Engineering Cellular Metabolism
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journal
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March 2016 |
Engineering microbial pathways for production of bio-based chemicals from lignocellulosic sugars: current status and perspectives
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journal
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July 2020 |
Mutant phenotypes for thousands of bacterial genes of unknown function
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journal
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May 2018 |
Bioremediation 3 . 0 : Engineering pollutant-removing bacteria in the times of systemic biology
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journal
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November 2017 |
Removing environmental organic pollutants with bioremediation and phytoremediation
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journal
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February 2014 |
Distillery Stillage: Characteristics, Treatment, and Valorization
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journal
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June 2020 |
Valorizing a hydrothermal liquefaction aqueous phase through co-production of chemicals and lipids using the oleaginous yeast Yarrowia lipolytica
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journal
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October 2020 |
Valorization of Food and Agricultural Waste: A Step towards Greener Future
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journal
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December 2018 |
Lignin valorization through integrated biological funneling and chemical catalysis
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journal
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August 2014 |
Valorization of pyrolysis water: a biorefinery side stream, for 1,2-propanediol production with engineered Corynebacterium glutamicum
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journal
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November 2017 |
Evaluation of small organic acids present in fast pyrolysis bio‐oil from lignocellulose as feedstocks for bacterial bioconversion
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journal
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May 2019 |
Characterization of lignin monomers in low rank coal humic acids using the derivatization/reductive cleavage method
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journal
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September 2010 |
Biological approaches for treatment of distillery wastewater: A review
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journal
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September 2007 |
Opportunities and challenges in biological lignin valorization
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journal
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December 2016 |
Chemicals from lignin: an interplay of lignocellulose fractionation, depolymerisation, and upgrading
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journal
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January 2018 |
Recent advances in lignin valorization with bacterial cultures: microorganisms, metabolic pathways, and bio-products
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journal
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February 2019 |
Biotechnological Perspectives of Pyrolysis Oil for a Bio-Based Economy
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journal
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October 2017 |
Catalytic Fast Pyrolysis: A Review
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journal
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January 2013 |
Valorization of aqueous waste streams from thermochemical biorefineries
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journal
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January 2019 |
Aqueous Stream Characterization from Biomass Fast Pyrolysis and Catalytic Fast Pyrolysis
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journal
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September 2016 |
Characterization and Catalytic Upgrading of Aqueous Stream Carbon from Catalytic Fast Pyrolysis of Biomass
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journal
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November 2017 |
Drying and depolymerization technologies of Zhaotong lignite: A review
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journal
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April 2019 |
Analysis of chemical characteristics of lignite upgrading wastewater and its agricultural utilization
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journal
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April 2020 |
Plastic waste as a novel substrate for industrial biotechnology: Plastic waste as substrate for biotechnology
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journal
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August 2015 |
An engineered PET depolymerase to break down and recycle plastic bottles
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journal
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April 2020 |
Characterization and engineering of a two-enzyme system for plastics depolymerization
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journal
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September 2020 |
Defined Microbial Mixed Culture for Utilization of Polyurethane Monomers
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journal
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November 2020 |
Conversion of post consumer polyethylene to the biodegradable polymer polyhydroxyalkanoate
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journal
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January 2014 |
Development of a bioprocess to convert PET derived terephthalic acid and biodiesel derived glycerol to medium chain length polyhydroxyalkanoate
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May 2012 |
Waste paper for recycling: Overview and identification of potentially critical substances
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journal
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November 2015 |
A critical review on textile wastewater treatments: Possible approaches
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journal
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November 2016 |
Textile dye wastewater characteristics and constituents of synthetic effluents: a critical review
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journal
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November 2018 |
The effect of phenolic acids and molasses spent wash concentration on distillery wastewater remediation by fungi
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November 1998 |
Product based evaluation of pyrolysis of food waste and its digestate
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journal
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December 2015 |
Adipic acid production from lignin
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journal
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January 2015 |
Chasing bacterial chassis for metabolic engineering: a perspective review from classical to non-traditional microorganisms
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journal
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June 2018 |
Innovative Chemicals and Materials from Bacterial Aromatic Catabolic Pathways
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journal
