Combining Next-Generation Sequencing and Microarray Technology into a Transcriptomics Approach for the Non-Model Organism Chironomus riparius
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journal
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October 2012 |
Metagenomic Sequencing for Surveillance of Food- and Waterborne Viral Diseases
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journal
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February 2017 |
SUPER-FOCUS: a tool for agile functional analysis of shotgun metagenomic data
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October 2015 |
More than 2500 years of oil exposure shape sediment microbiomes with the potential for syntrophic degradation of hydrocarbons linked to methanogenesis
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September 2017 |
Application of next-generation sequencing technologies in virology
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September 2012 |
Culture-enriched metagenomic sequencing enables in-depth profiling of the cystic fibrosis lung microbiota
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January 2020 |
Phylogenetic signal of genomic repeat abundances can be distorted by random homoplasy: a case study from hominid primates
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journal
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November 2018 |
Population Structure, Antibiotic Resistance, and Uropathogenicity of Klebsiella variicola
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December 2018 |
GenCoF: a graphical user interface to rapidly remove human genome contaminants from metagenomic datasets
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November 2018 |
Comparative Genomics Guides Elucidation of Vitamin B 12 Biosynthesis in Novel Human-Associated Akkermansia Strains
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journal
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January 2020 |
Potential role of viruses in white plague coral disease
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journal
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August 2013 |
From next-generation resequencing reads to a high-quality variant data set
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journal
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October 2016 |
Gene content of the fish-hunting cone snail Conus consors
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posted_content
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March 2019 |
Comparative Genomics of Wolbachia and the Bacterial Species Concept
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journal
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April 2013 |
Population structure of Neisseria gonorrhoeae based on whole genome data and its relationship with antibiotic resistance
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posted_content
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November 2014 |
Biological Soil Crusts from Different Soil Substrates Harbor Distinct Bacterial Groups with the Potential to Produce Exopolysaccharides and Lipopolysaccharides
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journal
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August 2019 |
Metagenomic and satellite analyses of red snow in the Russian Arctic
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journal
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January 2015 |
The Microbiome of Endophytic, Wood Colonizing Bacteria from Pine Trees as Affected by Pine Wilt Disease
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journal
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June 2017 |
A step ahead: Exploring the gut microbiota in inpatients with bipolar disorder during a depressive episode
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journal
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July 2018 |
A draft genome and transcriptome of common milkweed (Asclepias syriaca) as resources for evolutionary, ecological, and molecular studies in milkweeds and Apocynaceae
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posted_content
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April 2019 |
Reference-independent comparative metagenomics using cross-assembly: crAss
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journal
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October 2012 |
Speed, accuracy, sensitivity and quality control choices for detecting clinically relevant microbes in whole blood from patients
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posted_content
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February 2019 |
SAG-QC: quality control of single amplified genome information by subtracting non-target sequences based on sequence compositions
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journal
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March 2017 |
Using viromes to predict novel immune proteins in non-model organisms
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journal
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August 2016 |
Immunomics of the koala (Phascolarctos cinereus)
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journal
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March 2015 |
An introduction to the analysis of shotgun metagenomic data
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journal
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June 2014 |
Identification of a transient state during the acquisition of temozolomide resistance in glioblastoma
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journal
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January 2020 |
Fecal Metagenome Sequences from Lactating Dairy Cows Shedding Escherichia coli O157:H7
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journal
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November 2018 |
The Impact of the Diurnal Cycle on the Microbial Transcriptome in the Rhizosphere of Barley
