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Title: Consequences of environmental heterogeneity for the photosynthetic light environment of a tropical forest

Journal Article · · Agricultural and Forest Meteorology

We studied the interplay of atmospheric and canopy structure factors driving the canopy light environment (Photosynthetic Photon Flux Density, PPFD) in primary moist tropical forest in the Tapajós National Forest, Brazil. We quantified the temporal and spatial length scales that characterize intact rain forest inhomogeneities, asking: Are seasonal changes in the canopy radiation balance evident at these scales? We sought to describe the components of intensity, duration and spatial variation of within-canopy PPFD in light of these inhomogeneities. Do fluctuating atmospheric conditions, especially the presence of clouds and precipitation, affect the radiative inputs at both the canopy top and the forest floor? We examined the characteristic scales of heterogeneity in the vertical and the horizontal using a two-part approach. For radiation we combined long-term continuous high-frequency measurements of down- and up-welling short-wave and visible wavebands above the canopy with similarly frequent observations from a dense sensor network at forest floor. Vertical variations in canopy structure, obtained with a ground-based LIDAR, similarly combined intensive observations at the sensor network with occasional large-scale transects along the forest floor. Close similarities in both radiation and canopy structure at both scales support the representativeness of local observations of the wider area. A composite broadband measure similar to the Normalized Difference Vegetation Index (denoted cbNDVI) was constructed from above-canopy observations to compare with reports of remotely sensed canopy reflectivity at this site. We estimated the canopy Leaf Area Index (LAI) by combining observations of the variation in understory transmittance by solar elevation with a commonly-used algorithm. We obtained the conventional whole-canopy extinction coefficient, by applying the Beer-Lambert law. Over the course of a year this forest receives 11,795 mol m-2, only 62% of potential clear-day PPFD – atmospheric transmissivity is reduced by clouds, precipitation, smoke and haze. Very little PAR (≈ 2%) is reflected from the canopy and only 5.7% penetrates to 1 m above the forest floor - overall 92% of PAR is absorbed by the canopy. All radiation balance components closely tracked the dynamics of incoming light, showing little seasonal variation. Understory light observations across the 7.5–28.5 m spanning the understory array sensors showed essentially constant correlation between sensor pairs over time. There was a high degree of local persistence in the understory spatial pattern that varied slowly and directionally with the changing geometry of the sun and canopy structure. Over larger distances (to 1000 m), the patterns of spatial autocorrelation of understory PPFD and outer canopy structure were remarkably similar in shape, both declining rapidly to a more-or-less constant level around 15–20 m, a scale consistent with the dimensions of outer canopy crowns. The vertical pattern of transmission and absorption was estimated by combining understory transmittance with the distribution of canopy surface area obtained from the ground-based LIDAR system. It showed the maximum absorption relatively low in the canopy (8–19 m above ground). Although rather tall (canopy height is at 41.5 m), the extremely elaborate outer surface of the forest suggests the layers highest above ground are of little consequence to the PAR absorption budget. The cbNDVI measure exhibited seasonal variation consistent with other reports (somewhat higher in the wet season) but in contrast to a recent argument that the forest ‘greens up’ during the early dry season. However, except for the variations caused by the angle and intensity of incoming light modulated by atmospheric effects, there was little seasonality in the forest light environment at km67, including: canopy reflectances in several wavebands, all PPFD radiation budget components, the estimated LAI and mid-day PAR extinction coefficient and the length scales of understory PPFD. Canopy transmission was somewhat greater (6.4%) under diffuse skies compared to the least diffuse conditions (6.0%), and slightly more PPFD was absorbed under diffuse (92.7%) versus the least diffuse conditions (92.3%), but was not a significant contribution to the budget. The large diurnal variations in the extinction coefficient seriously affects its utility as a descriptor of canopy radiative properties. We propose an alternative approach for transmitted light: the canopy behaves as: 1.) a constant fraction filter under diffuse conditions, combined with 2.) a variable filter depending on solar elevation for sunfleck conditions. These regimes may be described with simple parameters each having mechanistic relations to canopy structure. In summary, we demonstrate that obtaining the radiation signal at forest floor at high data rate for long periods exploits seasonal sun angle changes to probe canopy structure. Combined with occasional long transect information, temporal and vertical sampling spatially allow improved definition of characteristic scales to describe both the understory light environment and canopy structure.

