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Title: Programming Amphiphilic Peptoid Oligomers for Hierarchical Assembly and Inorganic Crystallization

Journal Article · · Accounts of Chemical Research

Natural organisms make a wide variety of exquisitely complex, nano-, micro-, and macroscale structured materials in an energy-efficient and highly reproducible manner. During these processes, the information-carrying biomolecules (e.g., proteins, peptides, and carbohydrates) enable (1) hierarchical organization to assemble scaffold materials and execute high-level functions and (2) exquisite control over inorganic materials synthesis, generating biominerals whose properties are optimized for their functions. Inspired by nature, significant efforts have been devoted to developing functional materials that can rival those natural molecules by mimicking in vivo functions using engineered proteins, peptides, DNAs, sequence-defined synthetic molecules (e.g., peptoids), and other biomimetic polymers. Among them, peptoids, a new type of synthetic mimetics of peptides and proteins, have received particular attention because they combine the merits of both synthetic polymers (e.g., high chemical stability and efficient synthesis) and biomolecules (e.g., sequence programmability and biocompatibility). The lack of both chirality and hydrogen bonds in their backbone results in a highly designable peptoid-based system with reduced structural complexity and side chain-chemistry-dominated properties. Here in this Account, we present our recent efforts in this field by programming amphiphilic peptoid sequences for (1) the controlled self-assembly into different hierarchically structured nanomaterials with favorable properties and (2) manipulating inorganic (nano)crystal nucleation, growth, and assembly into superstructures. First, we designed a series of amphiphilic peptoids with controlled side chain chemistries that self-assembled into 1D highly stiff and dynamic nanotubes, 2D membrane-mimetic nanosheets, hexagonally patterned nanoribbons, and 3D nanoflowers. These crystalline nanostructures exhibited sequence-dependent properties and showed promise for different applications. The corresponding peptoid self-assembly pathways and mechanisms were also investigated by leveraging in situ atomic force microscopy studies and molecular dynamics simulations, which showed precise sequence dependency. Second, inspired by peptide- and protein-controlled formation of hierarchical inorganic nanostructures in nature, we developed peptoid-based biomimetic approaches for controlled synthesis of inorganic materials (e.g., noble metals and calcite), in which we took advantage of the substantial side chain chemistry of peptoids and investigated the relationship between the peptoid sequences and the morphology and growth kinetics of inorganic materials. For example, to overcome the challenges (e.g., complexity of protein- and peptide-folding, poor thermal and chemical stabilities) facing the area of protein- and peptide-controlled synthesis of inorganic materials, we recently reported the design of sequence-defined peptoids for controlled synthesis of highly branched plasmonic gold particles. Moreover, we developed a rule of thumb for designing peptoids that predictively enabled the morphological evolution from spherical to coral-shaped gold nanoparticles (NPs). With this Account, we hope to stimulate the research interest of chemists and materials scientists and promote the predictive synthesis of functional and robust materials through the design of sequence-defined synthetic molecules.

Research Organization:
Univ. of Washington, Seattle, WA (United States)
Sponsoring Organization:
USDOE Office of Science (SC), Basic Energy Sciences (BES)
Grant/Contract Number:
SC0019288; AC05-76RL01830
OSTI ID:
1781120
Journal Information:
Accounts of Chemical Research, Vol. 54, Issue 1; ISSN 0001-4842
Publisher:
American Chemical SocietyCopyright Statement
Country of Publication:
United States
Language:
English

References (51)

