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Sample search results for: a-madman annotation-based microarray

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1 A sequence-oriented comparison of gene expression measurements across different hybridization-based
 

Summary:  compared to annotation-based matches. Generally, consistency was good for highly expressed genes... - tary Table 1c online. Mapping of genes across platforms. Gene mapping was conducted using annotation-based... and sequence-based approaches. For the annotation-based approach, MatchMiner47 was used to map UniGene (UG

  

Source: Church, George M. - Wyss Institute for Biologically Inspired Engineering & Department of Genetics, Harvard University

 

Collection: Biotechnology

 
2 BioMed Central Page 1 of 9
 

Summary:  annotations based on NCI-T also ena- bles formulation of queries (by browsing) to pose requests such as: 1... Software Annotation and query of tissue microarray data using the NCI Thesaurus Nigam H Shah*1, Daniel L Rubin1, Inigo... - musen@stanford.edu * Corresponding author Abstract Background: The Stanford Tissue ...

  

Source: Rubin, Daniel L. - Department of Radiology, Stanford University

 

Collection: Biology and Medicine

 
3 Animal Science 890 Section 3 Design and analysis of microarray gene expression experiments
 

Summary:  Animal Science 890 Section 3 Design and analysis of microarray gene expression experiments Fall... relevant to gene expression data with an emphasis on cDNA microarray experiments. COURSE CONTENT... : Introduction to microarray technology · Basic introduction · Sources of variability o Affymetrix microarrays ...

  

Source: Rosa, Guilherme J. M. - Departments of Dairy Science & Biostatistics and Medical Informatics, University of Wisconsin at Madison

 

Collection: Mathematics

 
4 BioMed Central Page 1 of 6
 

Summary:  for Affymetrix human GeneChips, based on the information contained in the GeneAnnot database. GeneAnnot-based... : GeneAnnot-based custom CDFs solve the problem of a reliable reconstruction of expression levels... themselves if considered singularly. GeneAnnot based CDFs are provided with libraries compliant

  

Source: Lancet, Doron - Department of Molecular Genetics, Weizmann Institute of Science

 

Collection: Biology and Medicine

 
5 Ontology-driven Indexing of Public Datasets for Translational Bioinformatics Nigam H. Shah, Clement Jonquet, Annie P. Chiang, Atul J. Butte, Rong Chen and Mark A.
 

Summary:  _a retroperitoneal neoplasms. Creation of annotations based on transitive closure step is done offline because... repositories. We have previously developed methods to map text-annotations of tissue microarrays to concepts... and integration of tissue and gene expression microarray data. We enable ...

  

Source: Ecole Polytechnique, Centre de mathématiques

 

Collection: Mathematics

 
6 EDGE: A Centralized Resource for the Comparison, Analysis, and Distribution of Toxicogenomic Information
 

Summary:  microarray was annotated based on the sequence verifications of the PCR products. These sequence... Bank databases. These clones were then hand- annotated based on the homology of these clones to the databases... Transcriptional profiling via microarrays holds great ...

  

Source: Bradfield, Christopher A. - McArdle Laboratory for Cancer , University of Wisconsin at Madison; Craven, Mark - Departments of Biostatistics and Medical Informatics & Computer Sciences, University of Wisconsin at Madison

 

Collection: Biology and Medicine ; Computer Technologies and Information Sciences

 
7 IEEE/ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS 1 High Confidence Rule Mining for
 

Summary:  GO annotations. Based on this, we evaluated the rules we identify using GOstat [21], a web... for Microarray Analysis Tara McIntosh, Sanjay Chawla T. McIntosh and S. Chawla are with The School of Information... from microarray datasets. Microarray datasets typically contain an order of ...

  

Source: Chawla, Sanjay - School of Information Technologies, University of Sydney

 

Collection: Computer Technologies and Information Sciences

 
8 Data Mining Techniques for Microarray Datasets Lei Liu Jiong Yang Anthony K. H. Tung
 

Summary:  Data Mining Techniques for Microarray Datasets Lei Liu Jiong Yang Anthony K. H. Tung U. of Illinois... @eecs.cwru.edu atung@comp.nus.edu.sg Development in microarray technology has result in revolutionary changes... in biological research. Using microarrays, the expression level for thousands of genes can be monitored

  

Source: Yang, Jiong - Department of Electrical Engineering and Computer Sciences, Case Western Reserve University

 

Collection: Computer Technologies and Information Sciences

 
9 Annals of Biomedical Engineering, Vol. 33, No. 6, June 2005 ( 2005) p. 866 DOI: 10.1007/s10439-005-4499-3
 

Summary:  -005-4499-3 Book Review Microarray Quality Control. By W. Zhang, I. Shmule- vich, and J. Astola, John Wiley... , Hoboken, New Jersey, 2004, 136 pages, Hardcover, ISBN: 0471453447 "Microarray Quality Control... in microarray experiments, starting from the preparation of biological samples and conclud- ing with the data

  

Source: Shmulevich, Ilya - Department of Bioengineering, University of Washington at Seattle

 

Collection: Biotechnology ; Biology and Medicine

 
10 COMPUTATIONAL BIOMEDICINE: A MULTIDISCIPLINARY CROSSROADS
 

Summary:  biologische en genetische processen experimenteel te monitoren (`DNA chips', microarrays,...); Ons... ......................................................................................................................33 III. Microarrays in oncology: from disease management to fundamental research ........34 III.1... . ...

  

Source: Leuven, Katholieke Universiteit, Department of Electrical Engineering, SCD Division

 

Collection: Engineering

 
11 Lecture 2: Microarrays Central dogma of molecular biology: The state of a cell at any given time is governed
 

Summary:  Lecture 2: Microarrays Central dogma of molecular biology: The state of a cell at any given time... to study with current technology. - DNA microarrays: technology for studying mRNA levels. - Monitoring... corresponds to a single gene. #12;Typical DNA microarray experiment: 1. Take a small glass slide (chip). 2

  

Source: Cabrera, Javier - Department of Statistics, Rutgers University

 

Collection: Biology and Medicine ; Mathematics

 
12 DNA microarray (spot) .
 

Summary:  1. DNA microarray DNA (spot) . DNA probe , probe (hybridization... ) . DNA microarray cDNA oligonucleotide oligonucleotide cDNA probe . oligonucleotide... microarray , DNA , probe . oligonucleotide microarray ...

  

Source: Zhang, Byoung-Tak - School of Computer Science and Engineering, Seoul National University

 

Collection: Computer Technologies and Information Sciences ; Biology and Medicine

 
13 1. What is a microarray? 2. Describe one use of a microarray.
 

