck-Institut für molekulare Genetik |
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Collection: Computer Technologies and Information Sciences ; Biotechnology ; Biology and Medicine |
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| 99 | A CMOS Imager for DNA Detection Samir Parikh | ||
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Summary: University of Toronto Abstract DNA Microarrays are used to analyse the DNA sequence of an organism... . These microarrays consist of many spots, one for each DNA section, that give off light in proportion... to the activation level of that DNA section. Microarray scanning equipment is used to determine light intensity |
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Source: Chow, Paul - Department of Electrical and Computer Engineering, University of Toronto |
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Collection: Computer Technologies and Information Sciences ; Engineering |
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| 100 | Biomarker selection from microarray data: a transfer learning approach | ||
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Summary: Biomarker selection from microarray data: a transfer learning approach Pierre... . Dupont (UCL Machine Learning Group) Microarray Transfer Learning October 02, 2009 1. Outline 1 Context... work with the "Microarray Team", especially with T. Helleputte P. Dupont (UCL Machine Learning Group |
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Source: Dupont, Pierre - Département d'ingénierie Informatique, Université Catholique de Louvain |
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Collection: Computer Technologies and Information Sciences |
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