|
journal
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November 2017 |
Deriving accurate microbiota profiles from human samples with low bacterial content through post-sequencing processing of Illumina MiSeq data
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journal
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May 2015 |
The microbiome of uncontacted Amerindians
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journal
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April 2015 |
Tracking microbial evolution in the human gut using Hi-C
|
journal
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March 2019 |
Alternative Growth Promoters Modulate Broiler Gut Microbiome and Enhance Body Weight Gain
|
journal
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October 2017 |
Draft Genome Sequence of Mycolicibacterium sp. Strain CH28, a Potential Degrader of Diisopropyl Ether, Isolated from Pharmaceutical Wastewater
|
journal
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September 2019 |
A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution
|
journal
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May 2016 |
The Human Skin Double-Stranded DNA Virome: Topographical and Temporal Diversity, Genetic Enrichment, and Dynamic Associations with the Host Microbiome
|
journal
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October 2015 |
Making big data smart—how to use metagenomics to understand soil quality
|
journal
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March 2017 |
De novo transcriptome assembly of the lobster cockroach Nauphoeta cinerea (Blaberidae)
|
journal
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July 2018 |
Diverse and Widespread Contamination Evident in the Unmapped Depths of High Throughput Sequencing Data
|
journal
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October 2014 |
Comparative transcriptomics of Entelegyne spiders (Araneae, Entelegynae), with emphasis on molecular evolution of orphan genes
|
journal
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April 2017 |
Bivalve transcriptomics reveal pathogen sequences and a powerful immune response of the Mediterranean mussel (Mytilus galloprovincialis)
|
journal
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March 2018 |
Developmental dynamics of the preterm infant gut microbiota and antibiotic resistome
|
journal
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March 2016 |
Patient‐derived xenograft models of non‐small cell lung cancer for evaluating targeted drug sensitivity and resistance
|
journal
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October 2019 |
Large-scale contamination of microbial isolate genomes by Illumina PhiX control
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journal
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March 2015 |
Pregnant women carrying microcephaly foetuses and Zika virus contain potentially pathogenic microbes and parasites in their amniotic fluid
|
journal
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January 2017 |
Seasonal cycling in the gut microbiome of the Hadza hunter-gatherers of Tanzania
|
journal
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August 2017 |
RefSeq database growth influences the accuracy of k-mer-based lowest common ancestor species identification
|
journal
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October 2018 |
Parasite infection of public databases: a data mining approach to identify apicomplexan contaminations in animal genome and transcriptome assemblies
|
journal
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January 2017 |
De novo transcriptome assembly for a non-model species, the blood-sucking bug Triatoma brasiliensis, a vector of Chagas disease
|
journal
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September 2014 |
Dominant Groups of Potentially Active Bacteria Shared by Barley Seeds become Less Abundant in Root Associated Microbiome
|
journal
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June 2017 |
Genome-wide association analysis identifies variation in vitamin D receptor and other host factors influencing the gut microbiota
|
journal
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October 2016 |
The influence of trematode parasite burden on gene expression in a mammalian host
|
journal
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August 2016 |
Transcriptome Analysis Identifies Candidate Genes Related to Triacylglycerol and Pigment Biosynthesis and Photoperiodic Flowering in the Ornamental and Oil-Producing Plant, Camellia reticulata (Theaceae)
|
journal
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February 2016 |
Characterization of antibiotic resistance and host-microbiome interactions in the human upper respiratory tract during influenza infection
|
journal
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March 2020 |
Differential gene expression in Varroa jacobsoni mites following a host shift to European honey bees (Apis mellifera)
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conference
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November 2015 |
From deep sequencing to viral tagging: Recent advances in viral metagenomics: Prospects & Overviews
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journal
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March 2013 |
The Regulation of Ruminal Short-Chain Fatty Acids on the Functions of Rumen Barriers
|
journal
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October 2019 |
De novo transcriptome assembly reveals high transcriptional complexity in Pisum sativum axillary buds and shows rapid changes in expression of diurnally regulated genes
|
journal
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March 2017 |
Effect of the Nursing Mother on the Gut Microbiome of the Offspring During Early Mouse Development
|
journal
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January 2019 |