Summary:  1. What is a microarray? 2. Describe one use of a microarray. 3. Dr. Flora is studying the effects... a soybean gene microarray: Circle the dots for gene sequences that do not show a difference in gene... WHY you chose these gene sequences. Put the following microarray technology steps in order. Write

  

Source: Campbell, A. Malcolm - Biology Department, Davidson College

 

Collection: Multidisciplinary Databases and Resources ; Biology and Medicine

 
14 Evanescent-imaging-ellipsometry-based microarray Srivatsa Venkatasubbarao
 

Summary:  Evanescent-imaging-ellipsometry-based microarray reader Srivatsa Venkatasubbarao Intelligent... -less ellipsometric imaging microarray reader. The ability of the ellipsometric microarray reader to measure binding... of sample to microarray surface is verified using oligonucleotide complementary DNA cDNA ...

  

Source: Chipman, Russell - College of Optical Science, University of Arizona

 

Collection: Engineering

 
15 16:960:690:02 -#35086 Special Topics: Exploration and Analysis of DNA Microarray and Protein Array Data
 

Summary:  16:960:690:02 - #35086 Special Topics: Exploration and Analysis of DNA Microarray and Protein Array... . Amaratunga J. Cabrera. Exploration and Analysis of DNA. Microarray and Protein Array Data. Wiley 2003. (The... . The role of genomics in biomedical research. Proteins. 3. Microarray Exeriments. Types of ...

  

Source: Cabrera, Javier - Department of Statistics, Rutgers University

 

Collection: Biology and Medicine ; Mathematics

 
16 NHGRIfactsheet DNA Microarray Technology
 

Summary:  NHGRIfactsheet DNA Microarray Technology What is DNA microarray technology? Although all... genes at once. With the development of DNA microarray technology, however, scientists can now examine... between individual genes. How does microarray work? Microarray is based on a database of ...

  

Source: Nguyen, Danh - Department of Public Health Sciences, University of California, Davis

 

Collection: Biology and Medicine ; Mathematics

 
17 Systematic Planning of Genome-Scale Experiments in Poorly Studied Species
 

Summary:  in a poorly studied species for functional annotation based on existing knowledge in a well characterized... for functional annotation based on related model organisms or other well- studied species. To further validate... microarray data compendium. In silico evaluations estimate that ...

  

Source: Dunham, Maitreya - Department of Genome Sciences, University of Washington at Seattle

 

Collection: Biology and Medicine ; Biotechnology

 
18 Microarray Datenanalyse Kapitel 1: Einfhrung, Normalisierung,
 

Summary:  Vorlesung Microarray Datenanalyse Kapitel 1: Einführung, Normalisierung, Differentielle Gene... , Multiples Testen Kapitel 2: Clustering und Klassifikation #12; Vorlesung: Microarray Datenanalyse... : Microarray Datenanalyse Kapitel 2 ............ ... ... ... ... i k i=1,...,n Proben k=1,...p Gene

  

Source: Spang, Rainer - Computational Molecular Biology Group, Max-Planck-Institut für molekulare Genetik

 

Collection: Computer Technologies and Information Sciences ; Biotechnology ; Biology and Medicine

 
19 Classification by Nearest Shrunken Centroids
 

Summary:  microarray analysis 2005 1 #12;Two roads to classification 1. model class probabilities QDA, LDA, ... 2... by SVM and PAM, Practical Microarray Analysis 2004 2 #12;What's the problem? In classification you have... , Practical Microarray Analysis 2004 3 #12;Discriminant analysis and gene selection Florian Markowetz

  

Source: Spang, Rainer - Computational Molecular Biology Group, Max-Planck-Institut für molekulare Genetik

 

Collection: Computer Technologies and Information Sciences ; Biotechnology ; Biology and Medicine

 
20 BIOINFORMATICS APPLICATIONS NOTE Vol. 21 no. 11 2005, pages 27892790
 

Summary:  Summary: MADE4, microarray ade4, is a software package that facilitates multivariate analysis... of microarray gene-expression data. MADE4 accepts a wide variety of gene-expression data formats. MADE4 takes... these for application to microarray data. In addition, MADE4 provides new graphical and visualization tools that aid

  

Source: Thioulouse, Jean - University Lyon 1

 

Collection: Environmental Sciences and Ecology


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21 Hughes,T. R.,Marton,M. J.,Jones, A.R.,Roberts,C. J.,Stoughton,R.,Armour,C. D.,Bennett, H. A., Coffey, E., Dai, H., He, Y. D., Kidd, M. J., King, A. M., Meyer, M. R., Slade, D., Lum,
 

Summary:  , 807­814. [15] Extrapolating Traditional DNA Microarray Statistics to Tiling and Protein Microarray... ZHU, MICHAEL SNYDER, and MARK B. GERSTEIN Abstract A credit to microarray technology is its broad... application. Two experi- ments--the tiling microarray experiment and the protein ...

  

Source: Yu, Haiyuan - Department of Biological Statistics and Computational Biology, Cornell University

 

Collection: Biology and Medicine ; Biotechnology

 
22 06s2: BINF1001 Bioinformatics 1 Clustering Microarray Data
 

Summary:  06s2: BINF1001 Bioinformatics 1 Clustering Microarray Data September 6, 2006 #12;Aims This lecture... will introduce you to microarray data and clustering methods that can be applied to discover patterns of gene... , Chapter 10, pp 519 ff] BINF1001: September 6, 2006 Clustering Microarray Data: Slide 1 #12;Introduction

  

Source: Bain, Mike - School of Computer Science and Engineering, University of New South Wales

 

Collection: Computer Technologies and Information Sciences

 
23 Classification by Nearest Shrunken Centroids
 

Summary:  Diagnostics Group Berlin Practical DNA microarray analysis 2004 1 #12;Two roads to classification 1. model... , SVM Florian Markowetz, Classification by SVM and PAM, Practical Microarray Analysis 2004 2 #12;What... , Classification by SVM and PAM, Practical Microarray Analysis 2004 3 #12;Discriminant analysis and gene selection

  

Source: Spang, Rainer - Computational Molecular Biology Group, Max-Planck-Institut für molekulare Genetik

 

Collection: Computer Technologies and Information Sciences ; Biotechnology ; Biology and Medicine

 
24 This Provisional PDF corresponds to the article as it appeared upon acceptance. Fully formatted PDF and full text (HTML) versions will be made available soon.
 

Summary:  to prioritize the Prosecutor results. For some organisms, functional annotations based on curated knowledge... with functional annotations based on curated regulatory network information from RegulonDB [30]. The results 6 #12... function for prokaryotes using DNA microarray data, genomic ...

  

Source: Breitling, Rainer - Groningen Bioinformatics Centre, Rijksuniversiteit Groningen

 

Collection: Biology and Medicine ; Biotechnology

 
25 Microarrays onMicroarrays onMicroarrays onMicroarrays onMicroarrays onMicroarrays onMicroarrays onMicroarrays on plantsplantsplantsplantsplantsplantsplantsplants
 

Summary:  Microarrays onMicroarrays onMicroarrays onMicroarrays onMicroarrays onMicroarrays onMicroarrays onMicroarrays... are hybridized to gene probes on microarray slides, and the slides are scanned. Images of the ...

