Assessment of the Deepwater Horizon oil spill impact on Gulf coast microbial communities

Lamendella, Regina; Strutt, Steven; Borglin, Sharon; Chakraborty, Romy; Tas, Neslihan; Mason, Olivia U.; Hultman, Jenni; Prestat, Emmanuel; Hazen, Terry C.; Jansson, Janet K.

doi:10.3389/fmicb.2014.00130

Title: Assessment of the Deepwater Horizon oil spill impact on Gulf coast microbial communities

Journal Article · Thu Apr 03 00:00:00 EDT 2014 · Frontiers in Microbiology

DOI:https://doi.org/10.3389/fmicb.2014.00130· OSTI ID:1628106

Lamendella, Regina ^[1]; Strutt, Steven ^[2]; Borglin, Sharon ^[3]; Chakraborty, Romy ^[3]; Tas, Neslihan ^[3]; Mason, Olivia U. ^[4]; Hultman, Jenni ^[3]; Prestat, Emmanuel ^[3]; Hazen, Terry C. ^[5]; Jansson, Janet K. ^[6]

Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States). Earth Sciences Division. Ecology Dept.; Juniata College, Huntingdon, PA (United States) Biology Dept.
Juniata College, Huntingdon, PA (United States) Biology Dept.
Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States). Earth Sciences Division. Ecology Dept.
Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States). Earth Sciences Division. Ecology Dept.; Florida State Univ., Tallahassee, FL (United States). Dept. Earth, Ocean and Atompheric Science
Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States). Earth Sciences Division. Ecology Dept.; Univ. of Tennessee, Knoxville, TN (United States). Dept. of Civil and Environmental Engineering; Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States). Biosciences Division
Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States). Earth Sciences Division. Ecology Dept.; USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States)

One of the major environmental concerns of the Deepwater Horizon oil spill in the Gulf of Mexico was the ecological impact of the oil that reached shorelines of the Gulf Coast. Here we investigated the impact of the oil on the microbial composition in beach samples collected in June 2010 along a heavily impacted shoreline near Grand Isle, Louisiana. Successional changes in the microbial community structure due to the oil contamination were determined by deep sequencing of 16S rRNA genes. Metatranscriptomics was used to determine expression of functional genes involved in hydrocarbon degradation processes. In addition, potential hydrocarbon-degrading Bacteria were obtained in culture. The 16S data revealed that highly contaminated samples had higher abundances of Alpha- and Gammaproteobacteria sequences. Successional changes in these classes were observed over time, during which the oil was partially degraded. The metatranscriptome data revealed that PAH, n-alkane, and toluene degradation genes were expressed in the contaminated samples, with high homology to genes from Alteromonadales, Rhodobacterales, and Pseudomonales. Notably, Marinobacter (Gammaproteobacteria) had the highest representation of expressed genes in the samples. A Marinobacter isolated from this beach was shown to have potential for transformation of hydrocarbons in incubation experiments with oil obtained from the Mississippi Canyon Block 252 (MC252) well; collected during the Deepwater Horizon spill. The combined data revealed a response of the beach microbial community to oil contaminants, including prevalence of Bacteria endowed with the functional capacity to degrade oil.

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Research Organization:: Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)

Sponsoring Organization:: USDOE Office of Science (SC), Biological and Environmental Research (BER). Biological Systems Science Division

Grant/Contract Number:: AC02-05CH11231

OSTI ID:: 1628106

Journal Information:: Frontiers in Microbiology, Vol. 5; ISSN 1664-302X

Publisher:: Frontiers Research FoundationCopyright Statement

Country of Publication:: United States

Language:: English

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The metabolic pathways and environmental controls of hydrocarbon biodegradation in marine ecosystems Kostka, Joel E.; Teske, Andreas P.; Joye, Samantha B. Frontiers in Microbiology, Vol. 5 https://doi.org/10.3389/fmicb.2014.00471	journal	September 2014
The diversity of PAH-degrading bacteria in a deep-sea water column above the Southwest Indian Ridge Yuan, Jun Frontiers in Microbiology, Vol. 6 https://doi.org/10.3389/fmicb.2015.00853	journal	January 2015
Effect of Biostimulation Using Sewage Sludge, Soybean Meal, and Wheat Straw on Oil Degradation and Bacterial Community Composition in a Contaminated Desert Soil Al-Kindi, Sumaiya; Abed, Raeid M. M. Frontiers in Microbiology, Vol. 7 https://doi.org/10.3389/fmicb.2016.00240	journal	March 2016
Aurelia aurita Ephyrae Reshape a Coastal Microbial Community Zoccarato, Luca; Celussi, Mauro; Pallavicini, Alberto Frontiers in Microbiology, Vol. 7 https://doi.org/10.3389/fmicb.2016.00749	journal	May 2016
Chronic Polyaromatic Hydrocarbon (PAH) Contamination Is a Marginal Driver for Community Diversity and Prokaryotic Predicted Functioning in Coastal Sediments Jeanbille, Mathilde; Gury, Jérôme; Duran, Robert Frontiers in Microbiology, Vol. 7 https://doi.org/10.3389/fmicb.2016.01303	journal	August 2016
Acclimation of Culturable Bacterial Communities under the Stresses of Different Organic Compounds Wang, Hui; Zhang, Shuangfei; Pratush, Amit Frontiers in Microbiology, Vol. 9 https://doi.org/10.3389/fmicb.2018.00225	journal	February 2018
Microbial Metabolic Potential of Phenol Degradation in Wastewater Treatment Plant of Crude Oil Refinery: Analysis of Metagenomes and Characterization of Isolates Viggor, Signe; Jõesaar, Merike; Soares-Castro, Pedro Microorganisms, Vol. 8, Issue 5 https://doi.org/10.3390/microorganisms8050652	journal	April 2020
Responses of microbial community from tropical pristine coastal soil to crude oil contamination Morais, Daniel; Pylro, Victor; Clark, Ian M. PeerJ Preprints https://doi.org/10.7287/peerj.preprints.1254v1	posted_content	July 2015

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