Research Organization:
State Univ. of New York (SUNY), Albany, NY (United States)
Sponsoring Organization:
USDOE; National Aeronautics and Space Administration (NASA)
Grant/Contract Number:
SC0011120; ER65583; NNG-06GE09A; NCC-5692
OSTI ID:
1769497
Alternate ID(s):
OSTI ID: 1680039
Journal Information:
Agricultural and Forest Meteorology, Journal Name: Agricultural and Forest Meteorology Vol. 278 Journal Issue: C; ISSN 0168-1923
Publisher:
ElsevierCopyright Statement
Country of Publication:
Netherlands
Language:
English

References (114)

Measurement of tropical rainforest three-dimensional light environment and its diurnal change journal November 2011
RadiaÇÃO Solar Total Dentro e fora de Floresta Tropical ÚMida de Terra Firme (TucuruÍ, ParÁ) journal September 1992
Medidas de radiação solar e índice de área foliar em coberturas vegetais journal March 1999
Statistical treatment of sunfleck length inside willow coppice journal August 2000
Sensitivity of Climate Simulations to Land-Surface and Atmospheric Boundary-Layer Treatments-A Review journal March 1993
Climatic variability and vegetation vulnerability in Amazônia journal January 2005
Gap formation and carbon cycling in the Brazilian Amazon: measurement using high-resolution optical remote sensing and studies in large forest plots journal July 2013
Forest structure and carbon dynamics in Amazonian tropical rain forests journal June 2004
Photosynthetic Light Environments in a Lowland Tropical Rain Forest in Costa Rica journal July 1984
Characteristics of shortwave and longwave irradiances under a Douglas-fir forest stand journal July 1991
Three-dimensional Structure of an Old-growth Pseudotsuga-Tsuga Canopy and Its Implications for Radiation Balance, Microclimate, and Gas Exchange journal May 2004
Radiação solar e distribuição vertical de área foliar em floresta - Reserva Biológica do Cuieiras ZF2, Manaus journal December 2005
Satellite-based modeling of gross primary production in a seasonally moist tropical evergreen forest journal January 2005
Instrument for Indirect Measurement of Canopy Architecture journal January 1991
Spatial and temporal variability of canopy structure in a tropical moist forest journal September 2001
Canopy light transmittance in Douglas-fir-western hemlock stands journal February 2002
Canopy reflectance, photosynthesis and transpiration journal August 1985
Three-dimensional mapping of light transmittance and foliage distribution using lidar journal October 2003
Radiation measurement for plant ecophysiology journal March 2003
Detecting rainfall interception in an Amazonian rain forest with eddy flux measurements journal October 2009
Canopy Damage and Recovery After Selective Logging in Amazonia: Field and Satellite Studies journal August 2004
Annual cycle of photosynthetically active radiation in maritime pine forest journal April 1998
Leaf Area Index and Above-Ground Biomass of terra firme Rain Forest and Adjacent Clearings in Amazonia journal June 1993
Parameterization of Canopy Structure and Leaf-Level Gas Exchange for an Eastern Amazonian Tropical Rain Forest (Tapajós National Forest, Pará, Brazil) journal October 2005
Biomass estimation in the Tapajos National Forest, Brazil journal December 2001
Photosynthetic sunfleck utilization potential of understory saplings growing under elevated CO2 in FACE journal February 2000
Spatial Heterogeneity of Light and Woody Seedling Regeneration in Tropical wet Forests journal September 1999
Carbon Balance and Vegetation Dynamics in an Old-Growth Amazonian Forest journal August 2004
Optically-based methods for measuring seasonal variation of leaf area index in boreal conifer stands journal July 1996
Biometric and Micrometeorological Measurements of Tropical Forest Carbon Balance journal August 2004
Seasonality of Water and heat Fluxes over a Tropical Forest in Eastern Amazonia journal August 2004
High temporal resolution NDVI phenology from micrometeorological radiation sensors journal November 1999
Effects of Season and Successional Stage on Leaf Area Index and Spectral Vegetation Indices in Three Mesoamerican Tropical Dry Forests1 journal December 2005
Cloud cover in Landsat observations of the Brazilian Amazon journal January 2001
Amazon forest carbon dynamics predicted by profiles of canopy leaf area and light environment journal September 2012
An improved FORTRAN program for the rapid calculation of the solar position journal January 1981
Amazon Forest Structure from IKONOS Satellite Data and the Automated Characterization of Forest Canopy Properties: Amazon Forest Structure journal September 2007