From trash to treasure: detecting unexpected contamination in unmapped NGS data
|
journal
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April 2019 |
De Novo Assembly and Transcriptome Analysis of the Mediterranean Fruit Fly Ceratitis capitata Early Embryos
|
journal
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December 2014 |
A long-term field experiment demonstrates the influence of tillage on the bacterial potential to produce soil structure-stabilizing agents such as exopolysaccharides and lipopolysaccharides
|
journal
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March 2019 |
The clinically approved antiviral drug sofosbuvir inhibits Zika virus replication
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journal
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January 2017 |
Superficieibacter electus gen. nov., sp. nov., an Extended-Spectrum β-Lactamase Possessing Member of the Enterobacteriaceae Family, Isolated From Intensive Care Unit Surfaces
|
journal
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July 2018 |
Integrated metagenomic data analysis demonstrates that a loss of diversity in oral microbiota is associated with periodontitis
|
journal
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January 2017 |
From trash to treasure: detecting unexpected contamination in unmapped NGS data
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posted_content
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September 2017 |
Analysis and correction of compositional bias in sparse sequencing count data
|
journal
|
November 2018 |
Transcriptome Sequencing and Differential Gene Expression Analysis of Delayed Gland Morphogenesis in Gossypium australe during Seed Germination
|
journal
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September 2013 |
Bacterial Community Associated with the Reef Coral Mussismilia braziliensis's Momentum Boundary Layer over a Diel Cycle
|
journal
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May 2017 |
Algorithms and strategies in short-read shotgun metagenomic reconstruction of plant communities
|
journal
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March 2018 |
Ocean warming combined with lower omega-3 nutritional availability impairs the cardio-respiratory function of a marine fish
|
journal
|
January 2019 |
Microbiome of prebiotic-treated mice reveals novel targets involved in host response during obesity
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journal
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April 2014 |
An influential meal: host plant dependent transcriptional variation in the beet armyworm, Spodoptera exigua (Lepidoptera: Noctuidae)
|
journal
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November 2019 |
Breath gas metabolites and bacterial metagenomes from cystic fibrosis airways indicate active pH neutral 2,3-butanedione fermentation
|
journal
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January 2014 |
An acorn squash (Cucurbita pepo ssp. ovifera) fruit and seed transcriptome as a resource for the study of fruit traits in Cucurbita
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journal
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January 2015 |
An Extensive Evaluation of Read Trimming Effects on Illumina NGS Data Analysis
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text
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January 2013 |
Signatures within the esophageal microbiome are associated with host genetics, age, and disease
|
journal
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December 2018 |
A reference floral transcriptome of sexual and apomictic Paspalum notatum
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journal
|
April 2017 |
Shifts in reclamation management strategies shape the role of exopolysaccharide and lipopolysaccharide‐producing bacteria during soil formation
|
journal
|
August 2019 |
Warm Temperatures, Cool Sponges: The Effect of Increased Temperatures on the Antarctic Sponge Isodictya sp
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posted_content
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January 2019 |
Comparative transcriptomics reveal developmental turning points during embryogenesis of a hemimetabolous insect, the damselfly Ischnura elegans
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journal
|
October 2017 |
Understanding antimicrobial discovery and resistance from a metagenomic and metatranscriptomic perspective: advances and applications
|
journal
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February 2019 |
A rapid and label-free platform for virus capture and identification from clinical samples
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journal
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December 2019 |
Intraspecific DNA contamination distorts subtle population structure in a marine fish: Decontamination of herring samples before restriction‐site associated sequencing and its effects on population genetic statistics
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journal
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June 2019 |
Organic Amendments in a Long-term Field Trial—Consequences for the Bulk Soil Bacterial Community as Revealed by Network Analysis
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journal
|
November 2017 |
Comparative analysis of amplicon and metagenomic sequencing methods reveals key features in the evolution of animal metaorganisms
|
journal
|
September 2019 |
Inner workings of thrombolites: spatial gradients of metabolic activity as revealed by metatranscriptome profiling
|
journal
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July 2015 |
Metagenomic insights into the roles of Proteobacteria in the gastrointestinal microbiomes of healthy dogs and cats
|
journal
|
June 2018 |
Host-Microbe Interactions in the Chemosynthetic Riftia pachyptila Symbiosis
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journal
|
December 2019 |