  

Source: Bones, Atle M. - Institutt for biologi, Norwegian University of Science and Technology

 

Collection: Biology and Medicine

 
26 Int J Software Informatics, Vol.2, No.2, December 2008, pp. 215231 E-mail: ijsi@iscas.ac.cn International Journal of Software and Informatics, ISSN 1673-7288 http://www.ijsi.org
 

Summary:  two conditions are similar and the expression levels of two genes are correlated. Annotation-based... knowledge 221 depend mainly on the availability and completeness of the annotation bases. 3.3 Pattern... of thousands of genes in par- allel. These include hybridization-based technologies, such as DNA ...

  

Source: Ecole Polytechnique, Centre de mathématiques

 

Collection: Mathematics

 
27 Approaches and Milestones: Objective 1: Identify innovative technologies.
 

Summary:  a literature review of qPCR, microarray, microfluidics and lab-on-a-chip technologies to understand the state... PCR, microarray, microfluidics and lab-on-a-chip technologies for waterborne pathogen detection and/or monitoring... qPCR, microarray, microfluidics and lab-on-a-chip, which could be used for waterborne pathogen

  

Source: Environmental Protection Agency, Technology Innovation Program (TIP)

 

Collection: Multidisciplinary Databases and Resources ; Environmental Management and Restoration Technologies

 
28 Appendix A: Microarray Methodology Overview DNA microarrays allow an investigator to measure simultaneously the relative activity
 

Summary:  Appendix A: Microarray Methodology Overview DNA microarrays allow an investigator to measure... simultaneously the relative activity of every gene in a genome. A microarray consists of a glass slide with DNA... . The single-stranded DNA printed on the microarray is the target bound by fluorescently labeled ...

  

Source: Campbell, A. Malcolm - Biology Department, Davidson College

 

Collection: Multidisciplinary Databases and Resources ; Biology and Medicine

 
29 Archana Rao Graduate Student
 

Summary:  Preliminary Examination "Assessment of microarray immobilization and capture using TOF-SIMS (time... -of-flight secondary ion mass spectrometry)" Microarray technology facilitates high-throughput, parallel and semi... -quantitative assessment of analyte abundance relevant to many useful applications. DNA microarrays have been ...

  

Source: Simons, Jack - Department of Chemistry, University of Utah

 

Collection: Chemistry

 
30 FRS Win 2008 D. Nguyen Assignment # 3: Please provide answers to the following questions for the reading assignment: "Viral
 

Summary:  for the reading assignment: "Viral discovery and sequence recovery using DNA microarrays" Reading: Read abstract... that a previous version of a microarray that they developed contained 1,6000 oligo's from 140 viruses. (a) Why... are they spotting/placing these sequences from so many different viruses (140 of them)? (b) On the new ...

  

Source: Nguyen, Danh - Department of Public Health Sciences, University of California, Davis

 

Collection: Biology and Medicine ; Mathematics

 
31 Genome Analysis Genome-Wide ORFeome Cloning and Analysis
 

Summary:  clones matched to the existing cDNA sequences or gene annotation based on single read sequencing from... distinct Arabidopsis organ types and the cultured cells was profiled using a 70-mer oligo microarray... ; Riechmann, 2002). In these regards, microarray profiling has become an important approach to ...

  

Source: Deng, Xing-Wang - Department of Molecular Biophysics and Biochemistry, Yale University

 

Collection: Biology and Medicine ; Biotechnology

 
32 Classification by Support Vector Machines Florian Markowetz
 

Summary:  Genetics ­ Computational Molecular Biology ­ Berlin Practical DNA Microarray Analysis 2004 1 #12;Overview I... , Classification by SVM, Practical DNA Microarray Analysis 2004 2 #12;Supervised Learning Calvin, I'm still... by SVM, Practical DNA Microarray Analysis 2004 3 #12;Unsupervised Learning Calvin, I'm still confused

  

Source: Spang, Rainer - Computational Molecular Biology Group, Max-Planck-Institut für molekulare Genetik

 

Collection: Computer Technologies and Information Sciences ; Biotechnology ; Biology and Medicine

 
33 Classification by Support Vector Machines Florian Markowetz
 

Summary:  Genetics ­ Computational Molecular Biology ­ Berlin Practical DNA Microarray Analysis 2003 1 #12;Overview I... , Classification by SVM, Practical DNA Microarray Analysis 2003 2 #12;Supervised Learning Calvin, I'm still... by SVM, Practical DNA Microarray Analysis 2003 3 #12;Unsupervised Learning Calvin, I'm still confused

  

Source: Spang, Rainer - Computational Molecular Biology Group, Max-Planck-Institut für molekulare Genetik

 

Collection: Computer Technologies and Information Sciences ; Biotechnology ; Biology and Medicine

 
34 Interactive Semisupervised Learning for Microarray Analysis
 

Summary:  Interactive Semisupervised Learning for Microarray Analysis Yijuan Lu, Qi Tian, Feng Liu, Maribel... Sanchez, and Yufeng Wang Abstract--Microarray technology has generated vast amounts of gene expression... patterns in microarray data. However, the discrepancy between the rich expression profiles and the limited

  

Source: Texas at San Antonio, University of - Division of Computer Science

 

Collection: Computer Technologies and Information Sciences

 
35 Jean Yee Hwa Yang School of Mathematics and Statistics,
 

Summary:  DNA microarrays. Student Researcher, Fall 1999, 2000 and 2001. Genetics and Bioinformatics Group, Walter and Eliza... DNA microarray experiment. Committee: Terence P. Speed, Chair; David A. Freedman; John Ngai. ­ M.A. in Statistics... Normalization of Two-Channel Spotted Microarrays. Statistical Applications in Genetics and ...

  

Source: Yang, Yee Hwa - School of Mathematics and Statistics, University of Sydney

 

Collection: Mathematics ; Biotechnology

 
36 Extrapolating Traditional DNA Microarray Statistics to the Tiling and Protein Microarray
 

Summary:  Extrapolating Traditional DNA Microarray Statistics to the Tiling and Protein Microarray... Haven, CT 06520, USA Abstract A credit to the microarray technology is its broad application. Two... experiments - the tiling microarray experiment, and the protein microarray experiment are exem- ...

