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Title: Global sensitivity analysis, probabilistic calibration, and predictive assessment for the data assimilation linked ecosystem carbon model

Journal Article · · Geoscientific Model Development (Online)
 [1];  [2];  [1];  [1];  [1];  [3];  [2]
  1. Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)
  2. Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)
  3. Univ. of Edinburgh, Scotland (United Kingdom)

In this paper we propose a probabilistic framework for an uncertainty quantification (UQ) study of a carbon cycle model and focus on the comparison between steady-state and transient simulation setups. A global sensitivity analysis (GSA) study indicates the parameters and parameter couplings that are important at different times of the year for quantities of interest (QoIs) obtained with the data assimilation linked ecosystem carbon (DALEC) model. We then employ a Bayesian approach and a statistical model error term to calibrate the parameters of DALEC using net ecosystem exchange (NEE) observations at the Harvard Forest site. The calibration results are employed in the second part of the paper to assess the predictive skill of the model via posterior predictive checks.

Research Organization:
Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States)
Sponsoring Organization:
USDOE Office of Science (SC)
Grant/Contract Number:
AC05-00OR22725
OSTI ID:
1335322
Journal Information:
Geoscientific Model Development (Online), Vol. 8, Issue 7; ISSN 1991-9603
Publisher:
European Geosciences UnionCopyright Statement
Country of Publication:
United States
Language:
English
Citation Metrics:
Cited by: 21 works
Citation information provided by
Web of Science

References (35)

Estimating diurnal to annual ecosystem parameters by synthesis of a carbon flux model with eddy covariance net ecosystem exchange observations journal February 2005
The REFLEX project: Comparing different algorithms and implementations for the inversion of a terrestrial ecosystem model against eddy covariance data journal October 2009
Soil carbon cycling in a temperate forest: radiocarbon-based estimates of residence times, sequestration rates and partitioning of fluxes journal January 2000
Markov Chain Monte Carlo in Practice book December 1995
Strictly Proper Scoring Rules, Prediction, and Estimation journal March 2007
An Adaptive Metropolis Algorithm journal April 2001
Decomposition of the Continuous Ranked Probability Score for Ensemble Prediction Systems journal October 2000
The use of CO2 flux time series for parameter and carbon stock estimation in carbon cycle research journal September 2011
Assimilating atmospheric data into a terrestrial biosphere model: A case study of the seasonal cycle: ASSIMILATING CO journal October 2002
Consistent assimilation of MERIS FAPAR and atmospheric CO 2 into a terrestrial vegetation model and interactive mission benefit analysis journal January 2012
Markov Chain Monte Carlo in Practice: A Roundtable Discussion journal May 1998
Inversion of terrestrial ecosystem model parameter values against eddy covariance measurements by Monte Carlo sampling journal August 2005
Estimation of global sensitivity indices for models with dependent variables journal April 2012
Constraining a global ecosystem model with multi-site eddy-covariance data journal January 2012
Facilitating feedbacks between field measurements and ecosystem models journal May 2013
Bayesian Posterior Predictive Checks for Complex Models journal February 2004
Comparing observations and process-based simulations of biosphere-atmosphere exchanges on multiple timescales: MODEL EVALUATION ON MULTIPLE TIMESCALES journal April 2010
Towards a standardized processing of Net Ecosystem Exchange measured with eddy covariance technique: algorithms and uncertainty estimation journal January 2006
Two decades of terrestrial carbon fluxes from a carbon cycle data assimilation system (CCDAS): CARBON FLUXES FROM DATA ASSIMILATION SYSTEM journal June 2005
A Bayesian calibration of a simple carbon cycle model: The role of observations in estimating and reducing uncertainty: BAYESIAN CARBON CYCLE MODEL CALIBRATION journal June 2008
Parameter and prediction uncertainty in an optimized terrestrial carbon cycle model: Effects of constraining variables and data record length journal January 2011
Terrestrial biosphere models need better representation of vegetation phenology: results from the North American Carbon Program Site Synthesis journal November 2011
Making best use of model evaluations to compute sensitivity indices journal May 2002
Dimensionality Reduction for Complex Models via Bayesian Compressive Sensing journal January 2014
Measuring and testing dependence by correlation of distances journal December 2007
A global sensitivity analysis and Bayesian inference framework for improving the parameter estimation and prediction of a process-based Terrestrial Ecosystem Model journal January 2009
Influence of carbon-nitrogen cycle coupling on land model response to CO 2 fertilization and climate variability : INFLUENCE OF CARBON-NITROGEN COUPLING journal December 2007
Assimilation of seasonal chlorophyll and nutrient data into an adjoint three-dimensional ocean carbon cycle model: Sensitivity analysis and ecosystem parameter optimization: ECOSYSTEM PARAMETER OPTIMIZATION journal January 2007
OptIC project: An intercomparison of optimization techniques for parameter estimation in terrestrial biogeochemical models journal January 2007
Factors controlling CO 2 exchange on timescales from hourly to decadal at Harvard Forest journal January 2007
Modelling the soil-plant-atmosphere continuum in a Quercus-Acer stand at Harvard Forest: the regulation of stomatal conductance by light, nitrogen and soil/plant hydraulic properties journal August 1996
An improved analysis of forest carbon dynamics using data assimilation journal January 2005
Probabilistic inversion of a terrestrial ecosystem model: Analysis of uncertainty in parameter estimation and model prediction: PROBABILISTIC INVERSION OF TERRESTRIAL ECOSYSTEM journal May 2006
On the capability of Monte Carlo and adjoint inversion techniques to derive posterior parameter uncertainties in terrestrial ecosystem models: COMPARISON OF INVERSION TECHNIQUES journal September 2012
A primer for data assimilation with ecological models using Markov Chain Monte Carlo (MCMC) journal August 2011

Cited By (7)

Shifts in national land use and food production in Great Britain after a climate tipping point journal January 2020
Assessing the ecological vulnerability of the upper reaches of the Minjiang River journal July 2017
Applying a Global Sensitivity Analysis Workflow to Improve the Computational Efficiencies in Physiologically-Based Pharmacokinetic Modeling journal June 2018
Evaluation and uncertainty analysis of regional-scale CLM4.5 net carbon flux estimates journal January 2018
On the effect of model parameters on forecast objects journal January 2018
What should we do when a model crashes? Recommendations for global sensitivity analysis of Earth and environmental systems models journal January 2019
On the Effect of Model Parameters on Forecast Objects journal November 2017

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