Evolution at two time frames: polymorphisms from an ancient singular divergence event fuel contemporary parallel evolution
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posted_content
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February 2018 |
Gut microbiota, dietary intakes and intestinal permeability reflected by serum zonulin in women
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journal
|
July 2018 |
Amplicon pyrosequencing late Pleistocene permafrost: the removal of putative contaminant sequences and small‐scale reproducibility
|
journal
|
May 2013 |
The Autoimmune Ecology
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journal
|
April 2016 |
Buccal Swabbing as a Noninvasive Method To Determine Bacterial, Archaeal, and Eukaryotic Microbial Community Structures in the Rumen
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journal
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August 2015 |
Genome Assembly and Annotation of the Trichoplusia ni Tni-FNL Insect Cell Line Enabled by Long-Read Technologies
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journal
|
January 2019 |
The White-Nose Syndrome Transcriptome: Activation of Anti-fungal Host Responses in Wing Tissue of Hibernating Little Brown Myotis
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journal
|
October 2015 |
Madagascar ground gecko genome analysis characterizes asymmetric fates of duplicated genes
|
journal
|
April 2018 |
Evaluation of Mixotrophy-Associated Gene Expression in Two Species of Polar Marine Algae
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journal
|
August 2018 |
Comparison of De Novo Transcriptome Assemblers and k-mer Strategies Using the Killifish, Fundulus heteroclitus
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journal
|
April 2016 |
Decontaminating eukaryotic genome assemblies with machine learning
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journal
|
December 2017 |
Improving the quality of genome, protein sequence, and taxonomy databases: A prerequisite for microbiome meta-omics 2.0
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journal
|
September 2015 |
Whey protein effects on energy balance link the intestinal mechanisms of energy absorption with adiposity and hypothalamic neuropeptide gene expression
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journal
|
July 2017 |
ContEst16S: an algorithm that identifies contaminated prokaryotic genomes using 16S RNA gene sequences
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journal
|
June 2017 |
Species-Specific Viromes in the Ancestral Holobiont Hydra
|
journal
|
October 2014 |
Transcriptome-Stable Isotope Probing Provides Targeted Functional and Taxonomic Insights Into Microaerobic Pollutant-Degrading Aquifer Microbiota
|
journal
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November 2018 |
Interconnected microbiomes and resistomes in low-income human habitats
|
journal
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May 2016 |
The De Novo Transcriptome and Its Functional Annotation in the Seed Beetle Callosobruchus maculatus
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journal
|
July 2016 |
Analysis and correction of compositional bias in sparse sequencing count data
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posted_content
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January 2018 |
Diagnostic Potential and Interactive Dynamics of the Colorectal Cancer Virome
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journal
|
December 2018 |
Microbial community analysis using high-throughput sequencing technology: a beginner’s guide for microbiologists
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journal
|
February 2020 |
The Genetic Transformation of Chlamydia pneumoniae
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journal
|
October 2018 |
Transcriptomic characterization of the immunogenetic repertoires of heteromyid rodents
|
journal
|
January 2014 |
Functional sequencing read annotation for high precision microbiome analysis
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journal
|
November 2017 |
Maize pan-transcriptome provides novel insights into genome complexity and quantitative trait variation
|
journal
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January 2016 |
Estimation of DNA contamination and its sources in genotyped samples
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journal
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August 2019 |
Dietary Energy Level Promotes Rumen Microbial Protein Synthesis by Improving the Energy Productivity of the Ruminal Microbiome
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journal
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April 2019 |
Enhanced Water Demand Analysis via Symbolic Approximation within an Epidemiology-Based Forecasting Framework
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journal
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January 2019 |
Revealing the Biochemical and Genetic Basis of Color Variation in a Polymorphic Lizard
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journal
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April 2017 |
A microbiome case-control study of recurrent acute otitis media identified potentially protective bacterial genera
|
journal
|
February 2018 |
Three novel Pseudomonas phages isolated from composting provide insights into the evolution and diversity of tailed phages
|
journal
|
May 2017 |
Prevention, diagnosis and treatment of high-throughput sequencing data pathologies
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journal
|
March 2014 |
Sequence analysis of European maize inbred line F2 provides new insights into molecular and chromosomal characteristics of presence/absence variants
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journal
|
February 2018 |
Phenotypic and genotypic characterization of linezolid-resistant Enterococcus faecium from the USA and Pakistan
|
journal
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August 2019 |