Spatial heterogeneity of a Scots pine canopy: an assessment by hemispherical photographs journal September 1996
Photosynthetically active radiation heterogeneity within a monodominant Congolese rain forest canopy journal June 2000
Drought Sensitivity of the Amazon Rainforest journal March 2009
Effect of smoke on subcanopy shaded light, canopy temperature, and carbon dioxide uptake in an Amazon rainforest: EFFECT OF SMOKE ON AN AMAZON FOREST journal July 2010
Variation in aboveground tree live biomass in a central Amazonian Forest: Effects of soil and topography journal October 2006
Seasonal balance and vertical pattern of photosynthetically active radiation within canopies of a tropical dry deciduous forest ecosystem in Mexico journal May 2005
Large seasonal swings in leaf area of Amazon rainforests journal March 2007
Tropical deforestation: Albedo and the surface-energy balance journal September 1991
The impact of diffuse sunlight on canopy light-use efficiency, gross photosynthetic product and net ecosystem exchange in three forest biomes: IMPACT OF DIFFUSE SUNLIGHT ON CANOPY LUE, GPP AND NEE journal January 2007
Seasonal leaf dynamics in an Amazonian tropical forest journal September 2009
Quantifying and Modelling the Effect of Cloud Shadows on the Surface Irradiance at Tropical and Midlatitude Forests journal October 2017
Canopy dynamics and light climates in a tropical moist deciduous forest in India journal February 1989
Dynamics of carbon, biomass, and structure in two Amazonian forests: CARBON DYNAMICS IN TWO AMAZONIAN FORESTS journal March 2008
Simplified estimate of leaf area index from transmittance of the sun's beam journal December 1987
A Survey of Ultraviolet-B Radiation in Forests journal December 1994
Interceptação de radiação solar e distribuição espacial de área foliar em floresta de terra firme da Amazônia Central, Brasil journal September 2000
Land-use change effects on local energy, water, and carbon balances in an Amazonian agricultural field: LAND-USE CHANGE EFFECTS IN AN AMAZONIAN AGRICULTURAL FIELD journal May 2004
Spatial and Temporal Patterns of Light and Canopy Structure in a Lowland Tropical Moist Forest journal December 1992
Cloud cover limits net CO2 uptake and growth of a rainforest tree during tropical rainy seasons journal January 2003
Amazon rain forest subcanopy flow and the carbon budget: Santarém LBA-ECO site: OBSERVING SUBCANOPY FLOWS IN THE AMAZON journal March 2008
The interpretation of spectral vegetation indexes journal March 1995
Light transmittance in forest canopies determined using airborne laser altimetry and in-canopy quantum measurements journal June 2001
Seasonal and interannual variability of climate and vegetation indices across the Amazon journal August 2010
Prediction of forest canopy light interception using three‐dimensional airborne LiDAR data journal December 2008
Ground-based measurements of leaf area index: a review of methods, instruments and current controversies journal September 2003
Amazon forests maintain consistent canopy structure and greenness during the dry season journal February 2014
Long-term variations in leaf area index and light extinction in a Fagus sylvatica stand as estimated from global radiation profiles journal August 2004
Light environment and carbon gain of understory herbs associated with sunflecks in a warm temperate deciduous forest in Japan journal August 1993
Lidar remote sensing for modeling gross primary production of deciduous forests journal August 2004
Improving the representation of radiation interception and photosynthesis for climate model applications journal January 2007
Landscape-scale evaluation of understory light and canopy structures: methods and application in a neotropical lowland rain forest journal May 1996
Amazon Forests Green-Up During 2005 Drought journal September 2007
Cloud modulation of surface solar irradiance at a pasture site in southern Brazil journal January 2001
Effects of short-term variation in weather on diurnal canopy CO2 flux and evapotranspiration of a juvenile douglas-fir stand journal April 1990
Radiation regime in a tropical dry deciduous forest in western Mexico journal January 1991
Spatial modelling of the fraction of photosynthetically active radiation absorbed by a boreal mixedwood forest using a lidar–hyperspectral approach journal November 2006
Influence of sunflecks on the temperature and water relations of two subalpine understory congeners journal November 1979