Engineered Biomimetic Polymers as Tunable Agents for Controlling CaCO3 Mineralization journal April 2011
Peptoids that mimic the structure, function, and mechanism of helical antimicrobial peptides journal February 2008
Crystallization Pathways in Biomineralization journal August 2011
Controlling protein assembly on inorganic crystals through designed protein interfaces journal July 2019
Nucleation of Crystals from Solution: Classical and Two-Step Models journal May 2009
Building two-dimensional materials one row at a time: Avoiding the nucleation barrier journal December 2018
Designed Peptoids as Tunable Modifiers of Zeolite Crystallization journal October 2017
Current challenges and future directions for bacterial self-healing concrete journal February 2018
Hierarchical Assembly of Peptoid‐Based Cylindrical Micelles Exhibiting Efficient Resonance Energy Transfer in Aqueous Solution journal August 2019
The physical properties of supramolecular peptide assemblies: from building block association to technological applications journal January 2014
Bioinspired Peptoid Nanotubes for Targeted Tumor Cell Imaging and Chemo‐Photodynamic Therapy journal August 2019
Design, Synthesis, Assembly, and Engineering of Peptoid Nanosheets journal January 2016
Simulations of Ovocleidin-17 Binding to Calcite Surfaces and Its Implications for Eggshell Formation journal March 2011
Peptoid nanosheets exhibit a new secondary-structure motif journal October 2015
Rigidification of Neutral Lipid Bilayers in the Presence of Salts journal October 2007
Guest Inclusion and Structural Dynamics in 2-D Hydrogen-Bonded Metal−Organic Frameworks journal December 2008
Programming biomolecular self-assembly pathways journal January 2008
Repair of tooth enamel by a biomimetic mineralization frontier ensuring epitaxial growth journal August 2019
Helical Peptoid Mimics of Magainin-2 Amide journal October 2003
Simple, Helical Peptoid Analogs of Lung Surfactant Protein B journal January 2005
Free-floating ultrathin two-dimensional crystals from sequence-specific peptoid polymers journal April 2010
Soft X-ray tomography of phenotypic switching and the cellular response to antifungal peptoids in Candida albicans journal October 2009
Peptide Nanotubes journal June 2014
Quantitative Evaluation of the Relative Cell Permeability of Peptoids and Peptides journal February 2007
Peptoid Polymers: A Highly Designable Bioinspired Material journal May 2013
Highly stable and self-repairing membrane-mimetic 2D nanomaterials assembled from lipid-like peptoids journal July 2016
Design and characterization of a microbial self-healing gel for enhanced oil recovery journal January 2017
A Readily Applicable Strategy to Convert Peptides to Peptoid-based Therapeutics journal March 2013
Designable and dynamic single-walled stiff nanotubes assembled from sequence-defined peptoids journal January 2018
Tunable assembly of biomimetic peptoids as templates to control nanostructure catalytic activity journal January 2018
Tuning calcite morphology and growth acceleration by a rational design of highly stable protein-mimetics journal September 2014
Calcium phosphates in biomedical applications: materials for the future? journal March 2016
Tuning crystallization pathways through sequence engineering of biomimetic polymers journal April 2017
Efficient method for the preparation of peptoids [oligo(N-substituted glycines)] by submonomer solid-phase synthesis journal December 1992
Role of molecular charge and hydrophilicity in regulating the kinetics of crystal growth journal December 2006
Interaction of Ethanol and Water with the {101̅4} Surface of Calcite journal September 2010
Solid‐phase synthesis of three‐armed star‐shaped peptoids and their hierarchical self‐assembly journal January 2019
Using Biomimetic Polymers in Place of Noncollagenous Proteins to Achieve Functional Remineralization of Dentin Tissues journal November 2017
Efficient Cytosolic Delivery Using Crystalline Nanoflowers Assembled from Fluorinated Peptoids journal November 2018
Biomimetic peptoid oligomers as dual-action antifreeze agents journal November 2012
Sequence Programmable Peptoid Polymers for Diverse Materials Applications journal April 2015
Self-Repair and Patterning of 2D Membrane-Like Peptoid Materials journal August 2016
Controlled synthesis of highly-branched plasmonic gold nanoparticles through peptoid engineering journal June 2018
Calcium Ions to Remotely Control the Reversible Switching of Secondary and Quaternary Structures in Bioconjugates journal April 2011
Surface-Engineered Dendrimers in Gene Delivery journal May 2015
Surface-Directed Assembly of Sequence-Defined Synthetic Polymers into Networks of Hexagonally Patterned Nanoribbons with Controlled Functionalities journal May 2016
Bioinspired structural materials journal October 2014
γ-AApeptides: Design, Structure, and Applications journal February 2016
A Universal Method for Detection of Amyloidogenic Misfolded Proteins journal May 2011
Peptoids and Polypeptoids at the Frontier of Supra- and Macromolecular Engineering journal December 2015
Thermodynamic and Kinetic Parameters for Calcite Nucleation on Peptoid and Model Scaffolds: A Step toward Nacre Mimicry journal April 2020