  

Source: Gerstein, Mark - Department of Molecular Biophysics and Biochemistry, Yale University

 

Collection: Biology and Medicine ; Biotechnology

 
37 Navigation through Structured Microarray Analysis towards
 

Summary:  Navigation through Structured Microarray Analysis towards Clarified Diagnosis JulieJulie Floch... /26Navigation through Structured Microarray Analysis towards Clarified Diagnosis OVERVIEWOVERVIEW zz I... ;26/05/03 4/26Navigation through Structured Microarray Analysis towards Clarified Diagnosis zz Observation

  

Source: Spang, Rainer - Computational Molecular Biology Group, Max-Planck-Institut für molekulare Genetik

 

Collection: Computer Technologies and Information Sciences ; Biotechnology ; Biology and Medicine

 
38 Copyright 2007 by the Genetics Society of America DOI: 10.1534/genetics.106.066472
 

Summary:  to provide a functional annotation based on nucleic acid sequence identity and/or amino acid sequence... annotation of maize genes and the analysis of their microarray expression patterns. We have created... students can make meaningful contributions to the functional annotation and analysis of microarray

  

Source: Schnable, Patrick S. - Center for Plant Genomics & Department of Genetics, Development and Cell Biology, Iowa State University

 

Collection: Biology and Medicine ; Biotechnology

 
39 Progress of Princeton Project: Content-Based Similarity Search with MyLifeBits
 

Summary:  be consulted with exceeding speed and flexibility" Attribute/annotation-based approach Useful, but have... limitations Our approach Content-based similarity search capability Work together with · Attribute/annotation-based... Image similarity search benchmark Data types Images, audio, video, 3D-shapes, genomic microarray #12

  

Source: Narasayya, Vivek - Data Management, Exploration and Mining Group, Microsoft Research

 

Collection: Computer Technologies and Information Sciences

 
40 Detection of biomolecular microarrays without fluorescent-labeling agents J. P. Landrya
 

Summary:  Detection of biomolecular microarrays without fluorescent-labeling agents J. P. Landrya , X. D... -RD) scanning microscope for imaging microarrays of label-free protein and DNA. Such a microscope complements... ) detect binding reactions on microarrays without labeling, 2) quantitatively measure the optical

  

Source: Zhu, Xiangdong - Department of Physics, University of California, Davis

 

Collection: Materials Science ; Physics


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41 A T C T G A T C C T T C T G A A C G G A A C T A A T T T C A A G A A T C T G A T C C T T G A A C T A C C T T C C A A G G T G
 

Summary:  S New Stringent Two-Color Gene Expression Workflow Enables More Accurate and Reproducible Microarray... in the development and optimization of robust microarray processing protocols. New product lines are being developed... to optimize processes associated with microarray analysis such as sample labeling, hybridization, wash

  

Source: Birmingham, University of - School of Psychology, Sensory Motor Neuroscience Centre

 

Collection: Biology and Medicine

 
42 Proceedings of the ECCB'2003, page 1315 Modular Decision System and Information Integration for Improved
 

Summary:  . This may not be surprising, since microarrays are restricted to measuring the RNA abundance within cells... . Many important post­translational events may not be reflected in microarray measurements. To exploit... the full power of microarray techniques for medical applications, it will be necessary to integrate

  

Source: Futschik, Matthias E. - FachInstitut Theoretische Biologie, Humboldt-Universität zu Berlin

 

Collection: Biology and Medicine

 
43 Proceedings of the ECCB'2003, page 13-15 Modular Decision System and Information Integration for Improved
 

Summary:  . This may not be surprising, since microarrays are restricted to measuring the RNA abundance within cells... . Many important post-translational events may not be reflected in microarray measurements. To exploit... the full power of microarray techniques for medical applications, it will be necessary to integrate

  

Source: Futschik, Matthias E. - FachInstitut Theoretische Biologie, Humboldt-Universität zu Berlin

 

Collection: Biology and Medicine

 
44 Vol. 23 ISMB/ECCB 2007, pages i222i229 BIOINFORMATICS doi:10.1093/bioinformatics/btm222
 

Summary:  that effectively captures characteristics of a gene's local functional environment. Function annotations based... of a gene's local functional environment. Functional annotations based on this statistic are then assessed... , Berkeley, CA, USA ABSTRACT Motivation: The rapid accumulation of ...

  

Source: Zhou, Xianghong Jasmine - Department of Biological Sciences, University of Southern California

 

Collection: Biotechnology ; Biology and Medicine

 
45 Classification by Support Vector Machines Florian Markowetz
 

Summary:  Genetics ­ Computational Molecular Biology ­ Berlin Practical DNA Microarray Analysis 2003 1 #12;Overview I... , Classification by SVM, Practical DNA Microarray Analysis 2003 2 #12;Supervised learning Calvin, I'm still... by SVM, Practical DNA Microarray Analysis 2003 3 #12;Supervised learning Calvin, I'm still confused about

  

Source: Spang, Rainer - Computational Molecular Biology Group, Max-Planck-Institut für molekulare Genetik

 

Collection: Computer Technologies and Information Sciences ; Biotechnology ; Biology and Medicine

 
46 80 Rice is life: scientific perspectives for the 21st century system, random overexpression of the Arabidopsis full-length
 

Summary:  in Nipponbare, which would make annotations based on Nipponbare sequence data impossible. Gene-specific primers... integrative approaches cen- tered on whole-genome nucleotide tiling-path microarray and array-guided full... 81 Fig. 1. A proposed workflow for using tiling microarray to improve rice genome ...

  

Source: Deng, Xing-Wang - Department of Molecular Biophysics and Biochemistry, Yale University; National Institute of Biological Sciences, Beijing

 

Collection: Biology and Medicine ; Biotechnology

 
47 Predicting Microarray Signals by Physical Modeling
 

Summary:  Predicting Microarray Signals by Physical Modeling Josh Deutsch University of California Santa Cruz... Predicting Microarray Signals by Physical Modeling ­ p.1/39 #12;Collaborators Shoudan Liang NASA Ames Onuttom... Narayan UCSC Predicting Microarray Signals by Physical Modeling ­ p.2/39 #12;Outline Background Gene

  

Source: Deutsch, Josh - Physics Department, University of California at Santa Cruz

 

Collection: Physics

 
48 Full Genome Microarrays Data Analysis
 

Summary:  Goals Full Genome Microarrays Data Analysis Bioinformatics RNA-free Teaching Chips H e l p i n g... S t u d e n 1Biology & 2Math Depts., Davidson College, Davidson, NC Bar Code MicroarraysGCAT macampbell... @davidson.edu www.bio.davidson.edu/campbell 1 2 3 4 5 6 7 8 9 MicroArray Genome Imaging & Clustering Tool www

  

Source: Campbell, A. Malcolm - Biology Department, Davidson College

 

Collection: Multidisciplinary Databases and Resources ; Biology and Medicine

 
49 Visualization of Gene Combinations Christian Tominski & Heidrun Schumann
 

Summary:  · Microarrays are fundamental technology · Huge volumes of microarray data collected: Gene Expression Omnibus... of these data? #12;Background · Microarray data analysis involves many intricate steps Digitalization... Significance Analysis Self-Organizing Maps #12;Background · Microarray data ­ Set of ...