A transcriptomic approach to study the effect of long-term starvation and diet composition on the expression of mitochondrial oxidative phosphorylation genes in gilthead sea bream (Sparus aurata)
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journal
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October 2017 |
Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea
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journal
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August 2017 |
Persistent metagenomic signatures of early-life hospitalization and antibiotic treatment in the infant gut microbiota and resistome
|
journal
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September 2019 |
Conducting metagenomic studies in microbiology and clinical research
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journal
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August 2018 |
Expression of eukaryotic-like protein in the microbiome of sponges
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journal
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January 2017 |
Novel findings to the biosynthetic pathway of magnoflorine and taspine through transcriptomic and metabolomic analysis of Croton draco (Euphorbiaceae)
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journal
|
December 2019 |
Oral administration of antibiotics increased the potential mobility of bacterial resistance genes in the gut of the fish Piaractus mesopotamicus
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journal
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February 2019 |
Pre- and post-sequencing recommendations for functional annotation of human fecal metagenomes
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journal
|
February 2020 |
The dynamics of the antibiotic resistome in the feces of freshly weaned pigs following therapeutic administration of oxytetracycline
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journal
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March 2019 |
Synergistic and antagonistic interactions between antibiotics and synbiotics in modifying the murine fecal microbiome
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journal
|
July 2019 |
Parallel evolution of storage roots in morning glories (Convolvulaceae)
|
journal
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May 2018 |
The neuroactive potential of the human gut microbiota in quality of life and depression
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journal
|
February 2019 |
Inter- and intra-specific genomic divergence in Drosophila montana shows evidence for cold adaptation
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posted_content
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January 2018 |
Microbial community diversity and physical–chemical features of the Southwestern Atlantic Ocean
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journal
|
September 2014 |
Genome Sequence of the Mosquitocidal Bacillus thuringiensis Strain BR58, a Biopesticide Product Effective against the Coffee Berry Borer ( Hypothenemus hampei )
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journal
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December 2015 |
Reduced microbial potential for the degradation of phenolic compounds in the rhizosphere of apple plantlets grown in soils affected by replant disease
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journal
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November 2019 |
A bioinformatics approach to identifying Wolbachia infections in arthropods
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journal
|
January 2018 |
Warm temperatures, cool sponges: the effect of increased temperatures on the Antarctic sponge Isodictya sp.
|
journal
|
January 2019 |
Phenotypically distinct human sequence is widespread in publicly archived microbial reads: an evaluation of methods for its detection
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posted_content
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January 2019 |
Divergent evolutionary trajectories following speciation in two ectoparasitic honey bee mites
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journal
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October 2019 |
Spatiotemporal dynamics of multidrug resistant bacteria on intensive care unit surfaces
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journal
|
October 2019 |
The draft genome sequence of the spider Dysdera silvatica (Araneae, Dysderidae): A valuable resource for functional and evolutionary genomic studies in chelicerates
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journal
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August 2019 |
Salmonella enterica serovar Kentucky recovered from human clinical cases in Maryland, USA (2011–2015)
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journal
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March 2019 |
A phenol/chloroform-free method to extract nucleic acids from recalcitrant, woody tropical species for gene expression and sequencing
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journal
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June 2019 |
Ontogenetic changes in embryonic and brain gene expression in progeny produced from migratory and resident Oncorhynchus mykiss
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journal
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April 2015 |
Low-Dose Pesticide Mixture Induces Accelerated Mesenchymal Stem Cell Aging In Vitro
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journal
|
April 2019 |
Sex Determination in Ceratopteris richardii Is Accompanied by Transcriptome Changes That Drive Epigenetic Reprogramming of the Young Gametophyte
|
journal
|
July 2018 |
Common Contaminants in Next-Generation Sequencing That Hinder Discovery of Low-Abundance Microbes
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journal
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May 2014 |
