Cellulolytic potential under environmental changes in microbial communities from grassland litter

Berlemont, Renaud; Allison, Steven D.; Weihe, Claudia; Lu, Ying; Brodie, Eoin L.; Martiny, Jennifer B.  H.; Martiny, Adam C.

doi:10.3389/fmicb.2014.00639

Title: Cellulolytic potential under environmental changes in microbial communities from grassland litter

Journal Article · Tue Nov 25 00:00:00 EST 2014 · Frontiers in Microbiology

DOI:https://doi.org/10.3389/fmicb.2014.00639· OSTI ID:1254001

Berlemont, Renaud ^[1]; Allison, Steven D. ^[2]; Weihe, Claudia ^[3]; Lu, Ying ^[3]; Brodie, Eoin L. ^[4]; Martiny, Jennifer B. H. ^[3]; Martiny, Adam C. ^[2]

Univ. of California, Irvine, CA (United States). Dept. of Earth System Science; California State Univ. (CalState), Long Beach, CA (United States)
Univ. of California, Irvine, CA (United States). Dept. of Earth System Science; Univ. of California, Irvine, CA (United States). Dept. of Ecology and Evolutionary Biology
Univ. of California, Irvine, CA (United States). Dept. of Ecology and Evolutionary Biology
Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States). Earth Sciences Division; Univ. of California, Berkeley, CA (United States). Dept. of Environmental Science

We report that in many ecosystems, global changes are likely to profoundly affect microorganisms. In Southern California, changes in precipitation and nitrogen deposition may influence the composition and functional potential of microbial communities and their resulting ability to degrade plant material. To test whether such environmental changes impact the distribution of functional groups involved in leaf litter degradation, we determined how the genomic diversity of microbial communities in a semi-arid grassland ecosystem changed under reduced precipitation or increased N deposition. We monitored communities seasonally over a period of 2 years to place environmental change responses into the context of natural variation. Fungal and bacterial communities displayed strong seasonal patterns, Fungi being mostly detected during the dry season whereas Bacteria were common during wet periods. Most putative cellulose degraders were associated with 33 bacterial genera and predicted to constitute 18% of the microbial community. Precipitation reduction reduced bacterial abundance and cellulolytic potential whereas nitrogen addition did not affect the cellulolytic potential of the microbial community. Finally, we detected a strong correlation between the frequencies of genera of putative cellulose degraders and cellulase genes. Thus, microbial taxonomic composition was predictive of cellulolytic potential. This work provides a framework for how environmental changes affect microorganisms responsible for plant litter deconstruction.

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Research Organization:: University of California, Berkeley, CA (United States); Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)

Sponsoring Organization:: USDOE Office of Science (SC), Biological and Environmental Research (BER)

Grant/Contract Number:: PS02-09ER09-25; OCE-1046297

OSTI ID:: 1254001

Alternate ID(s):: OSTI ID: 1256963

Journal Information:: Frontiers in Microbiology, Vol. 5; ISSN 1664-302X

Publisher:: Frontiers Research FoundationCopyright Statement

Country of Publication:: United States

Language:: English

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Cited by: 53 works

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60 APPLIED LIFE SCIENCES
cellulase
metagenomics
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global change
microbial community composition
54 ENVIRONMENTAL SCIENCES
leaflitter

Title: Cellulolytic potential under environmental changes in microbial communities from grassland litter

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