  

Source: Tominski, Christian - Institut für Informatik, Universität Rostock

 

Collection: Computer Technologies and Information Sciences

 
50 By: Julie Ramirez Andrea DeFelice
 

Summary:  for type 2 diabetes. #12;Why use a microarray? · Useful tool for the better understanding of insulin... -regulated diabetes-related diseases. · Using a microarray will lead to a better understanding of the origin... intervention and treatment options. #12;Why a Reverse Microarray? · This will help scientists have a better

  

Source: Nguyen, Danh - Department of Public Health Sciences, University of California, Davis

 

Collection: Biology and Medicine ; Mathematics

 
51 Microarray Platform for Profiling Enzyme Activities in Complex Proteomes Stephan A. Sieber, Tony S. Mondala, Steven R. Head, and Benjamin F. Cravatt*
 

Summary:  Microarray Platform for Profiling Enzyme Activities in Complex Proteomes Stephan A. Sieber, Tony S... at the expense of throughput and sample conservation. Here, we report a microarray platform for ABPP... that overcomes many of the technical limitations of both gel- and LC-MS-based methods. A microarray version

  

Source: Cravatt, Benjamin - Department of Cell Biology, Scripps Research Institute

 

Collection: Biology and Medicine

 
52 1R01-GM072619-01: "Optimization of oligonucleotide array design" PI: Dr. Cynthia Gibas, UNCC
 

Summary:  -PI: Dr. Jennifer W. Weller GMU High-quality, quantitative microarrays are an absolute requirement... validated solution hybridization parameters into the processes of microarray design and microarray data... with established microarray data analysis procedures. The predictive models that we develop can be ...

  

Source: Weller, Jennifer Walsh - Bioinformatics Program, University of North Carolina at Charlotte

 

Collection: Computer Technologies and Information Sciences ; Biotechnology

 
53 FRS D. Nguyen SARS article
 

Summary:  sequence. In the article the authors stated that a previous version of a microarray that they developed... different viruses (140 of them)? (b) On the new microarray that they are reporting in this paper... does this mean? (c) Describe the new microarray in terms of how many oligo's there are per virus

  

Source: Nguyen, Danh - Department of Public Health Sciences, University of California, Davis

 

Collection: Biology and Medicine ; Mathematics

 
54 Microarray experiments: New statistical tools facilitate biological interpretation
 

Summary:  annotation (based on keywords, GeneOntologies, genomic location,...) Open analysis, no pre-defined cutoff... Microarray experiments: New statistical tools facilitate biological interpretation Rainer Breitling... .herzyk}@bio.gla.ac.uk BRC Abstract After data collection, biologists analysing a microarray ...

  

Source: Breitling, Rainer - Groningen Bioinformatics Centre, Rijksuniversiteit Groningen

 

Collection: Biology and Medicine ; Biotechnology

 
55 Robotic spotting of cDNA and oligonucleotide microarrays
 

Summary:  Robotic spotting of cDNA and oligonucleotide microarrays Richard P. Auburn1 , David P. Kreil1... Laboratory, Dept of Physics, University of Cambridge, Madingley Road, Cambridge CB3 0HE, UK DNA microarrays... to their flexibility and value, mechanically spotted microarrays remain the most popular platform. Here, we review

  

Source: Kreil, David - Inference Group, Cavendish Laboratory, University of Cambridge

 

Collection: Physics

 
56 Classification by Support Vector Machines Florian Markowetz
 

Summary:  Genetics ­ Computational Molecular Biology ­ Berlin Practical DNA Microarray Analysis 2003 1 #12;Overview I... by SVM, Practical DNA Microarray Analysis 2003 2 #12;Learning from examples Gene expression is a complex... } Diagnosis = fX (new patient) Florian Markowetz, Classification by SVM, Practical DNA Microarray Analysis

  

Source: Spang, Rainer - Computational Molecular Biology Group, Max-Planck-Institut für molekulare Genetik

 

Collection: Computer Technologies and Information Sciences ; Biotechnology ; Biology and Medicine

 
57 An open letter on microarray data from the MGED Society
 

Summary:  An open letter on microarray data from the MGED Society A fundamental principle guiding... ) and National Center for Biotechnology Information (NCBI). Similarly, we, members of the Microarray Gene... now require the submission of microarray data to public repositories as part of the process

  

Source: Sherlock, Gavin - Department of Genetics, Stanford University

 

Collection: Biology and Medicine

 
58 An open letter on microarray data from the MGED Society A fundamental principle guiding the
 

Summary:  An open letter on microarray data from the MGED Society A fundamental principle guiding... ) and National Center for Biotechnology Information (NCBI). Similarly, we, members of the Microarray Gene... now require the submission of microarray data to public repositories as part of the process

  

Source: Sherlock, Gavin - Department of Genetics, Stanford University

 

Collection: Biology and Medicine

 
59 BioMed Central Page 1 of 12
 

Summary:  Research article Autocorrelation analysis reveals widespread spatial biases in microarray experiments Amnon Koren1... .tirosh@weizmann.ac.il; Naama Barkai* - naama.barkai@weizmann.ac.il * Corresponding author Abstract Background: DNA microarrays... research. However, the microarray technology suffers from various forms of biases ...

  

Source: Barkai, Naama - Departments of Molecular Genetics & Physics of Complex Systems, Weizmann Institute of Science

 

Collection: Biotechnology

 
60 Population genomics of drug resistance in Candida albicans
 

Summary:  values, S. cerevisiae homologues, Blast-E values, and annotation based on C. albicans (http: alces... microarrays. In contrast to other microarray-based studies of gene expression in yeasts that have focused... in the microarray experiments (ADH4, MDR1, YPL88, YPX98, YPR127W, GRE99, ...

  

Source: Anderson, James B. - Department of Ecology and Evolutionary Biology, University of Toronto; Kohn, Linda M. - Department of Ecology and Evolutionary Biology, University of Toronto

 

Collection: Biology and Medicine ; Environmental Sciences and Ecology


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61 A CMOS Image Sensor for DNA Microarrays Samir Parikh, Glenn Gulak, Paul Chow
 

Summary:  A CMOS Image Sensor for DNA Microarrays Samir Parikh, Glenn Gulak, Paul Chow University of Toronto... microarray scanner. The detection limit of 4590 fluorophores/µm2 is compared with 4.49 fluorophores/µm2... of a commercial photomultiplier-tube-based microarray scanner. The performance gap can be reduced by improving

  

Source: Chow, Paul - Department of Electrical and Computer Engineering, University of Toronto

 

Collection: Computer Technologies and Information Sciences ; Engineering

 
62 Fabricating RNA Microarrays with RNA-DNA Surface Ligation Chemistry
 

Summary:  Fabricating RNA Microarrays with RNA-DNA Surface Ligation Chemistry Hye Jin Lee, Alastair W. Wark... to create renewable RNA microarrays from single-stranded DNA (ssDNA) microar- rays on gold surfaces... of the ssRNA microarray in terms of (i) the hybridization adsorption of complementary DNA onto the RNA array

  

Source: Corn, Robert M.- Department of Chemistry, University of California, Irvine