Genetic diversity and virulence profiles of Listeria monocytogenes recovered from bulk tank milk, milk filters, and milking equipment from dairies in the United States (2002 to 2014)
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journal
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May 2018 |
Clinical Insights from Metagenomic Analysis of Sputum Samples from Patients with Cystic Fibrosis
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journal
|
November 2013 |
Population structure of Neisseria gonorrhoeae based on whole genome data and its relationship with antibiotic resistance
|
journal
|
January 2015 |
Genotypic and Phenotypic Characterization of Antimicrobial Resistance in Neisseria gonorrhoeae: a Cross-Sectional Study of Isolates Recovered from Routine Urine Cultures in a High-Incidence Setting
|
journal
|
August 2019 |
Characterization of Wild and Captive Baboon Gut Microbiota and Their Antibiotic Resistomes
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journal
|
June 2018 |
Chromosome-specific sequencing reveals an extensive dispensable genome component in wheat
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journal
|
November 2016 |
Draft genome of the Arabidopsis thaliana phyllosphere bacterium, Williamsia sp. ARP1
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journal
|
January 2016 |
The Tritryps comparative repeatome: insights on repetitive element evolution in Trypanosomatid pathogens
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posted_content
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August 2018 |
A next generation approach to species delimitation reveals the role of hybridization in a cryptic species complex of corals
|
journal
|
June 2019 |
Thermal reactionomes reveal divergent responses to thermal extremes in warm and cool-climate ant species
|
journal
|
March 2016 |
Maturation of the infant microbiome community structure and function across multiple body sites and in relation to mode of delivery
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journal
|
January 2017 |
Lytic to temperate switching of viral communities
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journal
|
March 2016 |
Natural selection and the genetic basis of osmoregulation in heteromyid rodents as revealed by RNA-seq
|
journal
|
May 2014 |
Satellitome landscape analysis of Megaleporinus macrocephalus (Teleostei, Anostomidae) reveals intense accumulation of satellite sequences on the heteromorphic sex chromosome
|
journal
|
April 2019 |
A draft genome and transcriptome of common milkweed ( Asclepias syriaca ) as resources for evolutionary, ecological, and molecular studies in milkweeds and Apocynaceae
|
journal
|
January 2019 |
Genotyping of Plasmodiophora brassicae reveals the presence of distinct populations
|
journal
|
April 2018 |
Redefining the Human Oral Mycobiome with Improved Practices in Amplicon-based Taxonomy: Discovery of Malassezia as a Prominent Commensal
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journal
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March 2014 |
Extreme sensitivity to ultraviolet light in the fungal pathogen causing white-nose syndrome of bats
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journal
|
January 2018 |
Infant diet and maternal gestational weight gain predict early metabolic maturation of gut microbiomes
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journal
|
October 2018 |
A pan-transcriptome analysis shows that disease resistance genes have undergone more selection pressure during barley domestication
|
journal
|
January 2019 |
Classification of metagenomic sequences: methods and challenges
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journal
|
September 2012 |
Discovery of a Novel Periodontal Disease-Associated Bacterium
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journal
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June 2018 |
Seasonal dynamics of DNA and RNA viral bioaerosol communities in a daycare center
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journal
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April 2019 |
Mechanistic Model of Rothia mucilaginosa Adaptation toward Persistence in the CF Lung, Based on a Genome Reconstructed from Metagenomic Data
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journal
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May 2013 |
Prevalence and Implications of Contamination in Public Genomic Resources: A Case Study of 43 Reference Arthropod Assemblies
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journal
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December 2019 |
MetLab: An In Silico Experimental Design, Simulation and Analysis Tool for Viral Metagenomics Studies
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journal
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August 2016 |
Comparative Genomics of Antibiotic-Resistant Uropathogens Implicates Three Routes for Recurrence of Urinary Tract Infections
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journal
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August 2019 |
Contaminations in (meta)genome data: An open issue for the scientific community
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journal
|
October 2019 |
Erratum: Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea
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journal
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July 2018 |
Position-dependent termination and widespread obligatory frameshifting in Euplotes translation
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journal
|
November 2016 |
High-throughput analysis unveils a highly shared satellite DNA library among three species of fish genus Astyanax
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journal
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October 2017 |
Fermentation products in the cystic fibrosis airways induce aggregation and dormancy-associated expression profiles in a CF clinical isolate of Pseudomonas aeruginosa
