Collection Citation
| Collection Title | High-throughput Biological Data from the Experimental Data Management System (EDMS), Systems Biology, Pacific Northwest National Laboratory (PNNL) | ||
| Collection Sponsor | USDOE | ||
| Other Sponsors | PNNL Laboratory Directed Research and Development Program (LDRD) | ||
| Host Website | Pacific Northwest National Laboratory (PNNL) | ||
| Other Related Organizations | Pacific Northwest National Laboratory (PNNL) | ||
| Main Content Type | Numeric Files/Datasets; Specialized Mix | ||
| Subject Categories | 54 - ENVIRONMENTAL SCIENCES; 59 - BASIC BIOLOGICAL SCIENCES; 60 - APPLIED LIFE SCIENCES | ||
| Keywords | Multicellular networks; Biomarkers; Cell signaling; Oxidative stress and radiation; Biofilms; Shewanella Federation; Atmospheric Aerosol Chemistry; Systems Biology; Geochemistry; Biogeochemistry; Subsurface science; Interfacial Phenomena; Biological Interactions; Nanomaterials | ||
| Description | The EDMS is a web-based portal for the common storage, organization, and management of high-throughput biological data. EDMS has been developed as a part of internal research initiatives in Systems Biology and Data Intensive Computing at the Pacific Northwest National Laboratory (PNNL). The goal of the EDMS is to facilitate integrated data management across multiple programs at the Laboratory and secure data sharing with collaborators in the William R. Wiley Environmental Molecular Sciences Laboratory (EMSL) user community. The database also provides a mechanism by which PNNL scientists can publicly disseminate published data for access by the greater scientific community. This database captures raw data alongside essential experimental metadata, thereby allowing for query and merging of multifaceted data sets to provide insight into cellular function at a systems level that cannot otherwise be gained by indirect comparison. Registered users are able to define project teams of additional researchers who can view and supplement their experimental metadata, with restricted access controls for who can modify and delete data files. For open access to published data, public users are asked to register for a temporary password, but they will not be able to create Projects, store data, or view private (unpublished) data stored by registered users.[Taken from the Welcome text at https://biodemo.pnl.gov/biodemo/UserLoginPage.php?intended_path=index.php? Research activities at PNNL and EMSL that feed data to the EDMS include:
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| DDE Number | DDE00359 | ||
| Special Interface | Yes | ||
| Registration_Required | Yes |
