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Title: Thermodynamic and stochastic theory for nonequilibrium systems with multiple reactive intermediates: The concept and role of excess work

Journal Article · · Journal of Chemical Physics; (United States)
DOI:https://doi.org/10.1063/1.462445· OSTI ID:5573906
 [1]; ;  [2]
  1. Department of Chemistry, Stanford University, Stanford, California 94305 (United States)
  2. Department of Chemistry, Michigan State University, East Lansing, Michigan 48824 (United States)

We continue our development of a global thermodynamic and stochastic theory of open chemical systems far from equilibrium with an analysis of a broad class of isothermal, multicomponent reaction mechanisms with multiple steady states, studied under the assumption of local equilibrium. We generalize species-specific affinities of reaction intermediates, obtained in prior work for nonautocatalytic reaction mechanisms, to autocatalytic kinetics and define with these affinities an excess free energy differential F{phi}. The quantity F{phi} is the difference between the work required to reverse a spontaneous concentration change and the work available when the same concentration change is imposed on a system in a reference steady state. The integral of F{phi} is in general not a state function; in contrast, the function {phi}{sub det} obtained by integrating F{phi} along deterministic kinetic trajectories is a state function, as well as an identifiable term in the time-integrated dissipation. Unlike the total integrated dissipation, {phi}{sub det} remains finite during the infinite duration of the system's relaxation to a steady state and hence {phi}{sub det} can be used to characterize that process. The variational relation {delta}{phi}{ge}0 is shown to be a necessary and sufficient thermodynamic criterion for a stable steady state in terms of the excess work of displacement of the intermediates and {phi}{sub det} is a Liapunov function in the domain of attraction of such steady states. Based on these results and earlier work with nonautocatalytic and equilibrating systems, we hypothesize that the stationary distribution of the master equation may be obtained in the form {ital P}{sub {ital s}}=N exp({minus}{phi}{sub det}/{ital kT}) and provide an analytical argument for this form for macroscopic systems.

OSTI ID:
5573906
Journal Information:
Journal of Chemical Physics; (United States), Vol. 96:1; ISSN 0021-9606
Country of Publication:
United States
Language:
English