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journal
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March 2018 |
Inter and Intraspecific Genomic Divergence in Drosophila montana Shows Evidence for Cold Adaptation
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journal
|
July 2018 |
Transcriptomic and Metabolomic Reprogramming from Roots to Haustoria in the Parasitic Plant, Thesium chinense
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journal
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December 2017 |
A next generation approach to species delimitation reveals the role of hybridization in a cryptic species complex of corals: Supplemental Data
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journal
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January 2019 |
Genome Sequences of 30 Escherichia coli O157:H7 Isolates Recovered from a Single Dairy Farm and Its Associated Off-Site Heifer-Raising Facility
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journal
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August 2017 |
Draft Genome Sequence of a Salmonella enterica Serovar Typhi Strain Resistant to Fourth-Generation Cephalosporin and Fluoroquinolone Antibiotics
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journal
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October 2017 |
Draft Genome Sequence of
Marinobacter
sp. Strain P4B1, an Electrogenic Perchlorate-Reducing Strain Isolated from a Long-Term Mixed Enrichment Culture of Marine Bacteria
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journal
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February 2016 |
Genome Sequences of Four Nonhuman/Nonclinical Salmonella enterica Serovar Kentucky ST198 Isolates Recovered between 1972 and 1973
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journal
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March 2017 |
Towards standardization of next-generation sequencing of FFPE samples for clinical oncology: intrinsic obstacles and possible solutions
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journal
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January 2017 |
Evolution at two time frames: Polymorphisms from an ancient singular divergence event fuel contemporary parallel evolution
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journal
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November 2018 |
Unraveling the genetic diversity and phylogeny of Leishmania RNA virus 1 strains of infected Leishmania isolates circulating in French Guiana
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journal
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July 2017 |
QC-Chain: Fast and Holistic Quality Control Method for Next-Generation Sequencing Data
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journal
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April 2013 |
Development of Reference Transcriptomes for the Major Field Insect Pests of Cowpea: A Toolbox for Insect Pest Management Approaches in West Africa
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journal
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November 2013 |
Inferring Intra-Community Microbial Interaction Patterns from Metagenomic Datasets Using Associative Rule Mining Techniques
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journal
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April 2016 |
Genomic and Evolutionary Analysis of Two Salmonella enterica Serovar Kentucky Sequence Types Isolated from Bovine and Poultry Sources in North America
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journal
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October 2016 |
Challenges in the culture-independent analysis of oral and respiratory samples from intubated patients
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journal
|
May 2014 |
Quality control of next-generation sequencing data without a reference
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journal
|
May 2014 |
Separating Putative Pathogens from Background Contamination with Principal Orthogonal Decomposition: Evidence for Leptospira in the Ugandan Neonatal Septisome
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journal
|
June 2016 |
Multidimensional metrics for estimating phage abundance, distribution, gene density, and sequence coverage in metagenomes
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journal
|
May 2015 |
Expanding our Understanding of the Seaweed Holobiont: RNA Viruses of the Red Alga Delisea pulchra
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journal
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January 2016 |
The Human Virome Protein Cluster Database (HVPC): A Human Viral Metagenomic Database for Diversity and Function Annotation
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journal
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May 2018 |
Purifying the Impure: Sequencing Metagenomes and Metatranscriptomes from Complex Animal-associated Samples
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journal
|
December 2014 |
Genetic characterization of human herpesvirus type 1: Full-length genome sequence of strain obtained from an encephalitis case from India
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journal
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January 2016 |
A Microbial Metagenome (Leucobactersp.) inCaenorhabditisWhole Genome Sequences
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journal
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January 2013 |
GenomePeek—an online tool for prokaryotic genome and metagenome analysis
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journal
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January 2015 |
Short reads from honey bee (Apis sp.) sequencing projects reflect microbial associate diversity
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journal
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July 2017 |