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June 2019 |
From lignin to nylon: Cascaded chemical and biochemical conversion using metabolically engineered Pseudomonas putida
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journal
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May 2018 |
Fatty Acid and Alcohol Metabolism in Pseudomonas putida: Functional Analysis Using Random Barcode Transposon Sequencing
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journal
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October 2020 |
Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a Degrader of Lignin-Derived Biaryls and Monoaryls
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journal
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December 2011 |
Metabolic engineering of Corynebacterium glutamicum for the production of cis, cis-muconic acid from lignin
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journal
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July 2018 |
Multi-omic elucidation of aromatic catabolism in adaptively evolved Rhodococcus opacus
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journal
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September 2018 |
Towards lignin consolidated bioprocessing: simultaneous lignin depolymerization and product generation by bacteria
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journal
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January 2015 |
Base-Catalyzed Depolymerization of Solid Lignin-Rich Streams Enables Microbial Conversion
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journal
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August 2017 |
Thermochemical wastewater valorization via enhanced microbial toxicity tolerance
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journal
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January 2018 |
Bacterial contributions to delignification and lignocellulose degradation in forest soils with metagenomic and quantitative stable isotope probing
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journal
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September 2018 |
Removal of aromatic inhibitors produced from lignocellulosic hydrolysates by Acinetobacter baylyi ADP1 with formation of ethanol by Kluyveromyces marxianus
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journal
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April 2019 |
Better together: engineering and application of microbial symbioses
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journal
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December 2015 |
Synthetic microbial communities of heterotrophs and phototrophs facilitate sustainable growth
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journal
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July 2020 |
Modeling microbial communities from atrazine contaminated soils promotes the development of biostimulation solutions
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journal
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October 2018 |
Microbial mutualism dynamics governed by dose-dependent toxicity of cross-fed nutrients
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journal
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November 2016 |
SEVA 3.0: an update of the Standard European Vector Architecture for enabling portability of genetic constructs among diverse bacterial hosts
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journal
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November 2019 |
Bacterial Genetic Engineering by Means of Recombineering for Reverse Genetics
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journal
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September 2020 |
Improved bacterial recombineering by parallelized protein discovery
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journal
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May 2020 |
Development of a high efficiency integration system and promoter library for rapid modification of Pseudomonas putida KT2440
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journal
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December 2017 |
Genome editing with CRISPR–Cas nucleases, base editors, transposases and prime editors
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journal
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June 2020 |
Enabling genetic analysis of diverse bacteria with Mobile-CRISPRi
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journal
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January 2019 |
A decade of advances in transposon-insertion sequencing
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journal
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June 2020 |
Multifunctional SEVA shuttle vectors for actinomycetes and Gram‐negative bacteria
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journal
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March 2020 |
The future of metabolic engineering and synthetic biology: Towards a systematic practice
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journal
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May 2012 |
Development of a Method for Markerless Gene Deletion in Pseudomonas putida
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journal
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June 2011 |
Extending the Host Range of Bacteriophage Particles for DNA Transduction
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journal
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June 2017 |
Programming Bacteriophages by Swapping Their Specificity Determinants
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journal
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December 2015 |
CRISPR-Enabled Tools for Engineering Microbial Genomes and Phenotypes
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journal
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July 2018 |
Accelerated genome engineering of Pseudomonas putida by I‐ Sce I―mediated recombination and CRISPR ‐Cas9 counterselection
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journal
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March 2019 |
Unconstrained genome targeting with near-PAMless engineered CRISPR-Cas9 variants
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journal
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March 2020 |
Recent Advances of CRISPR/Cas9-Based Genetic Engineering and Transcriptional Regulation in Industrial Biology
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journal
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January 2020 |
Rapid Quantification of Mutant Fitness in Diverse Bacteria by Sequencing Randomly Bar-Coded Transposons
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journal
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May 2015 |
Rapid, Parallel Identification of Catabolism Pathways of Lignin-Derived Aromatic Compounds in Novosphingobium aromaticivorans
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journal
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September 2018 |
Perturbation of the metabolic network in Salmonella enterica reveals cross-talk between coenzyme A and thiamine pathways
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journal
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May 2018 |
Eliminating a global regulator of carbon catabolite repression enhances the conversion of aromatic lignin monomers to muconate in Pseudomonas putida KT2440
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journal
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December 2017 |
Mixed carbon substrates: a necessary nuisance or a missed opportunity?
