RNAcentral: A comprehensive database of non-coding RNA sequences

Williams, Kelly Porter; Lau, Britney Yan

doi:10.1093/nar/gkw1008

Title: RNAcentral: A comprehensive database of non-coding RNA sequences

Journal Article · Fri Oct 28 00:00:00 EDT 2016 · Nucleic Acids Research

DOI:https://doi.org/10.1093/nar/gkw1008· OSTI ID:1343623

Williams, Kelly Porter ^[1]; Lau, Britney Yan ^[1]

Sandia National Lab. (SNL-CA), Livermore, CA (United States)

RNAcentral is a database of non-coding RNA (ncRNA) sequences that aggregates data from specialised ncRNA resources and provides a single entry point for accessing ncRNA sequences of all ncRNA types from all organisms. Since its launch in 2014, RNAcentral has integrated twelve new resources, taking the total number of collaborating database to 22, and began importing new types of data, such as modified nucleotides from MODOMICS and PDB. We created new species-specific identifiers that refer to unique RNA sequences within a context of single species. Furthermore, the website has been subject to continuous improvements focusing on text and sequence similarity searches as well as genome browsing functionality.

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Research Organization:: Sandia National Lab. (SNL-CA), Livermore, CA (United States)

Sponsoring Organization:: USDOE National Nuclear Security Administration (NNSA)

Contributing Organization:: The RNAcentral Consortium

Grant/Contract Number:: AC04-94AL85000

OSTI ID:: 1343623

Report Number(s):: SAND-2017-0752J; 650681; TRN: US1701317

Journal Information:: Nucleic Acids Research, Vol. 45, Issue D1; ISSN 0305-1048

Publisher:: Oxford University PressCopyright Statement

Country of Publication:: United States

Language:: English

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Cited by: 111 works

Citation information provided by
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