Observing the Whole-Canopy Short-Term Dynamic Response to Natural Step Changes in Incident Light: Characteristics of Tropical and Temperate Forests journal June 2019
Amazon rainforests green-up with sunlight in dry season journal January 2006
Ecological Research in the Large-Scale Biosphere– Atmosphere Experiment in Amazonia: Early Results journal August 2004
Forest Structure, Canopy Architecture, and Light Transmittance in Tropical wet Forests journal October 2001
Light Environment in Tropical Rain Forest of Central Amazonia journal August 1971
Tree damage, allometric relationships, and above-ground net primary production in central Amazon forest journal October 2001
Estimativas do albedo em três ecossistemas da floresta amazônica journal January 2002
A formula for average foliage density journal January 1967
Canopy structure measurement by gap fraction analysis using commercial instrumentation journal January 1996
Albedo model for a tropical dry deciduous forest in western Mexico journal June 1992
Boundary Layer Clouds and Vegetation–Atmosphere Feedbacks journal January 2001
Solar equivalent leaf area: an efficient biometrical parameter of individual leaves, trees and stands journal September 1989
Atenuação de radiação solar e distribuição vertical de área foliar em floresta - reserva Jaru - Rondônia, Brasil journal March 2001
Elevation-Relief Ratio, Hypsometric Integral, and Geomorphic Area-Altitude Analysis journal January 1971
Effects of sky brightness distribution upon penetration of diffuse radiation through canopy gaps in a deciduous forest journal November 1980
The canopy surface and stand development: assessing forest canopy structure and complexity with near-surface altimetry journal February 2004
Radar-observed spatial and temporal rainfall variability near the Tapajós-Amazon confluence journal December 2014
Seasonal variation in net carbon exchange and evapotranspiration in a Brazilian rain forest: a modelling analysis journal October 1998
Interpretation of variations in MODIS-measured greenness levels of Amazon forests during 2000 to 2009 journal May 2012
Dynamic response of microwave land surface properties to precipitation in Amazon rainforest journal June 2013
Scaling and elevation in river networks journal September 1989
Fast determination of light availability and leaf area index in tropical forests journal March 2002
Retrieval of vertical LAI profiles over tropical rain forests using waveform lidar at La Selva, Costa Rica journal September 2012
Calculating the position of the sun journal January 1978
Effect of smoke and clouds on the transmissivity of photosynthetically active radiation inside the canopy journal January 2006
Spatial autocorrelation of solar radiation in a tropical moist forest understory journal September 1990
Effects of light environment and successional status on lightfleck use by understory trees of temperate and tropical forests journal January 1996
Separating the diffuse and direct component of global radiation and its implications for modeling canopy photosynthesis Part I. Components of incoming radiation journal October 1986
Leaf-Area and Average Leaf Angle From Transmission of Direct Sunlight journal January 1986
EFFECTS OF METEOROLOGICAL VARIATIONS ON THE CO 2 EXCHANGE OF A BRAZILIAN TRANSITIONAL TROPICAL FOREST journal August 2004
Comprehensive assessment of carbon productivity, allocation and storage in three Amazonian forests journal May 2009
Light Intensity Measurements in Rain Forest Near Santarem, Brazil journal March 1958
Globally significant changes in biological processes of the Amazon Basin: results of the Large-scale Biosphere-Atmosphere Experiment: CHANGES IN AMAZON BASIN journal April 2004
A Comparison of Montane and Lowland Forest in Ecuador: III. The Light Reaching the Ground Vegetation journal March 1967
A portable LIDAR system for rapid determination of forest canopy structure: Portable LIDAR for canopy structure journal July 2004
Direct and Indirect Estimation of Leaf Area Index, fAPAR, and Net Primary Production of Terrestrial Ecosystems journal October 1999
Amazon forests did not green-up during the 2005 drought: AMAZON DROUGHT SENSITIVITY journal March 2010
Overview of the radiometric and biophysical performance of the MODIS vegetation indices journal November 2002
Seasonal variation of tropical forest LAI based on field measurements in Central African Republic journal November 2003
Carbon in Amazon Forests: Unexpected Seasonal Fluxes and Disturbance-Induced Losses journal November 2003

Figures / Tables (20)