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journal
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April 2020 |
Metabolic pathway balancing and its role in the production of biofuels and chemicals
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journal
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June 2015 |
Carbon catabolite repression in bacteria: many ways to make the most out of nutrients
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journal
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August 2008 |
Engineering E. coli for simultaneous glucose–xylose utilization during methyl ketone production
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journal
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January 2018 |
Protein post-translational modifications in bacteria
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journal
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September 2019 |
Characterizing posttranslational modifications in prokaryotic metabolism using a multiscale workflow
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journal
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October 2018 |
Cofactor Engineering for Enhancing the Flux of Metabolic Pathways
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journal
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August 2014 |
Enhancing muconic acid production from glucose and lignin-derived aromatic compounds via increased protocatechuate decarboxylase activity
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journal
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December 2016 |
Cofactor engineering for more efficient production of chemicals and biofuels
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journal
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December 2017 |
Cofactor engineering to regulate NAD+/NADH ratio with its application to phytosterols biotransformation
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journal
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October 2017 |
The Metabolic Redox Regime of Pseudomonas putida Tunes Its Evolvability toward Novel Xenobiotic Substrates
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journal
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August 2018 |
Genome reduction boosts heterologous gene expression in Pseudomonas putida
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journal
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January 2015 |
Pseudomonas 2.0: genetic upgrading of P. putida KT2440 as an enhanced host for heterologous gene expression
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journal
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November 2014 |
The metabolic cost of flagellar motion in P seudomonas putida KT2440 : Cost vs. benefit of
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journal
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November 2013 |
Deletion of genomic islands in the Pseudomonas putida KT2440 genome can create an optimal chassis for synthetic biology applications
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journal
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March 2020 |
Dynamic allocation of orthogonal ribosomes facilitates uncoupling of co-expressed genes
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journal
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February 2018 |
Dynamic metabolic control: towards precision engineering of metabolism
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journal
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January 2018 |
Programming mRNA decay to modulate synthetic circuit resource allocation
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journal
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April 2017 |
Horizontal transfer of a pathway for coumarate catabolism unexpectedly inhibits purine nucleotide biosynthesis
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journal
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October 2019 |
Reactive Enamines and Imines In Vivo: Lessons from the RidA Paradigm
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journal
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October 2019 |
How formaldehyde reacts with amino acids
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journal
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November 2019 |
Metabolite Damage and Metabolite Damage Control in Plants
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journal
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April 2016 |
A comparative view of metabolite and substrate stress and tolerance in microbial bioprocessing: From biofuels and chemicals, to biocatalysis and bioremediation
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journal
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July 2010 |
RND efflux pumps in Gram-negative bacteria; regulation, structure and role in antibiotic resistance
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journal
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January 2020 |
Multidrug efflux pumps of Gram-positive bacteria
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journal
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July 2016 |
Adaptive laboratory evolution of tolerance to dicarboxylic acids in Saccharomyces cerevisiae
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journal
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December 2019 |
Mechanisms of solvent resistance mediated by interplay of cellular factors in Pseudomonas putida
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journal
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April 2015 |
Solvent tolerance in Gram-negative bacteria
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journal
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June 2012 |
Addressing the role of the extrusion pump-bearing pGRT1 plasmid in toluene biodegradation by Pseudomonas putida DOT-T1E under real case scenarios
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journal
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November 2009 |
Engineering of Pseudomonas taiwanensis VLB120 for Constitutive Solvent Tolerance and Increased Specific Styrene Epoxidation Activity
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journal
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August 2014 |
Minimal Functions and Physiological Conditions Required for Growth of Salmonella enterica on Ethanolamine in the Absence of the Metabolosome
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journal
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November 2005 |
Bacterial microcompartments: widespread prokaryotic organelles for isolation and optimization of metabolic pathways: Bacterial microcompartments
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journal
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August 2015 |
Bacterial microcompartments: catalysis-enhancing metabolic modules for next generation metabolic and biomedical engineering
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journal
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October 2019 |
Outer membrane vesicles catabolize lignin-derived aromatic compounds in Pseudomonas putida KT2440
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journal
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April 2020 |
Metabolic engineering of Escherichia coli for the utilization of ethanol
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journal
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January 2020 |
Comparative transcriptomics elucidates adaptive phenol tolerance and utilization in lipid-accumulating Rhodococcus opacus PD630
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journal
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February 2016 |
Physiological responses of Pseudomonas putida to formaldehyde during detoxification: Microarrays revealed P. putida responses to toxins
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journal
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December 2007 |
Lipid metabolism of phenol-tolerant Rhodococcus opacus strains for lignin bioconversion
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journal
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December 2018 |
Engineering membrane and cell-wall programs for tolerance to toxic chemicals: Beyond solo genes
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journal
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October 2016 |
Engineering Escherichia coli membrane phospholipid head distribution improves tolerance and production of biorenewables
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journal
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November 2017 |
Reverse engineering of fatty acid-tolerant Escherichia coli identifies design strategies for robust microbial cell factories
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journal
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September 2020 |
Engineering alcohol tolerance in yeast
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journal
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October 2014 |
Hidden resources in the Escherichia coli genome restore PLP synthesis and robust growth after deletion of the essential gene pdxB
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journal
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November 2019 |
Shining a light on enzyme promiscuity
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journal
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December 2017 |
Metabolite Repair Enzymes Control Metabolic Damage in Glycolysis
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journal
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March 2020 |
Metabolite damage and its repair or pre-emption
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journal
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January 2013 |
Recent advances in the reconstruction of metabolic models and integration of omics data
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journal
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October 2014 |
Multiple High-Throughput Analyses Monitor the Response of E. coli to Perturbations
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journal
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April 2007 |
Current status and applications of genome-scale metabolic models
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journal
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June 2019 |
Using Genome-scale Models to Predict Biological Capabilities
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journal
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May 2015 |
A machine learning approach to predict metabolic pathway dynamics from time-series multiomics data
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journal
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May 2018 |
Machine and deep learning meet genome-scale metabolic modeling
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journal
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July 2019 |
The Escherichia coli transcriptome mostly consists of independently regulated modules
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journal
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December 2019 |
Machine learning for metabolic engineering: A review
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journal
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January 2021 |
Machine Learning for High-Throughput Stress Phenotyping in Plants
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journal
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February 2016 |
A White-Box Machine Learning Approach for Revealing Antibiotic Mechanisms of Action
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journal
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May 2019 |