 

Collection: Chemistry

 
63 While conventional DNA and protein microarray technologies have been a boon to industrial and academic research,investigators interest-
 

Summary:  #12;While conventional DNA and protein microarray technologies have been a boon to industrial... and microarray technology are beginning to address this need for novel biophysical methods in glycomics [Figure 1... and glycoconjugates [2]. It remains to be seen if a single platform will emerge as the standard for glycan microarray

  

Source: Ratner, Daniel M. - Department of Bioengineering, University of Washington at Seattle

 

Collection: Biology and Medicine ; Biotechnology

 
64 Statistical Applications in Genetics and Molecular Biology
 

Summary:  Concerns About Unreliable Data from Spotted cDNA Microarrays Due to Cross-Hybridization and Sequence Errors... ://www.bepress.com/sagmb #12;Concerns About Unreliable Data from Spotted cDNA Microarrays Due to Cross... concerns regarding the reliability of data generated by spotted cDNA microarrays. Two types of error we

  

Source: Murphy, Robert F. - Department of Biological Sciences & School of Computer Science, Carnegie Mellon University

 

Collection: Biology and Medicine ; Computer Technologies and Information Sciences

 
65 1359-6446/02/$ see front matter 2002 Elsevier Science Ltd. All rights reserved. PII: DDT Vol. 7, No. 18 (Suppl.), 2002
 

Summary:  such as transcriptional profiling [5], high-throughput mass spectrometry [6] and pro- tein microarrays [7] allow... to these methods, Ziauddin and colleagues have re- cently described a microarray-driven technique for the high... of cells over- expressing defined gene products. Such trans- fected cell microarrays (cell ...

  

Source: Sabatini, David M. - Whitehead Institute for Biomedical Research & Department of Biology, Massachusetts Institute of Technology (MIT)

 

Collection: Biology and Medicine

 
66 DNA Microarrays revolutionized the field of genomics, enabling biologists to study thousands of genes simultaneously. In this monograph we
 

Summary:  DNA Microarrays revolutionized the field of genomics, enabling biologists to study thousands... to restore the missing data on the DNA Microarrays, which was corrupted due to various factors. Second, how... -3-639-17994-1 Amir Niknejad Shmuel Friedland APPLICATIONS OF LINEAR ALGEBRA TO DNA MICROARRAYS IMPUTATION ALGORITHMS

  

Source: Friedland, Shmuel - Department of Mathematics, Statistics, and Computer Science, University of Illinois at Chicago

 

Collection: Mathematics

 
67 The 7th International Meeting of the Microarray Gene Expression Data Society Modeling and Finding Gene Regulatory Network
 

Summary:  The 7th International Meeting of the Microarray Gene Expression Data Society Modeling and Finding... network for im- proved gene regulatory network representation based on microarray gene expression data... by finding logical func- tions that best fit the graph of pathways. We are testing our ideas using microarray

  

Source: Song, Joe - Department of Computer Science, New Mexico State University

 

Collection: Computer Technologies and Information Sciences

 
68 Suggested Reading 1. Pevsner, J, Bioinformatic Approaches to Ribonucleic Acid (RNA), in Bioinformatics and
 

Summary:  . Pevsner, J, Gene Expression: Microarray Data Analysis, in Bioinformatics and Functional Genomics. 2009... with Microarrays Part II: Data Analysis. Hypothesis, 2007. 5(1): p. 15-22. 5. Kicic, A, et al., Decreased... Crit Care Med, 2010. 181(9): p. 889-98. 6. Smyth, GK, Limma: Linear Models for Microarray Data

  

Source: Gleeson, Joseph G. - Department of Neurosciences, University of California at San Diego

 

Collection: Biology and Medicine

 
69 Seminar Series Mark E. Berres, Ph.D.
 

Summary:  , Genetics/Biotechnology Center, 425 Henry Mall Luminescent Quantum Dot Bioconjugates and Microarray Assays... some of my work on using quantum dots as ultra-sensitive reporters for microarray experiments. Results... is readily achievable. Preliminary experiments with microarray feature detection with streptavidin

  

Source: Payseur, Bret - Department of Medical Genetics, University of Wisconsin at Madison

 

Collection: Biology and Medicine

 
70 UNDERSTANDING THE GLOBAL PROPERTIES OF FUNCTIONALLY-RELATED GENE NETWORKS USING THE
 

Summary:  -related genes using the annotations based on the Gene Ontology. We define two genes to be connected when... and cellular component. Our functionally-related gene networks are constructed from annotations based... are paired when they are found to be coexpressed in the microarray ...

  

Source: Dasgupta, Partha - Department of Computer Science and Engineering, Arizona State University

 

Collection: Computer Technologies and Information Sciences

 
71 A Supervised Learning Approach to the Ensemble Clustering of Genes Andrew K. Rider1,3,4
 

Summary:  according to both annotation-based and interaction-based validation methods in UPGMA and Walktrap clusters... . E. coli GO annotation based validation Friedman's test results for the BHI were similar to the F... an ensemble similarity measure. The annotation-based validation in Figures 4 and 5 was similarly ...

  

Source: Chawla, Nitesh V. - Department of Computer Science and Engineering, University of Notre Dame

 

Collection: Computer Technologies and Information Sciences

 
72 n June, Nick Fisher issued a dire-sounding warning. He is president of the Statistical
 

Summary:  more thanglancingatanelectrophoreticgel. Over the past few years, microarrays, also known as DNA chips... . But there are no simple answers: interpreting microarray experiments is taxing the skills of even the most adept number... -crunchers. "It's a technical and esoteric topic,"says Paul Meltzer, a cancer geneticist and ...

  

Source: Rocke, David M. - Division of Biostatistics & Department of Applied Science, University of California, Davis

 

Collection: Computer Technologies and Information Sciences ; Biotechnology

 
73 Microarrays and the shadows in Plato's cave
 

Summary:  11 Microarrays and the shadows in Plato's cave Matthias E. Futschik Institute for Theoretical... ? Microarray data analysis: The way out of the cave and the challenges that we are meeting. Introduction... to microarray techniques: Experimental background Types of microarrays Microarray ...

