Efficient sampling of high-dimensional free energy landscapes using adaptive reinforced dynamics
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December 2021 |
DeePCG: Constructing coarse-grained models via deep neural networks
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July 2018 |
Terahertz field–induced ferroelectricity in quantum paraelectric SrTiO 3
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June 2019 |
Maximally localized Wannier functions: Theory and applications
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Deep neural network for the dielectric response of insulators
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July 2020 |
Polarization direction and stability in ferroelectric lead titanate thin films
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October 2009 |
Phase-Field Models for Microstructure Evolution
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August 2002 |
Generalized Langevin Equation as a Model for Barrier Crossing Dynamics in Biomolecular Folding
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January 2019 |
Non-Markovian out-of-equilibrium dynamics: A general numerical procedure to construct time-dependent memory kernels for coarse-grained observables
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November 2019 |
Dynamic force matching: A method for constructing dynamical coarse-grained models with realistic time dependence
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April 2015 |
Reduced-order models for coupled dynamical systems: Data-driven methods and the Koopman operator
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Chaos: An Interdisciplinary Journal of Nonlinear Science, Vol. 31, Issue 5
https://doi.org/10.1063/5.0039496
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May 2021 |
On representing chemical environments
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May 2013 |
Nucleation and growth mechanism of ferroelectric domain-wall motion
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October 2007 |
Intrinsic ripples in graphene
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September 2007 |
86 PFLOPS Deep Potential Molecular Dynamics simulation of 100 million atoms with ab initio accuracy
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February 2021 |
Computing the non-Markovian coarse-grained interactions derived from the Mori–Zwanzig formalism in molecular systems: Application to polymer melts
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January 2017 |
Coarse-Graining Methods for Computational Biology
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May 2013 |
Data-based parameter estimation of generalized multidimensional Langevin processes
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July 2007 |
Data-Driven Langevin Modeling of Nonequilibrium Processes
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July 2021 |
Variational Approach to Enhanced Sampling and Free Energy Calculations
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August 2014 |
Molecular dynamics on diffusive time scales from the phase-field-crystal equation
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March 2009 |
Modeling elastic and plastic deformations in nonequilibrium processing using phase field crystals
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November 2004 |
SchNet – A deep learning architecture for molecules and materials
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June 2018 |
Coarse-Graining in Polymer Simulation: From the Atomistic to the Mesoscopic Scale and Back
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September 2002 |
Time-Domain Methods for Diffusive Transport in Soft Matter
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January 2009 |
Stochastic molecular dynamics in systems with multiple time scales and memory friction
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Coarse-grained modelling out of equilibrium
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August 2022 |
Position-dependent diffusion coefficients and free energies from Bayesian analysis of equilibrium and replica molecular dynamics simulations
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November 1985 |
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April 2019 |
The long time behavior of Brownian motion in tilted periodic potentials
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March 2015 |
Phase-Field Method of Phase Transitions/Domain Structures in Ferroelectric Thin Films: A Review
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June 2008 |
Analysis of friction kernels for n-butane isomerization in water by the generalized Langevin equation
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Nuclear Quantum Effects in Solids Using a Colored-Noise Thermostat
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Atomistic Spin Dynamics: Foundations and Applications
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The fluctuation-dissipation theorem
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Epitaxial PbTiO3 Thin Films on SrTiO3(100) and SrRuO3/SrTiO3(100) Substrates Deposited by a Hydrothermal Method
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A microscopic theory for antiphase boundary motion and its application to antiphase domain coarsening
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Creep Motion of Elastic Interfaces Driven in a Disordered Landscape
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Langevin Equation with Colored Noise for Constant-Temperature Molecular Dynamics Simulations
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First-principles theory of ferroelectric phase transitions for perovskites: The case of
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Domain Formation and Domain Wall Motions in Ferroelectric BaTi Single Crystals
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Learning macroscopic internal variables and history dependence from microscopic models
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Generalized Neural-Network Representation of High-Dimensional Potential-Energy Surfaces
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The multi-dimensional generalized Langevin equation for conformational motion of proteins
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May 2019 |
Ab initio study of ferroelectric domain walls in
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Evolution of ferroelectricity in ultrathin PbTiO3 films as revealed by electric double layer gating
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Multidimensional Langevin Modeling of Nonoverdamped Dynamics
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July 2015 |
A Numerical Procedure to Evaluate Memory Effects in Non‐Equilibrium Coarse‐Grained Models
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Analysis of Financial Time Series
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Phase-field-crystal model for magnetocrystalline interactions in isotropic ferromagnetic solids
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Reinforced dynamics for enhanced sampling in large atomic and molecular systems
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Efficient stochastic thermostatting of path integral molecular dynamics
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Metadynamics: Metadynamics
- Barducci, Alessandro; Bonomi, Massimiliano; Parrinello, Michele
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Wiley Interdisciplinary Reviews: Computational Molecular Science, Vol. 1, Issue 5
https://doi.org/10.1002/wcms.31
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Physics of thin-film ferroelectric oxides
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Gaussian Approximation Potentials: The Accuracy of Quantum Mechanics, without the Electrons
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Position-dependent memory kernel in generalized Langevin equations: Theory and numerical estimation
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E(3)-equivariant graph neural networks for data-efficient and accurate interatomic potentials
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Memory kernels from molecular dynamics
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Generalized Langevin models of molecular dynamics simulations with applications to ion channels
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Extended generalized langevin equations: Calculation of the velocity autocorrelation function of a simple fluid
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