skip to main content
OSTI.GOV title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: Fusion and fission events regulate endosome maturation and viral escape

Journal Article · · Scientific Reports
 [1];  [2];  [3];  [4]
  1. Universidad Pontificia Comillas, Madrid (Spain)
  2. University of Leeds (United Kingdom)
  3. Univ. Medical Center Groningen (Netherlands)
  4. University of Leeds (United Kingdom); Los Alamos National Lab. (LANL), Los Alamos, NM (United States)

Endosomes are intracellular vesicles that mediate the communication of the cell with its extracellular environment. They are an essential part of the cell’s machinery regulating intracellular trafficking via the endocytic pathway. Many viruses, which in order to replicate require a host cell, attach themselves to the cellular membrane; an event which usually initiates uptake of a viral particle through the endocytic pathway. In this way viruses hijack endosomes for their journey towards intracellular sites of replication and avoid degradation without host detection by escaping the endosomal compartment. Recent experimental techniques have defined the role of endosomal maturation in the ability of enveloped viruses to release their genetic material into the cytoplasm. Endosome maturation depends on a family of small hydrolase enzymes (or GTPases) called Rab proteins, arranged on the cytoplasmic surface of its membrane. Here, we model endosomes as intracellular compartments described by two variables (its levels of active Rab5 and Rab7 proteins) and which can undergo coagulation (or fusion) and fragmentation (or fission). The key element in our approach is the “per-cell endosomal distribution” and its dynamical (Boltzmann) equation. The Boltzmann equation allows us to derive the dynamics of the total number of endosomes in a cell, as well as the mean and the standard deviation of its active Rab5 and Rab7 levels. We compare our mathematical results with experiments of Dengue viral escape from endosomes. The relationship between endosomal active Rab levels and pH suggests a mechanism that can account for the observed variability in viral escape times, which in turn regulate the viability of a viral intracellular infection.

Research Organization:
Los Alamos National Lab. (LANL), Los Alamos, NM (United States)
Sponsoring Organization:
USDOE; Ministerio de Economía y Competitividad; European Union (EU)
Grant/Contract Number:
89233218CNA000001; PID2019-106339GB-I00; PIRSES-GA-2012-317893
OSTI ID:
1807877
Report Number(s):
LA-UR-21-20678
Journal Information:
Scientific Reports, Vol. 11, Issue 1; ISSN 2045-2322
Publisher:
Nature Publishing GroupCopyright Statement
Country of Publication:
United States
Language:
English

References (43)

A Conceptual Mathematical Model of the Dynamic Self-Organisation of Distinct Cellular Organelles journal December 2009
Molecular Mechanisms Involved in Antibody-Dependent Enhancement of Dengue Virus Infection in Humans: Antibody-Dependent Enhancement of Dengue Infection journal October 2012
Single-particle kinetics of influenza virus membrane fusion journal September 2008
Ligands for Clathrin-Mediated Endocytosis Are Differentially Sorted into Distinct Populations of Early Endosomes journal March 2006
Rab Conversion as a Mechanism of Progression from Early to Late Endosomes journal September 2005
Dynamics of Chikungunya Virus Cell Entry Unraveled by Single-Virus Tracking in Living Cells journal May 2016
A General Theoretical Framework to Infer Endosomal Network Dynamics from Quantitative Image Analysis journal August 2012
Chikungunya virus fusion properties elucidated by single-particle and bulk approaches journal August 2015
Sequential conformational rearrangements in flavivirus membrane fusion journal December 2014
Acidification of the Endocytic and Exocytic Pathways journal June 1986
Kinetic regulation of coated vesicle secretion journal September 2008
Viral escape from endosomes and host detection at a glance journal August 2018
Regulation of Organelle Acidity journal March 2001
Sheldon spectrum and the plankton paradox: two sides of the same coin—a trait-based plankton size-spectrum model journal May 2017
The enigmatic endosome – sorting the ins and outs of endocytic trafficking journal July 2018
Function and Regulation of the Endosomal Fusion and Fission Machineries journal March 2014
Rab 7: an important regulator of late endocytic membrane traffic. journal December 1995
A Hypothetical Model of Cargo-Selective Rab Recruitment During Organelle Maturation journal February 2012
Stochastic Model of Acidification, Activation of Hemagglutinin and Escape of Influenza Viruses from an Endosome journal June 2017
Rab5 regulates the kiss and run fusion between phagosomes and endosomes and the acquisition of phagosome leishmanicidal properties in RAW 264.7 macrophages journal October 2000
Endosome maturation: Endosome maturation journal August 2011
Rab7 Associates with Early Endosomes to Mediate Sorting and Transport of Semliki Forest Virus to Late Endosomes journal June 2005
Fusion leads to effective segregation of damage during cell division: An analytical treatment journal August 2015
Dengue virus life cycle: viral and host factors modulating infectivity journal April 2010
Dissecting the Cell Entry Pathway of Dengue Virus by Single-Particle Tracking in Living Cells journal December 2008
Membrane identity and GTPase cascades regulated by toggle and cut‐out switches journal January 2008
Rab5 is necessary for the biogenesis of the endolysosomal system in vivo journal May 2012
A DNA nanomachine that maps spatial and temporal pH changes inside living cells journal April 2009
Quantitative imaging of endosome acidification and single retrovirus fusion with distinct pools of early endosomes journal October 2012
An endosomal tether undergoes an entropic collapse to bring vesicles together journal August 2016
Rab Proteins and the Compartmentalization of the Endosomal System journal October 2014
Parameter estimation with bio-inspired meta-heuristic optimization: modeling the dynamics of endocytosis journal January 2011
Rab 5 Is Required for the Cellular Entry of Dengue and West Nile Viruses journal February 2007
The Guanine Nucleotide-Binding Switch in Three Dimensions journal November 2001
Influenza-virus membrane fusion by cooperative fold-back of stochastically induced hemagglutinin intermediates journal February 2013
Aggregation kinetics journal October 1992
Scaling in steady-state aggregation with injection journal March 2001
Rab proteins as membrane organizers journal February 2001
T cell and reticular network co-dependence in HIV infection journal April 2016
Tying trafficking to fusion and fission at the mighty mitochondria journal May 2018
Strong Inference in Mathematical Modeling: A Method for Robust Science in the Twenty-First Century journal July 2016
Rab GTPase regulation of membrane identity journal August 2013
The Yeast Endosomal Na + (K + )/H + Exchanger Nhx1 Regulates Cellular pH to Control Vesicle Trafficking journal March 2005

Similar Records

Lymphocytic choriomeningitis virus uses a novel endocytic pathway for infectious entry via late endosomes
Journal Article · Fri Aug 15 00:00:00 EDT 2008 · Virology · OSTI ID:1807877

IL4/PGE{sub 2} induction of an enlarged early endosomal compartment in mouse macrophages is Rab5-dependent
Journal Article · Sat Jul 15 00:00:00 EDT 2006 · Experimental Cell Research · OSTI ID:1807877

Interaction between VPS35 and RABG3f is necessary as a checkpoint to control fusion of late compartments with the vacuole
Journal Article · Mon Sep 30 00:00:00 EDT 2019 · Proceedings of the National Academy of Sciences of the United States of America · OSTI ID:1807877