  

Source: Futschik, Matthias E. - FachInstitut Theoretische Biologie, Humboldt-Universität zu Berlin

 

Collection: Biology and Medicine

 
74 ORNL 2010-G00616/jcn UT-B ID 200101009
 

Summary:  ORNL 2010-G00616/jcn UT-B ID 200101009 Automated Sampling for Microarray Readout Using Electrospray... Mass Spectrometry Technology Summary The growth of the microarray market has been limited by detection... are then transferred for analysis by mass spectroscopy. When this approach is applied to sampling protein microarrays

  

Source: Controlled Fusion Atomic Data Center (CFADC)

 

Collection: Plasma Physics and Fusion

 
75 OAK RIDGE NATIONAL LABORATORY U. S. DEPARTMENT OF ENERGY
 

Summary:  ) Multiple Design Criteria Improve Environmental Microarray Probe Selection and Specificity Contact: Chris... #12;OAK RIDGE NATIONAL LABORATORY U. S. DEPARTMENT OF ENERGY Microarrays are useful for environmental... . The gene probes on such microarrays have to be able to distinguish between thousands of closely related

  

Source: Oak Ridge National Laboratory Fossil Energy Program

 

Collection: Fossil Fuels

 
76 CLIP-CHIPTM, a Dedicated Microarray of All Proteases and Inhibitors
 

Summary:  CLIP-CHIPTM, a Dedicated Microarray of All Proteases and Inhibitors The CLIP-CHIP is a customized... 70mer oligonucleotide based microarray containing all human proteases (558) and inhibitors (157... , such as genes implicated in specific cancers, may be included in CLIP-CHIPTM microarrays. ·The CLIP

  

Source: Michelson, David G. - Department of Electrical and Computer Engineering, University of British Columbia

 

Collection: Engineering

 
77 A 666 VOLUME 112 | NUMBER 12 | August 2004 Environmental Health Perspectives Microarray Data Standards
 

Summary:  A 666 VOLUME 112 | NUMBER 12 | August 2004 · Environmental Health Perspectives Microarray Data... ), and the National Center for Biotechnology Information (NCBI). Similarly, we, the members of the Microarray Gene... should now require the submission of microarray data to public repositories as part of the process

  

Source: Sherlock, Gavin - Department of Genetics, Stanford University

 

Collection: Biology and Medicine

 
78 Abstract--The up-to-date segmentation techniques and software programs for microarray image segmentation require
 

Summary:  Abstract--The up-to-date segmentation techniques and software programs for microarray image... reached during microarray experiments. In this paper, an automatic approach for segmenting microarray... spots of various shapes and intensities. Index Terms -- Microarrays, Image Analysis, Segmentation I

  

Source: Athens, University of - Department of Informatics and Telecommunications, Real-Time Systems and Image Analysis Lab

 

Collection: Computer Technologies and Information Sciences

 
79 TRENDS in Cell Biology Vol.12 No.10 October 2002 http://tcb.trends.com 0962-8924/02/$ see front matter 2002 Elsevier Science Ltd. All rights reserved. PII: S0962-8924(02)02354-1
 

Summary:  -throughput mass spectrometry [2] and protein microarrays [3] allow the rapid systemic quantitation of m... and Sabatini have recently described a novel cell-based microarray system for identifying the cellular... functions of gene products [4]. Such `cell microarrays'have features (`spots') that are clusters

  

Source: Sabatini, David M. - Whitehead Institute for Biomedical Research & Department of Biology, Massachusetts Institute of Technology (MIT)

 

Collection: Biology and Medicine

 
80 Research article Dosage compensation is less effective in birds than in mammals
 

Summary:  November 2006 Affymetrix annotations based on release 2.1 of the chicken genome [45]. Genes assigned... in the number of Z chromosomes. Results: Using microarray analysis, we compared the male:female ratio... first constructed a small cDNA microarray for the zebra finch with probes for A and Z genes

  

Source: McQueen, Heather - School of Biological Sciences, University of Edinburgh

 

Collection: Biology and Medicine


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81 INTRODUCTION ICROARRAY technology is the most powerful tool to
 

Summary:  gene activities. Analysis of microarray genetic data has already allowed a better understanding... microarray data clustering can be summarised in the following steps: 1) Pre-processing. Since gene expression... coefficients for the microarray model. Then vector quantisation allows the clustering of the resultant

  

Source: Nebel, Jean-Christophe - School of Computing and Information Systems, Kingston University

 

Collection: Computer Technologies and Information Sciences

 
82 A Precise and Automatic Gridding Approach to Noise-Affected and Distorted Microarray Images
 

Summary:  A Precise and Automatic Gridding Approach to Noise-Affected and Distorted Microarray Images Eleni... -automatic approach to the determination of the grid alignment (Gridding) on microarray images is presented... as to images containing spots with various intensities. 1. Introduction Over the last decades, cDNA microarrays

  

Source: Athens, University of - Department of Informatics and Telecommunications, Real-Time Systems and Image Analysis Lab

 

Collection: Computer Technologies and Information Sciences

 
83 It is only the beginning: Putting microarrays into context
 

Summary:  1 It is only the beginning: Putting microarrays into context Matthias E. Futschik Institute... Medical expert knowledgeknowledge MicroarraysMicroarraysDNADNA Chromosomal LocationChromosomal Location #12... et al, Science, 2001 · Study of yeast galactose-utilisation pathway · Use of microarrays, quantative

  

Source: Futschik, Matthias E. - FachInstitut Theoretische Biologie, Humboldt-Universität zu Berlin

 

Collection: Biology and Medicine

 
84 Letter to the Editor Make Microarray Data with Known Ratios
 

Summary:  Letter to the Editor Make Microarray Data with Known Ratios A. Malcolm Campbell,* William T... .bio.davidson.edu/projects/GCAT/Spot_synthe- sizer/Spot_synthesizer.html) that permits faculty to gener- ate simulated DNA microarray data for use... Risi et al. (1997), DNA microarrays have become an increasingly powerful and popular ...

  

Source: Campbell, A. Malcolm - Biology Department, Davidson College

 

Collection: Multidisciplinary Databases and Resources ; Biology and Medicine

 
85 Introduction to DNA Microarray Technologies
 

Summary:  Introduction to DNA Microarray Technologies Sandrine Dudoit, Robert Gentleman, Rafael Irizarry... · Basic principles · Spotted DNA microarrays · Affymetrix oligonucleotide chips #12;DNA microarrays #12... ;DNA microarrays DNA microarrays rely on the hybridization properties of nucleic ...

  

Source: Dai, Yang - Department of Bioengineering, University of Illinois at Chicago

 

Collection: Engineering ; Biotechnology

 
86 An oligonucleotide microarray for microRNA expression analysis based on labeling RNA
 

Summary:  An oligonucleotide microarray for microRNA expression analysis based on labeling RNA with quantum... RNAs. We report a novel miRNA profiling microarray, in which miRNAs were directly labeled at the 30... RNAs through streptavidin­biotin interac- tion. The detection limit of this microarray for miRNA was $0.4 fmol

  

Source: Tian, Weidong - Institute of Biochemistry and Cell Biology, Shanghai Institute of Biological Sciences

 

Collection: Biology and Medicine

 
87 Proceedings of Student/Faculty Research Day, CSIS, Pace University, May 6th, 2005 Microarray Cancer Data Visualization: A Comparative Study
 

Summary:  Proceedings of Student/Faculty Research Day, CSIS, Pace University, May 6th, 2005 Microarray Cancer... Expression cancer gene analysis using microarrays now offer unprecedented opportunities to obtain molecular... ]. DNA microarray technologies allow measurement of mRNA expression levels for tens of thousands of genes

  

Source: Tappert, Charles - Department of Computer Science, Pace University

 

Collection: Computer Technologies and Information Sciences

 
88 Microarray truths and consequences , C H Woelk1
 

Summary:  REVIEW Microarray truths and consequences R Sásik1 , C H Woelk1 and J Corbeil1,2 1 School... : jcorbeil@ucsd.edu) Abstract For many, analysis of a microarray experiment starts with a spreadsheet... for most of the popular microarray platforms in use today. Journal of Molecular Endocrinology (2004) 33, 1

  

Source: Šášik, Roman - Department of Pathology, University of California San Diego

 

Collection: Biology and Medicine

 
89 Modeling and Estimation for Real-Time Microarrays HARIS VIKALOa
 

Summary:  Modeling and Estimation for Real-Time Microarrays HARIS VIKALOa BABAK HASSIBIb ARJANG HASSIBIa... Microarrays are used for collecting information about a large number of different genomic particles si... - multaneously. Conventional fluorescent-based microarrays acquire data after the hybridization phase. Dur- ing

  

Source: Vikalo, Haris - Department of Electrical and Computer Engineering, University of Texas at Austin

 

Collection: Engineering

 
90 Positional artifacts in microarrays: experimental verification and construction of COP,
 

Summary:  Positional artifacts in microarrays: experimental verification and construction of COP... ABSTRACT Microarray technology is currently one of the most widely-used technologies in biology. Many... to show that there are two types of positional artifacts in microarray data introducing spurious

  

Source: Yu, Haiyuan - Department of Biological Statistics and Computational Biology, Cornell University

 

Collection: Biology and Medicine ; Biotechnology

 
91 Positional artifacts in microarrays: experimental verification and construction of COP,
 

Summary:  Positional artifacts in microarrays: experimental verification and construction of COP... ABSTRACT Microarray technology is currently one of the most widely-used technologies in biology. Many... to show that there are two types of positional artifacts in microarray data introducing spurious

  

Source: Gerstein, Mark - Department of Molecular Biophysics and Biochemistry, Yale University

 

Collection: Biology and Medicine ; Biotechnology

 
92 Chemical science news from across RSC Publishing. Instant insight: Disease snapshots
 

Summary:  of microarray technology for the fast detection and treatment of cancer and other diseases Detecting... of developing a more targeted approach to patient therapy, and monitoring response to treatment. Microarrays... ;"Microarray-based techniques have become the leading technique for the high-throughput monitoring

  

Source: Corn, Robert M.- Department of Chemistry, University of California, Irvine

 

Collection: Chemistry

 
93 Recent advances of protein microarrays Claus Hultschig, Ju rgen Kreutzberger, Harald Seitz, Zolta n Konthur,
 

Summary:  Recent advances of protein microarrays Claus Hultschig, Ju¨ rgen Kreutzberger, Harald Seitz, Zolta... greatly advanced the field of protein microarrays. Over the past two years, different types of protein... microarrays have been used for serum profiling, protein abundance determinations, and identification

  

Source: Konthur, Zoltán - Max-Planck-Institut für molekulare Genetik

 

Collection: Biology and Medicine

 
94 The Stanford Microarray Database accommodates additional microarray platforms and data formats
 

Summary:  The Stanford Microarray Database accommodates additional microarray platforms and data formats... Received September 3, 2004; Accepted September 13, 2004 ABSTRACT The Stanford Microarray Database (SMD... by providing unrest- ricted access to microarray data published by SMD users and by disseminating its ...

  

Source: Sherlock, Gavin - Department of Genetics, Stanford University

 

Collection: Biology and Medicine

 
95 DNA Microarray Wet Lab Simulation Brings Genomics into the High School Curriculum
 

Summary:  Article DNA Microarray Wet Lab Simulation Brings Genomics into the High School Curriculum A... developed a wet lab DNA microarray simulation as part of a complete DNA microarray module for high school... prelab introductory materials (e.g., a paper microarray activity), the student handouts, teachers notes

  

Source: Campbell, A. Malcolm - Biology Department, Davidson College

 

Collection: Multidisciplinary Databases and Resources ; Biology and Medicine

 
96 A PROBABILISTIC MODEL FOR INHERENT NOISE AND SYSTEMATIC ERRORS OF MICROARRAYS
 

Summary:  A PROBABILISTIC MODEL FOR INHERENT NOISE AND SYSTEMATIC ERRORS OF MICROARRAYS Arjang Hassibia... for the measurement noise in microarray systems is presented. This model includes the inherent Poisson noise... of the assay, as well as the systematic errors which are typically introduced during microarray fabrication

  

Source: Lee, Thomas H. - Department of Electrical Engineering, Stanford University

 

Collection: Engineering

 
97 A Filtration-Based Protein Microarray Technique Yangqing Xu and Gang Bao*
 

Summary:  A Filtration-Based Protein Microarray Technique Yangqing Xu and Gang Bao* Department of Biomedical... Engineering, Georgia Institute of Technology and Emory University, Atlanta, Georgia 30332 Protein microarrays... , with the current design approaches, the overall performance of protein microarrays can be com- promised

  

Source: Bao, Gang - Department of Biomedical Engineering, Georgia Institute of Technology and Emory University

 

Collection: Engineering

 
98 Practical microarray analysis experimental design Heidelberg, October 2003 1
 

Summary:  Practical microarray analysis ­ experimental design Heidelberg, October 2003 1 Design of microarray... experiments Ulrich Mansmann mansmann@imbi.uni-heidelberg.de Practical microarray analysis October 2003... Heidelberg #12;Practical microarray analysis ­ experimental design Heidelberg, October 2003 2 ...

  

Source: Spang, Rainer - Computational Molecular Biology Group, Max-Planck-Institut für molekulare Genetik

 

Collection: Computer Technologies and Information Sciences ; Biotechnology ; Biology and Medicine

 
99 A CMOS Imager for DNA Detection Samir Parikh
 

Summary:  University of Toronto Abstract DNA Microarrays are used to analyse the DNA sequence of an organism... . These microarrays consist of many spots, one for each DNA section, that give off light in proportion... to the activation level of that DNA section. Microarray scanning equipment is used to determine light intensity

  

Source: Chow, Paul - Department of Electrical and Computer Engineering, University of Toronto

 

Collection: Computer Technologies and Information Sciences ; Engineering

 
100 Biomarker selection from microarray data: a transfer learning approach
 

Summary:  Biomarker selection from microarray data: a transfer learning approach Pierre... . Dupont (UCL Machine Learning Group) Microarray Transfer Learning October 02, 2009 1. Outline 1 Context... work with the "Microarray Team", especially with T. Helleputte P. Dupont (UCL Machine Learning Group

  

Source: Dupont, Pierre - Département d'ingénierie Informatique, Université Catholique de Louvain

 

Collection: Computer Technologies and Information Sciences


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